# terms

id: FYPO:0005039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:22144909","GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during nitrogen starvation","termid":"FYPO:0005034"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen depletion","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II CTD serine 2 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005039"}


id: PBO:0111932
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0111932"}


id: GO:2000975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"positively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-B cell differentiation","synonyms":[{"name":"positive regulation of pro-B cell development","type":"related"},{"name":"positive regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000975"}


id: PBO:0064999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 6","termid":"PBO:0064999"}


id: PBO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized low density lipoprotein receptor 1","termid":"PBO:0061864"}


id: GO:0023022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling process in which T cell signal transduction is brought to an end rather than being reversibly modulated.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of signal transduction","termid":"GO:0023021"},{"relation_name":"is_a","term_name":"negative regulation of T cell receptor signaling pathway","termid":"GO:0050860"},{"relation_name":"part_of","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"termination of T cell signal transduction","termid":"GO:0023022"}


id: PBO:0047800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box I3","termid":"PBO:0047800"}


id: GO:0048556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the microsporocyte. The microsporocyte is a diploid cell in which meiosis will occur, resulting in four microspores. A microspore is a spore that, in vascular plants, gives rise to a male gametophyte.","definition_xrefs":["ISBN:047186840X","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"microsporocyte nucleus","secondary_identifiers":["GO:0043074"],"synonyms":[{"name":"microspore mother cell nucleus","type":"exact"},{"name":"pollen mother cell nucleus","type":"exact"}],"termid":"GO:0048556"}


id: PBO:0065597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 13","termid":"PBO:0065597"}


id: PBO:0011151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0011151"}


id: GO:1904807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein oxidation.","definition_xrefs":["GOC:TermGenie","PMID:22719267","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein oxidation","termid":"GO:1904806"},{"relation_name":"negatively_regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein oxidation","synonyms":[{"name":"down regulation of protein amino acid oxidation","type":"exact"},{"name":"down regulation of protein oxidation","type":"exact"},{"name":"down-regulation of protein amino acid oxidation","type":"exact"},{"name":"down-regulation of protein oxidation","type":"exact"},{"name":"downregulation of protein amino acid oxidation","type":"exact"},{"name":"downregulation of protein oxidation","type":"exact"},{"name":"inhibition of protein amino acid oxidation","type":"narrow"},{"name":"inhibition of protein oxidation","type":"narrow"},{"name":"negative regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904807"}


id: GO:0033083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immature T cell proliferation","termid":"GO:0033083"}


id: GO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + ATP + bicarbonate = ADP + 2 H+ + oxalosuccinate + phosphate.","definition_xrefs":["RHEA:20425","EC:6.4.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxoglutarate carboxylase activity","secondary_identifiers":["KEGG_REACTION:R08201","MetaCyc:RXN-8457"],"synonyms":[{"name":"CFI","type":"related"},{"name":"OGC","type":"related"},{"name":"carboxylating factor for ICDH","type":"related"},{"name":"oxalosuccinate synthetase activity","type":"related"}],"termid":"GO:0034029"}


id: GO:2001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanopterin-containing compound metabolic process","synonyms":[{"name":"methanopterin metabolism","type":"exact"}],"termid":"GO:2001115"}


id: PBO:0065475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD12 pseudogene 1","termid":"PBO:0065475"}


id: PBO:0054183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1558","termid":"PBO:0054183"}


id: PBO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 3","termid":"PBO:0048803"}


id: FYPO:0006386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that normally localizes to a compact region at the tip of a shmoo, or mating projection, is more dispersed than normal.","definition_xrefs":["PomBase:mah","PMID:19627505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"protein abnormally dispersed at shmoo tip","synonyms":[{"name":"abnormally dispersed protein localization at shmoo tip","type":"exact"},{"name":"protein abnormally dispersed at mating projection tip","type":"exact"},{"name":"protein abnormally dispersed at shmoo projection","type":"related"}],"termid":"FYPO:0006386"}


id: PBO:0004695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Ssn6","termid":"PBO:0004695"}


id: PBO:0029009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere_outer_repeat","termid":"PBO:0029009"}


id: GO:0047955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + glycerol = AH(2) + glycerone.","definition_xrefs":["EC:1.1.99.22","RHEA:17493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol dehydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:GLYCEROL-DEHYDROGENASE-ACCEPTOR-RXN","KEGG_REACTION:R01045"],"synonyms":[{"name":"glycerol:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"glycerol:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047955"}


id: SO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which changes polypeptide functioning with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_function_variant","synonyms":[{"name":"polypeptide function variant","type":"exact"}],"termid":"SO:0001554"}


id: PBO:0079799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B10","termid":"PBO:0079799"}


id: PBO:0080382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS13A antisense RNA 1","termid":"PBO:0080382"}


id: FYECO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which guanosine triphosphate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ GTP","synonyms":[{"name":"+ guanosine triphosphate","type":"exact"}],"termid":"FYECO:0000115"}


id: FYPO:0001482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity does not increase as a result of a heat stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to heat","termid":"FYPO:0000212"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000707","FYPO:0000654","FYPO:0005447","FYPO:0000661","FYPO:0000298","FYPO:0000652"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity increase abolished during cellular response to heat","synonyms":[{"name":"absent increase in trehalase activity in response to high temperature","type":"exact"},{"name":"neutral trehalase activity increase abolished during cellular response to heat","type":"exact"},{"name":"trehalase activity increase abolished during cellular response to heat","type":"broad"}],"termid":"FYPO:0001482"}


id: PR:Q9P7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap62 gene.","definition_xrefs":["UniProtKB:Q9P7L8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.05","synonyms":[{"name":"Spom972h-sap62","type":"exact"},{"name":"spliceosome-associated protein 62 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L8"}


id: PBO:0077403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 138","termid":"PBO:0077403"}


id: MOD:01157
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115208,115210,115442,115443,115207,115209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification considered either as modified amino acid residues derived from natural amino acids, as a replacement by another natural amino acid, or as a replacement by an unnatural amino acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by amino acid modified","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"termid":"MOD:01157","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that is a short, rounded projection from a plant epidermal cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plant cell papilla","termid":"GO:0090395"}


id: GO:0032408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutSbeta mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MutSbeta complex binding","termid":"GO:0032408"}


id: GO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A SWI/SNF-type complex that directly interacts with the vitamin D receptor (VDR) through the Williams syndrome transcription factor (WSTF), and mediates the recruitment of unliganded VDR to VDR target sites in promoters. The WINAC complex contains at least 13 subunits, including WSTF, several SWI/SNF components, and DNA replication-related factors.","definition_xrefs":["GOC:BHF","PMID:12837248"],"gene_count":0,"genotype_count":0,"name":"obsolete WINAC complex (obsolete GO:0071778)","synonyms":[{"name":"WINAC complex","type":"exact"}],"termid":"GO:0071778"}


id: PBO:0073613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase family member 3","termid":"PBO:0073613"}


id: GO:0042083
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004799"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to an acceptor molecule; dependent on the presence of 5,10-methylenetetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"5,10-methylenetetrahydrofolate-dependent methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042083","terms_by_termid":{"GO:0004799":null}}


id: GO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 ferricytochrome c + nitrous oxide = 2 H+ + 2 ferrocytochrome c + 2 nitric oxide.","definition_xrefs":["EC:1.7.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitric oxide reductase activity","secondary_identifiers":["MetaCyc:NITRIC-OXIDE-REDUCTASE-RXN","RHEA:30211","KEGG_REACTION:R00294","GO:0016967","GO:0016968"],"synonyms":[{"name":"CYP55","type":"narrow"},{"name":"P450 nitric oxide reductase activity","type":"narrow"},{"name":"P450nor","type":"narrow"},{"name":"cytochrome bc nitric oxide reductase activity","type":"narrow"},{"name":"nitric-oxide reductase activity","type":"related"},{"name":"nitrogen oxide reductase activity","type":"related"},{"name":"nitrous-oxide:(acceptor) oxidoreductase (NO-forming)","type":"related"},{"name":"nitrous-oxide:acceptor oxidoreductase (NO-forming)","type":"related"}],"termid":"GO:0016966"}


id: PBO:0072066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 4","termid":"PBO:0072066"}


id: GO:0008305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands.","definition_xrefs":["PMID:17543136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell adhesion","termid":"GO:0098636"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin complex","synonyms":[{"name":"laminin receptor protein","type":"related"}],"termid":"GO:0008305"}


id: PBO:0029286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_Mmi1_focus","termid":"PBO:0029286"}


id: PBO:0081051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 9","termid":"PBO:0081051"}


id: GO:1903279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:19683723","GO_REF:0000059","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium:sodium antiporter activity","synonyms":[{"name":"regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"regulation of sodium/calcium exchanger","type":"exact"},{"name":"regulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903279"}


id: PBO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 2","termid":"PBO:0060986"}


id: GO:0004005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane cation-transporting ATPase (obsolete GO:0004005)","synonyms":[{"name":"plasma membrane cation-transporting ATPase","type":"exact"}],"termid":"GO:0004005"}


id: GO:0008667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate + NAD+ = 2,3-dihydroxybenzoate + H+ + NADH.","definition_xrefs":["RHEA:23824","EC:1.3.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity","secondary_identifiers":["MetaCyc:DHBDEHYD-RXN","KEGG_REACTION:R01505"],"synonyms":[{"name":"2,3-DHB dehydrogenase activity","type":"related"},{"name":"2,3-dihydro-2,3-dihydroxybenzoate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008667"}


id: GO:0060292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates synaptic plasticity such that synapses are changed resulting in the decrease in the rate, or frequency of synaptic transmission at the synapse.","definition_xrefs":["GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"long-term synaptic depression","synonyms":[{"name":"LTD","type":"related"},{"name":"long term depression","type":"broad"},{"name":"long term synaptic depression","type":"exact"}],"termid":"GO:0060292"}


id: FYPO:0003810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which  mitochondria are smaller and more numerous than normal. Total mitochondrial volume is usually similar to normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"has_part","term_name":"mitochondria present in increased numbers","termid":"FYPO:0007194"},{"relation_name":"has_part","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"},{"relation_name":"is_a","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"is_a","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000257"],"is_obsolete":false,"name":"small fragmented mitochondria present in increased numbers","synonyms":[{"name":"fragmented mitochondria","type":"related"},{"name":"small mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"small mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003810"}


id: PBO:0028756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028756"}


id: PBO:0088387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein, Tsc2 paralog","termid":"PBO:0088387"}


id: _global:results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","secondary_identifiers":["RO:0002356","GOREL:0001021"],"termid":"_global:results_in_specification_of"}


id: RO:HOM0000024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a duplication preceding a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_out-paralogy_relationship_with","synonyms":[{"name":"outparalogy","type":"exact"},{"name":"out-paralogous to","type":"exact"},{"name":"alloparalogy","type":"exact"}],"termid":"RO:HOM0000024"}


id: GO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of apoptosis in the bitten organism.","definition_xrefs":["GOC:jl","PMID:17983639","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of apoptotic process in another organism (obsolete GO:0044534)","synonyms":[{"name":"envenomation resulting in modulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044534"}


id: GO:0018773
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102818],"is_not":false,"summary":null,"term":"GO:0018773"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylpyruvate + H2O = acetate + H+ + pyruvate.","definition_xrefs":["EC:3.7.1.6","RHEA:16097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acetylpyruvate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00324","UM-BBD_reactionID:r0095","MetaCyc:ACETYLPYRUVATE-HYDROLASE-RXN"],"synonyms":[{"name":"2,4-dioxopentanoate acetylhydrolase activity","type":"related"}],"termid":"GO:0018773","terms_by_termid":{"GO:0018773":null}}


id: PBO:0068702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 83, pseudogene","termid":"PBO:0068702"}


id: GO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh","PMID:12044938"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species (obsolete GO:0001315)","synonyms":[{"name":"age-dependent response to AOS","type":"exact"},{"name":"age-dependent response to ROI","type":"exact"},{"name":"age-dependent response to ROS","type":"exact"},{"name":"age-dependent response to active oxygen species","type":"exact"},{"name":"age-dependent response to reactive oxidative species","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0001315"}


id: SO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting element found in the 3' UTR of some mRNA which is rich in AUUUA pentamers. Messenger RNAs bearing multiple AU-rich elements are often unstable.","definition_xrefs":["PMID:7892223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AU_rich_element","secondary_identifiers":["http://en.wikipedia.org/wiki/AU-rich_element"],"synonyms":[{"name":"ARE","type":"related"},{"name":"AU rich element","type":"exact"},{"name":"AU-rich element","type":"exact"}],"termid":"SO:0001180"}


id: PBO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 5","termid":"PBO:0045326"}


id: GO:0099150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic specialization assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"}


id: FYPO:0006250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is abnormal. All tRNAs aminoacylation may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["PomBase:mah","GO:0006418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abnormal tRNA aminoacylation","synonyms":[{"name":"abnormal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"abnormal tRNA aminoacylation for protein translation","type":"exact"},{"name":"abnormal tRNA charging","type":"narrow"}],"termid":"FYPO:0006250"}


id: PBO:0064998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 5","termid":"PBO:0064998"}


id: GO:1903826
data:
  {"annotated_genes":["SJAG_02716","SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62767,94882],"is_not":false,"summary":null,"term":"GO:1903826"},{"annotations":[99891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","PMID:18357653","PMID:22822152","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-arginine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1902023","GO:1903400","GO:0015809","GO:0043091"],"synonyms":[{"name":"L-arginine import","type":"narrow"},{"name":"L-arginine transport","type":"broad"},{"name":"L-arginine uptake","type":"narrow"},{"name":"arginine transmembrane transport","type":"related"},{"name":"arginine transport","type":"broad"}],"termid":"GO:1903826","terms_by_termid":{"GO:0090518":null,"GO:1903826":null}}


id: GO:0035351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transport","termid":"GO:0015886"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"heme transmembrane transport","synonyms":[{"name":"heme membrane transport","type":"exact"}],"termid":"GO:0035351"}


id: PBO:0087860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in regulating lysine biosynthesis; involved in the regulation of genes of the lysine biosynthesis pathway; requires 2-aminoadipate semialdehyde as co-inducer","termid":"PBO:0087860"}


id: GO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of T/G mismatches arising from deamination of 5-methylcytosine in DNA by nicking double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the mismatched thymidine residue. The incision is mismatch-dependent and strand-specific, in favor of the G-containing strand. The incision serves as a starting point for subsequent excision repair by DNA polymerase I, which excises thymidine and reinserts cytidine.","definition_xrefs":["PMID:17651368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"T/G mismatch-specific endonuclease activity","synonyms":[{"name":"DNA mismatch endonuclease","type":"broad"},{"name":"V.EcoKDcm","type":"related"},{"name":"Vsr mismatch endonuclease","type":"related"},{"name":"very short patch repair protein","type":"related"}],"termid":"GO:0043765"}


id: PBO:0051600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 receptor","termid":"PBO:0051600"}


id: PBO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AD member 1 pseudogene","termid":"PBO:0061964"}


id: GO:0031400
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein modification process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"down regulation of protein modification","type":"exact"},{"name":"down-regulation of protein modification","type":"exact"},{"name":"downregulation of protein modification","type":"exact"},{"name":"inhibition of protein modification","type":"narrow"}],"termid":"GO:0031400","terms_by_termid":{"GO:0033234":null}}


id: PR:O94624
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim54 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.04","synonyms":[{"name":"Spom972h-tim54","type":"exact"}],"termid":"PR:O94624"}


id: PBO:0050033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 1","termid":"PBO:0050033"}


id: GO:0046029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-mannose + H+ + NADH.","definition_xrefs":["RHEA:15029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannitol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07135","MetaCyc:1.1.1.255-RXN","EC:1.1.1.255"],"synonyms":[{"name":"MTD activity","type":"related"},{"name":"NAD-dependent mannitol dehydrogenase activity","type":"broad"},{"name":"mannitol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0046029"}


id: SO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 histone protein is di-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K4_methylation_site","termid":"SO:0001734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_dimethylation_site","synonyms":[{"name":"H3K4 di-methylation site","type":"exact"},{"name":"H3K4Me2","type":"related"}],"termid":"SO:0001725"}


id: PBO:0077404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 139","termid":"PBO:0077404"}


id: PBO:0078389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-4","termid":"PBO:0078389"}


id: PBO:0060701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 pseudogene 1","termid":"PBO:0060701"}


id: GO:0060539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the diaphragm over time from its initial formation to the mature structure. The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle organ development","termid":"GO:0060538"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm development","termid":"GO:0060539"}


id: PBO:0072001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 3","termid":"PBO:0072001"}


id: GO:0061464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a cell-substrate junction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of cell-substrate junction (obsolete GO:0061464)","termid":"GO:0061464"}


id: GO:1902859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionyl-CoA.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie","PMID:15514053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006629","GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"propionyl-CoA catabolic process","synonyms":[{"name":"propionyl-CoA breakdown","type":"exact"},{"name":"propionyl-CoA catabolism","type":"exact"},{"name":"propionyl-CoA degradation","type":"exact"}],"termid":"GO:1902859"}


id: PBO:0056409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF6 divergent transcript","termid":"PBO:0056409"}


id: PBO:0041575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 62","termid":"PBO:0041575"}


id: PBO:0082909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulfurase (Nfs1p) activator; essential for the formation of the persulfide intermediate at the desulfurase active site during pyridoxal phosphate-dependent desulfuration of cysteine; required for mitochondrial iron-sulfur cluster biosynthesis; exclusive to eukaryotes, implicated as eukaryotic supplement to the bacterium-derived Fe-S cluster (ISC) assembly apparatus; involved in regulation of iron metabolism; member of the LYR protein family","termid":"PBO:0082909"}


id: FYPO:0001776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to eisosome filament","synonyms":[{"name":"normal protein localisation to eisosome filament","type":"exact"},{"name":"normal protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"normal protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"normal protein localization to linear eisosome","type":"exact"}],"termid":"FYPO:0001776"}


id: GO:0015182
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98858,106070],"is_not":false,"summary":null,"term":"GO:0015182"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-asparagine from one side of a membrane to the other. L-asparagine is the L-enantiomer of alpha-aminosuccinamic acid.","definition_xrefs":["ISBN:0815340729","GOC:jsg","GOC:mtg_transport","ISBN:0198506732","GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-asparagine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-asparagine transporter activity","type":"broad"},{"name":"asparagine/glutamine permease activity","type":"narrow"}],"termid":"GO:0015182","terms_by_termid":{"GO:0015182":null}}


id: GO:0061595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 6-deoxy-6-sulfofructose-1-phosphate = 3-sulfolactaldehyde + dihydroxyacetone phosphate.","definition_xrefs":["PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-deoxy-6-sulfofructose-1-phosphate aldolase activity","termid":"GO:0061595"}


id: PBO:0028760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level","termid":"PBO:0028760"}


id: GO:0052839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + inositol diphosphate tetrakisphosphate = ADP + inositol bisdiphosphate trisphosphate.","definition_xrefs":["PMID:10827188","PMID:11502751","PMID:18355727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-1855230","Reactome:R-HSA-1855193"],"termid":"GO:0052839"}


id: PR:P49731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03891","PANTHER:PTHR11630:SF43","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.04c","secondary_identifiers":["UniProtKB:P49731"],"synonyms":[{"name":"Spom972h-MCM6","type":"exact"},{"name":"minichromosome maintenance protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P49731"}


id: GO:0018333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-threonine to form O-phospho-L-threonine.","definition_xrefs":["RESID:AA0038"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-phospho-L-threonine (obsolete GO:0018333)","termid":"GO:0018333"}


id: PBO:0038663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase bubblegum family member 2","termid":"PBO:0038663"}


id: PBO:0014273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUppressor of Cdc2 ts-mutations","termid":"PBO:0014273"}


id: PBO:0066323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and CCCH-type domains 1","termid":"PBO:0066323"}


id: PBO:0057980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3907","termid":"PBO:0057980"}


id: PBO:0071705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 3","termid":"PBO:0071705"}


id: PBO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 4","termid":"PBO:0051674"}


id: PR:O42938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 6-phosphofructokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.02","synonyms":[{"name":"ATP-PFK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphofructokinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphohexokinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pfk1","type":"exact"}],"termid":"PR:O42938"}


id: PBO:0041819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac mesoderm enhancer-associated non-coding RNA","termid":"PBO:0041819"}


id: PR:Q9P7E3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SAM decarboxylase proenzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase proenzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.05c","secondary_identifiers":["UniProtKB:Q9P7E3"],"synonyms":[{"name":"AdoMetDC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAMDC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMD1","type":"exact"}],"termid":"PR:Q9P7E3"}


id: GO:0018943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organotin, an organic compound containing a tin atom.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organometal metabolic process","termid":"GO:0018942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organotin metabolic process","synonyms":[{"name":"organotin metabolism","type":"exact"}],"termid":"GO:0018943"}


id: GO:0030754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 5,7,4'-trihydroxyflavone = S-adenosyl-L-homocysteine + 4'-methoxy-5,7-dihydroxyflavone.","definition_xrefs":["EC:2.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"apigenin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:APIGENIN-4-O-METHYLTRANSFERASE-RXN","RHEA:20429"],"synonyms":[{"name":"S-adenosyl-L-methionine:5,7,4'-trihydroxyflavone 4'-O-methyltransferase activity","type":"related"},{"name":"flavonoid O-methyltransferase activity","type":"broad"},{"name":"flavonoid methyltransferase activity","type":"related"}],"termid":"GO:0030754"}


id: GO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetate + diphosphate = acetyl phosphate + phosphate.","definition_xrefs":["EC:2.7.2.12","RHEA:24276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"acetate kinase (diphosphate) activity","secondary_identifiers":["KEGG_REACTION:R00320","MetaCyc:ACETATE-KINASE-PYROPHOSPHATE-RXN"],"synonyms":[{"name":"acetate kinase (pyrophosphate) activity","type":"related"},{"name":"diphosphate:acetate phosphotransferase activity","type":"related"},{"name":"pyrophosphate-acetate phosphotransferase activity","type":"related"}],"termid":"GO:0047601"}


id: GO:0097322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 7SK small nuclear RNA (7SK snRNA).","definition_xrefs":["GOC:nhn","PMID:21853533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"7SK snRNA binding","synonyms":[{"name":"7SK small nuclear RNA binding","type":"exact"}],"termid":"GO:0097322"}


id: SO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 1 base long that is included as part of two separate codons during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_translational_frameshift","synonyms":[{"name":"minus 1 ribosomal frameshift","type":"exact"},{"name":"minus 1 ribosomal slippage","type":"exact"},{"name":"minus 1 translational frameshift","type":"exact"}],"termid":"SO:0002329"}


id: GO:0090735
data:
  {"annotated_genes":["SJAG_02708","SJAG_04530","SJAG_01708","SJAG_02267","SJAG_01410","SJAG_03221","SJAG_00757","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96593,106340,88736,95113,98246,103706,92243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[92991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[106346,103711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.","definition_xrefs":["GOC:pg","PMID:27233470","PMID:27113759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"DNA repair complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090735","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: PBO:0040514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA wax alcohol acyltransferase 1","termid":"PBO:0040514"}


id: PBO:0039333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, intestinal","termid":"PBO:0039333"}


id: GO:1902748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:17592637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lens fiber cell differentiation","termid":"GO:1902746"},{"relation_name":"positively_regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens fiber cell differentiation","synonyms":[{"name":"activation of lens fiber cell differentiation","type":"narrow"},{"name":"activation of lens fibre cell differentiation","type":"narrow"},{"name":"positive regulation of lens fibre cell differentiation","type":"exact"},{"name":"up regulation of lens fiber cell differentiation","type":"exact"},{"name":"up regulation of lens fibre cell differentiation","type":"exact"},{"name":"up-regulation of lens fiber cell differentiation","type":"exact"},{"name":"up-regulation of lens fibre cell differentiation","type":"exact"},{"name":"upregulation of lens fiber cell differentiation","type":"exact"},{"name":"upregulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902748"}


id: GO:0034400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid found in senescing, formerly green tissues that is derived from a chloroplast that undergoes an organized developmental program of senescence.","definition_xrefs":["PMID:12654863","PMID:24668747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"gerontoplast","termid":"GO:0034400"}


id: PBO:0082608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0082608"}


id: GO:0014075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amine","synonyms":[{"name":"response to amine stimulus","type":"exact"}],"termid":"GO:0014075"}


id: GO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 3''-phosphate.","definition_xrefs":["RHEA:18377","EC:2.7.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"streptomycin 3''-kinase activity","secondary_identifiers":["KEGG_REACTION:R02227","MetaCyc:STREPTOMYCIN-3-KINASE-RXN"],"synonyms":[{"name":"ATP:streptomycin 3''-phosphotransferase activity","type":"related"},{"name":"streptomycin 3''-kinase (phosphorylating)","type":"related"},{"name":"streptomycin 3''-phosphotransferase activity","type":"related"}],"termid":"GO:0050299"}


id: GO:0072764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"},{"relation_name":"is_a","term_name":"response to reversine","termid":"GO:1901596"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reversine","termid":"GO:0072764"}


id: GO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.","definition_xrefs":["GOC:jh2","RESID:AA0206"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-glycyl-L-cysteine (obsolete GO:0018255)","termid":"GO:0018255"}


id: PBO:0087323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP protein component of spliceosomal snRNPs; required for pre-mRNA splicing and snRNP biogenesis; in null mutant newly-synthesized snRNAs are destabilized and 3'-end processing is slowed","termid":"PBO:0087323"}


id: GO:0010992
data:
  {"annotated_genes":["SJAG_00312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108487],"is_not":false,"summary":null,"term":"GO:0010992"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ubiquitin monomers and free ubiquitin chains at the level of the cell by recycling ubiquitin from proteasome-bound ubiquitinated intermediates.","definition_xrefs":["GOC:dph","GOC:tb","PMID:19410548","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquitin recycling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010993"],"synonyms":[{"name":"regulation of ubiquitin homeostasis","type":"narrow"},{"name":"ubiquitin homeostasis","type":"related"}],"termid":"GO:0010992","terms_by_termid":{"GO:0010992":null}}


id: GO:1900831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-leucine.","definition_xrefs":["GOC:TermGenie","PMID:10918062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-leucine metabolic process","synonyms":[{"name":"D-leucine metabolism","type":"exact"}],"termid":"GO:1900831"}


id: GO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=2 symmetry. The T=2 capsid is composed of 12 pentameric dimers.","definition_xrefs":["VZ:838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=2 icosahedral viral capsid","termid":"GO:0039616"}


id: GO:0006452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mechanism whereby different proteins may result from a single mRNA molecule, due to a change in the parsing of three nucleotides per codon relative to an initiating AUG codon.","definition_xrefs":["ISBN:0195094425","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational frameshifting","secondary_identifiers":["Wikipedia:Translational_frameshift"],"termid":"GO:0006452"}


id: PBO:0075472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 22","termid":"PBO:0075472"}


id: PR:O59712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.04c gene.","definition_xrefs":["UniProtKB:O59712","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3B8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.04c","synonyms":[{"name":"Spom972h-SPBC3B8.04c","type":"exact"}],"termid":"PR:O59712"}


id: PBO:0042360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD109 molecule","termid":"PBO:0042360"}


id: GO:0031903
data:
  {"annotated_genes":["SJAG_04315","SJAG_03440","SJAG_02997","SJAG_03781","SJAG_01165","SJAG_04146","SJAG_02693","SJAG_03715","SJAG_00947","SJAG_00974","SJAG_03324","SJAG_00702","SJAG_04763","SJAG_01854","SJAG_01685","SJAG_00891","SJAG_02619","SJAG_03493"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84330,111794,86322,93029,99147,107278,62829,86517,91501,113277,101272,113327,114173,102727,107428,97355,107891,110940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_00974":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_01854":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"microbody membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0031903","terms_by_termid":{"GO:0005778":null}}


id: GO:1901781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cumate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:8631713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"p-cumate metabolic process","synonyms":[{"name":"p-cumate metabolism","type":"exact"}],"termid":"GO:1901781"}


id: PBO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 3","termid":"PBO:0046469"}


id: GO:0032357
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90940],"is_not":false,"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized purine residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized DNA binding","termid":"GO:0032356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oxidized purine DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidised purine DNA binding","type":"exact"},{"name":"oxidized purine base DNA binding","type":"exact"},{"name":"oxidized purine nucleobase DNA binding","type":"exact"}],"termid":"GO:0032357","terms_by_termid":{"GO:0032357":null}}


id: PBO:0044967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 13","termid":"PBO:0044967"}


id: PBO:0066214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 7","termid":"PBO:0066214"}


id: PBO:0059973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 18","termid":"PBO:0059973"}


id: PATO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rate which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rate","synonyms":[{"name":"fast rate","type":"exact"},{"name":"high rate","type":"exact"}],"termid":"PATO:0000912"}


id: SO:0001479
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer trap construct is a type of engineered plasmid which is designed to integrate into a genome and express a reporter when the expression from a basic minimal promoter is enhanced by genomic enhancer elements. Enhancer traps contain promoter elements and are not usually mutagenic.","definition_xrefs":["ZFIN:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_trap_construct","synonyms":[{"name":"enhancer trap construct","type":"exact"}],"termid":"SO:0001479"}


id: GO:1900520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to pullulan","termid":"GO:1900518"},{"relation_name":"positively_regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to pullulan","synonyms":[{"name":"activation of response to pullulan","type":"narrow"},{"name":"up regulation of response to pullulan","type":"exact"},{"name":"up-regulation of response to pullulan","type":"exact"},{"name":"upregulation of response to pullulan","type":"exact"}],"termid":"GO:1900520"}


id: PBO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C2","termid":"PBO:0045206"}


id: GO:0090661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell.","definition_xrefs":["GOC:BHF","PMID:22527283","GOC:jbu","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"box H/ACA telomerase RNP complex","termid":"GO:0090661"}


id: PR:000005216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the human CDC5L gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 5-like protein","synonyms":[{"name":"CDC5L","type":"exact"},{"name":"KIAA0432","type":"related"},{"name":"PCDC5RP","type":"related"},{"name":"cdc5-like protein","type":"exact"},{"name":"pombe cdc5-related protein","type":"exact"}],"termid":"PR:000005216"}


id: GO:0033534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verbascose, the pentasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["MetaCyc:CPD-8065","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"verbascose metabolic process","termid":"GO:0033533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"verbascose biosynthetic process","synonyms":[{"name":"verbascose anabolism","type":"exact"},{"name":"verbascose biosynthesis","type":"exact"},{"name":"verbascose formation","type":"exact"},{"name":"verbascose synthesis","type":"exact"}],"termid":"GO:0033534"}


id: PBO:0007873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin microtubule-binding subunit, p150-Glued Ssm4","termid":"PBO:0007873"}


id: PBO:0030212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0030212"}


id: PATO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity of occurrent","termid":"PATO:0001637"}


id: PBO:0081550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 470","termid":"PBO:0081550"}


id: FYPO:0008068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin silencing at silent mating-type cassette","termid":"FYPO:0004376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased spatial extent of chromatin silencing at silent mating-type cassette","termid":"FYPO:0008068"}


id: PBO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 4 pseudogene","termid":"PBO:0050927"}


id: PATO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000074 shattering (obsolete PATO:0000074)","termid":"PATO:0000074"}


id: PBO:0074055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A34 and TMEM82 antisense RNA 1","termid":"PBO:0074055"}


id: GO:0032798
data:
  {"annotated_genes":["SJAG_01708","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103705,106338],"is_not":false,"summary":null,"term":"GO:0032798"}]},"cv_name":"cellular_component","definition":"A conserved DNA recombinase mediator complex that contains two Swi5 monomers and one Sfr1 monomer in Schizosaccharomyces, or orthologs thereof (e.g. Sae3p and Mei5p in Saccharomyces).","definition_xrefs":["PMID:15620352","PMID:16921379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Swi5-Sfr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Sae3-Mei5 complex","type":"exact"},{"name":"Swi5 complex","type":"broad"}],"termid":"GO:0032798","terms_by_termid":{"GO:0032798":null}}


id: PR:A6X970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.04c gene.","definition_xrefs":["UniProtKB:A6X970","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.04c","synonyms":[{"name":"Spom972h-SPAC23C4.04c","type":"exact"}],"termid":"PR:A6X970"}


id: PBO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma transducin 1","termid":"PBO:0048831"}


id: GO:0102973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 malonyl-CoA + 5 H+ + a hexanoyl-[acyl-carrier-protein] = norsolorinate anthrone + 7 coenzyme A + 7 carbon dioxide + 2 H2O + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz","EC:2.3.1.221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"norsolorinate anthrone synthase activity","secondary_identifiers":["RHEA:35179","MetaCyc:RXN-9479"],"synonyms":[{"name":"norsolorinic acid synthase","type":"exact"}],"termid":"GO:0102973"}


id: GO:0051677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"pullulan metabolic process","termid":"GO:0051676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pullulan biosynthetic process","termid":"GO:0051677"}


id: PBO:0051590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 20 receptor subunit beta","termid":"PBO:0051590"}


id: GO:0071781
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the endoplasmic reticulum consisting of flattened, disc-shaped domains known as cisternae. These are typically found close to the nucleus and are generally more prominent in secretory cells.","definition_xrefs":["PMID:16469703","GOC:vw","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network","synonyms":[{"name":"ER cisternal network","type":"exact"}],"termid":"GO:0071781"}


id: GO:0018644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene + H+ + NADH + O2 = 2-hydroxytoluene + H2O + NAD+.","definition_xrefs":["RHEA:20349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"toluene 2-monooxygenase activity","secondary_identifiers":["EC:1.14.13.243","MetaCyc:TOLUENE-2-MONOOXYGENASE-RXN","UM-BBD_enzymeID:e0222"],"termid":"GO:0018644"}


id: GO:0033151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["GOC:add","ISBN:0781700221","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"V(D)J recombination","secondary_identifiers":["Wikipedia:V(D)J_recombination"],"synonyms":[{"name":"V(D)J joining","type":"exact"},{"name":"V-D-J joining","type":"exact"},{"name":"V-D-J recombination","type":"exact"},{"name":"V-J joining","type":"exact"},{"name":"V-J recombination","type":"exact"}],"termid":"GO:0033151"}


id: GO:0033909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,2-alpha-L-fucoside linkages in fucoidan without release of sulfate.","definition_xrefs":["PMID:6417453","PMID:11910806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"fucoidanase activity","secondary_identifiers":["EC:3.2.1.211","MetaCyc:RXN-20949"],"synonyms":[{"name":"poly(1,2-alpha-L-fucoside-4-sulfate) glycanohydrolase activity","type":"related"}],"termid":"GO:0033909"}


id: PBO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H2","termid":"PBO:0050566"}


id: PBO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 19","termid":"PBO:0071154"}


id: PBO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type B","termid":"PBO:0044303"}


id: GO:1905504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of motile cilium assembly.","definition_xrefs":["GOC:cilia","GOC:TermGenie","GO_REF:0000058","GOC:krc","PMID:25294941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cilium assembly","termid":"GO:1902018"},{"relation_name":"is_a","term_name":"regulation of motile cilium assembly","termid":"GO:1905503"},{"relation_name":"negatively_regulates","term_name":"motile cilium assembly","termid":"GO:0044458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of motile cilium assembly","synonyms":[{"name":"down regulation of motile primary cilia assembly","type":"related"},{"name":"down regulation of motile primary cilia formation","type":"related"},{"name":"down regulation of motile primary cilium assembly","type":"related"},{"name":"down regulation of motile primary cilium formation","type":"related"},{"name":"down regulation of nodal cilium assembly","type":"related"},{"name":"down regulation of nodal cilium formation","type":"related"},{"name":"down-regulation of motile primary cilia assembly","type":"related"},{"name":"down-regulation of motile primary cilia formation","type":"related"},{"name":"down-regulation of motile primary cilium assembly","type":"related"},{"name":"down-regulation of motile primary cilium formation","type":"related"},{"name":"down-regulation of nodal cilium assembly","type":"related"},{"name":"down-regulation of nodal cilium formation","type":"related"},{"name":"downregulation of motile primary cilia assembly","type":"related"},{"name":"downregulation of motile primary cilia formation","type":"related"},{"name":"downregulation of motile primary cilium assembly","type":"related"},{"name":"downregulation of motile primary cilium formation","type":"related"},{"name":"downregulation of nodal cilium assembly","type":"related"},{"name":"downregulation of nodal cilium formation","type":"related"},{"name":"inhibition of motile primary cilia assembly","type":"narrow"},{"name":"inhibition of motile primary cilia formation","type":"narrow"},{"name":"inhibition of motile primary cilium assembly","type":"narrow"},{"name":"inhibition of motile primary cilium formation","type":"narrow"},{"name":"inhibition of nodal cilium assembly","type":"related"},{"name":"inhibition of nodal cilium formation","type":"related"},{"name":"negative regulation of motile primary cilia assembly","type":"related"},{"name":"negative regulation of motile primary cilia formation","type":"related"},{"name":"negative regulation of motile primary cilium assembly","type":"related"},{"name":"negative regulation of motile primary cilium formation","type":"related"},{"name":"negative regulation of nodal cilium assembly","type":"related"},{"name":"negative regulation of nodal cilium formation","type":"related"}],"termid":"GO:1905504"}


id: GO:0021638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"trigeminal nerve morphogenesis","termid":"GO:0021636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve formation","synonyms":[{"name":"CN V biosynthesis","type":"related"},{"name":"CN V formation","type":"related"}],"termid":"GO:0021638"}


id: PBO:0003996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck2","termid":"PBO:0003996"}


id: FYPO:0007610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total volume of all mitochondria in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitochondrial volume","synonyms":[{"name":"decreased mitochondrial volume during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial volume during vegetative growth","type":"exact"},{"name":"decreased total mitochondrial volume","type":"exact"}],"termid":"FYPO:0007610"}


id: GO:0035545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the nervous system with respect to the left and right halves.","definition_xrefs":["PMID:17717195","PMID:19641012","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in nervous system","termid":"GO:0035545"}


id: FYPO:0000917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal citrate (Si)-synthase activity","synonyms":[{"name":"abnormal citrate synthase activity","type":"broad"}],"termid":"FYPO:0000917"}


id: PBO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png1","termid":"PBO:0001912"}


id: PBO:0067659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 836, pseudogene","termid":"PBO:0067659"}


id: PBO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0015713"}


id: GO:1904089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of neuron apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000063","PMID:20150917","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron apoptotic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904089)","synonyms":[{"name":"negative regulation of neuron apoptosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of programmed cell death, neurons by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904089"}


id: GO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit mitochondrial RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["GOC:txnOH","PMID:20701995","PMID:2088182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial single-subunit type RNA polymerase binding","termid":"GO:0001001"}


id: SO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACAGTG), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_heptamer","synonyms":[{"name":"V heptamer","type":"exact"},{"name":"V-HEPTAMER","type":"exact"}],"termid":"SO:0000533"}


id: GO:1903464
data:
  {"annotated_genes":["SJAG_01068","SJAG_03048","SJAG_02162","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104936,112885],"is_not":false,"summary":null,"term":"GO:1903464"},{"annotations":[104937,93843,98426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"negative regulation of nuclear cell cycle DNA replication","termid":"GO:1902576"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle DNA replication","termid":"GO:1903463"},{"relation_name":"negatively_regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"down regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"down regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"down regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"down-regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"down-regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"downregulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"downregulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"downregulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"downregulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"inhibition of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"inhibition of DNA replication involved in S phase involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of DNA replication involved in S-phase involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of mitotic cell cycle DNA replication","type":"narrow"},{"name":"inhibition of mitotic nuclear cell cycle DNA replication","type":"narrow"},{"name":"inhibition of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"negative regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"negative regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"negative regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903464","terms_by_termid":{"GO:1903464":null,"GO:1903467":null}}


id: PR:O74822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC337.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C337.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.11","synonyms":[{"name":"Spom972h-SPBC337.11","type":"exact"}],"termid":"PR:O74822"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: PBO:0109193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh3","termid":"PBO:0109193"}


id: PBO:0077531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 244","termid":"PBO:0077531"}


id: GO:0005194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Mediates the adhesion of the cell to other cells or to the extracellular matrix.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion molecule activity (obsolete GO:0005194)","synonyms":[{"name":"cell adhesion molecule activity","type":"exact"}],"termid":"GO:0005194"}


id: GO:2001068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan binding","termid":"GO:2001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"arabinoxylan binding","termid":"GO:2001068"}


id: PBO:0063240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 5","termid":"PBO:0063240"}


id: PBO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF hand","termid":"PBO:0000276"}


id: PBO:0084146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity iron permease; involved in the transport of iron across the plasma membrane; forms complex with Fet3p; expression is regulated by iron; protein abundance increases in response to DNA replication stress","termid":"PBO:0084146"}


id: PBO:0065367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSD2 antisense RNA 1","termid":"PBO:0065367"}


id: PBO:0048523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-D-glucose phosphorylase 1","termid":"PBO:0048523"}


id: GO:0004081
data:
  {"annotated_genes":["SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113116],"is_not":false,"summary":null,"term":"GO:0004081"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = NTP + NMP. Acts on bis(5'-guanosyl)-, bis(5'-xanthosyl)-, bis(5'-adenosyl)- and bis(5'-uridyl)-tetraphosphate.","definition_xrefs":["EC:3.6.1.17","PMID:4955726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22484","MetaCyc:3.6.1.17-RXN","Reactome:R-HSA-5696197"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap(4)Aase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"Ap4Aase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"bis(5'-adenosyl)-tetraphosphatase activity","type":"narrow"},{"name":"bis(5'-guanosyl)-tetraphosphatase activity","type":"narrow"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase","type":"narrow"},{"name":"diadenosine P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"diguanosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"dinucleoside tetraphosphatase activity","type":"related"},{"name":"dinucleosidetetraphosphatase (asymmetrical) activity","type":"related"}],"termid":"GO:0004081","terms_by_termid":{"GO:0004081":null}}


id: PBO:0017741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase Rdl2 (predicted)","termid":"PBO:0017741"}


id: PBO:0044692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDRGK domain containing 1","termid":"PBO:0044692"}


id: GO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the basement membrane, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["PMID:28228250","PMID:26610918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"basement membrane constituent secretion","termid":"GO:0061864"}


id: PBO:0030318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_oleoyl-CoA_ligase_activity","termid":"PBO:0030318"}


id: PBO:0064628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPAN-P2RY11 readthrough","termid":"PBO:0064628"}


id: GO:0033625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"positively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin activation","synonyms":[{"name":"positive regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033625"}


id: FYPO:0005418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product (usually a protein) that normally has ATPase activator activity has no activity in a mutant. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished ATPase activator activity","synonyms":[{"name":"ATPase activator activity abolished","type":"exact"}],"termid":"FYPO:0005418"}


id: PR:O94582
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.09","synonyms":[{"name":"Spom972h-trp3","type":"exact"},{"name":"anthranilate synthase component I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94582"}


id: GO:0010815
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the peptide bradykinin.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bradykinin catabolic process","termid":"GO:0010815"}


id: PBO:0055277
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2704","termid":"PBO:0055277"}


id: PBO:0042272
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7 pseudogene 1","termid":"PBO:0042272"}


id: PBO:0040916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 20","termid":"PBO:0040916"}


id: PBO:0054475
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1875","termid":"PBO:0054475"}


id: PBO:0047451
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and mu domain containing endocytic adaptor 1","termid":"PBO:0047451"}


id: PBO:0068546
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: PBO:0042381
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD247 molecule","termid":"PBO:0042381"}


id: PBO:0070214
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 144 pseudogene","termid":"PBO:0070214"}


id: PBO:0086690
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: PBO:0066927
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 229","termid":"PBO:0066927"}


id: GO:0015931
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id: PBO:0052699
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id: GO:0009205
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id: GO:0045619
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id: GO:0005148
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id: FYPO:0002870
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id: PBO:0058880
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id: PBO:0089277
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id: PBO:0090211
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id: GO:0060879
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id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: GO:0090649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.","definition_xrefs":["GOC:sl","PMID:21525936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-glucose deprivation","synonyms":[{"name":"response to OGD","type":"exact"}],"termid":"GO:0090649"}


id: PR:O94675
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mam33 gene.","definition_xrefs":["UniProtKB:O94675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acidic protein mam33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.07","synonyms":[{"name":"Spom972h-mam33","type":"exact"}],"termid":"PR:O94675"}


id: PBO:0086502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative positive regulator of mannosylphosphate transferase Mnn6p; involved in mannosylphosphorylation of N-linked oligosaccharides; may also function as a mannosylphosphate transferase; expression increases in late-logarithmic and stationary growth phases; coding sequence contains length polymorphisms in different strains; MNN4 has a paralog, YJR061W, that arose from the whole genome duplication","termid":"PBO:0086502"}


id: PBO:0080978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 12","termid":"PBO:0080978"}


id: GO:1901028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","synonyms":[{"name":"regulation of MOMP","type":"exact"},{"name":"regulation of mitochondrial outer membrane permeabilization","type":"broad"}],"termid":"GO:1901028"}


id: GO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-7,8-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:1137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"benzo(a)pyrene 7,8-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r1137","EC:1.13.11.-"],"termid":"GO:0034813"}


id: GO:0047075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + 2,5-dihydroxypyridine = formate + maleamate.","definition_xrefs":["MetaCyc:1.13.11.9-RXN","EC:1.13.11.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,5-dihydroxypyridine 5,6-dioxygenase activity","secondary_identifiers":["RHEA:27522","UM-BBD_reactionID:r1443"],"synonyms":[{"name":"2,5-dihydroxypyridine oxygenase activity","type":"related"},{"name":"2,5-dihydroxypyridine:oxygen 5,6-oxidoreductase activity","type":"related"},{"name":"pyridine-2,5-diol dioxygenase activity","type":"related"}],"termid":"GO:0047075"}


id: GO:0102500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + a plant soluble heteroglycan = a plant soluble heteroglycan + maltose.","definition_xrefs":["EC:2.4.1.25","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"beta-maltose 4-alpha-glucanotransferase activity","secondary_identifiers":["MetaCyc:RXN-14354"],"termid":"GO:0102500"}


id: PBO:0062008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 2","termid":"PBO:0062008"}


id: FYPO:0005110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal sodium export","synonyms":[{"name":"normal cellular sodium export","type":"exact"},{"name":"normal sodium export during mitotic cell cycle","type":"related"},{"name":"normal sodium export during vegetative growth","type":"exact"},{"name":"normal sodium export from cell","type":"exact"},{"name":"normal sodium ion export","type":"exact"}],"termid":"FYPO:0005110"}


id: SO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is invalidated due to partial processing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_partial_processing","synonyms":[{"name":"invalidated by partial processing","type":"exact"}],"termid":"SO:0000416"}


id: PBO:0075341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase 2, pseudogene","termid":"PBO:0075341"}


id: GO:0061578
data:
  {"annotated_genes":["SJAG_01281","SJAG_01528"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87710,92614],"is_not":false,"summary":null,"term":"GO:0061578"}]},"cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys63 residue of ubiquitin.","definition_xrefs":["GOC:dph","PMID:18313383","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01281":null,"SJAG_01528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0008233","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"K63-linked deubiquitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9750942","Reactome:R-HSA-688136","Reactome:R-HSA-9685219","Reactome:R-HSA-5696547","Reactome:R-HSA-8869506","Reactome:R-HSA-5357845","Reactome:R-HSA-936390","Reactome:R-HSA-5691411","Reactome:R-HSA-936381","Reactome:R-HSA-9817400","Reactome:R-HSA-9711016","Reactome:R-HSA-741411","Reactome:R-HSA-5691439","Reactome:R-HSA-5690856","Reactome:R-HSA-5691431"],"synonyms":[{"name":"K63-specific deubiquitinase activity","type":"exact"},{"name":"Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"GO:0061578","terms_by_termid":{"GO:0061578":null}}


id: PBO:0071914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 53","termid":"PBO:0071914"}


id: PBO:0012049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein/DNA polymerase eta Eso1 fusion protein","termid":"PBO:0012049"}


id: FYECO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping starvation and timing","termid":"FYECO:0000239"}


id: PBO:0087002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor; involved in the localization and regulation of Cdc42p and Rho1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087002"}


id: PBO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SA pseudogene 1","termid":"PBO:0044056"}


id: GO:0018857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorobenzoate + ATP + CoASH = AMP + diphosphate + 2,4-dichlorobenzoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"2,4-dichlorobenzoate-CoA ligase activity","termid":"GO:0018857"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_05207","SJAG_03345","SJAG_02989","SJAG_04789","SJAG_04850","SJAG_00852","SJAG_00368","SJAG_00254","SJAG_04026","SJAG_00340","SJAG_03464","SJAG_00948","SJAG_02093","SJAG_02392","SJAG_04209","SJAG_00109","SJAG_02444","SJAG_01738","SJAG_01114","SJAG_02173","SJAG_01835","SJAG_02260","SJAG_04509","SJAG_01774","SJAG_00096","SJAG_01307","SJAG_04851","SJAG_04077","SJAG_04363","SJAG_02435","SJAG_02605","SJAG_02916","SJAG_05268","SJAG_02196","SJAG_04018","SJAG_04583","SJAG_00218","SJAG_01029","SJAG_02587","SJAG_00415","SJAG_03081","SJAG_04875","SJAG_02233","SJAG_01290","SJAG_04732","SJAG_01242","SJAG_01249","SJAG_01806","SJAG_01134","SJAG_02102","SJAG_04238","SJAG_03204","SJAG_00077","SJAG_00605","SJAG_04685","SJAG_01086","SJAG_00797","SJAG_05272","SJAG_04483","SJAG_00310","SJAG_03640","SJAG_03596","SJAG_00784","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84189,105347],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[105891,89966,90785,91151,101868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[100850,102626,85355,95311,100509,96572,111802,98558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[99782,84001,84071,102627,88644,98475,85826,88479,103079,95031,106905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[91915,102628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[110793,111633,86021,86215,109077,90921,114335,98302,98295,87948,109784,91348,113790,114771,113359,90919,90920,102597,110413,112311,90124,98303,90907,100051,103822,110513,87651,96862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[106583],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[96507,99819],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[105057,103173,102527,90296],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[95833,90787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[89885,86056,92318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00605":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_00948":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02102":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02392":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03204":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: PBO:0055337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2765","termid":"PBO:0055337"}


id: PBO:0057185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 340","termid":"PBO:0057185"}


id: PBO:0005875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15S rRNA","termid":"PBO:0005875"}


id: PBO:0028829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization","termid":"PBO:0028829"}


id: GO:0030015
data:
  {"annotated_genes":["SJAG_00343","SJAG_01053","SJAG_01944","SJAG_03597","SJAG_04350","SJAG_02540","SJAG_00285","SJAG_03883","SJAG_04407"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85884,88063,88565,88657,90404,91579,111687,112641,113183],"is_not":false,"summary":null,"term":"GO:0030015"}]},"cv_name":"cellular_component","definition":"The core of the CCR4-NOT complex. In Saccharomyces the CCR4-NOT core complex comprises Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p.","definition_xrefs":["GOC:sart","PMID:11113136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"CCR4-NOT complex","termid":"GO:0030014"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_01053":null,"SJAG_01944":null,"SJAG_02540":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04350":null,"SJAG_04407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CCR4-NOT core complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030015","terms_by_termid":{"GO:0030015":null}}


id: GO:0097565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["GOC:giardia","PMID:16607022","PMID:5961344","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right middle basal body pair","termid":"GO:0097565"}


id: PBO:0005402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.37","termid":"PBO:0005402"}


id: PBO:0065632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 1","termid":"PBO:0065632"}


id: PBO:0084070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in initiation of Mitotic Exit Network (MEN); GTP-binding protein of the Ras superfamily; accumulates at daughter spindle pole body and activates MEN kinase cascade; controls actomyosin and septin dynamics during cytokinesis","termid":"PBO:0084070"}


id: GO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A large multisubunit protease found in the cytosol that recognizes, unfolds, and digests protein substrates that have been marked for degradation by the attachment of a ubiquitin group. Individual subcomplexes of the complete 26S proteasome are involved in these different tasks: the ATP-dependent 19S caps are believed to unfold substrates and feed them to the actual protease, the 20S proteasome.","definition_xrefs":["PMID:10410804"],"gene_count":0,"genotype_count":0,"name":"obsolete 26S proteasome (obsolete GO:0005837)","synonyms":[{"name":"26S proteasome","type":"exact"}],"termid":"GO:0005837"}


id: GO:0033777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + lithocholate + NADPH + O2 = 6-beta-hydroxylithocholate + H2O + NADP+.","definition_xrefs":["EC:1.14.14.138","RHEA:18857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lithocholate 6beta-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.94-RXN","KEGG_REACTION:R07203"],"synonyms":[{"name":"6beta-hydroxylase activity","type":"broad"},{"name":"CYP3A10","type":"related"},{"name":"cytochrome P450 3A10/lithocholic acid 6beta-hydroxylase activity","type":"related"},{"name":"lithocholate 6beta-monooxygenase activity","type":"related"},{"name":"lithocholate,NADPH:oxygen oxidoreductase (6beta-hydroxylating) activity","type":"related"}],"termid":"GO:0033777"}


id: GO:0051653
data:
  {"annotated_genes":["SJAG_02695","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93050,112976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process in which is the spindle is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"spindle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of spindle localization","type":"exact"},{"name":"spindle localisation","type":"exact"}],"termid":"GO:0051653","terms_by_termid":{"GO:0000132":null}}


id: GO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"transverse filament","termid":"GO:0000802"}


id: GO:1905631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:11377826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"},{"relation_name":"is_a","term_name":"response to glyceraldehyde","termid":"GO:1905630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glyceraldehyde","termid":"GO:1905631"}


id: PBO:0059907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 30","termid":"PBO:0059907"}


id: PBO:0053017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 5","termid":"PBO:0053017"}


id: PBO:0111338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATP-dependent RNA helicase Has1","termid":"PBO:0111338"}


id: PBO:0070836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 15","termid":"PBO:0070836"}


id: GO:0043061
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83989,89901],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during meiosis II chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"meiotic metaphase II chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043061","terms_by_termid":{"GO:0051456":null}}


id: GO:0045813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, calcium modulating pathway","termid":"GO:0008591"},{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway, calcium modulating pathway","termid":"GO:0007223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway, calcium modulating pathway","synonyms":[{"name":"activation of frizzled-2 signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signalling pathway","type":"exact"},{"name":"stimulation of frizzled-2 signaling pathway","type":"narrow"},{"name":"up regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"up-regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"upregulation of frizzled-2 signaling pathway","type":"exact"}],"termid":"GO:0045813"}


id: GO:0019555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including ornithine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process to ornithine","secondary_identifiers":["MetaCyc:GLUTORN-PWY"],"synonyms":[{"name":"glutamate breakdown to ornithine","type":"exact"},{"name":"glutamate degradation to ornithine","type":"exact"}],"termid":"GO:0019555"}


id: PBO:0014256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1 (predicted)","termid":"PBO:0014256"}


id: GO:0090115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule that contributes to chromatin silencing.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete C-5 methylation on cytosine involved in chromatin silencing (obsolete GO:0090115)","termid":"GO:0090115"}


id: PBO:0055659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3099","termid":"PBO:0055659"}


id: PBO:0031849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spore","termid":"PBO:0031849"}


id: GO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-5 production","secondary_identifiers":["GO:0072603","GO:0042225"],"synonyms":[{"name":"IL-5 production","type":"exact"},{"name":"interleukin-5 biosynthetic process","type":"narrow"},{"name":"interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032634"}


id: PBO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sre1","termid":"PBO:0000469"}


id: PBO:0086474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086474"}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: PBO:0066306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region like","termid":"PBO:0066306"}


id: PR:G2TRM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.12","synonyms":[{"name":"Spom972h-SPAC8E11.12","type":"exact"}],"termid":"PR:G2TRM4"}


id: PBO:0081257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 26","termid":"PBO:0081257"}


id: PBO:0031367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_recombination","termid":"PBO:0031367"}


id: GO:0052830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,6-tetrakisphosphate + H2O = inositol-1,3,4-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 6-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855171"],"termid":"GO:0052830"}


id: SO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A site where restriction enzymes can cleave that will produce an overhang or 'sticky end'.","direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_recognition_site","termid":"SO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"sticky end restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001692"}


id: PBO:0078631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif family like 2","termid":"PBO:0078631"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: PBO:0027129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_carbohydrate_metabolism_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0027129"}


id: GO:1901743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-deoxystreptamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"2-deoxystreptamine metabolic process","termid":"GO:1901742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-deoxystreptamine catabolic process","synonyms":[{"name":"2-deoxystreptamine breakdown","type":"exact"},{"name":"2-deoxystreptamine catabolism","type":"exact"},{"name":"2-deoxystreptamine degradation","type":"exact"}],"termid":"GO:1901743"}


id: PBO:0086983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of trehalose-6-phosphate synthase/phosphatase; involved in synthesis of storage carbohydrate trehalose; expression is induced by stress conditions and repressed by the Ras-cAMP pathway; TPS3 has a paralog, TSL1, that arose from the whole genome duplication","termid":"PBO:0086983"}


id: GO:0032890
data:
  {"annotated_genes":["SJAG_03591","SJAG_03970","SJAG_00991","SJAG_04920","SJAG_05346","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[86027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[89390,94938,87811,106585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[94939,87812,89391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032890","terms_by_termid":{"GO:0035432":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0080085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of a protein and RNA component which binds the signal sequence of some proteins and facilitates their export to the chloroplast.","definition_xrefs":["PMID:17513500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal recognition particle","termid":"GO:0048500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle, chloroplast targeting","termid":"GO:0080085"}


id: GO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"negatively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of blood-brain barrier","synonyms":[{"name":"negative regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090212"}


id: PBO:0091067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate- and Fe(II)-dependent oxygenase Jmj1","termid":"PBO:0091067"}


id: PBO:0110258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110258"}


id: GO:0050530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-O-(beta-D-glucosyl)-sn-glycerol 3-phosphate + H2O = 2-O-(beta-D-glucosyl)-sn-glycerol + phosphate.","definition_xrefs":["RHEA:22652","EC:3.1.3.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glucosylglycerol 3-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.69-RXN","KEGG_REACTION:R05791"],"synonyms":[{"name":"2-(beta-D-glucosyl)-sn-glycerol-3-phosphate phosphohydrolase activity","type":"related"},{"name":"StpA","type":"related"},{"name":"salt tolerance protein A","type":"related"}],"termid":"GO:0050530"}


id: PBO:0087922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that is activated by a MAPK signaling cascade; activates genes involved in mating or pseudohyphal/invasive growth pathways; cooperates with Tec1p transcription factor to regulate genes specific for invasive growth","termid":"PBO:0087922"}


id: FYPO:0002269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutamate-ammonia ligase activity","termid":"FYPO:0002267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased glutamate-ammonia ligase activity","synonyms":[{"name":"decreased GS activity","type":"exact"},{"name":"decreased glutamine synthetase activity","type":"exact"},{"name":"decreased glutamylhydroxamic synthetase activity","type":"exact"},{"name":"reduced glutamate-ammonia ligase activity","type":"exact"}],"termid":"FYPO:0002269"}


id: GO:0045776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is decreased.","definition_xrefs":["GOC:go_curators","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood pressure","synonyms":[{"name":"down regulation of blood pressure","type":"exact"},{"name":"down-regulation of blood pressure","type":"exact"},{"name":"downregulation of blood pressure","type":"exact"},{"name":"inhibition of blood pressure","type":"narrow"}],"termid":"GO:0045776"}


id: GO:0106162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in mRNA + acetyl-CoA + ATP + H2O = ADP + an N(4)-acetylcytidine in mRNA + CoA + H+ + phosphate.","definition_xrefs":["PMID:30449621","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"mRNA N-acetyltransferase activity","secondary_identifiers":["RHEA:58480"],"termid":"GO:0106162"}


id: PBO:0085461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; recycles inorganic phosphate byproduct of glycosylation from ER and Golgi; involved in recycling of early Golgi glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0085461"}


id: SO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification where the modification is the acylation of the residue.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_modification","termid":"SO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_acetylation_site","synonyms":[{"name":"histone acetylation","type":"exact"},{"name":"histone acetylation site","type":"exact"}],"termid":"SO:0001702"}


id: FYPO:0000761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population undergoes conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased conjugation frequency","synonyms":[{"name":"increased conjugation efficiency","type":"related"},{"name":"increased mating frequency","type":"exact"},{"name":"increased occurrence of conjugation","type":"exact"},{"name":"increased zygote formation","type":"related"}],"termid":"FYPO:0000761"}


id: PBO:0026676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_aluminium","termid":"PBO:0026676"}


id: GO:0031813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y2 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"P2Y2 nucleotide receptor binding","synonyms":[{"name":"P2Y2 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031813"}


id: GO:0005372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of water (H2O) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"water transmembrane transporter activity","termid":"GO:0005372"}


id: PBO:0075414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome developmental regulator","termid":"PBO:0075414"}


id: GO:0018737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-ketocyclohexane-1-carboxyl-CoA + H2O = pimeloyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-ketocyclohexane-1-carboxyl-CoA hydrolase activity","termid":"GO:0018737"}


id: PBO:0047886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(5)(q35)","termid":"PBO:0047886"}


id: PR:Q9P7K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDO1-like protein C21C3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.19","synonyms":[{"name":"Spom972h-SPBC21C3.19","type":"exact"}],"termid":"PR:Q9P7K6"}


id: PBO:0025520
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by A. thaliana cdc2bAt","termid":"PBO:0025520"}


id: GO:0038197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that binds a type I interferon and transmits the signal across the membrane into the cell. Consists of an alpha subunit (IFNAR1) and a beta subunit (IFNAR2).","definition_xrefs":["GOC:cjm","GOC:signaling","PMID:17502368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"type I interferon receptor complex","synonyms":[{"name":"interferon-alpha/beta receptor complex","type":"narrow"}],"termid":"GO:0038197"}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: GO:0051186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor metabolic process (obsolete GO:0051186)","synonyms":[{"name":"cofactor metabolism","type":"exact"}],"termid":"GO:0051186"}


id: RO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are reduced or eliminated by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_ameliorated_by","termid":"RO:0003310"}


id: PBO:0036255
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ2","termid":"PBO:0036255"}


id: GO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine/pyrimidine nucleoside diphosphate reduction (obsolete GO:0006162)","synonyms":[{"name":"purine/pyrimidine nucleoside diphosphate reduction","type":"exact"}],"termid":"GO:0006162"}


id: GO:0070972
data:
  {"annotated_genes":["SJAG_03955","SJAG_02208","SJAG_02354","SJAG_00360","SJAG_01782","SJAG_02588","SJAG_00284","SJAG_01558","SJAG_03684","SJAG_01750","SJAG_00959","SJAG_02456","SJAG_02330","SJAG_00064","SJAG_01759","SJAG_01840","SJAG_02867","SJAG_03737","SJAG_03411","SJAG_03396","SJAG_01282","SJAG_00175","SJAG_01496","SJAG_04129","SJAG_01001","SJAG_03244","SJAG_00603","SJAG_03315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105678,84043,91813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[94123,86676,102204,104353,105384,106448,93413],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[96885,91594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070973"},{"annotations":[88203],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006621"},{"annotations":[100527,94436,108599,83767,94488,94660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[111970,86917,105679,112683,90351,105801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[110407,111168,87699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[94125,98634,102206,104355,105386,111971],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00284":null,"SJAG_00360":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01001":null,"SJAG_01282":null,"SJAG_01496":null,"SJAG_01558":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02456":null,"SJAG_02588":null,"SJAG_02867":null,"SJAG_03244":null,"SJAG_03315":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03955":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in endoplasmic reticulum","type":"exact"},{"name":"protein localization in ER","type":"exact"},{"name":"protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:0070972","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0006621":null,"GO:0031204":null,"GO:0045047":null,"GO:0070973":null}}


id: GO:0044599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An AP-type membrane coat adaptor complex that in humans consists of beta5, zeta, mu5 and sigma5 subunits and is found associated with membranes in the endosomes; it is not clear whether AP-5 forms clathrin coats in vivo.","definition_xrefs":["PMID:22022230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"AP-5 adaptor complex","synonyms":[{"name":"adaptor protein-5 adaptor complex","type":"exact"}],"termid":"GO:0044599"}


id: PBO:0044652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 3","termid":"PBO:0044652"}


id: PBO:0031541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmental_process_phenotype","termid":"PBO:0031541"}


id: SO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An adenine methylated at the 6 nitrogen.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_adenine","termid":"SO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyladenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"6-mA","type":"exact"},{"name":"6-methyladenine","type":"exact"},{"name":"6mA","type":"exact"},{"name":"N6-methyladenine","type":"exact"},{"name":"m-6A","type":"exact"},{"name":"m6a","type":"exact"}],"termid":"SO:0001920"}


id: PBO:0066065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor associated protein of the synapse","termid":"PBO:0066065"}


id: PBO:0018243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein","termid":"PBO:0018243"}


id: PBO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp51 (predicted)","termid":"PBO:0002868"}


id: GO:0009198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009198"}


id: FYPO:0007006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination downstream of replication fork barriers is increased.","definition_xrefs":["PMID:30667359","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"increased recombination downstream of mitotic DNA replication fork barriers","type":"exact"},{"name":"increased template switching recombination downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007006"}


id: GO:0102291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11alpha-hydroxy-beta-amyrin + O2 + NADPH + H+ = 11-oxo-beta-amyrin + 2 H2O + NADP.","definition_xrefs":["RHEA:31719","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"11alpha-hydroxy-beta-amyrin dehydrogenase activity","secondary_identifiers":["EC:1.14.14.152","MetaCyc:RXN-12682"],"termid":"GO:0102291"}


id: PATO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001125 absolute pressure value (obsolete PATO:0001125)","termid":"PATO:0001125"}


id: PBO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi tethering factor Uso1 (predicted)","termid":"PBO:0002504"}


id: PBO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus, see mat1-Mi","termid":"PBO:0016123"}


id: GO:0046034
data:
  {"annotated_genes":["SJAG_07003","SJAG_03903","SJAG_00605","SJAG_02369","SJAG_03373","SJAG_03114","SJAG_02598","SJAG_00542","SJAG_03828","SJAG_MIT37","SJAG_00027","SJAG_02796","SJAG_06622","SJAG_03852","SJAG_05204","SJAG_01471","SJAG_02135","SJAG_06621","SJAG_05314","SJAG_02038","SJAG_00836","SJAG_02107","SJAG_02945","SJAG_00633","SJAG_00915","SJAG_00438","SJAG_00136","SJAG_04495","SJAG_00461","SJAG_03660","SJAG_00839","SJAG_04334","SJAG_04048","SJAG_02105","SJAG_MIT15","SJAG_00985","SJAG_00133","SJAG_02564","SJAG_04122","SJAG_01310","SJAG_02009","SJAG_04192","SJAG_00685","SJAG_04422","SJAG_03925","SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92683,94201,94972],"is_not":false,"summary":null,"term":"GO:0046034"},{"annotations":[100511,101856,105439,101489,99702,101491,101855,104972,91086,104974,105437,101490,104973,105441,105442,104971,104975,104976,105440,105443,99444,112392,105438,94066,94338,104977,90596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94255,107616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[74992,71967],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[66416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[89939,101038,85235,104832,90913,103856,99091,115054,115063,89339,111884,88914,99742,99713,103946,97869,115059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114011],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ATP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ATP metabolism","type":"exact"}],"termid":"GO:0046034","terms_by_termid":{"GO:0006096":null,"GO:0015986":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905706":null}}


id: PBO:0068050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 355","termid":"PBO:0068050"}


id: GO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoylglycine => H2O + imidazol-4-one.","definition_xrefs":["PMID:27286964","RHEA:24935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"imidazolone hydrolase activity","termid":"GO:0043804"}


id: PBO:0061652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUF2 component of NDC80 kinetochore complex","termid":"PBO:0061652"}


id: PBO:0054498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1898","termid":"PBO:0054498"}


id: PBO:0056556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 4","termid":"PBO:0056556"}


id: GO:0006979
data:
  {"annotated_genes":["SJAG_01084","SJAG_01734","SJAG_05181","SJAG_03924","SJAG_03886","SJAG_03166","SJAG_00984","SJAG_06611","SJAG_04311","SJAG_02592","SJAG_03896","SJAG_01292","SJAG_04403","SJAG_01162","SJAG_01216","SJAG_03903","SJAG_03303","SJAG_04399","SJAG_00419","SJAG_04788","SJAG_03414","SJAG_04953","SJAG_02485","SJAG_06622","SJAG_04823","SJAG_00141","SJAG_04632","SJAG_04036","SJAG_02135","SJAG_02249","SJAG_00027","SJAG_03330","SJAG_02495","SJAG_02858","SJAG_02515","SJAG_04125","SJAG_02044","SJAG_02433","SJAG_03828","SJAG_04287","SJAG_06621","SJAG_01199","SJAG_05014","SJAG_03653","SJAG_00668","SJAG_00996","SJAG_01855","SJAG_02573","SJAG_02945"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114288,101073,91267,96049,104876,113388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[85506,112766,104984,86191,91641,90438,97910,109548,104979,89630,104982,67377,101256,88228,86291,86978,97857,104981,93691,103850,84681,92064,104980,104983,89326,110505,74110,94022,104978,72285,97392,110780,97044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[96050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[87595,85900,86293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:2000815"},{"annotations":[64533,85507,106137,106182,58058,89194,67547,96210,85093,95329],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:12115731","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03886":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04287":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05014":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006979","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0034614":null,"GO:0061692":null,"GO:2000815":null}}


id: FYPO:0000671
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115428,115429,115430],"is_not":false,"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation at the rDNA repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal rDNA separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic sister chromatid separation at rDNA","type":"exact"},{"name":"abnormal rDNA separation during mitosis","type":"exact"},{"name":"abnormal rDNA separation during mitotic cell cycle","type":"related"},{"name":"abnormal rDNA separation during vegetative growth","type":"exact"},{"name":"abnormal ribosomal DNA separation","type":"exact"},{"name":"abnormal segregation of nucleolar rDNA","type":"related"}],"termid":"FYPO:0000671","terms_by_termid":{"FYPO:0000671":null}}


id: PBO:0027120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_azygotic_meiosis_I","termid":"PBO:0027120"}


id: FYECO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which doxorubicin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ doxorubicin","synonyms":[{"name":"+ 14-hydroxydaunomycin ","type":"related"},{"name":"+ 14-hydroxydaunorubicine ","type":"related"},{"name":"+ adriamycin","type":"related"}],"termid":"FYECO:0000308"}


id: PBO:0055958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 72","termid":"PBO:0055958"}


id: FYPO:0002860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase activity is abnormal.","definition_xrefs":["PMID:17449726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal poly(U) polymerase activity","synonyms":[{"name":"abnormal RNA uridylyltransferase activity","type":"exact"},{"name":"abnormal polynucleotide uridylyltransferase activity","type":"exact"}],"termid":"FYPO:0002860"}


id: PBO:0050209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 26","termid":"PBO:0050209"}


id: GO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002305"}


id: PBO:0066530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 5","termid":"PBO:0066530"}


id: FYPO:0006156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium arsenite (AsNaO2). Cells stop growing (and may die) at a concentration of sodium arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium arsenite","synonyms":[{"name":"hypersensitive to sodium arsenite","type":"exact"},{"name":"sensitive to AsNaO2","type":"exact"},{"name":"sensitive to sodium arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium arsenite during vegetative growth","type":"exact"}],"termid":"FYPO:0006156"}


id: GO:0009112
data:
  {"annotated_genes":["SJAG_00694","SJAG_05287","SJAG_04300","SJAG_02364","SJAG_00412","SJAG_01661","SJAG_04354","SJAG_00779","SJAG_03164","SJAG_02593","SJAG_01070","SJAG_04709","SJAG_00964","SJAG_00444","SJAG_04297","SJAG_01081","SJAG_01673","SJAG_06634","SJAG_03708","SJAG_01859","SJAG_05024","SJAG_00392","SJAG_01814","SJAG_00197","SJAG_01997","SJAG_03140","SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89481,107954,94565,107117,111609,112758,83909,102553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[106294,106405,113375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[93877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046083"},{"annotations":[89604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[111068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[89826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046100"},{"annotations":[106295,110544,93878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[110109,87845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[112877,112412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006144"},{"annotations":[85554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019856"},{"annotations":[90429,110954,85301,83582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006206"},{"annotations":[88043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"},{"annotations":[113379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01673":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01997":null,"SJAG_02364":null,"SJAG_02593":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04300":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_05024":null,"SJAG_05287":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleobase metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase metabolism","type":"exact"}],"termid":"GO:0009112","terms_by_termid":{"GO:0006144":null,"GO:0006145":null,"GO:0006147":null,"GO:0006168":null,"GO:0006206":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0009115":null,"GO:0019856":null,"GO:0046083":null,"GO:0046084":null,"GO:0046100":null}}


id: PBO:0030383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth","termid":"PBO:0030383"}


id: PATO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being still one contiguous whole but structurally damaged such that in danger of become two or more.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially broken","termid":"PATO:0002082"}


id: GO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microtubule, mediated by motor proteins.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitochondrion localization, microtubule-mediated","termid":"GO:0034643"},{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion transport along microtubule","synonyms":[{"name":"mitochondrial migration along microtubule","type":"exact"},{"name":"mitochondrial transport along microtubule","type":"exact"}],"termid":"GO:0047497"}


id: PBO:0049708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAS2 antisense RNA 1","termid":"PBO:0049708"}


id: PBO:0004921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp6 (predicted)","termid":"PBO:0004921"}


id: PATO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001209 absolute function (obsolete PATO:0001209)","termid":"PATO:0001209"}


id: PBO:0044271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 11","termid":"PBO:0044271"}


id: PBO:0074990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-1","termid":"PBO:0074990"}


id: GO:1901186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"positively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ERBB signaling pathway","synonyms":[{"name":"activation of EGF receptor family signaling pathway","type":"exact"},{"name":"activation of EGFR family signaling pathway","type":"related"},{"name":"activation of ERBB signaling pathway","type":"narrow"},{"name":"activation of ERBB signalling pathway","type":"exact"},{"name":"activation of ErbB signaling","type":"exact"},{"name":"positive regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"positive regulation of EGFR family signaling pathway","type":"related"},{"name":"positive regulation of ERBB signalling pathway","type":"exact"},{"name":"positive regulation of ErbB signaling","type":"exact"},{"name":"up regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up regulation of EGFR family signaling pathway","type":"related"},{"name":"up regulation of ERBB signaling pathway","type":"exact"},{"name":"up regulation of ERBB signalling pathway","type":"exact"},{"name":"up regulation of ErbB signaling","type":"exact"},{"name":"up-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up-regulation of EGFR family signaling pathway","type":"related"},{"name":"up-regulation of ERBB signaling pathway","type":"exact"},{"name":"up-regulation of ERBB signalling pathway","type":"exact"},{"name":"up-regulation of ErbB signaling","type":"exact"},{"name":"upregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"upregulation of EGFR family signaling pathway","type":"related"},{"name":"upregulation of ERBB signaling pathway","type":"exact"},{"name":"upregulation of ERBB signalling pathway","type":"exact"},{"name":"upregulation of ErbB signaling","type":"exact"}],"termid":"GO:1901186"}


id: GO:2000236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"negatively_regulates","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"negative regulation of tRNA processing","synonyms":[{"name":"negative regulation of tRNA maturation","type":"exact"}],"termid":"GO:2000236"}


id: PR:Q9Y7Y1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sgm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.07c","synonyms":[{"name":"Spom972h-SPBC365.07c","type":"exact"}],"termid":"PR:Q9Y7Y1"}


id: PBO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 1","termid":"PBO:0072226"}


id: PBO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4 (predicted)","termid":"PBO:0001644"}


id: PBO:0073503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 2","termid":"PBO:0073503"}


id: PBO:0080358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 13 pseudogene","termid":"PBO:0080358"}


id: PBO:0085445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of allophanate inducible genes; binds a dodecanucleotide sequence upstream of all genes that are induced by allophanate; contains an UISALL DNA-binding, a transcriptional activation, and a coiled-coil domain","termid":"PBO:0085445"}


id: GO:0021519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an association neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord association neuron specification","termid":"GO:0021519"}


id: PBO:0053709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 917","termid":"PBO:0053709"}


id: PBO:0065740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paxillin","termid":"PBO:0065740"}


id: PBO:0063835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA 2-hydroxylase interacting protein","termid":"PBO:0063835"}


id: PBO:0063346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentrin","termid":"PBO:0063346"}


id: GO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of cell growth.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"part_of","term_name":"regulation of cell size","termid":"GO:0008361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extent of cell growth","termid":"GO:0061387"}


id: GO:0051951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of L-glutamate import across plasma membrane","termid":"GO:0002038"},{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of glutamate uptake involved in transmission of nerve impulse","termid":"GO:0051946"},{"relation_name":"positively_regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of glutamate reuptake","type":"exact"},{"name":"positive regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of glutamate uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of glutamate uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051951"}


id: SO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding tyrosyl tRNA (SO:000272).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine_tRNA_primary_transcript","synonyms":[{"name":"tyrosine tRNA primary transcript","type":"exact"}],"termid":"SO:0000229"}


id: FYECO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amitrole (3-amino-1,2,4-triazole) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amitrole","synonyms":[{"name":"+ 3-AT","type":"exact"},{"name":"+ 3-amino-1,2,4-triazole","type":"exact"},{"name":"+ 3AT","type":"exact"}],"termid":"FYECO:0000251"}


id: PBO:0074021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14 pseudogene 1","termid":"PBO:0074021"}


id: GO:1901526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"positive regulation of autophagy of mitochondrion","termid":"GO:1903599"},{"relation_name":"positively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0007005","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitophagy","synonyms":[{"name":"activation of macromitophagy","type":"narrow"},{"name":"positive regulation of macromitophagy","type":"exact"},{"name":"up regulation of macromitophagy","type":"exact"},{"name":"up-regulation of macromitophagy","type":"exact"},{"name":"upregulation of macromitophagy","type":"exact"}],"termid":"GO:1901526"}


id: PBO:0058470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5572","termid":"PBO:0058470"}


id: GO:0140382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryptamine + reduced acceptor + O2 = 4-hydroxytryptamine + acceptor + H2O.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tryptamine 4-monooxygenase activity","secondary_identifiers":["RHEA:15865","EC:1.14.99.59"],"termid":"GO:0140382"}


id: PBO:0076337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 5","termid":"PBO:0076337"}


id: GO:0031261
data:
  {"annotated_genes":["SJAG_01354","SJAG_04341","SJAG_04995","SJAG_00857","SJAG_01267","SJAG_02667","SJAG_01762","SJAG_02800","SJAG_02394","SJAG_02348","SJAG_02098","SJAG_05301","SJAG_04210","SJAG_00536","SJAG_03451","SJAG_00696","SJAG_01624","SJAG_00884","SJAG_03927","SJAG_00327","SJAG_00874"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86531,88027,90006,90621,93394,95474,102451,103282,103874,104089,106258,107418,107677,109215,109606,111139,111308],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[89043,107939,109525,109197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000811"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins immediately prior to the initiation of DNA replication. The preinitiation complex is formed by the assembly of additional proteins onto an existing prereplicative complex. In budding yeast, the additional proteins might include Cdc45p, Sld2p, Sld3p, Dpb11p, DNA polymerases, and others; in fission yeast the GINS complex is present.","definition_xrefs":["PMID:17230184","GOC:hjd","GOC:jl","GOC:rb","PMID:15194812","GOC:bf","GOC:vw","PMID:12694535","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_02098":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04995":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"DNA replication preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-IC","type":"exact"}],"termid":"GO:0031261","terms_by_termid":{"GO:0000811":null,"GO:0031261":null}}


id: GO:0031210
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111791],"is_not":false,"summary":null,"term":"GO:0031210"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylcholine, a glycophospholipid in which a phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylcholine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031210","terms_by_termid":{"GO:0031210":null}}


id: GO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a tumor cell that act to protect the cell or organism.","definition_xrefs":["ISBN:0781735149","PMID:16730260","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to tumor cell","termid":"GO:0002357"}


id: FYPO:0007004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal in regions containing protein coding genes. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["GO:0043486","PomBase:mah","GO:0005721","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone turnover at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone exchange at protein coding gene during mitotic cell cycle","type":"related"},{"name":"reduced histone exchange at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007004"}


id: GO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Subunit of a heterotrimeric G-protein GTPase; associates tightly with the gamma subunit.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein GTPase, beta-subunit (obsolete GO:0000264)","synonyms":[{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"exact"}],"termid":"GO:0000264"}


id: PBO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035824"}


id: PBO:0075572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 2B","termid":"PBO:0075572"}


id: GO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"positively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascus development","termid":"GO:0075319"}


id: PBO:0053641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 689","termid":"PBO:0053641"}


id: PBO:0049153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAMD1A antisense RNA 1","termid":"PBO:0049153"}


id: PBO:0063149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 2","termid":"PBO:0063149"}


id: GO:0047039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + scytalone = NADPH + H+ + 1,3,6,8-naphthalenetetrol.","definition_xrefs":["MetaCyc:1.1.1.252-RXN","EC:1.1.1.252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tetrahydroxynaphthalene reductase activity","secondary_identifiers":["RHEA:21908"],"synonyms":[{"name":"T4HN reductase activity","type":"related"},{"name":"scytalone:NADP+ delta5-oxidoreductase activity","type":"related"}],"termid":"GO:0047039"}


id: FYPO:0006924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates at or near replication fork barriers is lower than normal.","definition_xrefs":["PMID:31149897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased number of Rad52 foci during vegetative growth","termid":"FYPO:0004516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased number of Rad22 foci at mitotic DNA replication fork barriers","type":"exact"},{"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers during vegetative growth","type":"related"},{"name":"reduced number of Rad52 foci at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006924"}


id: GO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component and mediating entry of the virus into the cell.","definition_xrefs":["UniProtKB-KW:KW-1183","GOC:dph","PMID:7621403","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"virus receptor activity","synonyms":[{"name":"viral receptor activity","type":"exact"}],"termid":"GO:0001618"}


id: PBO:0069261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 517, pseudogene","termid":"PBO:0069261"}


id: PBO:0027065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_transport_phenotype","termid":"PBO:0027065"}


id: GO:0016456
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An RNA-protein complex localized to the X chromosome of males where it is required for the hyper-transcriptional activation of the X chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["Wikipedia:XY_sex-determination_system","GOC:mr","GOC:ma","GOC:mtg_sensu","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation complex","termid":"GO:0046536"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"X chromosome","termid":"GO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"X chromosome located dosage compensation complex, transcription activating","synonyms":[{"name":"dosage compensation complex","type":"broad"}],"termid":"GO:0016456"}


id: PBO:0043329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 4","termid":"PBO:0043329"}


id: PBO:0087635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; required for ribosomal small subunit export from nucleus; required for growth at low temperature","termid":"PBO:0087635"}


id: PBO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUSP5 divergent transcript","termid":"PBO:0045551"}


id: FYPO:0002006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of iron ions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular iron level","synonyms":[{"name":"increased cellular iron ion level","type":"exact"},{"name":"increased cellular iron level during mitotic cell cycle","type":"related"},{"name":"increased cellular iron level during vegetative growth","type":"exact"},{"name":"increased iron accumulation","type":"related"}],"termid":"FYPO:0002006"}


id: PBO:0056649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 16","termid":"PBO:0056649"}


id: PBO:0005428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1, Rgf1","termid":"PBO:0005428"}


id: PBO:0089573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop56","termid":"PBO:0089573"}


id: RO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and an anatomical entity such that the process contributes to the act of creating the structural organization of the anatomical entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_structural_organization_of","termid":"RO:0002355"}


id: PBO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase_A","termid":"PBO:0030051"}


id: GO:1903083
data:
  {"annotated_genes":["SJAG_02761","SJAG_03327","SJAG_04259","SJAG_03540","SJAG_01297","SJAG_02336","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97383,109835,97851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034501"},{"annotations":[114671,104310,96442,99960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed chromosome.","definition_xrefs":["GOC:kmv","GO_REF:0000087","PMID:12707312","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to condensed chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in condensed chromosome","type":"exact"},{"name":"protein localisation to condensed chromosome","type":"exact"},{"name":"protein localization in condensed chromosome","type":"exact"}],"termid":"GO:1903083","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: PBO:0086829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YPL034W is not essential gene","termid":"PBO:0086829"}


id: GO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete microsome (obsolete GO:0005792)","secondary_identifiers":["Wikipedia:Microsome"],"synonyms":[{"name":"microsomal membrane","type":"related"},{"name":"microsome","type":"exact"}],"termid":"GO:0005792"}


id: CHEBI:48828
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt(2+)","termid":"CHEBI:48828"}


id: PBO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 2","termid":"PBO:0044473"}


id: PBO:0065698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 3","termid":"PBO:0065698"}


id: PBO:0067824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 126","termid":"PBO:0067824"}


id: PBO:0063727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 2","termid":"PBO:0063727"}


id: GO:0016174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + hydrogen peroxide.","definition_xrefs":["EC:1.6.3.1","PMID:11822874","PMID:10601291","PMID:10401672","RHEA:11260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","termid":"GO:0050664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NAD(P)H oxidase H2O2-forming activity","secondary_identifiers":["Reactome:R-HSA-5693681","Reactome:R-HSA-9698758"],"synonyms":[{"name":"NAD(P)H oxidase activity","type":"broad"},{"name":"NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"NADPH oxidase","type":"broad"},{"name":"THOX2 activity","type":"narrow"},{"name":"ThOX activity","type":"narrow"},{"name":"dual oxidase activity","type":"related"},{"name":"p138tox","type":"related"},{"name":"thyroid NADPH oxidase activity","type":"narrow"},{"name":"thyroid oxidase 2 activity","type":"narrow"},{"name":"thyroid oxidase activity","type":"narrow"}],"termid":"GO:0016174"}


id: PR:000050549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:34133210","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291","type":"narrow"},{"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050549"}


id: PBO:0043223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 2","termid":"PBO:0043223"}


id: PBO:0067860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 162","termid":"PBO:0067860"}


id: GO:0035309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that subdivides the wing imaginal disc into the wing and notum (body wall) subfields, thus determining whether cells ultimately differentiate wing or notum-specific structures.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing and notum subfield formation","termid":"GO:0035309"}


id: PBO:0003727
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates genes required for anaerobic growth under oxygen-limiting conditions","termid":"PBO:0003727"}


id: SO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding for one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"},{"relation_name":"is_a","term_name":"monocistronic_transcript","termid":"SO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_primary_transcript","synonyms":[{"name":"monocistronic primary transcript","type":"exact"}],"termid":"SO:0000632"}


id: PBO:0058992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanophilin","termid":"PBO:0058992"}


id: GO:1905647
data:
  {"annotated_genes":["SJAG_04718","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96407,97264],"is_not":false,"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of proline from outside of a cell into the cytoplasmic compartment.","definition_xrefs":["PMID:24344203","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline transmembrane transport","termid":"GO:0035524"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04637":null,"SJAG_04718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"proline import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902825"],"synonyms":[{"name":"proline import into cell","type":"exact"}],"termid":"GO:1905647","terms_by_termid":{"GO:1905647":null}}


id: MOD:01794
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the methyl group of a residue containing common isotopes with a 1x(13)C,3x(2)H labeled monomethylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H labeled monomethylated residue","synonyms":[{"name":"Methyl:2H(3)13C(1)","type":"related"}],"termid":"MOD:01794"}


id: PBO:0060946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIA antisense RNA 2","termid":"PBO:0060946"}


id: GO:0051026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which a connection between chromatids assembles, indicating where an exchange of homologous segments has taken place by the crossing-over of non-sister chromatids.","definition_xrefs":["PMID:23396135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome pairing at meiosis","termid":"GO:0007129"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006259","GO:0140013","GO:0006310","GO:0007049"],"is_obsolete":false,"name":"chiasma assembly","termid":"GO:0051026"}


id: PATO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000430 unique (obsolete PATO:0000430)","termid":"PATO:0000430"}


id: PBO:0014288
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meier-Gorlin syndrome","termid":"PBO:0014288"}


id: PBO:0005059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase E2, Lat1 (predicted)","termid":"PBO:0005059"}


id: GO:0051476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phosphoenolpyruvate-dependent sugar phosphotransferase transport specific for mammosylglycerate.","definition_xrefs":["PMID:368051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate-dependent sugar phosphotransferase system","termid":"GO:0009401"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"phosphoenolpyruvate-dependent mannosylglycerate phosphotransferase system","synonyms":[{"name":"mannosylglycerate transport","type":"broad"}],"termid":"GO:0051476"}


id: SO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intron located in the untranslated region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_intron","synonyms":[{"name":"UTR intron","type":"exact"}],"termid":"SO:0000446"}


id: PBO:0053796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1050","termid":"PBO:0053796"}


id: PBO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 20","termid":"PBO:0052506"}


id: PBO:0054864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2278","termid":"PBO:0054864"}


id: PBO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase","termid":"PBO:0005609"}


id: GO:0072118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the pronephros. This process pertains to the physical shaping of a rudimentary structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros structural organization","synonyms":[{"name":"pronephric kidney structural organization","type":"exact"},{"name":"pronephros structural organisation","type":"exact"}],"termid":"GO:0072118"}


id: PBO:0031159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tyrosine_import","termid":"PBO:0031159"}


id: PBO:0072254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 29","termid":"PBO:0072254"}


id: GO:1905016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:1665486"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of isoleucine-tRNA ligase activity (obsolete GO:1905016)","synonyms":[{"name":"down regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down regulation of isoleucine translase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of isoleucine translase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"downregulation of isoleucine translase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"downregulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"inhibition of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of isoleucine translase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucine-transfer RNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"negative regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of isoleucine translase activity","type":"exact"},{"name":"negative regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"negative regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905016"}


id: PBO:0042311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 pseudogene 5","termid":"PBO:0042311"}


id: FYPO:0001058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased amino acid import","synonyms":[{"name":"decreased amino acid import across plasma membrane","type":"exact"},{"name":"decreased amino acid import into cell","type":"exact"},{"name":"decreased amino acid uptake","type":"exact"},{"name":"reduced amino acid import","type":"exact"}],"termid":"FYPO:0001058"}


id: PBO:0084960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myo-inositol transporter; member of the sugar transporter superfamily; expressed constitutively; ITR2 has a paralog, ITR1, that arose from the whole genome duplication","termid":"PBO:0084960"}


id: PBO:0052707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 8","termid":"PBO:0052707"}


id: PBO:0089105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation protein Mtf2","termid":"PBO:0089105"}


id: PBO:0067498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 634, pseudogene","termid":"PBO:0067498"}


id: PBO:0083449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CDC9/YDL164C encoding DNA ligase","termid":"PBO:0083449"}


id: GO:0080141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of jasmonic acid.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"regulation of jasmonic acid metabolic process","termid":"GO:0080140"},{"relation_name":"regulates","term_name":"jasmonic acid biosynthetic process","termid":"GO:0009695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of jasmonic acid biosynthetic process","termid":"GO:0080141"}


id: PBO:0076057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 3","termid":"PBO:0076057"}


id: PBO:0078675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 8-1","termid":"PBO:0078675"}


id: GO:1990918
data:
  {"annotated_genes":["SJAG_01708","SJAG_01076","SJAG_05373","SJAG_01677","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84660,85267,95116,103709,112834],"is_not":false,"summary":null,"term":"GO:1990918"}]},"cv_name":"biological_process","definition":"The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix that contributes to reciprocal meiotic recombination.","definition_xrefs":["PMID:15238514","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01410":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0140013","GO:0006310","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair involved in meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990918","terms_by_termid":{"GO:1990918":null}}


id: GO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lectin-like natural killer cell receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"natural killer cell lectin-like receptor binding","synonyms":[{"name":"KLRC4 receptor binding","type":"narrow"},{"name":"NK cell lectin-like receptor binding","type":"exact"},{"name":"NKG2D receptor binding","type":"narrow"}],"termid":"GO:0046703"}


id: GO:0052923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + 7 isopentenyl diphosphate = 7 diphosphate + all-trans-nonaprenyl diphosphate.","definition_xrefs":["RHEA:27563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R09250","GO:0050347","EC:2.5.1.84","MetaCyc:TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN","KEGG_REACTION:R07267"],"synonyms":[{"name":"(E)-octaprenyl-diphosphate:isopentenyl-diphosphate octaprenyltranstransferase activity","type":"related"},{"name":"SPP synthase activity","type":"broad"},{"name":"SPP-synthase activity","type":"broad"},{"name":"all-trans-nonaprenyl-diphosphate synthase activity","type":"related"},{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"nonaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"polyprenylpyrophosphate synthetase activity","type":"related"},{"name":"solPP synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"},{"name":"solanesyl pyrophosphate synthetase activity","type":"related"},{"name":"solanesyl-diphosphate synthase activity","type":"related"},{"name":"terpenoidallyltransferase activity","type":"related"},{"name":"terpenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-octaprenyltranstransferase activity","type":"related"},{"name":"trans-prenyltransferase activity","type":"related"}],"termid":"GO:0052923"}


id: FYPO:0000781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during vegetative growth","synonyms":[{"name":"decreased transcription during mitotic cell cycle","type":"related"},{"name":"reduced transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0000781"}


id: PBO:0053004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 3","termid":"PBO:0053004"}


id: SO:0001100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with molybdenum ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_molybdenum_ion_contact_site","secondary_identifiers":["BS:00141"],"synonyms":[{"name":"Mo_contact_site","type":"exact"},{"name":"polypeptide molybdenum ion contact site","type":"exact"}],"termid":"SO:0001100"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: PR:Q8NIL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.05 gene.","definition_xrefs":["UniProtKB:Q8NIL4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.05","synonyms":[{"name":"Spom972h-SPBPB21E7.05","type":"exact"}],"termid":"PR:Q8NIL4"}


id: GO:0039655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of a virus between adjacent cells in a multicellular organism using plasmodesmata. Plasmodesma is a fine cytoplasmic channel found in all higher plants, which connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["UniProtKB-KW:KW-0916","VZ:1018"],"gene_count":0,"genotype_count":0,"name":"obsolete transport of virus in host, cell to cell via plasmodesmata (obsolete GO:0039655)","synonyms":[{"name":"spread of virus in host, cell to cell via plasmodesmata","type":"related"},{"name":"viral movement protein","type":"related"}],"termid":"GO:0039655"}


id: PBO:0055620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3059","termid":"PBO:0055620"}


id: PBO:0064355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 2","termid":"PBO:0064355"}


id: PBO:0073572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 5","termid":"PBO:0073572"}


id: PBO:0049235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 6","termid":"PBO:0049235"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_04890","SJAG_04680","SJAG_02637","SJAG_04848","SJAG_02386","SJAG_04181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108191,97019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[92287,100190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[111746,114984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["PMID:9851972","GOC:jl","PMID:24904644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: GO:0046313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphoarginine, a phosphorylated derivative of the amino acid arginine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoarginine metabolic process","termid":"GO:0006604"},{"relation_name":"is_a","term_name":"phosphagen catabolic process","termid":"GO:0042397"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"phosphoarginine catabolic process","synonyms":[{"name":"phosphoarginine breakdown","type":"exact"},{"name":"phosphoarginine catabolism","type":"exact"},{"name":"phosphoarginine degradation","type":"exact"}],"termid":"GO:0046313"}


id: PBO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 1","termid":"PBO:0075319"}


id: GO:2000356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"}


id: PBO:0088861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, protein kinase inhibitor Nif1","termid":"PBO:0088861"}


id: PBO:0052045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1 pseudogene 1","termid":"PBO:0052045"}


id: PBO:0067663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 841, pseudogene","termid":"PBO:0067663"}


id: GO:0045428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"regulates","term_name":"nitric oxide biosynthetic process","termid":"GO:0006809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide biosynthetic process","synonyms":[{"name":"regulation of nitric oxide anabolism","type":"exact"},{"name":"regulation of nitric oxide biosynthesis","type":"exact"},{"name":"regulation of nitric oxide formation","type":"exact"},{"name":"regulation of nitric oxide synthesis","type":"exact"}],"termid":"GO:0045428"}


id: PBO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 1","termid":"PBO:0043003"}


id: GO:0060901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate, frequency or extent of the hair cycle.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hair cycle by canonical Wnt signaling pathway (obsolete GO:0060901)","synonyms":[{"name":"regulation of hair cycle by Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0060901"}


id: PBO:0085423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane t-SNARE; involved in fusion of secretory vesicles at the plasma membrane; syntaxin homolog that is functionally redundant with Sso1p; SSO2 has a paralog, SSO1, that arose from the whole genome duplication","termid":"PBO:0085423"}


id: PBO:0036386
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Saitoella complicata DPS1","termid":"PBO:0036386"}


id: GO:1900210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiolipin metabolic process","termid":"GO:1900208"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiolipin metabolic process","synonyms":[{"name":"activation of cardiolipin metabolic process","type":"narrow"},{"name":"activation of cardiolipin metabolism","type":"exact"},{"name":"activation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"activation of diphosphatidylglycerol metabolism","type":"related"},{"name":"positive regulation of cardiolipin metabolism","type":"exact"},{"name":"positive regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"positive regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"up regulation of cardiolipin metabolic process","type":"exact"},{"name":"up regulation of cardiolipin metabolism","type":"exact"},{"name":"up regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"up regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"up-regulation of cardiolipin metabolic process","type":"exact"},{"name":"up-regulation of cardiolipin metabolism","type":"exact"},{"name":"up-regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"up-regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"upregulation of cardiolipin metabolic process","type":"exact"},{"name":"upregulation of cardiolipin metabolism","type":"exact"},{"name":"upregulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"upregulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900210"}


id: PBO:0085578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 3' mRNA processing; interacts with Ref2p; APCC(Cdh1) substrate; potential Cdc28p substrate","termid":"PBO:0085578"}


id: PBO:0057397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-5","termid":"PBO:0057397"}


id: PBO:0073830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 6 opposite strand","termid":"PBO:0073830"}


id: PBO:0004784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gpd1","termid":"PBO:0004784"}


id: PBO:0058824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8054","termid":"PBO:0058824"}


id: GO:0141068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of epigenetic modifications (imprints) in autosomal (non-sexual) chromosomes during gametogenesis, and propagation of these imprints during the organism's life. Genomic imprinting leads to an asymmetry between the maternal and paternal alleles and differential expression of the corresponding alleles. This can happen through heterochromatin formation or differential chromatin loop formation.","definition_xrefs":["PMID:31782494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"autosome genomic imprinting","synonyms":[{"name":"autosomal genomic imprinting","type":"exact"},{"name":"genomic imprinting of autosomal genes","type":"exact"}],"termid":"GO:0141068"}


id: FYPO:0001064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glycine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycine import","termid":"FYPO:0001063"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased glycine import","synonyms":[{"name":"decreased glycine import across plasma membrane","type":"exact"},{"name":"decreased glycine import during mitotic cell cycle","type":"related"},{"name":"decreased glycine import during vegetative growth","type":"exact"},{"name":"decreased glycine import into cell","type":"exact"},{"name":"decreased glycine uptake","type":"exact"},{"name":"reduced glycine import","type":"exact"}],"termid":"FYPO:0001064"}


id: PBO:0071553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 18","termid":"PBO:0071553"}


id: PBO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 31","termid":"PBO:0075292"}


id: PBO:0070125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 39 pseudogene","termid":"PBO:0070125"}


id: PBO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level","termid":"PBO:0031005"}


id: PBO:0038472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 10","termid":"PBO:0038472"}


id: PATO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a homogeneous substance containing 6.02 x 1023 atoms or molecules by virtue of the amount of 3-dimensional space it occupies.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Molar_volume"],"direct_ancestors":[{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molar volume","termid":"PATO:0001680"}


id: PBO:0055318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2746","termid":"PBO:0055318"}


id: PBO:0031221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vesicle-mediated_transport_during_vegetative_growth","termid":"PBO:0031221"}


id: GO:0002094
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94460,115308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002083"},{"annotations":[94461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047293"},{"annotations":[94462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008412"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of multiple prenyl groups from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"polyprenyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"termid":"GO:0002094","terms_by_termid":{"GO:0002083":null,"GO:0006744":null,"GO:0008412":null,"GO:0047293":null}}


id: PBO:0072633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich protein 1","termid":"PBO:0072633"}


id: internal:interim
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interim","termid":"internal:interim"}


id: GO:1900725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving osmoregulated periplasmic glucan.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan metabolic process","synonyms":[{"name":"osmoregulated periplasmic glucan metabolism","type":"exact"}],"termid":"GO:1900725"}


id: PBO:0027689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_branched,_curved,_elongated_cell","termid":"PBO:0027689"}


id: GO:0019295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"coenzyme M metabolic process","termid":"GO:0019296"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"coenzyme M biosynthetic process","secondary_identifiers":["MetaCyc:P261-PWY"],"synonyms":[{"name":"coenzyme M anabolism","type":"exact"},{"name":"coenzyme M biosynthesis","type":"exact"},{"name":"coenzyme M formation","type":"exact"},{"name":"coenzyme M synthesis","type":"exact"}],"termid":"GO:0019295"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: PBO:0082462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcineurin A; one isoform (the other is Cna1p) of the catalytic subunit of calcineurin, a Ca++/calmodulin-regulated protein phosphatase which regulates Crz1p (a stress-response transcription factor), the other calcineurin subunit is CNB1; regulates the function of Aly1p alpha-arrestin; CMP2 has a paralog, CNA1, that arose from the whole genome duplication","termid":"PBO:0082462"}


id: GO:1903025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:krc","GOC:dph","PMID:20026326","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"}


id: PBO:0058233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4522","termid":"PBO:0058233"}


id: GO:0052897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(8)-acetylspermidine + O2 = 1,3-diaminopropane + 4-acetamidobutanal + H2O2.","definition_xrefs":["RHEA:25972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N8-acetylspermidine:oxygen oxidoreductase (propane-1,3-diamine-forming) activity","secondary_identifiers":["EC:1.5.3.15","MetaCyc:RXN-10463","KEGG_REACTION:R09075"],"synonyms":[{"name":"N(8)-acetylspermidine oxidase (propane-1,3-diamine-forming) activity","type":"broad"}],"termid":"GO:0052897"}


id: GO:0090504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells or yolk.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly","termid":"GO:0090504"}


id: MOD:00876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosamine sugar group through a glycosidic bond.","definition_xrefs":["Unimod:454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"hexosaminylated residue","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"},{"name":"Hexosamines (GalN, GlcN)","type":"exact"}],"termid":"MOD:00876"}


id: PBO:0081474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 347","termid":"PBO:0081474"}


id: PBO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper chaperone for superoxide dismutase","termid":"PBO:0042251"}


id: PBO:0109022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 2","termid":"PBO:0109022"}


id: GO:0010617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the concentration of cytosolic free calcium ion [Ca2+]cyt with a regularity of approximately 24 hours.","definition_xrefs":["PMID:17982000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"circadian regulation of calcium ion oscillation","synonyms":[{"name":"circadian regulation of Ca2+ oscillation","type":"related"},{"name":"circadian regulation of [Ca2+]cyt oscillation","type":"related"},{"name":"circadian regulation of cytosolic calcium ion homeostasis","type":"exact"},{"name":"circadian regulation of cytosolic free calcium ion oscillation","type":"related"}],"termid":"GO:0010617"}


id: GO:0098597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning that occurs through observing the behavior of others.","definition_xrefs":["Wikipedia:Observational_learning&oldid=603524137","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"observational learning","secondary_identifiers":["Wikipedia:Observational_learning"],"termid":"GO:0098597"}


id: PR:P40899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.05","synonyms":[{"name":"Spom972h-isp3","type":"exact"},{"name":"meiotic expression up-regulated protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40899"}


id: GO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to telethonin, a protein found in the Z disc of striated muscle and which is a substrate of the titin kinase.","definition_xrefs":["GOC:mah","PMID:10481174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"telethonin binding","termid":"GO:0031433"}


id: PBO:0041601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 12","termid":"PBO:0041601"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: SO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":".","definition_xrefs":["SO:ma"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000311 computed_feature_by_similarity (obsolete SO:0000311)","termid":"SO:0000311"}


id: PBO:0034334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_contributes_to","termid":"PBO:0034334"}


id: GO:1900550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"N',N'',N'''-triacetylfusarinine C metabolic process","termid":"GO:1900549"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C catabolic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C breakdown","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C catabolism","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C degradation","type":"exact"}],"termid":"GO:1900550"}


id: PBO:0041581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 23","termid":"PBO:0041581"}


id: PBO:0062501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 1","termid":"PBO:0062501"}


id: GO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:tair_curators","PMID:16461380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lead ion","termid":"GO:0010288"}


id: FYPO:0001902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small P-bodies","termid":"FYPO:0001900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small P-bodies during glucose starvation","synonyms":[{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"small P bodies during glucose starvation","type":"exact"},{"name":"small P-bodies during glucose depletion","type":"exact"},{"name":"small P-bodies during glucose deprivation","type":"exact"},{"name":"small P-bodies during glucose limitation","type":"related"},{"name":"small P-body during glucose starvation","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies during glucose starvation","type":"exact"}],"termid":"FYPO:0001902"}


id: GO:0019514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lactose hydrolysis (obsolete GO:0019514)","synonyms":[{"name":"lactose hydrolysis","type":"exact"}],"termid":"GO:0019514"}


id: GO:1905861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an intranuclear rod.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:28074884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"intranuclear rod assembly","synonyms":[{"name":"intranuclear actin rod assembly","type":"exact"},{"name":"intranuclear actin rod formation","type":"exact"},{"name":"intranuclear rod formation","type":"exact"}],"termid":"GO:1905861"}


id: GO:1903680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an acinar cell of sebaceous gland.","definition_xrefs":["GOC:TermGenie","GO_REF:0000086","PMID:18334552","PMID:19944183","PMID:17018284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland cell differentiation","termid":"GO:0001949"},{"relation_name":"is_a","term_name":"acinar cell differentiation","termid":"GO:0090425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell of sebaceous gland differentiation","synonyms":[{"name":"sebocyte differentiation","type":"exact"}],"termid":"GO:1903680"}


id: PBO:0080997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 33","termid":"PBO:0080997"}


id: PBO:0017455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-input_of","termid":"PBO:0017455"}


id: PBO:0075263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 16","termid":"PBO:0075263"}


id: PBO:0071252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 93","termid":"PBO:0071252"}


id: GO:0045950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that inhibits or decreases the rate of DNA recombination during mitosis.","definition_xrefs":["GOC:hjd","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"negatively_regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic recombination","synonyms":[{"name":"down regulation of mitotic recombination","type":"exact"},{"name":"down-regulation of mitotic recombination","type":"exact"},{"name":"downregulation of mitotic recombination","type":"exact"},{"name":"inhibition of mitotic recombination","type":"narrow"},{"name":"negative regulation of recombination within rDNA repeats","type":"narrow"}],"termid":"GO:0045950"}


id: PBO:0007914
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli purA","termid":"PBO:0007914"}


id: GO:1905418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GO_REF:0000058","GOC:krc","GOC:TermGenie","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amoeboid sperm motility","synonyms":[{"name":"activation of ameboid sperm motility","type":"narrow"},{"name":"activation of ameboid sperm movement","type":"narrow"},{"name":"activation of amoeboid sperm motility","type":"narrow"},{"name":"activation of amoeboid sperm movement","type":"narrow"},{"name":"positive regulation of ameboid sperm motility","type":"exact"},{"name":"positive regulation of ameboid sperm movement","type":"exact"},{"name":"positive regulation of amoeboid sperm movement","type":"exact"},{"name":"up regulation of ameboid sperm motility","type":"exact"},{"name":"up regulation of ameboid sperm movement","type":"exact"},{"name":"up regulation of amoeboid sperm motility","type":"exact"},{"name":"up regulation of amoeboid sperm movement","type":"exact"},{"name":"up-regulation of ameboid sperm motility","type":"exact"},{"name":"up-regulation of ameboid sperm movement","type":"exact"},{"name":"up-regulation of amoeboid sperm motility","type":"exact"},{"name":"up-regulation of amoeboid sperm movement","type":"exact"},{"name":"upregulation of ameboid sperm motility","type":"exact"},{"name":"upregulation of ameboid sperm movement","type":"exact"},{"name":"upregulation of amoeboid sperm motility","type":"exact"},{"name":"upregulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905418"}


id: GO:0008842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + a purine nucleoside = monophosphate + a purine mononucleotide.","definition_xrefs":["EC:2.7.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diphosphate-purine nucleoside kinase activity","secondary_identifiers":["MetaCyc:2.7.1.143-RXN"],"synonyms":[{"name":"diphosphate-dependent nucleoside kinase activity","type":"related"},{"name":"diphosphate:purine nucleoside phosphotransferase activity","type":"related"},{"name":"pyrophosphate-dependent nucleoside kinase activity","type":"related"},{"name":"pyrophosphate-purine nucleoside kinase activity","type":"related"}],"termid":"GO:0008842"}


id: PBO:0083682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0083682"}


id: GO:0032375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"negatively_regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of cholesterol transport","synonyms":[{"name":"down regulation of cholesterol transport","type":"exact"},{"name":"down-regulation of cholesterol transport","type":"exact"},{"name":"downregulation of cholesterol transport","type":"exact"},{"name":"inhibition of cholesterol transport","type":"narrow"}],"termid":"GO:0032375"}


id: PBO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein H like","termid":"PBO:0060242"}


id: PBO:0072848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 3","termid":"PBO:0072848"}


id: GO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal tissues.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal immune response","termid":"GO:0002385"},{"relation_name":"is_a","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal tolerance induction","termid":"GO:0002427"}


id: PR:O42645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A secretion-regulating guanine nucleotide exchange factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00488","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 repeat-containing protein C10F6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.04","secondary_identifiers":["UniProtKB:O42645"],"synonyms":[{"name":"Spom972h-SERGEF","type":"exact"}],"termid":"PR:O42645"}


id: GO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + oxaloacetate = malate + pyruvate.","definition_xrefs":["RHEA:10984","EC:1.1.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactate-malate transhydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01447","MetaCyc:LACTATE-MALATE-TRANSHYDROGENASE-RXN"],"synonyms":[{"name":"(S)-lactate:oxaloacetate oxidoreductase activity","type":"related"},{"name":"malate-lactate transhydrogenase activity","type":"related"}],"termid":"GO:0050042"}


id: PBO:0047156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 184 member B","termid":"PBO:0047156"}


id: PBO:0061750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative expression of androgen receptor regulating lncRNA","termid":"PBO:0061750"}


id: GO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is increased in the presence of cGMP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"cGMP-stimulated cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004118"}


id: PBO:0053979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1291","termid":"PBO:0053979"}


id: GO:0060723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell proliferation involved in embryonic placenta development.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"}


id: PBO:0043614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 2","termid":"PBO:0043614"}


id: GO:1902131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-lariciresinol.","definition_xrefs":["PMID:8910615","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(+)-lariciresinol metabolic process","termid":"GO:1902130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(+)-lariciresinol catabolic process","synonyms":[{"name":"(+)-lariciresinol breakdown","type":"exact"},{"name":"(+)-lariciresinol catabolism","type":"exact"},{"name":"(+)-lariciresinol degradation","type":"exact"}],"termid":"GO:1902131"}


id: PBO:0039846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 12","termid":"PBO:0039846"}


id: GO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial depolarization","termid":"GO:0051900"},{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization","termid":"GO:1904180"},{"relation_name":"negatively_regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial depolarization","synonyms":[{"name":"down regulation of mitochondrial depolarization","type":"exact"},{"name":"down-regulation of mitochondrial depolarization","type":"exact"},{"name":"downregulation of mitochondrial depolarization","type":"exact"},{"name":"inhibition of mitochondrial depolarization","type":"narrow"}],"termid":"GO:0051902"}


id: PBO:0067803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 105","termid":"PBO:0067803"}


id: PBO:0013039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA processing protein (predicted)","termid":"PBO:0013039"}


id: GO:0052801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bicyclic nitroimidazoles, imidazole derivatives with two rings and a nitro group attached to one ring.","definition_xrefs":["PMID:16387854","PMID:19039139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitroimidazole metabolic process","termid":"GO:0052802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bicyclic nitroimidazole metabolic process","synonyms":[{"name":"bicyclic nitroimidazole metabolism","type":"exact"}],"termid":"GO:0052801"}


id: GO:0033507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates from other compounds including phenylalanine.","definition_xrefs":["MetaCyc:PWY-2821","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glucosinolate biosynthetic process from phenylalanine","synonyms":[{"name":"glucosinolate anabolism from phenylalanine","type":"exact"},{"name":"glucosinolate biosynthesis from phenylalanine","type":"exact"},{"name":"glucosinolate formation from phenylalanine","type":"exact"},{"name":"glucosinolate synthesis from phenylalanine","type":"exact"}],"termid":"GO:0033507"}


id: GO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}


id: PBO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member B, pseudogene","termid":"PBO:0047083"}


id: PBO:0050892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate early response 3 interacting protein 1","termid":"PBO:0050892"}


id: PBO:0050346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 49","termid":"PBO:0050346"}


id: PBO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol binding ankyrin repeat protein (predicted)","termid":"PBO:0001068"}


id: PR:Q9P7L1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C21C3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.12c","synonyms":[{"name":"Spom972h-SPBC21C3.12c","type":"exact"}],"termid":"PR:Q9P7L1"}


id: GO:0071129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to lipid phosphate phosphohydrolase-3.","definition_xrefs":["PMID:16099422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-LPP3 complex","synonyms":[{"name":"ITGAV-ITGB3-PPAP2B complex","type":"narrow"}],"termid":"GO:0071129"}


id: GO:0045647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"negatively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte differentiation","synonyms":[{"name":"down regulation of erythrocyte differentiation","type":"exact"},{"name":"down-regulation of erythrocyte differentiation","type":"exact"},{"name":"downregulation of erythrocyte differentiation","type":"exact"},{"name":"inhibition of erythrocyte differentiation","type":"narrow"},{"name":"negative regulation of RBC differentiation","type":"exact"},{"name":"negative regulation of red blood cell differentiation","type":"exact"}],"termid":"GO:0045647"}


id: PBO:0048894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 14, pseudogene","termid":"PBO:0048894"}


id: MOD:01279
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:253#H","PubMed:1443554","PubMed:11283024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site H","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01279"}


id: GO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-dependent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"},{"relation_name":"negatively_regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium-dependent cell-cell adhesion","synonyms":[{"name":"down regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"down-regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"downregulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"inhibition of calcium-dependent cell-cell adhesion","type":"narrow"}],"termid":"GO:0046588"}


id: GO:0052096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a syncytium, a multi-nucleate and physiologically active aggregation of fused root cells induced by a symbiotic nematode in a plant host. The syncytium exclusively provides the nematode with nourishment during its sedentary life, for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of syncytium involving giant cell for nutrient acquisition","synonyms":[{"name":"formation by organism of syncytium involving giant cell for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of syncytium involving giant cell for nutrient acquisition from host","type":"related"}],"termid":"GO:0052096"}


id: PBO:0087264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine-rich protein involved in PKC1 signaling pathway; protein kinase C (PKC1) signaling pathway controls cell integrity; overproduction suppresses pkc1 mutations","termid":"PBO:0087264"}


id: PBO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 2","termid":"PBO:0039696"}


id: GO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a bacterial-type specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type RNA polymerase activity (obsolete GO:0001061)","termid":"GO:0001061"}


id: GO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Addition of an amide group from a glycine to a protein amino acid.","definition_xrefs":["UniProtKB-KW:KW-0027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein amidation","synonyms":[{"name":"protein amino acid amidation","type":"exact"}],"termid":"GO:0018032"}


id: PBO:0088312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0088312"}


id: PBO:0089829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop4","termid":"PBO:0089829"}


id: PBO:0011954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele_type","termid":"PBO:0011954"}


id: PBO:0079767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fold modifier 1","termid":"PBO:0079767"}


id: SO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting one base backward.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_frameshift_variant","synonyms":[{"name":"+1 frameshift variant","type":"exact"},{"name":"plus 1 frameshift variant","type":"exact"}],"termid":"SO:0001594"}


id: PBO:0044231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain containing 2","termid":"PBO:0044231"}


id: PBO:0071505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 8","termid":"PBO:0071505"}


id: GO:0019200
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334","SJAG_02596","SJAG_03174","SJAG_02713","SJAG_04276","SJAG_02950","SJAG_03336","SJAG_00039","SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88925,95994,97425,85083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003873"},{"annotations":[100514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003872"},{"annotations":[115023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004856"},{"annotations":[90604,94072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008865"},{"annotations":[109780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004335"},{"annotations":[94073,90605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004340"},{"annotations":[90606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004396"},{"annotations":[90607,94074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019158"},{"annotations":[100405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004747"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to a carbohydrate substrate molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00605":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_02950":null,"SJAG_03174":null,"SJAG_03336":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"carbohydrate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8931653"],"termid":"GO:0019200","terms_by_termid":{"GO:0003872":null,"GO:0003873":null,"GO:0004335":null,"GO:0004340":null,"GO:0004396":null,"GO:0004747":null,"GO:0004856":null,"GO:0008865":null,"GO:0019158":null}}


id: PBO:0055690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LITAF domain containing","termid":"PBO:0055690"}


id: PBO:0058996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX interacting protein like","termid":"PBO:0058996"}


id: GO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + Na+(out) = proline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"proline:sodium symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-118","Reactome:R-HSA-444100","RHEA:28967"],"synonyms":[{"name":"sodium/proline symporter activity","type":"exact"}],"termid":"GO:0005298"}


id: PBO:0050956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma receptor 2","termid":"PBO:0050956"}


id: PBO:0068854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 92, pseudogene","termid":"PBO:0068854"}


id: PBO:0070832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 11","termid":"PBO:0070832"}


id: GO:0071247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chromate","termid":"GO:0046687"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chromate","termid":"GO:0071247"}


id: PBO:0082359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in endoplasmic reticulum degradation; involved specifically in autophagy of cortical and cytoplasmic ER in response to nitrogen starvation or rapamycin treatment; acts with COPII subunit Sfb3p; localizes to the cortical and cytoplasmic ER; similar to human FAM134B, which is also involved in ER autophagy and is associated with sensory neuropathy","termid":"PBO:0082359"}


id: PBO:0066905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 206","termid":"PBO:0066905"}


id: GO:0008441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111576],"is_not":false,"summary":null,"term":"GO:0008441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176606","RHEA:10040","MetaCyc:325-BISPHOSPHATE-NUCLEOTIDASE-RXN","Reactome:R-HSA-8953499"],"synonyms":[{"name":"3'(2'),5' bisphosphate nucleotidase activity","type":"exact"},{"name":"3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate 3'-phosphatase activity","type":"related"},{"name":"DPNPase activity","type":"related"},{"name":"adenosine-3'(2'),5'-bisphosphate 3'(2')-phosphohydrolase activity","type":"related"},{"name":"phosphoadenylate 3'-nucleotidase activity","type":"related"}],"termid":"GO:0008441","terms_by_termid":{"GO:0008441":null}}


id: PBO:0079321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 11","termid":"PBO:0079321"}


id: PBO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB binding protein","termid":"PBO:0043878"}


id: GO:0097730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable array of axonemal microtubules but does not contain molecular motors.","definition_xrefs":["PMID:17009929","PMID:20144998","PMID:22118931","GOC:dgh","GOC:kmv","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"non-motile cilium","secondary_identifiers":["GO:0031513"],"synonyms":[{"name":"immotile cilium","type":"exact"},{"name":"immotile primary cilium","type":"related"},{"name":"nonmotile cilium","type":"exact"},{"name":"nonmotile primary cilia","type":"related"},{"name":"nonmotile primary cilium","type":"related"},{"name":"sensory cilium","type":"related"}],"termid":"GO:0097730"}


id: FYPO:0005854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin cables is increased.","definition_xrefs":["PomBase:mah","PMID:12764130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased actin cable assembly","synonyms":[{"name":"actin bundling increased","type":"related"},{"name":"increased actin bundling","type":"related"},{"name":"increased actin cable assembly during mitotic cell cycle","type":"related"},{"name":"increased actin cable assembly during vegetative growth","type":"exact"},{"name":"increased formin-nucleated actin cable assembly","type":"exact"}],"termid":"FYPO:0005854"}


id: PBO:0066544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 8","termid":"PBO:0066544"}


id: PBO:0071242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 83","termid":"PBO:0071242"}


id: GO:0044204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dense fibrillar network lying on the inner side of the host nuclear membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear matrix","termid":"GO:0044204"}


id: PBO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 7","termid":"PBO:0071751"}


id: GO:0007507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.","definition_xrefs":["GOC:jid","UBERON:0000948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"circulatory system development","termid":"GO:0072359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart development","secondary_identifiers":["Wikipedia:Heart_development","GO:0007511"],"synonyms":[{"name":"cardiac development","type":"related"},{"name":"dorsal vessel development","type":"narrow"}],"termid":"GO:0007507"}


id: GO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a jasmonate + an L-alpha-amino acid + ATP = a jasmonyl-L-amino acid + AMP + diphosphate + H+. In Arabidopsis, isoleucine is the principal amino acid that conjugates with JA to form JA (JA-Ile). Other amino acid can be conjugated with JA such as valine, leucine, and phenylalanine.","definition_xrefs":["PMID:33821356","PMID:17291501","PMID:15258265","RHEA:55772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"jasmonoyl-L-amino acid ligase activity","secondary_identifiers":["EC:6.3.2.52"],"synonyms":[{"name":"ja-amino synthetase activity","type":"exact"},{"name":"jasmonate-amido synthetase activity","type":"exact"},{"name":"jasmonate-amino acid conjugate synthetase activity","type":"exact"},{"name":"jasmonate-amino acid synthetase activity","type":"exact"},{"name":"jasmonate-amino synthetase activity","type":"exact"},{"name":"jasmonate:amino acid synthetase activity","type":"exact"},{"name":"jasmonic acid-amino synthetase activity","type":"exact"},{"name":"jasmonyl-amino synthetase activity","type":"exact"}],"termid":"GO:0080123"}


id: GO:0038081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in osmosensory signaling pathway (obsolete GO:0038081)","synonyms":[{"name":"MAP kinase kinase kinase activity involved in osmosensory signalling pathway","type":"exact"},{"name":"MAP3K activity involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK activity involved in osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038081"}


id: PBO:0075768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 1","termid":"PBO:0075768"}


id: GO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oleic acid","termid":"GO:0034201"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oleic acid","synonyms":[{"name":"cellular response to oleate","type":"exact"}],"termid":"GO:0071400"}


id: GO:0102212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-4-deoxy-Delta(4)-GlcpA-(1->3)-beta-D-GalpNAc6S + H2O = 5-dehydro-4-deoxy-D-glucuronate + N-acetyl-beta-D-galactosamine 6-sulfate.","definition_xrefs":["GOC:pz","EC:3.2.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"unsaturated chondroitin disaccharide hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12177","RHEA:31647"],"termid":"GO:0102212"}


id: FYPO:0008049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}


id: PR:O42912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tad1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.06","synonyms":[{"name":"Spom972h-tad1","type":"exact"},{"name":"tRNA-specific adenosine-37 deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42912"}


id: GO:1903430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell maturation.","definition_xrefs":["GO_REF:0000058","PMID:17459944","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"negatively_regulates","term_name":"cell maturation","termid":"GO:0048469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell maturation","synonyms":[{"name":"down regulation of cell maturation","type":"exact"},{"name":"down regulation of functional differentiation","type":"related"},{"name":"down-regulation of cell maturation","type":"exact"},{"name":"down-regulation of functional differentiation","type":"related"},{"name":"downregulation of cell maturation","type":"exact"},{"name":"downregulation of functional differentiation","type":"related"},{"name":"inhibition of cell maturation","type":"narrow"},{"name":"inhibition of functional differentiation","type":"related"},{"name":"negative regulation of functional differentiation","type":"related"}],"termid":"GO:1903430"}


id: GO:0015104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"antimonite transmembrane transporter activity","termid":"GO:0015104"}


id: PBO:0041497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 57","termid":"PBO:0041497"}


id: GO:0014733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle adaptation","synonyms":[{"name":"regulation of skeletal muscle plasticity","type":"related"}],"termid":"GO:0014733"}


id: PBO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unlike the human ortholog, this protein is not associated with the NADH complex. Fission yeast does not have the other 40 subunits that are present in that complex in mammals. See associated reference for more information on the human protein","termid":"PBO:0034749"}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: PBO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0000270"}


id: PBO:0048052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 1","termid":"PBO:0048052"}


id: GO:0120245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound metabolic process","termid":"GO:0120244"},{"relation_name":"is_a","term_name":"acetylenic compound catabolic process","termid":"GO:0120248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal acetylenic compound catabolic process","synonyms":[{"name":"terminal alkyne substituted compound breakdown","type":"exact"},{"name":"terminal alkyne substituted compound catabolic process","type":"exact"},{"name":"terminal alkyne substituted compound catabolism","type":"exact"},{"name":"terminal alkyne substituted compound degradation","type":"exact"}],"termid":"GO:0120245"}


id: PBO:0046674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESX homeobox 1","termid":"PBO:0046674"}


id: PBO:0051110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-58","termid":"PBO:0051110"}


id: GO:0098679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of carbohydrate catabloism.","definition_xrefs":["PMID:16408318"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate catabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0098679)","synonyms":[{"name":"regulation of carbohydrate catabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0098679"}


id: PBO:0062825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSGEPL1 antisense RNA 1","termid":"PBO:0062825"}


id: RO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of causally upstream of or within","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"RO:0002501"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of_or_within","termid":"RO:0002427"}


id: PBO:0017990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GDP/GTP exchange factor","termid":"PBO:0017990"}


id: GO:0106222
data:
  {"annotated_genes":["SJAG_04942","SJAG_00145","SJAG_04601","SJAG_00701","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88896,91232,100353,107903,114124],"is_not":false,"summary":null,"term":"GO:0106222"}]},"cv_name":"molecular_function","definition":"Binding to a long noncoding RNA (lncRNA).","definition_xrefs":["PMID:25578728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00701":null,"SJAG_02622":null,"SJAG_04601":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lncRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long noncoding RNA binding","type":"exact"}],"termid":"GO:0106222","terms_by_termid":{"GO:0106222":null}}


id: RO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x actively participates in y if and only if x participates in y and x realizes some active role","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actively_participates_in","termid":"RO:0002217"}


id: GO:0046073
data:
  {"annotated_genes":["SJAG_03771","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104422,85481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dTMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTMP metabolism","type":"exact"}],"termid":"GO:0046073","terms_by_termid":{"GO:0006231":null}}


id: PBO:0031771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_fermentation","termid":"PBO:0031771"}


id: GO:0009666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the outer membrane of a plastid.","definition_xrefs":["GOC:jl","GOC:ai","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plastid outer membrane organization","synonyms":[{"name":"plastid outer membrane organisation","type":"exact"},{"name":"plastid outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0009666"}


id: GO:1900410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900410)","termid":"GO:1900410"}


id: FYPO:0001500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cytochalasin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on cytochalasin B","synonyms":[{"name":"normal cell population growth in presence of cytochalasin B","type":"exact"},{"name":"normal cell population growth on cytochalasin B","type":"exact"},{"name":"normal cellular response to cytochalasin B","type":"related"},{"name":"normal vegetative cell population growth on cytochalasin B","type":"exact"}],"termid":"FYPO:0001500"}


id: GO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17875938","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035949)","synonyms":[{"name":"positive regulation of gluconeogenesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of gluconeogenesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of glucose biosynthetic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035949"}


