# terms

id: GO:0140495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell migration-dependent mechanism for releasing cellular contents.","definition_xrefs":["PMID:25342562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"migracytosis","termid":"GO:0140495"}


id: GO:1902217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an erythrocyte.","definition_xrefs":["PMID:14569084","GOC:BHF","GOC:TermGenie","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte apoptotic process","synonyms":[{"name":"RBC apoptotic process","type":"exact"},{"name":"erythrocyte apoptosis","type":"narrow"},{"name":"red blood cell apoptosis","type":"narrow"},{"name":"RBC apoptosis","type":"narrow"},{"name":"red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902217"}


id: PBO:0003921
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates mfm1","termid":"PBO:0003921"}


id: GO:0005042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:15960985","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"netrin receptor activity","termid":"GO:0005042"}


id: GO:0003879
data:
  {"annotated_genes":["SJAG_04747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90823],"is_not":false,"summary":null,"term":"GO:0003879"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + diphosphate = ATP + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ATP phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ATPPHOSPHORIBOSYLTRANS-RXN","RHEA:18473"],"synonyms":[{"name":"1-(5-phospho-D-ribosyl)-ATP:diphosphate phospho-alpha-D-ribosyl-transferase activity","type":"related"},{"name":"adenosine triphosphate phosphoribosyltransferase activity","type":"related"},{"name":"phosphoribosyl ATP synthetase activity","type":"related"},{"name":"phosphoribosyl ATP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"phosphoribosyl-ATP diphosphorylase activity","type":"related"},{"name":"phosphoribosyl-ATP pyrophosphorylase activity","type":"related"},{"name":"phosphoribosyl-ATP:pyrophosphate-phosphoribosyl phosphotransferase activity","type":"related"},{"name":"phosphoribosyladenosine triphosphate pyrophosphorylase activity","type":"related"},{"name":"phosphoribosyladenosine triphosphate synthetase activity","type":"related"},{"name":"phosphoribosyladenosine triphosphate:pyrophosphate phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0003879","terms_by_termid":{"GO:0003879":null}}


id: PATO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological state","termid":"PATO:0001912"}


id: PBO:0057957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-1","termid":"PBO:0057957"}


id: GO:1904830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aortic smooth muscle cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:22034194","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aortic smooth muscle cell differentiation","termid":"GO:1904829"},{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905064"},{"relation_name":"negatively_regulates","term_name":"aortic smooth muscle cell differentiation","termid":"GO:0035887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aortic smooth muscle cell differentiation","synonyms":[{"name":"down regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"down-regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"downregulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"inhibition of aortic smooth muscle cell differentiation","type":"narrow"}],"termid":"GO:1904830"}


id: GO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylguanosine 5'-triphospho-5'-polynucleotide + H2O = 7-methylguanosine 5'-phosphate + polynucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activity (obsolete GO:0050072)","synonyms":[{"name":"M(7)G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:0050072"}


id: GO:0090342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell aging (obsolete GO:0090342)","termid":"GO:0090342"}


id: GO:0035603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which contributes to hemopoiesis.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in hemopoiesis","synonyms":[{"name":"FGF receptor signaling pathway involved in hematopoiesis","type":"exact"},{"name":"FGFR signaling pathway involved in hematopoiesis","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in hematopoiesis","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in hemopoiesis","type":"exact"}],"termid":"GO:0035603"}


id: GO:0097342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose core components are the receptor-interacting serine/threonine-protein kinases RIPK1 and RIPK3 (also called RIP1 and RIP3). Formation of the ripoptosome can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22265414","PMID:22274400","GOC:bhm","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"ripoptosome","synonyms":[{"name":"TNFR1 complex II","type":"narrow"},{"name":"Tnfr1-CII","type":"narrow"},{"name":"necrosome","type":"related"}],"termid":"GO:0097342"}


id: PBO:0090180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sly1","termid":"PBO:0090180"}


id: PBO:0051187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR15-7 (pseudogene)","termid":"PBO:0051187"}


id: PR:Q9P7G4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metalloendopeptidase OMA1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22726:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metalloendopeptidase OMA1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP14E8.04","secondary_identifiers":["UniProtKB:Q9P7G4"],"synonyms":[{"name":"SPAP14E8.04","type":"related"},{"name":"Spom972h-OMA1","type":"exact"}],"termid":"PR:Q9P7G4"}


id: PBO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase (predicted)","termid":"PBO:0001856"}


id: GO:1900280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.","definition_xrefs":["GOC:TermGenie","GOC:pr","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell costimulation","termid":"GO:1900279"},{"relation_name":"is_a","term_name":"negative regulation of T cell costimulation","termid":"GO:2000524"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, alpha-beta T cell costimulation","termid":"GO:0035783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"down regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"down-regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"downregulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"inhibition of CD4-positive, alpha beta T cell costimulation","type":"narrow"},{"name":"negative regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:1900280"}


id: GO:0052626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + ATP + amino acid = benzoyl amino acid conjugate + AMP + diphosphate.","definition_xrefs":["PMID:19189963","MetaCyc:RXN-10886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzoate amino acid synthetase activity","synonyms":[{"name":"benzoyl amino acid synthetase activity","type":"exact"}],"termid":"GO:0052626"}


id: PBO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 188B, pseudogene","termid":"PBO:0042117"}


id: GO:0052401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of reactive oxygen species as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont reactive oxygen species production (obsolete GO:0052401)","synonyms":[{"name":"activation by organism of defense-related symbiont AOS production","type":"exact"},{"name":"activation by organism of defense-related symbiont ROI production","type":"exact"},{"name":"activation by organism of defense-related symbiont ROS production","type":"exact"},{"name":"activation by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"activation by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"activation by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxidative species production","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"activation by organism of defense-related symbiont respiratory burst","type":"exact"},{"name":"induction by organism of defense-related symbiont AOS production","type":"exact"},{"name":"induction by organism of defense-related symbiont ROI production","type":"exact"},{"name":"induction by organism of defense-related symbiont ROS production","type":"exact"},{"name":"induction by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"induction by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"induction by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"induction by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"induction by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"induction by organism of defense-related symbiont respiratory burst","type":"exact"}],"termid":"GO:0052401"}


id: PBO:0038550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 5","termid":"PBO:0038550"}


id: GO:0032517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of superoxide dismutase 1 (SOD1) with calcineurin; complex formation is implicated in activation of calcineurin by SOD1.","definition_xrefs":["GOC:mah","PMID:17324120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SOD1-calcineurin complex","termid":"GO:0032517"}


id: GO:1901614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of terminal button organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of terminal button organization","termid":"GO:2000331"},{"relation_name":"positively_regulates","term_name":"terminal button organization","termid":"GO:0072553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of terminal button organization","synonyms":[{"name":"activation of bouton organization","type":"narrow"},{"name":"activation of presynaptic bouton organization","type":"narrow"},{"name":"activation of synaptic bouton organization","type":"narrow"},{"name":"activation of terminal bouton organization","type":"narrow"},{"name":"activation of terminal button organisation","type":"narrow"},{"name":"activation of terminal button organization","type":"narrow"},{"name":"positive regulation of bouton organization","type":"exact"},{"name":"positive regulation of presynaptic bouton organization","type":"exact"},{"name":"positive regulation of synaptic bouton organization","type":"exact"},{"name":"positive regulation of terminal bouton organization","type":"exact"},{"name":"positive regulation of terminal button organisation","type":"exact"},{"name":"up regulation of bouton organization","type":"exact"},{"name":"up regulation of presynaptic bouton organization","type":"exact"},{"name":"up regulation of synaptic bouton organization","type":"exact"},{"name":"up regulation of terminal bouton organization","type":"exact"},{"name":"up regulation of terminal button organisation","type":"exact"},{"name":"up regulation of terminal button organization","type":"exact"},{"name":"up-regulation of bouton organization","type":"exact"},{"name":"up-regulation of presynaptic bouton organization","type":"exact"},{"name":"up-regulation of synaptic bouton organization","type":"exact"},{"name":"up-regulation of terminal bouton organization","type":"exact"},{"name":"up-regulation of terminal button organisation","type":"exact"},{"name":"up-regulation of terminal button organization","type":"exact"},{"name":"upregulation of bouton organization","type":"exact"},{"name":"upregulation of presynaptic bouton organization","type":"exact"},{"name":"upregulation of synaptic bouton organization","type":"exact"},{"name":"upregulation of terminal bouton organization","type":"exact"},{"name":"upregulation of terminal button organisation","type":"exact"},{"name":"upregulation of terminal button organization","type":"exact"}],"termid":"GO:1901614"}


id: GO:1905376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["PMID:26722473","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"is_a","term_name":"negative regulation of electron transfer activity","termid":"GO:1904733"},{"relation_name":"is_a","term_name":"regulation of cytochrome-c oxidase activity","termid":"GO:1904959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytochrome-c oxidase activity","synonyms":[{"name":"down regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"down regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"down regulation of cytochrome a3 activity","type":"narrow"},{"name":"down regulation of cytochrome aa3 activity","type":"narrow"},{"name":"down regulation of cytochrome c oxidase activity","type":"exact"},{"name":"down regulation of cytochrome oxidase activity","type":"related"},{"name":"down regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"down regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"down regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"down regulation of indophenol oxidase","type":"narrow"},{"name":"down regulation of indophenolase","type":"narrow"},{"name":"down regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"down-regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"down-regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"down-regulation of cytochrome a3 activity","type":"narrow"},{"name":"down-regulation of cytochrome aa3 activity","type":"narrow"},{"name":"down-regulation of cytochrome c oxidase activity","type":"exact"},{"name":"down-regulation of cytochrome oxidase activity","type":"related"},{"name":"down-regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"down-regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"down-regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"down-regulation of indophenol oxidase","type":"narrow"},{"name":"down-regulation of indophenolase","type":"narrow"},{"name":"down-regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"downregulation of NADH cytochrome c oxidase","type":"exact"},{"name":"downregulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"downregulation of cytochrome a3 activity","type":"narrow"},{"name":"downregulation of cytochrome aa3 activity","type":"narrow"},{"name":"downregulation of cytochrome c oxidase activity","type":"exact"},{"name":"downregulation of cytochrome oxidase activity","type":"related"},{"name":"downregulation of cytochrome-c oxidase activity","type":"exact"},{"name":"downregulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"downregulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"downregulation of indophenol oxidase","type":"narrow"},{"name":"downregulation of indophenolase","type":"narrow"},{"name":"downregulation of warburg's respiratory enzyme activity","type":"related"},{"name":"inhibition of NADH cytochrome c oxidase","type":"narrow"},{"name":"inhibition of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"inhibition of cytochrome a3 activity","type":"narrow"},{"name":"inhibition of cytochrome aa3 activity","type":"narrow"},{"name":"inhibition of cytochrome c oxidase activity","type":"narrow"},{"name":"inhibition of cytochrome oxidase activity","type":"related"},{"name":"inhibition of cytochrome-c oxidase activity","type":"narrow"},{"name":"inhibition of ferrocytochrome c oxidase","type":"narrow"},{"name":"inhibition of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"inhibition of indophenol oxidase","type":"narrow"},{"name":"inhibition of indophenolase","type":"narrow"},{"name":"inhibition of warburg's respiratory enzyme activity","type":"related"},{"name":"negative regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"negative regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"negative regulation of cytochrome a3 activity","type":"narrow"},{"name":"negative regulation of cytochrome aa3 activity","type":"narrow"},{"name":"negative regulation of cytochrome c oxidase activity","type":"exact"},{"name":"negative regulation of cytochrome oxidase activity","type":"related"},{"name":"negative regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"negative regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"negative regulation of indophenol oxidase","type":"narrow"},{"name":"negative regulation of indophenolase","type":"narrow"},{"name":"negative regulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1905376"}


id: GO:0007146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form small, electron dense structures in association with meiotic chromosomes.","definition_xrefs":["PMID:9334324","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0065003","GO:0006310","GO:0006281","GO:0044085"],"is_obsolete":false,"name":"meiotic recombination nodule assembly","termid":"GO:0007146"}


id: GO:1901770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of daunorubicin.","definition_xrefs":["GOC:yaf","PMID:7601857","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"daunorubicin catabolic process","synonyms":[{"name":"daunorubicin breakdown","type":"exact"},{"name":"daunorubicin catabolism","type":"exact"},{"name":"daunorubicin degradation","type":"exact"}],"termid":"GO:1901770"}


id: PBO:0067644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 818, pseudogene","termid":"PBO:0067644"}


id: PBO:0074787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 8","termid":"PBO:0074787"}


id: PBO:0073916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 6","termid":"PBO:0073916"}


id: PBO:0062510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 2","termid":"PBO:0062510"}


id: PBO:0029754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_metabolic_process","termid":"PBO:0029754"}


id: PBO:0064101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL2 divergent transcript","termid":"PBO:0064101"}


id: PBO:0003214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT organizer Mto2","termid":"PBO:0003214"}


id: PR:Q09857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general vesicular transport factor p115 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01822","PANTHER:PTHR10013:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular protein transport protein uso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.03c","secondary_identifiers":["UniProtKB:Q09857"],"synonyms":[{"name":"Spom972h-USO1","type":"exact"}],"termid":"PR:Q09857"}


id: FYPO:0001310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal viability in stationary phase","synonyms":[{"name":"normal cell population viability in stationary phase","type":"exact"},{"name":"normal chronological cell aging","type":"related"},{"name":"normal chronological lifespan","type":"related"}],"termid":"FYPO:0001310"}


id: PBO:0056269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2 activating motif and SAP domain containing transcriptional regulator","termid":"PBO:0056269"}


id: PBO:0090938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 4 Pre1","termid":"PBO:0090938"}


id: PBO:0029166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation","termid":"PBO:0029166"}


id: GO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-2 complex","synonyms":[{"name":"laminin-211 complex","type":"exact"}],"termid":"GO:0005607"}


id: GO:0014882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of myofibrils. A myofibril is the contractile element of skeletal and cardiac muscle. It is a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","GOC:tb","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hyperplasia","termid":"GO:0014738"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibril number","synonyms":[{"name":"change of myofibril number","type":"exact"}],"termid":"GO:0014882"}


id: FYPO:0005222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PMID:23028377","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3 localization to chromatin at protein coding gene","synonyms":[{"name":"decreased histone H3 localisation to chromatin at protein coding gene","type":"exact"},{"name":"decreased histone H3 localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3 localization to chromatin at protein-coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3 localization to chromatin at protein coding gene","type":"exact"}],"termid":"FYPO:0005222"}


id: GO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the meiotic cell cycle.","definition_xrefs":["GOC:ai","GOC:tb","PMID:10871297","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle (obsolete GO:0051441)","synonyms":[{"name":"APC activation during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity involved in meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity of APC during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase promoting complex during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase-promoting complex during meiotic cell cycle","type":"related"},{"name":"anaphase promoting complex activation during meiotic cell cycle","type":"related"},{"name":"anaphase-promoting complex activation during meiotic cell cycle","type":"related"},{"name":"meiotic APC activation","type":"exact"},{"name":"meiotic APC activator","type":"narrow"},{"name":"meiotic SCF complex activator","type":"narrow"},{"name":"meiotic anaphase promoting complex activation","type":"related"},{"name":"meiotic anaphase promoting complex activator","type":"narrow"},{"name":"meiotic anaphase-promoting complex activator","type":"narrow"},{"name":"meiotic ubiquitin ligase activator","type":"narrow"},{"name":"positive regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"positive regulation of ubiquitin-protein ligase activity during meiotic cell cycle","type":"related"},{"name":"stimulation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"up-regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"upregulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"}],"termid":"GO:0051441"}


id: PBO:0041210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 2","termid":"PBO:0041210"}


id: GO:0010446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH > 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:go_curators","GOC:tb","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkaline pH","synonyms":[{"name":"response to alkalinity","type":"broad"},{"name":"response to basic pH","type":"exact"}],"termid":"GO:0010446"}


id: GO:0016414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an octanoyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"octanoyltransferase activity","termid":"GO:0016415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"O-octanoyltransferase activity","termid":"GO:0016414"}


id: GO:0034606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response by the male to a hermaphrodite after initial contact following mate finding. The male stops forward locomotion, presses the ventral side of his tail against his partner's body, and begins moving backward along the hermaphrodite. Male response behavior is initiated when sensory neurons located in the rays of his tail contact a potential mate.","definition_xrefs":["PMID:18050467","WB_REF:WBPaper00002109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hermaphrodite contact","termid":"GO:0034606"}


id: PBO:0057476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 595","termid":"PBO:0057476"}


id: GO:0090014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a leaflet from unspecified parts. A leaflet is one of the ultimate segments of a compound leaf.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaflet formation","termid":"GO:0090014"}


id: PBO:0079921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase","termid":"PBO:0079921"}


id: GO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(+)-allantoin = (R)-(-)-allantoin.","definition_xrefs":["EC:5.1.99.3","RHEA:10804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"allantoin racemase activity","secondary_identifiers":["KEGG_REACTION:R03925","MetaCyc:ALLANTOIN-RACEMASE-RXN"],"termid":"GO:0047653"}


id: PBO:0040474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attractin like 1","termid":"PBO:0040474"}


id: PBO:0018132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV assembly protein Cox19 (predicted)","termid":"PBO:0018132"}


id: GO:0035042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replacement of sperm-specific chromosomal proteins with somatic histones, to allow the paternal genome to acquire a nucleosomal chromatin organization compatible with nuclear activity.","definition_xrefs":["PMID:11735001","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete fertilization, exchange of chromosomal proteins (obsolete GO:0035042)","synonyms":[{"name":"sperm-specific histone exchange","type":"exact"},{"name":"sperm-specific histone replacement","type":"exact"}],"termid":"GO:0035042"}


id: GO:0035216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the haltere imaginal disc over time, from its initial formation through to its metamorphosis to form the adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere disc development","termid":"GO:0035216"}


id: GO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-tryptophan, to form peptidyl-L-3-hydroxytryptophan.","definition_xrefs":["RESID:AA0322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tryptophan hydroxylation","termid":"GO:0045325"}


id: PBO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pcr1","termid":"PBO:0002432"}


id: SO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_gene","synonyms":[{"name":"engineered gene","type":"exact"}],"termid":"SO:0000280"}


id: GO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via the activity of voltage-gated calcium channels.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051929)","synonyms":[{"name":"activation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via voltage gated calcium channel","type":"exact"},{"name":"stimulation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via voltage gated calcium channel","type":"exact"}],"termid":"GO:0051929"}


id: FYPO:0004448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is observed in a particular location where it is not normally found during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"},{"relation_name":"output_of","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized protein during meiotic cell cycle","synonyms":[{"name":"mislocalised protein during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004448"}


id: PBO:0075418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 5","termid":"PBO:0075418"}


id: PBO:0029780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0029780"}


id: PBO:0056797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofusin 1","termid":"PBO:0056797"}


id: PBO:0080843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 7","termid":"PBO:0080843"}


id: PBO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycine transporter Hem25 (predicted)","termid":"PBO:0031879"}


id: PBO:0068694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 75, pseudogene","termid":"PBO:0068694"}


id: PBO:0029402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029402"}


id: FYPO:0005982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of potassium ions out of a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal potassium export","synonyms":[{"name":"abnormal cellular potassium export","type":"exact"},{"name":"abnormal potassium export during mitotic cell cycle","type":"related"},{"name":"abnormal potassium export during vegetative growth","type":"exact"},{"name":"abnormal potassium export from cell","type":"exact"},{"name":"abnormal potassium ion export","type":"exact"},{"name":"abnormal potassium ion export across plasma membrane","type":"exact"}],"termid":"FYPO:0005982"}


id: PBO:0002969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002969"}


id: PBO:0052186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 18","termid":"PBO:0052186"}


id: GO:0051350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lyase activity","synonyms":[{"name":"down regulation of lyase activity","type":"exact"},{"name":"down-regulation of lyase activity","type":"exact"},{"name":"downregulation of lyase activity","type":"exact"},{"name":"inhibition of lyase activity","type":"narrow"},{"name":"lyase inhibitor","type":"exact"}],"termid":"GO:0051350"}


id: GO:0015291
data:
  {"annotated_genes":["SJAG_03608","SJAG_04673","SJAG_02463","SJAG_02958","SJAG_04714","SJAG_00233","SJAG_03606","SJAG_01183","SJAG_03951","SJAG_00612","SJAG_03820","SJAG_02780","SJAG_04616","SJAG_03960","SJAG_02779","SJAG_03595","SJAG_04905","SJAG_00057","SJAG_01145","SJAG_04406","SJAG_04241","SJAG_03401","SJAG_04506","SJAG_01406","SJAG_00547","SJAG_01059","SJAG_02050","SJAG_00339","SJAG_01541","SJAG_00275","SJAG_01033","SJAG_04698","SJAG_01960","SJAG_00276","SJAG_04028","SJAG_01872","SJAG_04096","SJAG_04068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108302,89401,113054,85089,89169,92564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015297"},{"annotations":[106941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[111597,86796,94398,87280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[72114,110211,110218,113228,106697,99040,75321,88559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[87851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[113232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[87281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[88639,94119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[108768,99844,112548,100661,111831,105751,90116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[101736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[106170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[85424,92813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[107009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[88131,88137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[108309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[84566,91615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy, not direct ATP coupling. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729","PMID:10839820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00233":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01406":null,"SJAG_01541":null,"SJAG_01872":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04241":null,"SJAG_04406":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04673":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["TC:2.A","GO:0015290","GO:0015353","GO:0015404","GO:0015570"],"synonyms":[{"name":"active transporter","type":"broad"},{"name":"coupled carrier","type":"exact"},{"name":"electrochemical potential-driven transporter activity","type":"exact"},{"name":"energizer of outer membrane receptor-mediated transport activity","type":"narrow"},{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"},{"name":"heavy metal ion porter activity","type":"narrow"},{"name":"ion-gradient-driven energizer activity","type":"narrow"},{"name":"multidrug endosomal transmembrane transporter activity","type":"narrow"},{"name":"nitrite/nitrate porter activity","type":"narrow"},{"name":"porter activity","type":"exact"},{"name":"porters","type":"exact"},{"name":"secondary carrier-type facilitators","type":"exact"}],"termid":"GO:0015291","terms_by_termid":{"GO:0005315":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005371":null,"GO:0005452":null,"GO:0005471":null,"GO:0008271":null,"GO:0008506":null,"GO:0010486":null,"GO:0015295":null,"GO:0015297":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015505":null,"GO:0034216":null,"GO:0071913":null,"GO:0097434":null,"GO:0140987":null}}


id: GO:0051012
data:
  {"annotated_genes":["SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95282],"is_not":false,"summary":null,"term":"GO:0051012"},{"annotations":[95283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031534"},{"annotations":[97490],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0062168"},{"annotations":[95291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031535"}]},"cv_name":"biological_process","definition":"The movement of one microtubule along another microtubule.","definition_xrefs":["PMID:14614826","PMID:14557818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule translocation","type":"exact"}],"termid":"GO:0051012","terms_by_termid":{"GO:0031534":null,"GO:0031535":null,"GO:0051012":null,"GO:0062168":null}}


id: PBO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 1","termid":"PBO:0070893"}


id: GO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + 1,6-alpha-D-glucosyl(m) = 1,4-alpha-D-glucosyl(n-1) + 1,6-alpha-D-glucosyl(m+1).","definition_xrefs":["MetaCyc:DEXTRIN-DEXTRANASE-RXN","EC:2.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"dextrin dextranase activity","secondary_identifiers":["RHEA:14625"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,6-alpha-D-glucan 6-alpha-D-glucosyltransferase activity","type":"related"},{"name":"dextran dextrinase activity","type":"related"},{"name":"dextrin 6-glucosyltransferase activity","type":"related"}],"termid":"GO:0050103"}


id: PBO:0051157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-37 (pseudogene)","termid":"PBO:0051157"}


id: GO:0120194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the dehiscence of an anther to release the pollen grains contained within it.","definition_xrefs":["PMID:30911018","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"anther dehiscence","termid":"GO:0009901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anther dehiscence","termid":"GO:0120194"}


id: PBO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates rhp51","termid":"PBO:0002102"}


id: PBO:0077969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 21-1","termid":"PBO:0077969"}


id: PBO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 7","termid":"PBO:0061215"}


id: PBO:0084978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is up-regulated in the presence of furfural and 5-hydroxymethylfurfural, which are compounds generated during lignocellulosic biomass pre-treatment; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0084978"}


id: PBO:0083657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceIV; involved in intron mobility; encoded by a mobile group I intron within the mitochondrial COX1 gene","termid":"PBO:0083657"}


id: PBO:0083386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ENT1/YDL161W, a verified gene involved in endocytosis and actin cortical patch assembly","termid":"PBO:0083386"}


id: PBO:0063215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionyl-CoA carboxylase subunit beta","termid":"PBO:0063215"}


id: GO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemopoietic stem cell acquires the specialized features of a B-1 B cell. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation","termid":"GO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell differentiation","synonyms":[{"name":"B-1 B cell development","type":"related"},{"name":"B-1 B lymphocyte differentiation","type":"exact"},{"name":"B-1 B-cell differentiation","type":"exact"},{"name":"B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001923"}


id: MOD:01001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a 2-aminoisobutyric acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoisobutyric acid residue (Aib)","synonyms":[{"name":"2-amino-2-methylpropanoic acid","type":"exact"},{"name":"2-amino-2-methylpropionic acid","type":"exact"},{"name":"2-methylalanine","type":"exact"},{"name":"Aib","type":"exact"},{"name":"alpha,alpha-dimethylglycine","type":"exact"},{"name":"alpha-aminoisobutyric acid","type":"exact"},{"name":"alpha-methylalanine","type":"exact"}],"termid":"MOD:01001"}


id: PBO:0042469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 7","termid":"PBO:0042469"}


id: PR:Q09764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.11c gene.","definition_xrefs":["UniProtKB:Q09764","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.11c","synonyms":[{"name":"Spom972h-SPAC24H6.11c","type":"exact"}],"termid":"PR:Q09764"}


id: PBO:0056315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 2","termid":"PBO:0056315"}


id: GO:0001164
data:
  {"annotated_genes":["SJAG_00692","SJAG_02813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105200,107977],"is_not":false,"summary":null,"term":"GO:0001164"}]},"cv_name":"molecular_function","definition":"Binding to a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery. This site is often referred to as the CORE element. In mammalian cells, the CORE element functions in conjunction with the Upstream Control Element (UCE), while in fungi, protozoa, and plants, the CORE element functions without a UCE.","definition_xrefs":["PMID:8057832","PMID:14969726","PMID:12865296","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core promoter sequence-specific DNA binding","termid":"GO:0001046"},{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_02813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0000976","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase I core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001187"],"synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding","type":"exact"},{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity","type":"related"},{"name":"transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting","type":"related"}],"termid":"GO:0001164","terms_by_termid":{"GO:0001164":null}}


id: GO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen samples carried out by M cells in the mucosal-associated lymphoid tissue.","definition_xrefs":["GOC:jal","PMID:11896763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen sampling in mucosal-associated lymphoid tissue","termid":"GO:0002404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling by M cells in MALT","type":"exact"}],"termid":"GO:0002406"}


id: PBO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 3","termid":"PBO:0071697"}


id: PBO:0074536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA I","termid":"PBO:0074536"}


id: PATO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete profound intensity (obsolete PATO:0002529)","termid":"PATO:0002529"}


id: GO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hypertrophy","termid":"GO:0014743"}


id: GO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Leu-Leu bond in synthetic tetradecapeptide renin substrate, producing angiotensin I, but not active on natural angiotensinogen. Also hydrolyzes BZ-Arg-para-nitroanilide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-renin activity (obsolete GO:0004253)","synonyms":[{"name":"gamma-renin activity","type":"exact"}],"termid":"GO:0004253"}


id: GO:0008968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sedoheptulose-7-phosphate = D-alpha,beta-D-heptose 7-phosphate.","definition_xrefs":["PMID:8631969","PMID:11279237","MetaCyc:RXN0-4301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"D-sedoheptulose 7-phosphate isomerase activity","secondary_identifiers":["RHEA:27489"],"synonyms":[{"name":"phosphoheptose isomerase activity","type":"exact"}],"termid":"GO:0008968"}


id: PBO:0082655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the BUB2-dependent spindle checkpoint pathway; interacts with Bfa1p and functions upstream of Bub2p and Bfa1p","termid":"PBO:0082655"}


id: PBO:0041363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 17","termid":"PBO:0041363"}


id: GO:0005915
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"zonula adherens","secondary_identifiers":["NIF_Subcellular:sao1400623473"],"synonyms":[{"name":"adhesion belt","type":"exact"},{"name":"belt desmosome","type":"exact"},{"name":"intermediate junction","type":"exact"},{"name":"zonula adhaerens","type":"exact"}],"termid":"GO:0005915"}


id: PBO:0002782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex histone acetyltransferase catalytic subunit Gcn5","termid":"PBO:0002782"}


id: FYPO:0005063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K4me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005063"}


id: PBO:0049671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 3","termid":"PBO:0049671"}


id: FYPO:0005268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to methyl methanesulfonate (MMS) is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to MMS. The most common abnormality is for the cell cycle to progress as in the absence of MMS.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following methyl methanesulfonate exposure","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to MMS","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005268"}


id: GO:0090199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"}


id: GO:0008840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-aspartate-4-semialdehyde = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H2O.","definition_xrefs":["PMID:8993314","RHEA:34171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate synthase activity","secondary_identifiers":["MetaCyc:DIHYDRODIPICSYN-RXN","KEGG_REACTION:R02292","EC:4.3.3.7"],"synonyms":[{"name":"DHDPS activity","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase (adding pyruvate and cyclizing)","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase [adding pyruvate and cyclizing; (S)-2,3-dihydropyridine-2,6-dicarboxylate-forming]","type":"related"},{"name":"dihydrodipicolinate synthase activity","type":"exact"},{"name":"dihydrodipicolinate synthetase activity","type":"related"},{"name":"dihydrodipicolinic acid synthase activity","type":"related"}],"termid":"GO:0008840"}


id: GO:0100057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates phenotypic switching.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100057)","termid":"GO:0100057"}


id: PBO:0062217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AN member 1","termid":"PBO:0062217"}


id: PBO:0070552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 18","termid":"PBO:0070552"}


id: GO:0070002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism involving a glutamate/glutamine catalytic dyad.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"glutamic-type peptidase activity","termid":"GO:0070002"}


id: PBO:0075601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPO11 initiator of meiotic double stranded breaks","termid":"PBO:0075601"}


id: PBO:0039809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF4 antisense RNA 1","termid":"PBO:0039809"}


id: GO:0007571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as the cell progresses toward the end of its lifespan and cause changes cellular metabolism, resulting in a decline in cell function; for example, one aspect of general metabolic decline is a decrease in the efficiency of protein synthesis.","definition_xrefs":["PMID:9891807","GOC:jh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent general metabolic decline (obsolete GO:0007571)","synonyms":[{"name":"age-dependent decreased translational activity","type":"narrow"},{"name":"age-dependent increased protein content","type":"narrow"},{"name":"age-dependent yeast cell size increase","type":"related"},{"name":"nucleolar size increase","type":"narrow"}],"termid":"GO:0007571"}


id: GO:1902048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving neosartoricin.","definition_xrefs":["GOC:TermGenie","PMID:23368997","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"neosartoricin metabolic process","synonyms":[{"name":"neosartoricin metabolism","type":"exact"}],"termid":"GO:1902048"}


id: SO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_methylation_site","synonyms":[{"name":"H3K9 methylation site","type":"exact"}],"termid":"SO:0001736"}


id: PBO:0047685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 2","termid":"PBO:0047685"}


id: GO:0002542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates Factor XII (Hageman factor). Factor XII is a protein synthesized by the liver that circulates in an inactive form until it encounters collagen or basement membrane or activated platelets (as occurs at the site of endothelial injury). Factor XII then undergoes a conformational change (becoming factor XIIa), exposing an active serine center that can subsequently cleave protein substrates and activate a variety of mediator systems. Factor XII is a participant in the clotting cascade as well as the kinin cascade.","definition_xrefs":["GOC:jal","ISBN:0721601871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"part_of","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"},{"relation_name":"positively_regulates","term_name":"activation of plasma proteins involved in acute inflammatory response","termid":"GO:0002541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"Factor XII activation","synonyms":[{"name":"Hageman factor activation","type":"exact"}],"termid":"GO:0002542"}


id: GO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamine + H2O = protein L-glutamate + NH3.","definition_xrefs":["EC:3.5.1.44","MetaCyc:CHEBDEAMID-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"protein-glutamine glutaminase activity","secondary_identifiers":["RHEA:16441"],"synonyms":[{"name":"destabilase activity","type":"related"},{"name":"glutaminyl-peptide glutaminase activity","type":"related"},{"name":"glutaminylpeptide glutaminase activity","type":"related"},{"name":"peptidoglutaminase II activity","type":"related"},{"name":"peptidylglutaminase II","type":"related"},{"name":"protein-L-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050568"}


id: PBO:0086867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein; PTK1 has a paralog, PTK2, that arose from the whole genome duplication","termid":"PBO:0086867"}


id: PBO:0025418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex1","termid":"PBO:0025418"}


id: FYPO:0007234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the central core of the centromeric region of a chromosome is normal (i.e. indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to centromere central core","synonyms":[{"name":"normal protein localisation to centromere central core","type":"exact"},{"name":"normal protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007234"}


id: GO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell morphogenesis","termid":"GO:0001886"}


id: GO:0042432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole metabolic process","termid":"GO:0042431"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole biosynthetic process","synonyms":[{"name":"indole anabolism","type":"exact"},{"name":"indole biosynthesis","type":"exact"},{"name":"indole formation","type":"exact"},{"name":"indole synthesis","type":"exact"}],"termid":"GO:0042432"}


id: PBO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolus and neural progenitor protein","termid":"PBO:0060885"}


id: GO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of an anatomical structure of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host anatomical structure","synonyms":[{"name":"cytopathogenic effect","type":"related"},{"name":"disruption by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host structure","type":"related"}],"termid":"GO:0052111"}


id: GO:0000372
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94156],"is_not":false,"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"The splicing of Group I introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group I introns and involved in determining the locations of the splice sites (there do not appear to be consensus splice site sequences) as well as having a role in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions, generally with exogenous guanosine as the initiating nucleophile. The intron is excised as a linear piece (though it may subsequently circularize).","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","termid":"GO:0000376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Group I intron splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000372","terms_by_termid":{"GO:0000372":null}}


id: GO:0008538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["GOC:rn","PMID:10428771"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome activator activity (obsolete GO:0008538)","synonyms":[{"name":"PA28","type":"narrow"},{"name":"proteasome activator activity","type":"exact"}],"termid":"GO:0008538"}


id: PBO:0088769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator complex subunit Bur6","termid":"PBO:0088769"}


id: PBO:0089177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase, conserved in fungi, bacteria, plants, protazoa","termid":"PBO:0089177"}


id: GO:0010338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a leaf. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf formation","termid":"GO:0010338"}


id: GO:0008779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + O-(2-acyl-sn-glycero-3-phospho)ethanolamine = [acyl-carrier protein] + O-(1-beta-acyl-2-acyl-sn-glycero-3-phospho)ethanolamine.","definition_xrefs":["EC:2.3.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity","secondary_identifiers":["MetaCyc:ACYLGPEACYLTRANS-RXN","RHEA:10304"],"synonyms":[{"name":"acyl-ACP-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-[acyl-carrier protein]-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-acyl-carrier-protein-phospholipid O-acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:O-(2-acyl-sn-glycero-3-phospho)-ethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0008779"}


id: PBO:0072994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCML2 pseudogene 1","termid":"PBO:0072994"}


id: PBO:0070913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 21","termid":"PBO:0070913"}


id: FYPO:0001622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuolar threonine level","synonyms":[{"name":"normal level of threonine in vacuole","type":"exact"},{"name":"normal vacuolar L-threonine level","type":"exact"},{"name":"normal vacuolar threonine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar threonine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001622"}


id: GO:1990354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a SUMO protein bound to a SUMO activating enzyme complex. Activation by the E1 complex and linkage to the E2 enzyme UBE2I is required for the formation of covalent bonds between SUMO and its ultimate target proteins.","definition_xrefs":["PMID:15660128","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"activated SUMO-E1 ligase complex","synonyms":[{"name":"SUMO-SAE1/2 complex","type":"narrow"}],"termid":"GO:1990354"}


id: PBO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 2B","termid":"PBO:0044624"}


id: PBO:0075756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase","termid":"PBO:0075756"}


id: PBO:0063243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 8","termid":"PBO:0063243"}


id: SO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified proline amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_proline","secondary_identifiers":["MOD:00915"],"synonyms":[{"name":"ModPro","type":"exact"},{"name":"modified L proline","type":"exact"},{"name":"modified L-proline ","type":"exact"}],"termid":"SO:0001404"}


id: PBO:0078929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-1","termid":"PBO:0078929"}


id: GO:0072662
data:
  {"annotated_genes":["SJAG_00702","SJAG_03324","SJAG_01854","SJAG_04763","SJAG_03781","SJAG_00891","SJAG_00326","SJAG_05315","SJAG_01165","SJAG_02997","SJAG_02693","SJAG_02619","SJAG_02034","SJAG_03440","SJAG_02797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86323,106091,107429,62828,86526,92542,94302,101273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[99149,107893,93030],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[113328,97356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[86518,107430,91502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[99150,86519,86527,91503,93031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a peroxisome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04763":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007031","GO:0051179"],"is_obsolete":false,"name":"protein localization to peroxisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to peroxisome","type":"exact"}],"termid":"GO:0072662","terms_by_termid":{"GO:0006625":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0011117
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE domain recruiting","termid":"PBO:0011117"}


id: PBO:0074827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 23","termid":"PBO:0074827"}


id: PBO:0075181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 11","termid":"PBO:0075181"}


id: PBO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_leptomycin_B","termid":"PBO:0031458"}


id: PBO:0032742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase Dtd1 (predicted)","termid":"PBO:0032742"}


id: PBO:0071433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 39","termid":"PBO:0071433"}


id: PBO:0056808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD4A antisense RNA 1","termid":"PBO:0056808"}


id: GO:1904456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential.","definition_xrefs":["GOC:TermGenie","PMID:25126967","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"negative regulation of transmission of nerve impulse","termid":"GO:0051970"},{"relation_name":"is_a","term_name":"regulation of neuronal action potential","termid":"GO:0098908"},{"relation_name":"negatively_regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuronal action potential","synonyms":[{"name":"down regulation of generation of action potential","type":"related"},{"name":"down regulation of neuronal action potential","type":"exact"},{"name":"down-regulation of generation of action potential","type":"related"},{"name":"down-regulation of neuronal action potential","type":"exact"},{"name":"downregulation of generation of action potential","type":"related"},{"name":"downregulation of neuronal action potential","type":"exact"},{"name":"inhibition of generation of action potential","type":"related"},{"name":"inhibition of neuronal action potential","type":"narrow"},{"name":"negative regulation of generation of action potential","type":"related"}],"termid":"GO:1904456"}


id: PBO:0074616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 17A","termid":"PBO:0074616"}


id: GO:2000841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of dehydroepiandrosterone secretion","termid":"GO:2000840"},{"relation_name":"negatively_regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"negative regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"negative regulation of DHEA secretion","type":"exact"},{"name":"negative regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000841"}


id: RO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts and ends during y if and only if the start of x is part of y and the end of x is part of y. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y)","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_starts_during","termid":"RO:0002488"},{"relation_name":"is_a","term_name":"existence_ends_during","termid":"RO:0002492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_and_ends_during","termid":"RO:0002491"}


id: GO:0043835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: uracil + H2O + acceptor = barbiturate + reduced acceptor; and thymine + H2O + acceptor = 5-methylbarbiturate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/thymine dehydrogenase activity (obsolete GO:0043835)","secondary_identifiers":["EC:1.17.99.4"],"synonyms":[{"name":"uracil oxidase activity","type":"related"},{"name":"uracil-thymine oxidase activity","type":"related"},{"name":"uracil/thymine dehydrogenase activity","type":"exact"},{"name":"uracil:acceptor oxidoreductase activity","type":"narrow"}],"termid":"GO:0043835"}


id: PBO:0048624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric inhibitory polypeptide","termid":"PBO:0048624"}


id: PBO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Byr3","termid":"PBO:0001441"}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: GO:1900825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during action potential","termid":"GO:0098902"},{"relation_name":"regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"}


id: PBO:0089467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex armadillo repeat subunit Gid5","termid":"PBO:0089467"}


id: GO:0033406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UCC codon-amino acid adaptor activity","synonyms":[{"name":"TCC codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033406"}


id: PBO:0083404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YBR126W-A; identified by SAGE","termid":"PBO:0083404"}


id: PBO:0065459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 5","termid":"PBO:0065459"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: GO:0099165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane of a symmetric synapse. Its major components include that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. This structure is not as thick or electron dense as the postsynaptic density found in asymmetric synapses.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse, intracellular component","termid":"GO:0099165"}


id: FYPO:0005265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lead ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to lead","synonyms":[{"name":"resistance to lead during mitotic cell cycle","type":"related"},{"name":"resistance to lead during vegetative growth","type":"exact"},{"name":"resistance to lead ions","type":"exact"},{"name":"resistant to lead","type":"exact"}],"termid":"FYPO:0005265"}


id: GO:0103009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 3-chlorotoluene + NADH + O2 = 3-chlorobenzyl alcohol + NAD + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-chlorotoluene monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-9908"],"termid":"GO:0103009"}


id: PBO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1/Prk1 family protein kinase Ppk30","termid":"PBO:0004130"}


id: GO:0140104
data:
  {"annotated_genes":["SJAG_01418","SJAG_00913","SJAG_01238","SJAG_04670","SJAG_04272","SJAG_04758","SJAG_01005","SJAG_02798","SJAG_02661","SJAG_00914","SJAG_02998","SJAG_04547","SJAG_02698","SJAG_03959","SJAG_02571","SJAG_02314","SJAG_04561","SJAG_01358","SJAG_03366","SJAG_01122","SJAG_02348","SJAG_03905","SJAG_02416","SJAG_01940","SJAG_04411","SJAG_02994","SJAG_02198","SJAG_03633","SJAG_02361","SJAG_04366","SJAG_03231","SJAG_01534","SJAG_04692","SJAG_05300","SJAG_03693","SJAG_01496","SJAG_04038","SJAG_03296","SJAG_02425","SJAG_02895","SJAG_04180","SJAG_00925","SJAG_03867","SJAG_05302","SJAG_04403","SJAG_03662","SJAG_02437","SJAG_01909","SJAG_03862","SJAG_01178","SJAG_00840","SJAG_00968","SJAG_00532","SJAG_03798","SJAG_00449","SJAG_00569","SJAG_01789","SJAG_02439","SJAG_01405","SJAG_04257","SJAG_00586","SJAG_01240","SJAG_03470","SJAG_02906","SJAG_04553","SJAG_03128","SJAG_00170","SJAG_00942","SJAG_00277","SJAG_04223","SJAG_00259","SJAG_01083","SJAG_02065","SJAG_02035"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111256],"is_not":false,"summary":null,"term":"GO:0140104"},{"annotations":[94336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"},{"annotations":[94995,96089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[84104,94310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[90686,92521,99623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[109132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[98178,89195,85140,100750,103530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[107314,109655,107313,109654,94218,104151,112941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[104828,106272,88452,99624,104823,110584,90898,103781,111121,108849,91146,113974,91525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"},{"annotations":[84940,105715,90689,98964,113975,91391,107221,86172,109656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140713"},{"annotations":[109930,96625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[89024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140132"},{"annotations":[99572,90902,106453,109395,110735,96968,84044,108296,84069,107045,107836,110170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032977"},{"annotations":[87167,92581,104515,109579,113284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[85532,89466,91838,102973,110499,99440,89523,111868,113285,98610,88000,92582,114705,99730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"},{"annotations":[114618,95067,100187,100842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140597"},{"annotations":[89197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific ion or molecule and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":74,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00277":null,"SJAG_00449":null,"SJAG_00532":null,"SJAG_00569":null,"SJAG_00586":null,"SJAG_00840":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_00968":null,"SJAG_01005":null,"SJAG_01083":null,"SJAG_01122":null,"SJAG_01178":null,"SJAG_01238":null,"SJAG_01240":null,"SJAG_01358":null,"SJAG_01405":null,"SJAG_01418":null,"SJAG_01496":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01940":null,"SJAG_02035":null,"SJAG_02065":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02361":null,"SJAG_02416":null,"SJAG_02425":null,"SJAG_02437":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02661":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02895":null,"SJAG_02906":null,"SJAG_02994":null,"SJAG_02998":null,"SJAG_03128":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_03366":null,"SJAG_03470":null,"SJAG_03633":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03798":null,"SJAG_03862":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_03959":null,"SJAG_04038":null,"SJAG_04180":null,"SJAG_04223":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04366":null,"SJAG_04403":null,"SJAG_04411":null,"SJAG_04547":null,"SJAG_04553":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular carrier activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140104","terms_by_termid":{"GO:0000036":null,"GO:0000510":null,"GO:0000511":null,"GO:0005049":null,"GO:0016531":null,"GO:0016532":null,"GO:0032977":null,"GO:0034986":null,"GO:0061608":null,"GO:0140104":null,"GO:0140132":null,"GO:0140597":null,"GO:0140663":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: PBO:0030562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_tryptophan_level","termid":"PBO:0030562"}


id: GO:1903044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a membrane raft.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:19414744","GOC:dl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to membrane raft","synonyms":[{"name":"protein localisation in membrane raft","type":"exact"},{"name":"protein localisation to membrane raft","type":"exact"},{"name":"protein localization in membrane raft","type":"exact"}],"termid":"GO:1903044"}


id: GO:0180016
data:
  {"annotated_genes":["SJAG_00177"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101772],"is_not":false,"summary":null,"term":"GO:0180016"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a SUMO ligase.","definition_xrefs":["PMID:19363481","PMID:33446573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00177":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"SUMO ligase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180016","terms_by_termid":{"GO:0180016":null}}


id: PBO:0045190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 3","termid":"PBO:0045190"}


id: PBO:0029199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0029199"}


id: PBO:0058007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3934","termid":"PBO:0058007"}


id: FYPO:0005888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased, and some of the protein is present in the nucleoplasm instead.","definition_xrefs":["PomBase:mah","PMID:27666591"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","synonyms":[{"name":"decreased protein localisation to centromeric chromatin, with protein mislocalised to nucleoplasm","type":"exact"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at centromere, with protein mislocalized to nucleoplasm","type":"exact"},{"name":"reduced protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","type":"exact"}],"termid":"FYPO:0005888"}


id: GO:0002697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immune effector process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune effector process","termid":"GO:0002697"}


id: PR:O43087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kms2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy meiotic segregation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.12","synonyms":[{"name":"Spom972h-kms2","type":"exact"}],"termid":"PR:O43087"}


id: GO:0000030
data:
  {"annotated_genes":["SJAG_03878","SJAG_03953","SJAG_04952","SJAG_01021","SJAG_00747","SJAG_04053","SJAG_01491","SJAG_04878","SJAG_00598","SJAG_01264","SJAG_02102","SJAG_03115","SJAG_00295","SJAG_02168","SJAG_01276","SJAG_04906","SJAG_04770","SJAG_02519","SJAG_03056","SJAG_04316","SJAG_00816","SJAG_05327","SJAG_06425","SJAG_03555","SJAG_03082","SJAG_02903","SJAG_03801","SJAG_00334","SJAG_00437"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83627,85651,86829,91325,93960,100984,112179],"is_not":false,"summary":null,"term":"GO:0000030"},{"annotations":[111252,114381,101098,96817,105067,100556,101997,94176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000026"},{"annotations":[98354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000033"},{"annotations":[99098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051751"},{"annotations":[108740,93959,83624,83625,100983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000009"},{"annotations":[89969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"},{"annotations":[96044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052925"},{"annotations":[87208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052926"},{"annotations":[87209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052918"},{"annotations":[101035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052917"},{"annotations":[92496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004582"},{"annotations":[97591,100139,89095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004169"},{"annotations":[98355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"},{"annotations":[112779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"},{"annotations":[83626,87303,98357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"},{"annotations":[99099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004376"},{"annotations":[91809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103064"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:cjm","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_00334":null,"SJAG_00437":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02102":null,"SJAG_02168":null,"SJAG_02519":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03115":null,"SJAG_03555":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04053":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04878":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_05327":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162797","Reactome:R-HSA-446198","Reactome:R-HSA-162830","Reactome:R-HSA-4720497"],"termid":"GO:0000030","terms_by_termid":{"GO:0000009":null,"GO:0000026":null,"GO:0000030":null,"GO:0000033":null,"GO:0004169":null,"GO:0004376":null,"GO:0004377":null,"GO:0004378":null,"GO:0004578":null,"GO:0004582":null,"GO:0033164":null,"GO:0051751":null,"GO:0052917":null,"GO:0052918":null,"GO:0052925":null,"GO:0052926":null,"GO:0103064":null}}


id: FYPO:0005296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:18045993","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci during mitotic S phase","synonyms":[{"name":"increased number of Rad22 foci during mitotic S phase","type":"exact"},{"name":"increased number of Rad52 foci during S phase of mitotic cell cycle","type":"exact"},{"name":"increased number of Rad52 foci during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005296"}


id: SO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operation that can be applied to a sequence, that results in a change.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000041 sequence_operation (obsolete SO:0000041)","synonyms":[{"name":"sequence operation","type":"exact"}],"termid":"SO:0000041"}


id: GO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vestibulocochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve formation","synonyms":[{"name":"CN VII formation","type":"related"}],"termid":"GO:0021650"}


id: GO:0071316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nicotine","termid":"GO:0035094"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nicotine","termid":"GO:0071316"}


id: PBO:0028196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-azetidine-2-carboxylic_acid","termid":"PBO:0028196"}


id: PBO:0039410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 15","termid":"PBO:0039410"}


id: PBO:0070967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 5","termid":"PBO:0070967"}


id: PR:Q10078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00803","PANTHER:PTHR22967:SF29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.13","secondary_identifiers":["UniProtKB:Q10078"],"synonyms":[{"name":"Spom972h-STK16","type":"exact"}],"termid":"PR:Q10078"}


id: GO:0099579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity, occurring in the postsynaptic membrane, involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099579"}


id: GO:0098735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force of heart muscle contraction.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:17242280","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction","termid":"GO:0098735"}


id: PBO:0054974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2388","termid":"PBO:0054974"}


id: GO:1990648
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104346],"is_not":false,"summary":null,"term":"GO:1990648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5,6-trisphosphate + H2O = 1D-myo-inositol 4,6-bisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-4,5,6-triphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990648","terms_by_termid":{"GO:1990648":null}}


id: PBO:0046547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 1","termid":"PBO:0046547"}


id: GO:0140267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, triggered by an interaction between the bilayer of a host membrane and a membrane-penetration symbiont protein. This process mediates the entry of some non-enveloped virus into host cells, and results in the release of the virus contents into the host cell cytoplasm.","definition_xrefs":["PMID:20427561","PMID:25055856","VZ:985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of host membrane","synonyms":[{"name":"viral entry via permeabilization of host membrane","type":"narrow"}],"termid":"GO:0140267"}


id: FYPO:0007700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell is inviable and an abnormally low volume, and in which the G2/M transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PMID:33683349","PMID:1706223","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"inviable small vegetative cell with premature mitotic G2/M phase transition","synonyms":[{"name":"inviable small cell with premature mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2 phase progression","type":"related"},{"name":"inviable small vegetative cell with advanced mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2 advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2/M transition advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic cell cycle advance at G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with premature cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with premature mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable small vegetative cell with premature mitotic G2/M transition","type":"exact"},{"name":"mitotic catastrophe","type":"related"}],"termid":"FYPO:0007700"}


id: PBO:0091668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm2","termid":"PBO:0091668"}


id: PBO:0005083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf7","termid":"PBO:0005083"}


id: PBO:0049112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 174","termid":"PBO:0049112"}


id: GO:0044468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in modulation of blood coagulation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044468"}


id: GO:0043861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine(out) + putrescine(in) = agmatine(in) + putrescine(out).","definition_xrefs":["GOC:jl","PMID:17028272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"putrescine transmembrane transporter activity","termid":"GO:0015489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"agmatine:putrescine antiporter activity","synonyms":[{"name":"agmatine-putrescine antiporter activity","type":"exact"},{"name":"agmatine/putrescine antiporter activity","type":"exact"}],"termid":"GO:0043861"}


id: PBO:0065357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prosaposin","termid":"PBO:0065357"}


id: PBO:0075846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 pseudogene 1","termid":"PBO:0075846"}


id: PBO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet3","termid":"PBO:0017812"}


id: PBO:0078547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 38","termid":"PBO:0078547"}


id: PR:Q9HDU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylgalactosamine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04144","PANTHER:PTHR10457:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.13","secondary_identifiers":["UniProtKB:Q9HDU2"],"synonyms":[{"name":"Spom972h-GALK2","type":"exact"},{"name":"galactose kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU2"}


id: PBO:0056767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 18","termid":"PBO:0056767"}


id: FYPO:0004426
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dephosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein dephosphorylation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"termid":"FYPO:0004426","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: GO:0004673
data:
  {"annotated_genes":["SJAG_01587","SJAG_00331","SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91332,114283,87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine.","definition_xrefs":["EC:2.7.13.3","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"protein histidine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008896","MetaCyc:2.7.13.3-RXN"],"synonyms":[{"name":"ATP:protein-L-histidine N-phosphotransferase activity","type":"related"},{"name":"histidine kinase activity","type":"exact"},{"name":"histidine protein kinase activity","type":"related"},{"name":"protein kinase (histidine)","type":"related"},{"name":"protein-histidine kinase activity","type":"exact"}],"termid":"GO:0004673","terms_by_termid":{"GO:0000155":null}}


id: PBO:0003780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine transporter Can1","termid":"PBO:0003780"}


id: PBO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-22","termid":"PBO:0051438"}


id: GO:0046006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell proliferation","synonyms":[{"name":"regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"regulation of activated T-cell proliferation","type":"exact"},{"name":"regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046006"}


id: PBO:0034195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_semi-orthology_relationship_with","termid":"PBO:0034195"}


id: PBO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 13","termid":"PBO:0070834"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PBO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Met9","termid":"PBO:0000796"}


id: PBO:0028461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_septin_ring","termid":"PBO:0028461"}


id: GO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the mammary placode forms. The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper.","definition_xrefs":["GOC:dph","PMID:16168142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"mammary gland formation","termid":"GO:0060592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary placode formation","termid":"GO:0060596"}


id: PBO:0053323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 112","termid":"PBO:0053323"}


id: GO:0072316
data:
  {"annotated_genes":["SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107352],"is_not":false,"summary":null,"term":"GO:0072316"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans in the ascus wall that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan catabolic process","termid":"GO:0030980"},{"relation_name":"is_a","term_name":"extracellular polysaccharide catabolic process involved in ascospore release from ascus","termid":"GO:0072000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan catabolic process involved in ascospore release from ascus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan breakdown involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan catabolism involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan degradation involved in ascospore release from ascus","type":"exact"}],"termid":"GO:0072316","terms_by_termid":{"GO:0072316":null}}


id: GO:0031627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which linear telomeric DNA is remodeled into duplex loops, by the invasion of a 3' single-stranded overhang into the duplex region.","definition_xrefs":["GOC:vw","PMID:10338214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"telomeric loop formation","synonyms":[{"name":"T loop biosynthesis","type":"exact"},{"name":"T loop formation","type":"exact"},{"name":"t-loop biosynthesis","type":"exact"},{"name":"t-loop formation","type":"exact"}],"termid":"GO:0031627"}


id: GO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult salivary gland boundary specification","synonyms":[{"name":"regulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045707"}


id: PBO:0048220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase 1","termid":"PBO:0048220"}


id: PBO:0044370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoglobin","termid":"PBO:0044370"}


id: PBO:0050715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 1","termid":"PBO:0050715"}


id: GO:0008803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-adenosyl) tetraphosphate + H2O = 2 ADP + 2 H+.","definition_xrefs":["EC:3.6.1.41","RHEA:24252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity","secondary_identifiers":["KEGG_REACTION:R00125","MetaCyc:3.6.1.41-RXN"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"adenosine tetraphosphate phosphodiesterase activity","type":"related"},{"name":"bis(5'-adenosyl) tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine polyphosphate hydrolase activity","type":"related"},{"name":"diadenosine tetraphosphatase (symmetrical)","type":"narrow"},{"name":"diadenosine tetraphosphate hydrolase activity","type":"related"},{"name":"diadenosinetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphate (symmetrical)","type":"related"},{"name":"symmetrical diadenosine tetraphosphate hydrolase activity","type":"related"}],"termid":"GO:0008803"}


id: PBO:0041100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSCL2 lipid droplet biogenesis associated, seipin","termid":"PBO:0041100"}


id: GO:0009421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteinaceous structure at the distal tip of the bacterial-type flagellar filament.","definition_xrefs":["GOC:cilia","PMID:10572114","PMID:12624192","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum filament","termid":"GO:0009420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum filament cap","synonyms":[{"name":"flagellar filament cap","type":"exact"},{"name":"flagellin-based flagellum filament cap","type":"exact"}],"termid":"GO:0009421"}


id: PBO:0068440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 14, pseudogene","termid":"PBO:0068440"}


id: GO:0102359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7,8-dihydroxycoumarin = UDP + 4-O- beta -D-glucosyl-daphnetin + H+.","definition_xrefs":["EC:2.4.1.126","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"daphnetin 4-O-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13450"],"termid":"GO:0102359"}


id: PBO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 31","termid":"PBO:0070660"}


id: FYPO:0001804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to caffeine. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell lysis during cellular response to caffeine (obsolete FYPO:0001804)","synonyms":[{"name":"cell lysis during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to caffeine","type":"exact"},{"name":"inviable, lysed cell during cellular response to caffeine","type":"exact"},{"name":"lysed cell in response to caffeine","type":"exact"}],"termid":"FYPO:0001804"}


id: PBO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein, Erd1 homolog, required for glycosylation and ER retention Erd1/Gmn2","termid":"PBO:0090647"}


id: PBO:0029855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_outer_repeat","termid":"PBO:0029855"}


id: FYPO:0007168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the attachment of microtubules to the cell cortex does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished microtubule attachment to cell cortex","synonyms":[{"name":"abolished microtubule anchoring at cell cortex","type":"exact"},{"name":"abolished microtubule cortical anchor activity","type":"exact"}],"termid":"FYPO:0007168"}


id: PBO:0071018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 20","termid":"PBO:0071018"}


id: PBO:0084549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus","termid":"PBO:0084549"}


id: PBO:0075774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 2","termid":"PBO:0075774"}


id: GO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 deacetylation (obsolete GO:0070932)","termid":"GO:0070932"}


id: GO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that solubilizes fibrin in the bloodstream of a multicellular organism, chiefly by the proteolytic action of plasmin.","definition_xrefs":["GOC:jl","PMID:15842654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibrinolysis","secondary_identifiers":["Wikipedia:Fibrinolysis"],"termid":"GO:0042730"}


id: PBO:0005433
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as Med9","termid":"PBO:0005433"}


id: PBO:0063994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 28","termid":"PBO:0063994"}


id: GO:0062091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the chloroplast inner membrane and facing the stroma that is associated with the chloroplast inner membrane translocase complex and provides the ATPase motor activity to drive import of proteins into the chloroplast stroma.","definition_xrefs":["PMID:30309901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ycf2/FtsHi complex","synonyms":[{"name":"TIC complex associated chloroplast protein import motor","type":"exact"}],"termid":"GO:0062091"}


id: PBO:0071209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 50","termid":"PBO:0071209"}


id: GO:0016348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an imaginal disc-derived leg joint are generated and organized. The leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived leg segmentation","termid":"GO:0036011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg joint morphogenesis","termid":"GO:0016348"}


id: PBO:0080535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASHC5 antisense RNA 1","termid":"PBO:0080535"}


id: PBO:0082205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the second alpha-1,2-linked mannose of the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082205"}


id: MOD:01588
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-cholinephosphoryl-L-serine.","definition_xrefs":["RESID:AA0498","PubMed:16949362","PubMed:16825186","PubMed:15249686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-cholinephosphoryl-L-serine","synonyms":[{"name":"2-[([(2S)-2-amino-2-carboxyethoxy][hydroxy]phosphoryl)oxy]-N,N,N-trimethylethanaminium","type":"exact"},{"name":"2-[([(2S)-2-azanyl-2-carboxyethoxy][hydroxy]phosphoryl)oxy]-N,N,N-trimethylethanazanium","type":"exact"},{"name":"MOD_RES O-(2-cholinephosphoryl)serine","type":"exact"},{"name":"O-cholinephosphoryl-L-serine","type":"exact"},{"name":"O3-[(2-[trimethylammonio]ethyl)phosphoryl]-L-serine","type":"exact"},{"name":"O3-phosphocholine-L-serine","type":"exact"},{"name":"serine choline phosphate","type":"exact"},{"name":"serine choline phosphodiester","type":"exact"}],"termid":"MOD:01588"}


id: GO:1902611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:rjd","PMID:24006265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to N-phenylthiourea","termid":"GO:1902610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-phenylthiourea","termid":"GO:1902611"}


id: PBO:0082386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 6 subunit of the 20S proteasome","termid":"PBO:0082386"}


id: PBO:0041297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4A","termid":"PBO:0041297"}


id: PBO:0073262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 6","termid":"PBO:0073262"}


id: PBO:0074562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 16","termid":"PBO:0074562"}


id: PBO:0065723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP2 small subunit processome component","termid":"PBO:0065723"}


id: PBO:0029930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribose_1-diphosphate_binding","termid":"PBO:0029930"}


id: PBO:0048685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 4","termid":"PBO:0048685"}


id: GO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the epistomal sclerite are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"epistomal sclerite development","termid":"GO:0048724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epistomal sclerite morphogenesis","termid":"GO:0048719"}


id: PBO:0075458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 8","termid":"PBO:0075458"}


id: PBO:0076931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor EB","termid":"PBO:0076931"}


id: SO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulon defined by considering the units of expression regulated by a specified set of regulatory gene products.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulon","termid":"SO:1001284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_regulon","synonyms":[{"name":"simple regulon","type":"exact"}],"termid":"SO:0002303"}


id: GO:0061640
data:
  {"annotated_genes":["SJAG_00663","SJAG_01894","SJAG_03581","SJAG_03887","SJAG_00442","SJAG_05290","SJAG_04887","SJAG_04776","SJAG_01143","SJAG_04703","SJAG_00082","SJAG_02431","SJAG_01805","SJAG_01188","SJAG_00700","SJAG_05179","SJAG_01456","SJAG_04666","SJAG_00256","SJAG_04621","SJAG_00845","SJAG_00938","SJAG_03088","SJAG_01665","SJAG_01114","SJAG_04982","SJAG_01769","SJAG_04470","SJAG_04498","SJAG_03596","SJAG_03692","SJAG_01863","SJAG_01732","SJAG_03342","SJAG_05285","SJAG_04358","SJAG_03045","SJAG_04551","SJAG_04001","SJAG_03703","SJAG_01277","SJAG_02392","SJAG_02215","SJAG_04077","SJAG_00279","SJAG_02831","SJAG_02864","SJAG_01453","SJAG_03374","SJAG_03011","SJAG_02657","SJAG_03123","SJAG_03564","SJAG_03048","SJAG_03631","SJAG_02380","SJAG_02700","SJAG_03025","SJAG_00807","SJAG_02838","SJAG_01215","SJAG_01889","SJAG_02222","SJAG_03936","SJAG_04690","SJAG_01787","SJAG_00268","SJAG_03704","SJAG_04468","SJAG_02916","SJAG_02592","SJAG_03688","SJAG_04412","SJAG_03915","SJAG_04781","SJAG_02807","SJAG_03309","SJAG_04930","SJAG_04375","SJAG_00514","SJAG_03379","SJAG_01837","SJAG_03264","SJAG_00228","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90575,102047,112011],"is_not":false,"summary":null,"term":"GO:0061640"},{"annotations":[106844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000915"},{"annotations":[104180,94358,94102,85432],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[106845,101179],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044837"},{"annotations":[87368,95815],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061796"},{"annotations":[91359,98616,114645,97314,93719,88395,84380,107912,93795,94103,108348,113065,114468,94958,113891,115517,88607,88653,98479,93993],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903475"},{"annotations":[94104],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[96984,91360,93720,94105,113892,98480,108349,96752],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[93994,108807,87369,95343,99317,104182,96167,93721,102238,112225,108350,114973,99977,93969,94361,113893,78671,91361,97013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000281"},{"annotations":[92391,115338,106809,104897,84394],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902408"},{"annotations":[103086,104659,102141,100701,98694,109124,96985,95344,102157],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140278"},{"annotations":[98424],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[99758],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[98199,98425],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902413"},{"annotations":[98429],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[90483,86096],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[83652,90652,90484,106568,109407],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[89874,86097],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903490"},{"annotations":[91928,115339,99761,86861,106811],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[89875,103088,113904,101212,111504,102417,109408,85343,85968,88487],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[88488,83653,90487],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[110423,102142],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[114646,88396,106846],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[89881,90449,115100],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[109410,114696,113537,83655,105257,112720,85914,111505,87912,86102,99550],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[97437,83975,107414],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[113905],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cytokinesis that involves the function of a set of proteins that are part of the microfilament or microtubule cytoskeleton.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00256":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00442":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_01889":null,"SJAG_01894":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02657":null,"SJAG_02700":null,"SJAG_02807":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_02916":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03123":null,"SJAG_03264":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03631":null,"SJAG_03688":null,"SJAG_03692":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03915":null,"SJAG_03936":null,"SJAG_04001":null,"SJAG_04077":null,"SJAG_04358":null,"SJAG_04375":null,"SJAG_04412":null,"SJAG_04468":null,"SJAG_04470":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null,"SJAG_05179":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cytoskeleton-dependent cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:0061640","terms_by_termid":{"GO:0000281":null,"GO:0000915":null,"GO:0031671":null,"GO:0044837":null,"GO:0061640":null,"GO:0061796":null,"GO:0071520":null,"GO:0120306":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1904498":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: FYPO:0002583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature transfer RNA (tRNA) measured in a cell is lower than normal. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature tRNA level during vegetative growth","termid":"FYPO:0002579"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased mature tRNA level during vegetative growth","synonyms":[{"name":"decreased mature tRNA accumulation during vegetative growth","type":"related"},{"name":"decreased mature tRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature tRNA transcript level during vegetative growth","type":"exact"},{"name":"decreased mature transfer RNA level during vegetative growth","type":"exact"},{"name":"decreased tRNA level during vegetative growth","type":"broad"},{"name":"reduced mature tRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0002583"}


id: GO:0045616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of keratinocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"regulates","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte differentiation","termid":"GO:0045616"}


id: PBO:0050476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A4","termid":"PBO:0050476"}


id: GO:0097414
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion, 5 to 15 micrometers in diameter, with a dense core surrounded by a halo of 10 to 20 nm wide radially oriented alpha-synuclein fibrils.","definition_xrefs":["NIF_Subcellular:sao4749542545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"classical Lewy body","synonyms":[{"name":"brainstem Lewy body","type":"related"}],"termid":"GO:0097414"}


id: PBO:0074178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 1","termid":"PBO:0074178"}


id: GO:2000558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunoglobulin production in mucosal tissue.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production in mucosal tissue","termid":"GO:2000557"},{"relation_name":"positively_regulates","term_name":"immunoglobulin production in mucosal tissue","termid":"GO:0002426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of immunoglobulin production in mucosal tissue","synonyms":[{"name":"positive regulation of antibody production in mucosal tissue","type":"exact"}],"termid":"GO:2000558"}


id: GO:0043682
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103902],"is_not":false,"summary":null,"term":"GO:0043682"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out).","definition_xrefs":["RHEA:10376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type divalent copper transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-936802","Reactome:R-HSA-936895","Reactome:R-HSA-6803545","EC:7.2.2.9","GO:0004008","MetaCyc:TRANS-RXN-178","Reactome:R-HSA-3697838"],"synonyms":[{"name":"Cu(2+)-exporting ATPase activity","type":"related"},{"name":"Cu2+-exporting ATPase activity","type":"related"},{"name":"copper exporting ATPase activity","type":"broad"},{"name":"copper transmembrane transporter activity, phosphorylative mechanism","type":"broad"},{"name":"copper-exporting ATPase activity","type":"narrow"},{"name":"copper-translocating P-type ATPase activity","type":"broad"},{"name":"copper-transporting ATPase activity","type":"broad"}],"termid":"GO:0043682","terms_by_termid":{"GO:0043682":null}}


id: FYPO:0004945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of nigericin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to nigericin","synonyms":[{"name":"resistance to nigericin during mitotic cell cycle","type":"related"},{"name":"resistance to nigericin during vegetative growth","type":"exact"},{"name":"resistant to nigericin","type":"exact"}],"termid":"FYPO:0004945"}


id: FYPO:0004226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"},{"relation_name":"is_a","term_name":"abnormal nucleosome binding","termid":"FYPO:0004225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abolished nucleosome binding","synonyms":[{"name":"nucleosome binding abolished","type":"exact"}],"termid":"FYPO:0004226"}


id: GO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond by a metallopeptidase mechanism to release a C-terminal amino acid.","definition_xrefs":["GOC:mah","EC:3.4.17.16"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X metallocarboxypeptidase activity (obsolete GO:0031368)","synonyms":[{"name":"Pro-X metallocarboxypeptidase activity","type":"exact"},{"name":"carboxypeptidase P activity","type":"narrow"},{"name":"membrane Pro-X carboxypeptidase activity","type":"narrow"},{"name":"membrane Pro-Xaa carboxypeptidase","type":"narrow"},{"name":"microsomal carboxypeptidase activity","type":"narrow"}],"termid":"GO:0031368"}


id: MOD:01031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylbenzyl","synonyms":[{"name":"diMeBzl","type":"exact"}],"termid":"MOD:01031"}


id: PBO:0111935
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family","termid":"PBO:0111935"}


id: PBO:0087631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the DSC ubiquitin ligase complex; protein of unknown function that localizes to the ER and vacuole lumen; overexpression affects endocytic protein trafficking; ortholog of fission yeast dsc3","termid":"PBO:0087631"}


id: GO:1901131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving kanamycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kanamycin metabolic process","synonyms":[{"name":"kanamycin metabolism","type":"exact"}],"termid":"GO:1901131"}


id: PBO:0045507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DST antisense RNA 1","termid":"PBO:0045507"}


id: MOD:00871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with (2)H5-phenyl isocyanate.","definition_xrefs":["Unimod:412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenyl isocyanate derivatized residue","termid":"MOD:00870"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H5-phenyl isocyanate derivatized residue","synonyms":[{"name":"Phenylisocyanate:2H(5)","type":"related"},{"name":"d5-phenyl isocyanate","type":"related"}],"termid":"MOD:00871"}


id: MOD:01095
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because not an amino acid modification.","definition_xrefs":["DeltaMass:240"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01095 Matrix alpha cyano MH+ (obsolete MOD:01095)","termid":"MOD:01095"}


id: PBO:0089256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap14","termid":"PBO:0089256"}


id: PBO:0062287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 4","termid":"PBO:0062287"}


id: GO:0016844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = secologanin + tryptamine.","definition_xrefs":["EC:4.3.3.2","RHEA:15013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"strictosidine synthase activity","secondary_identifiers":["KEGG_REACTION:R03738","MetaCyc:STRICTOSIDINE-SYNTHASE-RXN"],"synonyms":[{"name":"STR activity","type":"related"},{"name":"3-alpha(S)-strictosidine tryptamine-lyase (secologanin-forming)","type":"related"},{"name":"3-alpha(S)-strictosidine tryptamine-lyase activity","type":"related"},{"name":"strictosidine synthetase activity","type":"related"}],"termid":"GO:0016844"}


id: PBO:0025449
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine transcarbamylase deficiency","termid":"PBO:0025449"}


id: GO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the force with which blood travels through the circulatory system that contributes to the acute phase response. The acute phase response occurs during the early phases of an infection and is marked by changes in the production of plasma proteins such as C-reactive protein.","definition_xrefs":["GOC:jal","ISBN:081533642X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"part_of","term_name":"acute-phase response","termid":"GO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure involved in acute-phase response","synonyms":[{"name":"blood pressure regulation during acute phase response","type":"related"},{"name":"regulation of systemic arterial blood pressure during acute phase response","type":"related"}],"termid":"GO:0002530"}


id: PBO:0088784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA translocase Rdh54","termid":"PBO:0088784"}


id: FYPO:0006324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of the septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal septin ring morphology","synonyms":[{"name":"normal medial cortex septin ring morphology","type":"exact"},{"name":"normal septin ring morphology during mitotic cell cycle","type":"related"},{"name":"normal septin ring morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0006324"}


id: PBO:0062893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L divergent transcript","termid":"PBO:0062893"}


id: PBO:0014280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm12","termid":"PBO:0014280"}


id: PBO:0076185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 1","termid":"PBO:0076185"}


id: PBO:0016953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C19orf60 homolog","termid":"PBO:0016953"}


id: PBO:0043830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 2","termid":"PBO:0043830"}


id: PBO:0073277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 11","termid":"PBO:0073277"}


id: PR:Q9UTM1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C144.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.01","synonyms":[{"name":"Spom972h-SPAC144.01","type":"exact"}],"termid":"PR:Q9UTM1"}


id: PBO:0058375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4747","termid":"PBO:0058375"}


id: PR:Q9UUC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUC9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.11c","synonyms":[{"name":"Spom972h-mdm34","type":"exact"}],"termid":"PR:Q9UUC9"}


id: PBO:0057696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-1","termid":"PBO:0057696"}


id: PBO:0109278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3113","termid":"PBO:0109278"}


id: PR:000050220
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been ubiquitinated on Lys-15. Example: UniProtKB:P10651, 2-136, Lys-15, MOD:01148.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:31468675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Ubiq:(K14)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"H3K14ub","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K14-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"hht3/InitMet-/Ubiq:(K15)","type":"exact"},{"name":"hht3/Ubiq:(K14)","type":"exact"}],"termid":"PR:000050220"}


id: PBO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 23","termid":"PBO:0050206"}


id: FYPO:0000858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal nucleosome positioning in heterochromatin","synonyms":[{"name":"normal nucleosome occupancy in heterochromatin","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000858"}


id: GO:0160107
data:
  {"annotated_genes":["SJAG_02637","SJAG_02386"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97021,108193],"is_not":false,"summary":null,"term":"GO:0160107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(58) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(58) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003824","GO:0003674","GO:0016741","GO:0140101"],"is_obsolete":false,"name":"tRNA (adenine(58)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787525","Reactome:R-HSA-6783492","RHEA:43152"],"synonyms":[{"name":"tRNA (adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (m(1)A(58)) methyltransferase","type":"exact"},{"name":"tRNA m(1)A(58) methyltransferase","type":"exact"}],"termid":"GO:0160107","terms_by_termid":{"GO:0160107":null}}


id: PBO:0067923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 225","termid":"PBO:0067923"}


id: GO:1905780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GO_REF:0000058","GOC:kmv","PMID:17401362","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905780"}


id: GO:0045753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetate catabolic process","synonyms":[{"name":"down regulation of acetate catabolic process","type":"exact"},{"name":"down-regulation of acetate catabolic process","type":"exact"},{"name":"downregulation of acetate catabolic process","type":"exact"},{"name":"inhibition of acetate catabolic process","type":"narrow"},{"name":"negative regulation of acetate breakdown","type":"exact"},{"name":"negative regulation of acetate catabolism","type":"exact"},{"name":"negative regulation of acetate degradation","type":"exact"}],"termid":"GO:0045753"}


id: GO:1900534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"palmitic acid metabolic process","termid":"GO:1900533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"palmitic acid catabolic process","termid":"GO:1900534"}


id: PBO:0059591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 3","termid":"PBO:0059591"}


id: PBO:0082927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aldehyde dehydrogenase; involved in beta-alanine synthesis; uses NAD+ as the preferred coenzyme; very similar to Ald2p; expression is induced by stress and repressed by glucose","termid":"PBO:0082927"}


id: PBO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA transporter (predicted)","termid":"PBO:0003709"}


id: SO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region that promotes or induces the process of recombination.","definition_xrefs":["SGD:se","PMID:8861911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_regulatory_region","termid":"SO:0001681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_enhancer","synonyms":[{"name":"recombination enhancer","type":"exact"}],"termid":"SO:0002059"}


id: GO:0046413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organomercury compounds, any organic compound containing a mercury atom.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete obsolete organomercury catabolic process (obsolete GO:0046413)","synonyms":[{"name":"organomercury breakdown","type":"exact"},{"name":"organomercury catabolism","type":"exact"},{"name":"organomercury degradation","type":"exact"}],"termid":"GO:0046413"}


id: PBO:0004378
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.3.1","termid":"PBO:0004378"}


id: PBO:0031701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_export","termid":"PBO:0031701"}


id: PBO:0073905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 3","termid":"PBO:0073905"}


id: FYPO:0006251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is decreased. All tRNAs aminoacylation may be decreased, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["GO:0006418","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA aminoacylation","termid":"FYPO:0006250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"decreased tRNA aminoacylation","synonyms":[{"name":"decreased tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"decreased tRNA aminoacylation for protein translation","type":"exact"},{"name":"decreased tRNA charging","type":"narrow"},{"name":"reduced tRNA aminoacylation","type":"exact"}],"termid":"FYPO:0006251"}


id: GO:0098768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The meiotic cell cycle phase in eukaryotes between meiotic prophase I and meiotic metaphase I. During meiotic prometaphase I, the nuclear envelope breaks down and one kinetochore forms per chromosome. Chromosomes attach to spindle microtubules and begin to move towards the metaphase plate.","definition_xrefs":["PMID:16012859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051327"}],"interesting_parent_ids":["GO:0051327","GO:0008150"],"is_obsolete":false,"name":"meiotic prometaphase I","termid":"GO:0098768"}


id: PBO:0058702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6830","termid":"PBO:0058702"}


id: PBO:0075709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2C","termid":"PBO:0075709"}


id: FYPO:0001238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing staurosporine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on staurosporine","synonyms":[{"name":"normal cell population growth in presence of staurosporine","type":"exact"},{"name":"normal cell population growth on staurosporine","type":"exact"},{"name":"normal cellular response to staurosporine","type":"related"},{"name":"normal vegetative cell population growth on staurosporine","type":"exact"}],"termid":"FYPO:0001238"}


id: PBO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jrk helix-turn-helix protein","termid":"PBO:0052031"}


id: PBO:0082450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-24(28) sterol reductase; catalyzes the final step in ergosterol biosynthesis; mutants are viable, but lack ergosterol","termid":"PBO:0082450"}


id: PBO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gall bladder cancer associated suppressor of pyruvate carboxylase lncRNA","termid":"PBO:0048450"}


id: PBO:0052500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 12","termid":"PBO:0052500"}


id: PBO:0109375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8","termid":"PBO:0109375"}


id: FYPO:0003352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which DNA double-strand break formation occurs to a lower extent than normal during gene conversion at the mating-type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased mating type switching","termid":"FYPO:0000470"},{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA double-strand break formation at mating-type locus","synonyms":[{"name":"decreased DNA double-strand break formation at mating-type locus during gene conversion","type":"exact"},{"name":"decreased DNA double-strand break formation at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased DNA double-strand break formation at mating-type locus during vegetative growth","type":"exact"},{"name":"decreased DNA double-strand break formation during gene conversion at mating-type locus","type":"exact"},{"name":"decreased DSB formation at mat1","type":"exact"},{"name":"decreased DSB formation at mating-type locus","type":"exact"},{"name":"decreased DSB formation proximal to mat1","type":"exact"},{"name":"decreased gene conversion at mating-type locus, DNA double-strand break formation","type":"exact"},{"name":"reduced DNA double-strand break formation at mating-type locus","type":"exact"}],"termid":"FYPO:0003352"}


id: PR:000044734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the cdc12 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 12 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"Spom-cdc12","type":"exact"}],"termid":"PR:000044734"}


id: PATO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subulate","synonyms":[{"name":"awl-shaped","type":"exact"},{"name":"needle-like","type":"exact"}],"termid":"PATO:0001954"}


id: FYPO:0004987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sunitinib. Cells stop growing (and may die) at a concentration of sunitinib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to sunitinib","synonyms":[{"name":"hypersensitive to sunitinib","type":"exact"},{"name":"sensitive to sunitinib during mitotic cell cycle","type":"related"},{"name":"sensitive to sunitinib during vegetative growth","type":"exact"}],"termid":"FYPO:0004987"}


id: PBO:0005763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf22","termid":"PBO:0005763"}


id: GO:0140157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an ammonium ion from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMID:16999738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium transmembrane transport","termid":"GO:0072488"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ammonium import across plasma membrane","termid":"GO:0140157"}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: GO:0035012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The terminal region of a polytene chromosome.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete polytene chromosome, telomeric region (obsolete GO:0035012)","termid":"GO:0035012"}


id: PBO:0034179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homocracy_relationship_with","termid":"PBO:0034179"}


id: GO:1902515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of thioredoxin-disulfide reductase activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:10947986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"thioredoxin-disulfide reductase complex","termid":"GO:1902515"}


id: GO:0047663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + kanamycin B = N(6')-acetylkanamycin B + CoA + H+. This is acetylation of the 6'-amino group of the 6-deoxy-6-aminoglucose ring.","definition_xrefs":["RHEA:16449","EC:2.3.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 6'-N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01889","MetaCyc:AMINOGLYCOSIDE-N6-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"6'-aminoglycoside-N-acetyltransferase activity","type":"related"},{"name":"AAC(6') activity","type":"related"},{"name":"acetyl-CoA:kanamycin-B N6'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside N6'-acetyltransferase activity","type":"exact"},{"name":"aminoglycoside-6'-acetyltransferase activity","type":"related"},{"name":"aminoglycoside-6-N-acetyltransferase activity","type":"related"},{"name":"kanamycin 6'-N-acetyltransferase activity","type":"narrow"}],"termid":"GO:0047663"}


id: PBO:0053854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1123","termid":"PBO:0053854"}


id: GO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP-mediated signaling in response to host (obsolete GO:0075175)","synonyms":[{"name":"positive regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"positive regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075175"}


id: GO:0033697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the extent of heterochromatin formation; increases the size of a chromosomal region converted to heterochromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of extent of heterochromatin assembly (obsolete GO:0033697)","synonyms":[{"name":"positive regulation of extent of heterochromatin formation","type":"exact"},{"name":"positive regulation of heterochromatin spreading","type":"related"}],"termid":"GO:0033697"}


id: GO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continual breakdown and regeneration of peptidoglycan required to maintain the cell wall.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan turnover","secondary_identifiers":["GO:0009287"],"synonyms":[{"name":"murein turnover","type":"exact"}],"termid":"GO:0009254"}


id: GO:0019376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactolipid metabolic process","termid":"GO:0019374"},{"relation_name":"is_a","term_name":"glycolipid catabolic process","termid":"GO:0019377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"galactolipid catabolic process","synonyms":[{"name":"galactolipid breakdown","type":"exact"},{"name":"galactolipid catabolism","type":"exact"},{"name":"galactolipid degradation","type":"exact"}],"termid":"GO:0019376"}


id: GO:0019184
data:
  {"annotated_genes":["SJAG_04032","SJAG_01351","SJAG_00792","SJAG_02599","SJAG_04031","SJAG_00988","SJAG_00469","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90174],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043041"},{"annotations":[90184,90176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[104476,114179,89368,93088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[90135],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[101428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The biosynthetic process in which peptide bond formation occurs in the absence of the translational machinery. Examples include the synthesis of antibiotic peptides, and glutathione.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonribosomal peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"non-ribosomal peptide biosynthesis","type":"exact"},{"name":"non-ribosomal peptide biosynthetic process","type":"exact"},{"name":"non-ribosomal peptide formation","type":"exact"},{"name":"non-ribosomal peptide synthesis","type":"exact"},{"name":"nonribosomal peptide anabolism","type":"exact"},{"name":"nonribosomal peptide biosynthesis","type":"exact"},{"name":"nonribosomal peptide formation","type":"exact"},{"name":"nonribosomal peptide synthesis","type":"exact"},{"name":"nonribosomal peptide synthetase","type":"related"}],"termid":"GO:0019184","terms_by_termid":{"GO:0006750":null,"GO:0019290":null,"GO:0031169":null,"GO:0043041":null,"GO:1905569":null}}


id: PBO:0077263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 11, pseudogene","termid":"PBO:0077263"}


id: GO:0072666
data:
  {"annotated_genes":["SJAG_04489","SJAG_03385","SJAG_00380","SJAG_03756","SJAG_05303","SJAG_00416","SJAG_04349","SJAG_01586","SJAG_00108","SJAG_01488","SJAG_16459","SJAG_04912","SJAG_03783","SJAG_01242","SJAG_01281","SJAG_03250","SJAG_04024","SJAG_00204","SJAG_05210","SJAG_02912","SJAG_00821","SJAG_03892","SJAG_03970","SJAG_01088","SJAG_01981","SJAG_01360","SJAG_04936","SJAG_03976","SJAG_00208","SJAG_04552","SJAG_01229","SJAG_02117","SJAG_00181","SJAG_02584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109350,110487,84208,87573,101788,84244,87150,84130,87706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[98187,85019,86278,88190,97174,100101,100121,102781,93472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[107504,86648,102604,92041,94031,84077,105838,106685,103414,88073,84247,87576,101007,105422,96944,87709,112430,110747,88358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a vacuole.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00821":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01488":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05210":null,"SJAG_05303":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to vacuole","type":"exact"}],"termid":"GO:0072666","terms_by_termid":{"GO:0006623":null,"GO:0043328":null,"GO:0120113":null}}


id: PBO:0005401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12 (predicted)","termid":"PBO:0005401"}


id: GO:0008108
data:
  {"annotated_genes":["SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109761],"is_not":false,"summary":null,"term":"GO:0008108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + UDP-D-glucose = alpha-D-glucose 1-phosphate + UDP-D-galactose.","definition_xrefs":["RHEA:13989","EC:2.7.7.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose:hexose-1-phosphate uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GALACTURIDYLYLTRANS-RXN","Reactome:R-HSA-70361","Reactome:R-HSA-5610038","KEGG_REACTION:R00955"],"synonyms":[{"name":"Gal-1-P uridylyltransferase activity","type":"broad"},{"name":"UDP-glucose-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UDP-glucose:alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UDPglucose-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UDPglucose:alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"hexose 1-phosphate uridyltransferase activity","type":"related"},{"name":"hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"uridyl transferase activity","type":"broad"},{"name":"uridyltransferase activity","type":"broad"},{"name":"uridylyl removing enzyme activity","type":"broad"}],"termid":"GO:0008108","terms_by_termid":{"GO:0008108":null}}


id: GO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep.","definition_xrefs":["PMID:11506998","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"regulation of REM sleep","type":"exact"}],"termid":"GO:0042320"}


id: PBO:0004873
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates spo12","termid":"PBO:0004873"}


id: PBO:0048382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 5B","termid":"PBO:0048382"}


id: PBO:0081185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZHX1-C8orf76 readthrough","termid":"PBO:0081185"}


id: PBO:0080610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45B pseudogene 1","termid":"PBO:0080610"}


id: GO:0090017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of anterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate formation","termid":"GO:0021990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neural plate formation","termid":"GO:0090017"}


id: GO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin-3-O-D-rhamnosyl-(1,6)-D-glucoside + UDP-D-glucose = cyanidin-3-O-[D-rhamnosyl-(1,6)-D-glucoside]-5-O-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.116","MetaCyc:2.4.1.116-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyanidin-3-rhamnosylglucoside 5-O-glucosyltransferase activity","secondary_identifiers":["RHEA:12144"],"synonyms":[{"name":"UDP-glucose:cyanidin-3-O-D-rhamnosyl-1,6-D-glucoside 5-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-beta-L-rhamnosyl-(1->6)-beta-D-glucoside 5-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"cyanidin-3-O-rutinoside 5-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cyanidin 3-rhamnosylglucoside 5-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047214"}


id: RO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x develops_in y if x is located in y whilst x is developing","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_in","termid":"RO:0002226"}


id: FYPO:0001731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular glutamate level","termid":"FYPO:0001568"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar glutamate level","synonyms":[{"name":"increased level of glutamate in vacuole","type":"exact"},{"name":"increased vacuolar L-glutamate level","type":"exact"},{"name":"increased vacuolar glutamate level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glutamate level during vegetative growth","type":"exact"},{"name":"increased vacuolar glutamic acid level","type":"related"}],"termid":"FYPO:0001731"}


id: PBO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf12","termid":"PBO:0004207"}


id: GO:0060910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060910"}


id: PATO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000792 repair function value (obsolete PATO:0000792)","termid":"PATO:0000792"}


id: GO:0010865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stipule over time, from its formation to the mature structure. A stipule is one of (usually) a pair of appendages at the bases of leaves in many broad-leaved angiosperms.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stipule development","termid":"GO:0010865"}


id: GO:0051560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the cytoplasm of a cell or between mitochondria and their surroundings.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"mitochondrial calcium ion homeostasis","synonyms":[{"name":"calcium ion homeostasis in mitochondria","type":"exact"},{"name":"calcium ion homeostasis in mitochondrion","type":"exact"},{"name":"mitochondrial calcium ion concentration regulation","type":"exact"},{"name":"regulation of calcium ion concentration in mitochondria","type":"exact"},{"name":"regulation of calcium ion concentration in mitochondrion","type":"exact"},{"name":"regulation of mitochondrial calcium ion concentration","type":"exact"}],"termid":"GO:0051560"}


id: GO:1901897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:19708671","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"}


id: GO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal dipeptide, Xaa-Xbb from Xaa-Xbb-Xcc, except when Xaa is Arg or Lys, or Xbb or Xcc is Pro.","definition_xrefs":["EC:3.4.14.1"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase I activity (obsolete GO:0004214)","secondary_identifiers":["MetaCyc:3.4.14.1-RXN"],"synonyms":[{"name":"DAP I","type":"related"},{"name":"cathepsin C activity","type":"related"},{"name":"cathepsin J activity","type":"related"},{"name":"dipeptide arylamidase I","type":"related"},{"name":"dipeptidyl aminopeptidase I activity","type":"related"},{"name":"dipeptidyl transferase activity","type":"related"},{"name":"dipeptidyl-peptidase I activity","type":"exact"}],"termid":"GO:0004214"}


id: GO:1905917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","PMID:25089138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"positively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"up regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905917"}


id: GO:0031073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of cholesterol at position 26 of the side chain, to produce 26-hydroxycholesterol.","definition_xrefs":["GOC:mah","PMID:950499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol 26-hydroxylase activity","termid":"GO:0031073"}


id: PBO:0047530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 4","termid":"PBO:0047530"}


id: PBO:0085950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant exhibits a respiratory growth defect and synthetic interactions with prohibitin (phb1) and gem1; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085950"}


id: GO:0008940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + acceptor = nitrate + reduced acceptor.","definition_xrefs":["RHEA:21068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitrate reductase activity","synonyms":[{"name":"nitrate reductase (acceptor)","type":"related"},{"name":"nitrite:(acceptor) oxidoreductase","type":"related"},{"name":"nitrite:acceptor oxidoreductase","type":"related"},{"name":"respiratory nitrate reductase activity","type":"narrow"}],"termid":"GO:0008940"}


id: PBO:0084609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YCR029C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR030C","termid":"PBO:0084609"}


id: PBO:0080596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 26","termid":"PBO:0080596"}


id: GO:0140843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 7).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S7 O-GlcNAc transferase activity","termid":"GO:0140843"}


id: GO:0031846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neurotensin receptor binding","synonyms":[{"name":"neurotensin receptor ligand","type":"narrow"}],"termid":"GO:0031846"}


id: GO:1902279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cholecystokinin signaling pathway that results in positive regulation of pancreatic amylase secretion.","definition_xrefs":["GOC:TermGenie","GOC:jc","PMID:19028687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystokinin signaling pathway","termid":"GO:0038188"},{"relation_name":"is_a","term_name":"positive regulation of pancreatic amylase secretion","termid":"GO:1902278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","synonyms":[{"name":"CCK-induced amylase release in pancreatic cell","type":"exact"},{"name":"CCK-mediated pancreatic amylase secretion","type":"exact"},{"name":"CCK-stimulated pancreatic amylase release","type":"exact"},{"name":"activation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"narrow"},{"name":"cholecystokinin-mediated pancreatic amylase secretion","type":"exact"},{"name":"up regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"up-regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"upregulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"}],"termid":"GO:1902279"}


id: GO:0090581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannosylglycerate(out) = protein cysteine + mannosylglycerate phosphate(in).","definition_xrefs":["PMID:14645248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0003824","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-mannosylglycerate-phosphotransferase system transporter activity","termid":"GO:0090581"}


id: PBO:0111811
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0111811"}


id: PBO:0074110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 2","termid":"PBO:0074110"}


id: PBO:0062820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute carrier partner 1","termid":"PBO:0062820"}


id: GO:0140885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type III interferon-mediated signaling in the host organism. Type III interferon is also known as interferon-lambda.","definition_xrefs":["PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type III interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type III interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type III interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140885"}


id: PBO:0043427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit beta 1","termid":"PBO:0043427"}


id: PBO:0039125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inducing factor mitochondria associated 2","termid":"PBO:0039125"}


id: PBO:0028423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_meiosis","termid":"PBO:0028423"}


id: GO:1904008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:20704590"],"gene_count":0,"genotype_count":0,"name":"obsolete response to monosodium glutamate (obsolete GO:1904008)","termid":"GO:1904008"}


id: GO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein serine/threonine phosphatase signaling protein activity (obsolete GO:0005081)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005081"}


id: PBO:0089912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Sal3","termid":"PBO:0089912"}


id: PBO:0056108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 3","termid":"PBO:0056108"}


id: GO:0006930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell.","definition_xrefs":["PMID:14657486","ISBN:0815316194","PMID:11944043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell extension","synonyms":[{"name":"substrate-bound cell migration, cell extension","type":"exact"}],"termid":"GO:0006930"}


id: PBO:0036150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0036150"}


id: PBO:0076964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1 pseudogene 1","termid":"PBO:0076964"}


id: GO:0052328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type III secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type III secretion system (obsolete GO:0052328)","synonyms":[{"name":"interaction with symbiont via protein secreted by type III secretion system","type":"exact"}],"termid":"GO:0052328"}


id: PBO:0086849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulator of the Fps1p glycerol channel; multiply phosphorylated by Hog1p under osmotic stress; contains a pleckstrin homology domain; forms homodimers and heterodimerizes with paralog Ask10p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086849"}


id: PBO:0065344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A pseudogene 1","termid":"PBO:0065344"}


id: GO:1990211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16553894","GOC:ml","PMID:14617079"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of jasmonic acid levels in host (obsolete GO:1990211)","termid":"GO:1990211"}


id: PBO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILVBL antisense RNA 1","termid":"PBO:0051629"}


id: GO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein-FAD linkage via 1'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"protein-FAD linkage","termid":"GO:0018293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-FAD linkage via 1'-(8alpha-FAD)-L-histidine","termid":"GO:0018297"}


id: PBO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C17orf28 ortholog 1","termid":"PBO:0001080"}


id: PBO:0076029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 25 pseudogene 1","termid":"PBO:0076029"}


id: GO:1905806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse pruning.","definition_xrefs":["PMID:27779093","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"exact"},{"name":"regulation of synapse disassembly","type":"exact"},{"name":"regulation of synapse elimination","type":"exact"},{"name":"regulation of synapse removal","type":"exact"}],"termid":"GO:1905806"}


id: PBO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_cellular_hyperosmotic_response","termid":"PBO:0030355"}


id: PBO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimeric","termid":"PBO:0001750"}


id: PBO:0077611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 2","termid":"PBO:0077611"}


id: GO:0022825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete copper-exporting ATPase activity (obsolete GO:0022825)","synonyms":[{"name":"copper-exporting ATPase activity","type":"exact"}],"termid":"GO:0022825"}


id: PBO:0044787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1","termid":"PBO:0044787"}


id: GO:0048657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anther cell wall tapetum cell. The tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:jid","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"anther wall tapetum formation","termid":"GO:0048656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell differentiation","synonyms":[{"name":"tapetal cell differentiation","type":"broad"}],"termid":"GO:0048657"}


id: PBO:0085291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phenylacrylic acid decarboxylase; decarboxylates aromatic carboxylic acids to the corresponding vinyl derivatives; confers resistance to cinnamic acid; overexpression of both Pad1p and Fdc1p increases cinnamic acid decarboxylase activity due to the Pad1p-catalyzed formation of a diffusible cofactor required for Fdc1p activity; contains mRNA binding activity; homolog of E. coli UbiX","termid":"PBO:0085291"}


id: FYPO:0003732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable respiratory chain complex IV in the mitochondria.","definition_xrefs":["PomBase:mah","PMID:16911509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV absent from cell","synonyms":[{"name":"absent mitochondrial respiratory chain complex IV","type":"exact"},{"name":"mitochondrial respiratory chain complex IV absent from cell during mitotic cell cycle","type":"related"},{"name":"mitochondrial respiratory chain complex IV absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003732"}


id: GO:0102607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-12,15-cassadiene-11-one + NADPH + O2 + H+ = 2beta,3beta-dihydroxy-12,15-cassadiene-11-one + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3beta-hydroxy-12,15-cassadiene-11-one 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15433"],"termid":"GO:0102607"}


id: GO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion maturation","termid":"GO:0061553"},{"relation_name":"part_of","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion maturation","synonyms":[{"name":"cranial ganglia maturation","type":"related"}],"termid":"GO:0061558"}


id: GO:0120258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-threonine to form peptidyl-O-acetyl-L-threonine.","definition_xrefs":["PMID:22802624","RESID:AA0423","PMID:16728640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"},{"relation_name":"is_a","term_name":"peptidyl-threonine acetylation","termid":"GO:0120257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine O-acetylation","secondary_identifiers":["RESID:AA0364"],"termid":"GO:0120258"}


id: GO:0043896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in (1->6)-alpha-D-glucans and derived oligosaccharides.","definition_xrefs":["EC:3.2.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glucan 1,6-alpha-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.70-RXN"],"synonyms":[{"name":"exo-1,6-alpha-glucosidase activity","type":"related"},{"name":"exo-1,6-beta-glucosidase","type":"related"},{"name":"glucan alpha-1,6-D-glucohydrolase activity","type":"related"},{"name":"glucan-1,6-alpha-glucosidase activity","type":"exact"},{"name":"glucodextranase activity","type":"related"},{"name":"glucodextrinase","type":"broad"}],"termid":"GO:0043896"}


id: PBQ:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G2 due to glucose limitation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G2 arrest due to glucose limitation","synonyms":[{"name":"cellular quiescence following G2 arrest due to glucose limitation","type":"exact"},{"name":"quiescence following G2 arrest due to glucose limitation","type":"broad"}],"termid":"PBQ:0000004"}


id: GO:1990188
data:
  {"annotated_genes":["SJAG_00471","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101419,112034],"is_not":false,"summary":null,"term":"GO:1990188"}]},"cv_name":"molecular_function","definition":"Binding to euchromatin, a dispersed and relatively uncompacted form of chromatin.","definition_xrefs":["GOC:vw","PMID:22431512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"euchromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990188","terms_by_termid":{"GO:1990188":null}}


id: PBO:0044248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and zona pellucida like domains 1","termid":"PBO:0044248"}


id: PBO:0086199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated","termid":"PBO:0086199"}


id: PATO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000477 good value (obsolete PATO:0000477)","termid":"PATO:0000477"}


id: PBO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 like","termid":"PBO:0070744"}


id: PBO:0030180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_growth","termid":"PBO:0030180"}


id: PBO:0091623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, hry1-antisense","termid":"PBO:0091623"}


id: GO:0060603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary ducts are generated and organized. Mammary ducts are epithelial tubes that transport milk.","definition_xrefs":["GOC:dph","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland duct morphogenesis","termid":"GO:0060603"}


id: PR:Q9USQ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.13","synonyms":[{"name":"Spom972h-syj2","type":"exact"},{"name":"synaptojanin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ6"}


id: FYPO:0008025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic M-phase in which the localization of a protein to the CENP-A containing chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mlr","PMID:35970865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to CENP-A containing chromatin","termid":"FYPO:0004314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to CENP-A containing chromatin during mitosis","synonyms":[{"name":"normal protein localization to CENP-A containing chromatin during mitotic M-phase","type":"exact"},{"name":"normal protein localization to centromeric core region chromatin during mitosis","type":"exact"}],"termid":"FYPO:0008025"}


id: PBO:0074396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 6","termid":"PBO:0074396"}


id: PBO:0057608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-5","termid":"PBO:0057608"}


id: FYPO:0007152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to camphor. Cells stop growing (and may die) at a concentration of camphor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to camphor","synonyms":[{"name":"hypersensitive to camphor","type":"exact"},{"name":"sensitive to camphor during mitotic cell cycle","type":"related"},{"name":"sensitive to camphor during vegetative growth","type":"exact"}],"termid":"FYPO:0007152"}


id: PBO:0088973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucan synthase catalytic subunit Bgs3","termid":"PBO:0088973"}


id: FYPO:0007041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased alkaline phosphatase activity","termid":"FYPO:0007041"}


id: GO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + H2O + O2 = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["EC:1.4.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-glutamate oxidase activity","secondary_identifiers":["RHEA:10028","KEGG_REACTION:R00279","MetaCyc:D-GLUTAMATE-OXIDASE-RXN"],"synonyms":[{"name":"D-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-glutamic acid oxidase activity","type":"related"},{"name":"D-glutamic oxidase activity","type":"related"}],"termid":"GO:0047821"}


id: PBO:0090142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-type precatalytic spliceosome WW domain-binding protein Wbp4","termid":"PBO:0090142"}


id: FYECO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was altered in the experiment, compared to expressing the gene from the genome and its endogenous promoter.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000003 expression level (obsolete FYECO:0000003)","termid":"FYECO:0000003"}


id: FYPO:0002206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen spore population (obsolete FYPO:0002206)","synonyms":[{"name":"inviable enlarged spore population","type":"related"},{"name":"inviable large spore population","type":"related"},{"name":"inviable population of swollen spores","type":"exact"},{"name":"inviable spore population with increased cell size","type":"related"},{"name":"inviable spore population with increased cell volume","type":"exact"}],"termid":"FYPO:0002206"}


id: GO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4-alpha-methyl-delta7-sterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy,delta7-sterol + 3 NADP+ + 3 H2O.","definition_xrefs":["PMID:14653780","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"4-alpha-methyl-delta7-sterol oxidation","synonyms":[{"name":"4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080065"}


id: FYPO:0000741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigment accumulation phenotype","termid":"FYPO:0000739"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular pigment accumulation","synonyms":[{"name":"abnormal cellular pigment accumulation","type":"exact"},{"name":"altered colony color","type":"related"},{"name":"altered colony colour","type":"related"},{"name":"increased cellular pigment accumulation during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000741"}


id: GO:1902849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GOC:TermGenie","GOC:sjp","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neuronal signal transduction","termid":"GO:1902847"},{"relation_name":"positively_regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuronal signal transduction","synonyms":[{"name":"activation of neuronal signal transduction","type":"narrow"},{"name":"up regulation of neuronal signal transduction","type":"exact"},{"name":"up-regulation of neuronal signal transduction","type":"exact"},{"name":"upregulation of neuronal signal transduction","type":"exact"}],"termid":"GO:1902849"}


id: PBO:0036479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone Cox17 (predicted)","termid":"PBO:0036479"}


id: FYPO:0001234
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115192,115193,115286,115287,115395,115420,115440,115497,115498,115533],"is_not":false,"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"viable vegetative cell population","termid":"FYPO:0002060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0001985","FYPO:0002057","FYPO:0005447"],"is_obsolete":false,"name":"slow vegetative cell population growth","references_by_uniquename":{"PMID:23090706":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_03449","SJAG_01355","SJAG_00364","SJAG_03892","SJAG_01242","SJAG_00429","SJAG_00514","SJAG_02763"],"single_locus_genotype_uniquenames":["scd1delta","cox6delta","rad3delta","man1delta","vps32delta","rad26delta","vps4delta","cmp7delta","ned1delta"],"synonyms":[{"name":"decreased cell population proliferation","type":"related"},{"name":"decreased cell proliferation","type":"related"},{"name":"decreased vegetative cell population growth rate","type":"exact"},{"name":"growth defect, slow growth","type":"broad"},{"name":"increased doubling time","type":"related"},{"name":"reduced cell proliferation","type":"related"},{"name":"reduced vegetative cell population growth rate","type":"exact"}],"termid":"FYPO:0001234","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000103":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001234":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0046283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving anthocyanins, any member of a group of intensely colored soluble glycosides of anthocyanidins that occur in plants. They are responsible from most of the scarlet, purple, mauve and blue coloring in higher plants, especially of flowers.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin-containing compound metabolic process","synonyms":[{"name":"anthocyanin metabolic process","type":"exact"},{"name":"anthocyanin metabolism","type":"exact"}],"termid":"GO:0046283"}


id: PBO:0065088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-activated catalytic subunit alpha","termid":"PBO:0065088"}


id: PATO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly by having or as if having an end or point cut off.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated","synonyms":[{"name":"truncate","type":"exact"}],"termid":"PATO:0000936"}


id: FYPO:0007518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage occurring as a side effect of transcription in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah","PMID:33153481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased transcription-induced DNA damage","synonyms":[{"name":"increased DNA damage by transcription","type":"exact"},{"name":"increased transcription-induced DNA damage during mitotic cell cycle","type":"related"},{"name":"increased transcription-induced DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0007518"}


id: SO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base pair region at the 5' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:splice_donor_variant","type":"exact"},{"name":"Seattleseq:splice-donor","type":"exact"},{"name":"VAAST:splice_donor_variant","type":"exact"},{"name":"VEP:splice_donor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_DONOR","type":"exact"},{"name":"splice donor variant","type":"exact"}],"termid":"SO:0001575"}


id: GO:0071736
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgG isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgG immunoglobulin complex","termid":"GO:0071735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgG immunoglobulin complex, circulating","synonyms":[{"name":"IgG antibody","type":"narrow"},{"name":"IgG1 antibody","type":"narrow"},{"name":"IgG2 antibody","type":"narrow"},{"name":"IgG2a antibody","type":"narrow"},{"name":"IgG2b antibody","type":"narrow"},{"name":"IgG2c antibody","type":"narrow"},{"name":"IgG3 antibody","type":"narrow"},{"name":"IgG4 antibody","type":"narrow"}],"termid":"GO:0071736"}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: PBO:0053325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 114","termid":"PBO:0053325"}


id: PBO:0084505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific regulatory subunit of the Glc7p protein phosphatase; regulates spore wall formation and septin organization, required for expression of some late meiotic genes and for normal localization of Glc7p","termid":"PBO:0084505"}


id: PR:Q9UTF7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.03c gene.","definition_xrefs":["UniProtKB:Q9UTF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation of fatty acids protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.03c","synonyms":[{"name":"3-keto acyl-CoA synthase SPAC1B2.03c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1B2.03c","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF7"}


id: GO:0034439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"},{"relation_name":"is_a","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoprotein lipid oxidation","termid":"GO:0034439"}


id: PBO:0062842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 8","termid":"PBO:0062842"}


id: PBO:0034484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cohesin_loading","termid":"PBO:0034484"}


id: PBO:0071148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 12","termid":"PBO:0071148"}


id: PBO:0081425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280C","termid":"PBO:0081425"}


id: GO:0060926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell development","synonyms":[{"name":"pacemaker cell development","type":"broad"}],"termid":"GO:0060926"}


id: PBO:0046973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 85 member B","termid":"PBO:0046973"}


id: PBO:0062375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 18 pseudogene","termid":"PBO:0062375"}


id: GO:0048475
data:
  {"annotated_genes":["SJAG_04609","SJAG_04070","SJAG_00192","SJAG_00284","SJAG_02282","SJAG_04474","SJAG_04517","SJAG_02539","SJAG_04644","SJAG_04391","SJAG_03907","SJAG_02453","SJAG_00800","SJAG_00906","SJAG_00108","SJAG_04931","SJAG_02482","SJAG_01167","SJAG_02805","SJAG_00104","SJAG_04565","SJAG_02177","SJAG_00379","SJAG_04002","SJAG_05345","SJAG_01809","SJAG_01508","SJAG_04569","SJAG_03153","SJAG_02234","SJAG_03558","SJAG_05344","SJAG_03726","SJAG_02349","SJAG_00072"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109039,97177,108821,114878],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[107689,107630,92334,104376],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[107529,90255,92203,85014],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030123"},{"annotations":[107532],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030131"},{"annotations":[108943,90961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[90962],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071439"},{"annotations":[110919,114497],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[94520,94609,109796,113419,100172,103162,112414,89282,99324],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[102606,104770,108014,108752,112632,74036,106249,89420,91586,70464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"A single or double lipid bilayer with any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03726":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04931":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"coated membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048475","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030131":null,"GO:0071439":null}}


id: PBO:0072976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 2","termid":"PBO:0072976"}


id: FYPO:0008140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal nuclear envelope morpbology in the vegetative growth phase of the life cycle in which the nuclear envelope lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"dilated nuclear envelope lumen","termid":"FYPO:0008140"}


id: PBO:0110351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX8C pseudogene 1","termid":"PBO:0110351"}


id: GO:0080153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the reductive pentose-phosphate cycle.","definition_xrefs":["PMID:20399532","PMID:17031544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of reductive pentose-phosphate cycle","termid":"GO:0080152"},{"relation_name":"is_a","term_name":"negative regulation of photosynthesis","termid":"GO:1905156"},{"relation_name":"negatively_regulates","term_name":"reductive pentose-phosphate cycle","termid":"GO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of reductive pentose-phosphate cycle","synonyms":[{"name":"negative regulation of C3 photosynthesis","type":"narrow"},{"name":"negative regulation of Calvin cycle","type":"narrow"}],"termid":"GO:0080153"}


id: GO:0071257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to electrical stimulus","synonyms":[{"name":"cellular response to electricity","type":"related"}],"termid":"GO:0071257"}


id: PATO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular adhesivity","termid":"PATO:0001531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterophilic","termid":"PATO:0001441"}


id: GO:1900761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving averantin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"averantin metabolic process","synonyms":[{"name":"averantin metabolism","type":"exact"}],"termid":"GO:1900761"}


id: PBO:0041825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0041825"}


id: PBO:0059159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPED2 antisense RNA 1","termid":"PBO:0059159"}


id: GO:0071701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of a MAP kinase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAPK export from nucleus (obsolete GO:0071701)","synonyms":[{"name":"regulation of MAPK export from cell nucleus","type":"exact"},{"name":"regulation of MAPK export out of nucleus","type":"exact"},{"name":"regulation of MAPK transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of MAPK-nucleus export","type":"exact"},{"name":"regulation of cytoplasmic translocation of MAP kinase","type":"exact"},{"name":"regulation of cytoplasmic translocation of mitogen-activated protein kinase","type":"exact"}],"termid":"GO:0071701"}


id: PBO:0084853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; MRPL7 produces both YmL5 and YmL7, which are two different modified forms of the same protein","termid":"PBO:0084853"}


id: FYPO:0007597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which CLRC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:23613586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished CLRC complex binding","synonyms":[{"name":"CLRC binding complex abolished","type":"exact"},{"name":"abolished CLRC ubiquitin ligase complex binding","type":"exact"}],"termid":"FYPO:0007597"}


id: PBO:0045943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B3","termid":"PBO:0045943"}


id: PBO:0042954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 8","termid":"PBO:0042954"}


id: FYPO:0002549
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115205,115217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[115216,115204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to stress","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","sty1delta","atf1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"hypersensitive to stress","type":"exact"},{"name":"stress resistance: decreased","type":"related"}],"termid":"FYPO:0002549","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: GO:0010831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotube differentiation","termid":"GO:0010831"}


id: PATO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being perfectly circular.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circular","termid":"PATO:0000411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbicular","termid":"PATO:0001934"}


id: PBO:0089229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit 4","termid":"PBO:0089229"}


id: PBO:0067984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 286","termid":"PBO:0067984"}


id: PBO:0079837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC5B antisense RNA 1","termid":"PBO:0079837"}


id: FYPO:0007022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 2'-O-methylguanosine does not occur.","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished tRNA guanosine 2'-O-methylation","synonyms":[{"name":"2'-O-methylguanosine absent from tRNA","type":"related"},{"name":"abolished tRNA 2'-O-methylguanosine formation","type":"exact"},{"name":"abolished tRNA Gm formation","type":"exact"},{"name":"abolished tRNA guanosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA guanosine 2'-O-methylation during vegetative growth","type":"exact"},{"name":"tRNA guanosine 2'-O-methylation abolished","type":"exact"}],"termid":"FYPO:0007022"}


id: GO:1904542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of free ubiquitin chain polymerization.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:pad","GOC:TermGenie","PMID:24660806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"free ubiquitin chain polymerization","termid":"GO:0010994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of free ubiquitin chain polymerization","termid":"GO:1904542"}


id: PBO:0040050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1B pseudogene 1","termid":"PBO:0040050"}


id: PBO:0065052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 6","termid":"PBO:0065052"}


id: PBO:0061136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 2","termid":"PBO:0061136"}


id: PBO:0108967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIMAP1 family member D","termid":"PBO:0108967"}


id: PBO:0026827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0026827"}


id: GO:0009453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:jl","PMID:11029423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy taxis","synonyms":[{"name":"energytaxis","type":"exact"},{"name":"taxis in response to energy source","type":"exact"}],"termid":"GO:0009453"}


id: PBO:0074189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 10","termid":"PBO:0074189"}


id: GO:1904724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane-enclosed lumen that is part of a tertiary granule.","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","PMID:23650620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"tertiary granule lumen","synonyms":[{"name":"gelatinase granule membrane-enclosed lumen","type":"related"},{"name":"membrane-enclosed lumen of gelatinase granule","type":"exact"},{"name":"membrane-enclosed lumen of tertiary granule","type":"exact"},{"name":"tertiary granule membrane-enclosed lumen","type":"exact"}],"termid":"GO:1904724"}


id: PBO:0003163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 1","termid":"PBO:0003163"}


id: PBO:0043735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 14","termid":"PBO:0043735"}


id: PBO:0058829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8059","termid":"PBO:0058829"}


id: PATO:0000594
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000594 relative volume value (obsolete PATO:0000594)","termid":"PATO:0000594"}


id: MOD:00188
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 6'-bromo-L-tryptophan.","definition_xrefs":["Unimod:340#W","PubMed:9030520","PubMed:12118011","RESID:AA0179","PubMed:9434739","PubMed:9033387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6'-bromo-L-tryptophan","synonyms":[{"name":"6'-bromo-L-tryptophan","type":"exact"},{"name":"(2S)-2-amino-3-(6-bromo-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"6'-BrTrp","type":"exact"},{"name":"Bromo","type":"related"},{"name":"MOD_RES 6'-bromotryptophan","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00188"}


id: GO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-ornithine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-ornithine transmembrane export from vacuole","termid":"GO:0089706"}


id: PBO:0071476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 17","termid":"PBO:0071476"}


id: PATO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001002 alternation value (obsolete PATO:0001002)","termid":"PATO:0001002"}


id: GO:0061980
data:
  {"annotated_genes":["SJAG_03042","SJAG_04061","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114104,84893,108256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035197"}]},"cv_name":"molecular_function","definition":"Binding to a small regulatory RNA, a short RNA (usually 50-200 nt long) that is either independently transcribed or processed from a longer RNA by an RNAse enzyme.","definition_xrefs":["PMID:14622403","PMID:23475961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"regulatory RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061980","terms_by_termid":{"GO:0035197":null}}


id: GO:0110044
data:
  {"annotated_genes":["SJAG_00457","SJAG_03501","SJAG_03048","SJAG_02723","SJAG_03486","SJAG_02404","SJAG_04332","SJAG_01401","SJAG_04682","SJAG_05288","SJAG_01311","SJAG_03371","SJAG_04813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90615,97676,98443,100947,105094],"is_not":false,"summary":null,"term":"GO:0110044"},{"annotations":[105309,98420,114368,102688,100488,101842,102002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[112525,114230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:17674143","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sexual differentiation","type":"related"}],"termid":"GO:0110044","terms_by_termid":{"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: PBO:0072919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class F member 2","termid":"PBO:0072919"}


id: PBO:0011090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16 (predicted)","termid":"PBO:0011090"}


id: PBO:0054900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2314","termid":"PBO:0054900"}


id: GO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of ventricular cardiac muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle tissue development","synonyms":[{"name":"ventricular myocardium development","type":"exact"}],"termid":"GO:0003229"}


id: GO:0005972
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen alpha chain (obsolete GO:0005972)","synonyms":[{"name":"fibrinogen alpha chain","type":"exact"}],"termid":"GO:0005972"}


id: PBO:0013747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor Sif3 (predicted)","termid":"PBO:0013747"}


id: PBO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated kinase 1A","termid":"PBO:0048407"}


id: PBO:0061214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 6","termid":"PBO:0061214"}


id: GO:0030981
data:
  {"annotated_genes":["SJAG_00851","SJAG_00113","SJAG_03073","SJAG_02561","SJAG_01297","SJAG_01224","SJAG_02045","SJAG_00140","SJAG_01613","SJAG_02336","SJAG_02286","SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83871,87070,93638,107436],"is_not":false,"summary":null,"term":"GO:0030981"},{"annotations":[97467,99936,95261,104285,94677,87449],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0055028"},{"annotations":[93639,99800,91272],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[87073],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032117"}]},"cv_name":"cellular_component","definition":"The portion of the microtubule cytoskeleton that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00851":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02561":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cortical microtubule cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030981","terms_by_termid":{"GO:0030981":null,"GO:0032117":null,"GO:0055028":null,"GO:1903754":null}}


id: GO:0090031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of steroid hormone biosynthetic process","termid":"GO:0090031"}


id: GO:0042899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabinan is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"arabinan transmembrane transport","synonyms":[{"name":"arabinan transport","type":"related"}],"termid":"GO:0042899"}


id: GO:0150057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 2. Amylin receptor complex 2 (AMY2) also serves as a receptor for adrenomedullin (AM/ADM).","definition_xrefs":["PMID:22500019","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"amylin receptor complex 2","synonyms":[{"name":"AMY2 complex","type":"exact"}],"termid":"GO:0150057"}


id: GO:0106136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by secretion of lectins which bind to the bacterial surface. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30049880","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lectin-induced modified bacterial internalization","synonyms":[{"name":"LIMBI","type":"exact"}],"termid":"GO:0106136"}


id: GO:0071554
data:
  {"annotated_genes":["SJAG_03013","SJAG_01276","SJAG_04620","SJAG_04851","SJAG_03655","SJAG_04770","SJAG_00598","SJAG_01835","SJAG_04551","SJAG_01021","SJAG_01321","SJAG_00974","SJAG_04906","SJAG_01453","SJAG_02718","SJAG_04668","SJAG_03587","SJAG_01028","SJAG_00442","SJAG_05285","SJAG_03705","SJAG_01029","SJAG_03723","SJAG_00485","SJAG_02278","SJAG_01264","SJAG_01227","SJAG_01787","SJAG_02684","SJAG_01491","SJAG_01288","SJAG_04666","SJAG_02222","SJAG_02468","SJAG_04316","SJAG_00816","SJAG_01290","SJAG_02192","SJAG_04728","SJAG_00610","SJAG_05272","SJAG_01181","SJAG_04789","SJAG_02446","SJAG_03646","SJAG_02649","SJAG_02435","SJAG_04878","SJAG_01646","SJAG_04771","SJAG_04864","SJAG_04236","SJAG_03057","SJAG_03753","SJAG_03123","SJAG_00340","SJAG_00310","SJAG_03295","SJAG_00667","SJAG_02258","SJAG_01963","SJAG_03444","SJAG_04184","SJAG_03631","SJAG_02727","SJAG_01426","SJAG_00876","SJAG_01017","SJAG_04522","SJAG_01171","SJAG_00163","SJAG_02590","SJAG_04327","SJAG_01888","SJAG_02519","SJAG_04483","SJAG_00096","SJAG_01862","SJAG_00978","SJAG_02916","SJAG_03082","SJAG_00424","SJAG_00218","SJAG_03483","SJAG_04850","SJAG_01774","SJAG_00661","SJAG_00620","SJAG_00771","SJAG_04462","SJAG_04073","SJAG_04868","SJAG_04238","SJAG_05001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90535],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[84821,86345,84332,87839,113793],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[105348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[113794,100225,113803,105120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[97562],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034232"},{"annotations":[84822,100700],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006038"},{"annotations":[88334,107020,98197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000196"},{"annotations":[114378,100981,89092,83620,96814,101096,101993,100137,100553,105065,93957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000032"},{"annotations":[90091,96197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044347"},{"annotations":[105121,85251,113804,100226,110421],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[84190,111858,103823,105350,102138,109208,87665,87655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[98693,104658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[97998,97999,104114,91175],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[110422,113796,83633,112589,89395,114773,91323,98307,98897,98511,102139,96670,114338,90126,113916,87666,98306,100053,98297,114001,88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009272"},{"annotations":[84312,98840,84651],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034221"},{"annotations":[84401,85203,98000,107355,104115,90094,98001,96198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[109404,87918,86023,91176,93215,84191,83565,84402,98512,90288,105351,110124,87656,103824,85439,94723,86690,104437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[91289,83566,113479,86689,90909,85830,88335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071852"},{"annotations":[102140],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051278"},{"annotations":[84810,102731],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071966"},{"annotations":[107022,98202],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903340"},{"annotations":[83635,88489],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88491,98901,86862,88475,113918,101377],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[103660,106152,113919,104492,98204],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903338"},{"annotations":[88495,91009,98903,85542],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[88496,88772,96232],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"},{"annotations":[107023,83711,101378],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070882"],"synonyms":[{"name":"cell wall organisation or biogenesis","type":"exact"},{"name":"cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"cellular cell wall organisation or biogenesis","type":"exact"},{"name":"cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:0071554","terms_by_termid":{"GO:0000032":null,"GO:0000196":null,"GO:0006038":null,"GO:0009272":null,"GO:0030476":null,"GO:0031505":null,"GO:0032995":null,"GO:0034221":null,"GO:0034232":null,"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0051278":null,"GO:0060237":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071852":null,"GO:0071966":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null,"GO:1903338":null,"GO:1903340":null,"GO:1904541":null}}


id: PBO:0070585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 51","termid":"PBO:0070585"}


id: PBO:0027918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myriocin_during_mating","termid":"PBO:0027918"}


id: GO:0106178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis the movement of ions or molecules across membranes or their separation within membranes.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity (obsolete GO:0106178)","secondary_identifiers":["EC:7.-.-.-"],"termid":"GO:0106178"}


id: PBO:0062025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 7","termid":"PBO:0062025"}


id: GO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of smooth muscle","synonyms":[{"name":"smooth muscle relaxation","type":"exact"}],"termid":"GO:0044557"}


id: GO:0034547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyromazine + H2O = N-cyclopropylammeline + NH3.","definition_xrefs":["UM-BBD_reactionID:r0825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-cyclopropylmelamine deaminase activity","secondary_identifiers":["MetaCyc:RXN-8018"],"termid":"GO:0034547"}


id: PBO:0111529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 9","termid":"PBO:0111529"}


id: SO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new acceptor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_acceptor","synonyms":[{"name":"cryptic splice acceptor","type":"exact"}],"termid":"SO:0001570"}


id: GO:0090410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of malonate, the propanedioate ion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"malonate catabolic process","termid":"GO:0090410"}


id: GO:0032140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single adenine insertion or a deletion that results in an unpaired adenine.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"single adenine insertion binding","termid":"GO:0032140"}


id: GO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the by propagation of the molecular signals via beta-catenin, and end with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["PMID:11532397","PMID:19619488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical Wnt signaling pathway","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"canonical Wnt receptor signaling pathway","type":"exact"},{"name":"canonical Wnt-activated signaling pathway","type":"exact"},{"name":"frizzled-1 receptor signaling pathway","type":"narrow"}],"termid":"GO:0060070"}


id: GO:0042671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a retinal cone cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate determination","termid":"GO:0043703"},{"relation_name":"part_of","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate determination","termid":"GO:0042671"}


id: PBO:0066381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDX pseudogene 1","termid":"PBO:0066381"}


id: SO:1001217
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a group of genes that are either regulated or transcribed together.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of_regulon","synonyms":[{"name":"member of regulon","type":"exact"}],"termid":"SO:1001217"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: GO:1905450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18832707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of phagocytosis","termid":"GO:0050765"},{"relation_name":"is_a","term_name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:1905449"},{"relation_name":"negatively_regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"down regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"down regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"down regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"down regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"down regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"down-regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"down-regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"down-regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"down-regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"down-regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"downregulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"downregulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"downregulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"downregulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"downregulation of IgG-mediated phagocytosis","type":"exact"},{"name":"inhibition of Fc gamma receptor-dependent phagocytosis","type":"narrow"},{"name":"inhibition of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"narrow"},{"name":"inhibition of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"narrow"},{"name":"inhibition of Fcgamma receptor-mediated phagocytosis","type":"narrow"},{"name":"inhibition of IgG-mediated phagocytosis","type":"narrow"},{"name":"negative regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"negative regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"negative regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"negative regulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905450"}


id: MOD:00195
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-alanine residue and a glycine residue to form L-alanine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0187","PubMed:10220322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1-aminoethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-aminoethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Ala-Gly)","type":"exact"},{"name":"L-alanine 5-imidazolinone glycine","type":"exact"},{"name":"XLNK-1Ala-NGly(Imidazole)","type":"exact"},{"name":"alanyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00195"}


id: GO:0043740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 3 H2O = 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + 2 H+ + 2 phosphate.","definition_xrefs":["RHEA:22468","EC:3.5.4.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GTP cyclohydrolase IIa activity","secondary_identifiers":["KEGG_REACTION:R07306","MetaCyc:RXN-10055"],"synonyms":[{"name":"GTP 8,9-dihydrolase (phosphate-forming)","type":"related"},{"name":"GTP 8,9-hydrolase (phosphate-forming)","type":"exact"},{"name":"GTP cyclohydrolase III activity","type":"narrow"}],"termid":"GO:0043740"}


id: PBO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog","termid":"PBO:0016585"}


id: GO:0034357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane enriched in complexes formed of reaction centers, accessory pigments and electron carriers, in which photosynthetic reactions take place.","definition_xrefs":["GOC:ds","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photosynthetic membrane","termid":"GO:0034357"}


id: PBO:0076905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 261","termid":"PBO:0076905"}


id: PBO:0045411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 4","termid":"PBO:0045411"}


id: GO:1902569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activation of JAK (Janus Activated Kinase) kinase activity.","definition_xrefs":["PMID:16254138","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of Janus kinase activity","termid":"GO:0010533"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"activation of Janus kinase activity","termid":"GO:0042976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activation of Janus kinase activity","synonyms":[{"name":"down regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"down regulation of activation of JAK1 protein","type":"narrow"},{"name":"down regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"down regulation of activation of JAK2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"down-regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"down-regulation of activation of JAK1 protein","type":"narrow"},{"name":"down-regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"down-regulation of activation of JAK2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"},{"name":"downregulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"downregulation of activation of JAK1 protein","type":"narrow"},{"name":"downregulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"inhibition of activation of JAK1 kinase activity","type":"narrow"},{"name":"inhibition of activation of JAK1 protein","type":"narrow"},{"name":"inhibition of activation of JAK2 kinase activity","type":"narrow"},{"name":"inhibition of activation of JAK2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"negative regulation of activation of JAK1 protein","type":"narrow"},{"name":"negative regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"negative regulation of activation of JAK2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of JAK2 protein","type":"related"}],"termid":"GO:1902569"}


id: PBO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein (predicted)","termid":"PBO:0000486"}


id: PBO:0025521
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae KIN28","termid":"PBO:0025521"}


id: GO:1902083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:19198614","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"},{"relation_name":"negatively_regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-cysteine S-nitrosylation","synonyms":[{"name":"down regulation of S-nitrosylation","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down regulation of protein S-nitrosylation","type":"exact"},{"name":"down-regulation of S-nitrosylation","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down-regulation of protein S-nitrosylation","type":"exact"},{"name":"downregulation of S-nitrosylation","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"downregulation of protein S-nitrosylation","type":"exact"},{"name":"inhibition of S-nitrosylation","type":"exact"},{"name":"inhibition of peptidyl-cysteine S-nitrosylation","type":"narrow"},{"name":"inhibition of protein S-nitrosylation","type":"exact"},{"name":"negative regulation of S-nitrosylation","type":"exact"},{"name":"negative regulation of protein S-nitrosylation","type":"exact"}],"termid":"GO:1902083"}


id: PBO:0026639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_interphase","termid":"PBO:0026639"}


id: PBO:0069335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 595, pseudogene","termid":"PBO:0069335"}


id: PBO:0049468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase 2","termid":"PBO:0049468"}


id: PBO:0058270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4648","termid":"PBO:0058270"}


id: GO:0102688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + dihydrozeatin = H+ + 9-(alpha-D-glucosyl)dihydrozeatin + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"dihydrozeatin UDP glycosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4725"],"termid":"GO:0102688"}


id: SO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a transcript encoding the cleavage site for a ribonuclease enzyme.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease_site","synonyms":[{"name":"ribonuclease site","type":"exact"}],"termid":"SO:0001977"}


id: PR:Q10585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase delaying protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.03","synonyms":[{"name":"Spom972h-spd1","type":"exact"},{"name":"protein p14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10585"}


id: PBO:0088141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein with a possible role in sequestering heavy metals; involved in the oxidative stress response and modulation of replicative lifespan; undergoes autophosphorylation, which is abolished by mutation of Asp781 in the catalytic motif (D781N); P5 ATPase subfamily member with similarity to yeast Spf1p and homology of human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome","termid":"PBO:0088141"}


id: GO:0047909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = acylmono-beta-D-galactosyl-diacylglycerol + mono-beta-D-galactosylacylglycerol.","definition_xrefs":["MetaCyc:GALACTOLIPID-O-ACYLTRANSFERASE-RXN","EC:2.3.1.134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"galactolipid O-acyltransferase activity","synonyms":[{"name":"galactolipid:galactolipid acyltransferase activity","type":"related"},{"name":"mono-beta-D-galactosyldiacylglycerol:mono-beta-D-galactosyldiacylglycerol acyltransferase activity","type":"related"}],"termid":"GO:0047909"}


id: GO:1902485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-cysteine.","definition_xrefs":["GOC:TermGenie","PMID:12941942","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-cysteine binding","termid":"GO:1902485"}


id: PBO:0071037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 39","termid":"PBO:0071037"}


id: PBO:0088676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 Pre9","termid":"PBO:0088676"}


id: PBO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding","termid":"PBO:0031561"}


id: PBO:0077353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM92 antisense RNA 1","termid":"PBO:0077353"}


id: PBO:0051886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin alpha FG-GAP repeat containing 1","termid":"PBO:0051886"}


id: PBO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Psu1, beta-glucosidase (predicted)","termid":"PBO:0001201"}


id: GO:1990189
data:
  {"annotated_genes":["SJAG_03537","SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85502,114554],"is_not":false,"summary":null,"term":"GO:1990189"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-serine in peptide = CoA + N-acetyl-L-serine-peptide.","definition_xrefs":["PMID:23912279","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03537":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0034212","GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide-serine-alpha-N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990189","terms_by_termid":{"GO:1990189":null}}


id: SO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomerase RNA gene is a non coding RNA gene the RNA product of which is a component of telomerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase_RNA_gene","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Telomerase_RNA_component"],"synonyms":[{"name":"TERC","type":"exact"},{"name":"Telomerase RNA component","type":"exact"},{"name":"telomerase RNA gene","type":"exact"}],"termid":"SO:0001643"}


id: GO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction dependent upon an immune response, typically a response by a mature T or B cell in the periphery resulting tolerance towards an antigen via induction of anergy, cellular deletion, or regulatory T cell activation.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction dependent upon immune response","synonyms":[{"name":"immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002461"}


id: PBO:0076694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A N-terminal and central domain containing","termid":"PBO:0076694"}


id: GO:0047947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + L-glutamine = CoA + alpha-N-phenylacetyl-L-glutamine.","definition_xrefs":["EC:2.3.1.14","MetaCyc:GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"glutamine N-phenylacetyltransferase activity","secondary_identifiers":["RHEA:21844"],"synonyms":[{"name":"glutamine phenylacetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine N-acetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine alpha-N-phenylacetyltransferase activity","type":"related"}],"termid":"GO:0047947"}


id: PBO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1","termid":"PBO:0042892"}


id: PBO:0017877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nem1-Spo7 complex regulatory subunit (predicted)","termid":"PBO:0017877"}


id: PBO:0066166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 3","termid":"PBO:0066166"}


id: GO:0021520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}


id: GO:0019312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbose metabolic process","termid":"GO:0019311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-sorbose metabolic process","secondary_identifiers":["MetaCyc:P302-PWY"],"synonyms":[{"name":"L-sorbose metabolism","type":"exact"}],"termid":"GO:0019312"}


id: GO:0070004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of C- or N-terminal peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008233","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}


id: PBO:0056631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 11","termid":"PBO:0056631"}


id: PBO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 14","termid":"PBO:0070861"}


id: GO:0051396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of nerve growth factor receptor activity","termid":"GO:0051394"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nerve growth factor receptor activity","synonyms":[{"name":"activation of nerve growth factor receptor activity","type":"narrow"},{"name":"positive regulation of NGF receptor activity","type":"exact"},{"name":"stimulation of nerve growth factor receptor activity","type":"narrow"},{"name":"up regulation of nerve growth factor receptor activity","type":"exact"},{"name":"up-regulation of nerve growth factor receptor activity","type":"exact"},{"name":"upregulation of nerve growth factor receptor activity","type":"exact"}],"termid":"GO:0051396"}


id: GO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of thioredoxin, a small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin reduction (obsolete GO:0042964)","synonyms":[{"name":"thioredoxin anabolism","type":"exact"},{"name":"thioredoxin biosynthesis","type":"exact"},{"name":"thioredoxin formation","type":"exact"},{"name":"thioredoxin synthesis","type":"exact"}],"termid":"GO:0042964"}


id: PBO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof8","termid":"PBO:0002143"}


id: PBO:0084561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif","termid":"PBO:0084561"}


id: PBO:0028251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_septum","termid":"PBO:0028251"}


id: PBO:0083678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein of unknown function; contains a phox (PX) homology domain; binds to both phosphatidylinositol-3-phosphate (PtdIns(3)P) and proteins involved in ER-Golgi or vesicular transport","termid":"PBO:0083678"}


id: FYPO:0004434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide. Cells stop growing (and may die) at a concentration of 4-amino-1-methyl-1H-imidazole-5-carboselenoamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:18204818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","synonyms":[{"name":"hypersensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","type":"exact"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during vegetative growth","type":"exact"}],"termid":"FYPO:0004434"}


id: PBO:0063412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 1A","termid":"PBO:0063412"}


id: PBO:0057527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 644a","termid":"PBO:0057527"}


id: PBO:0078098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 6A","termid":"PBO:0078098"}


id: PBO:0056636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13 pseudogene 1","termid":"PBO:0056636"}


id: GO:0033822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose to a glucosylhydroxymethylcytosine residue in DNA.","definition_xrefs":["EC:2.4.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucosyl-DNA beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.28-RXN"],"synonyms":[{"name":"T6-beta-glucosyl transferase activity","type":"related"},{"name":"T6-glucosyl-HMC-beta-glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:D-glucosyl-DNA beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-glucosyl-DNA beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-glucosyldeoxyribonucleate beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0033822"}


id: PATO:0025000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be used as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potability","synonyms":[{"name":"drinkability","type":"exact"}],"termid":"PATO:0025000"}


id: PBO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Tex1 (predicted)","termid":"PBO:0005260"}


id: GO:0140214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long-chain fatty acid import into a cell.","definition_xrefs":["PMID:28178239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid transport","termid":"GO:2000193"},{"relation_name":"positively_regulates","term_name":"long-chain fatty acid import into cell","termid":"GO:0044539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-chain fatty acid import into cell","termid":"GO:0140214"}


id: PBO:0067683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 870, pseudogene","termid":"PBO:0067683"}


