# terms

id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR12542:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: PBO:0054557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1958","termid":"PBO:0054557"}


id: PBO:0111903
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0111903"}


id: PBO:0069777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1061, pseudogene","termid":"PBO:0069777"}


id: GO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a cytosine residue to uridine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytidine to uridine editing","termid":"GO:0016554"}


id: PBO:0016927
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae NSR1","termid":"PBO:0016927"}


id: PR:Q9Y7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA/RNA-binding protein KIN17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03308","PANTHER:PTHR12805:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIN17-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.09c","secondary_identifiers":["UniProtKB:Q9Y7X9"],"synonyms":[{"name":"Spom972h-KIN","type":"exact"}],"termid":"PR:Q9Y7X9"}


id: PBO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_taxon","termid":"PBO:0034237"}


id: GO:0001584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A G protein-coupled receptor that is structurally/functionally related to the rhodopsin receptor.","definition_xrefs":["GOC:dph","IUPHAR_GPCR:1505","GOC:tb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete rhodopsin-like receptor activity (obsolete GO:0001584)","synonyms":[{"name":"Class A G protein coupled receptor","type":"exact"},{"name":"Class A G-protein coupled receptor","type":"exact"},{"name":"Class A GPCR","type":"exact"},{"name":"class A orphan receptor activity","type":"exact"},{"name":"rhodopsin-like receptor activity","type":"exact"}],"termid":"GO:0001584"}


id: PR:O13951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iwr1 gene.","definition_xrefs":["UniProtKB:O13951","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear localization protein iwr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.08","synonyms":[{"name":"Spom972h-iwr1","type":"exact"}],"termid":"PR:O13951"}


id: PBO:0005768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf73","termid":"PBO:0005768"}


id: GO:0005666
data:
  {"annotated_genes":["SJAG_03761","SJAG_03181","SJAG_03035","SJAG_04408","SJAG_00619","SJAG_02600","SJAG_01765","SJAG_02101","SJAG_04934","SJAG_02070","SJAG_04161","SJAG_00637","SJAG_01444","SJAG_03921","SJAG_01313","SJAG_00731","SJAG_04261"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85653,88102,89080,89975,94222,97555,97594,98732,99397,101823,104483,107512,108421,109846,111703,112494,112801],"is_not":false,"summary":null,"term":"GO:0005666"}]},"cv_name":"cellular_component","definition":"RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02600":null,"SJAG_03035":null,"SJAG_03181":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase III complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase III activity","type":"related"},{"name":"DNA-directed RNA polymerase III complex","type":"exact"}],"termid":"GO:0005666","terms_by_termid":{"GO:0005666":null}}


id: GO:0048749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the compound eye over time, from its formation to the mature structure. The compound eye is an organ of sight that contains multiple repeating units, often arranged hexagonally. Each unit has its own lens and photoreceptor cell(s) and can generate either a single pixelated image or multiple images, per eye.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","Wikipedia:Eye"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye development","secondary_identifiers":["GO:0007456"],"synonyms":[{"name":"insect-type retina development","type":"exact"}],"termid":"GO:0048749"}


id: PBO:0090240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER stress associated protein Tam14","termid":"PBO:0090240"}


id: PBO:0044457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 36, pseudogene","termid":"PBO:0044457"}


id: PBO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U5","termid":"PBO:0004419"}


id: GO:2000677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}


id: FYPO:0007304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short bipolar mitotic spindle","termid":"FYPO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000120"],"is_obsolete":false,"name":"short bipolar mitotic spindle during anaphase","synonyms":[{"name":"decreased mitotic spindle length during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"short mitotic spindles during anaphase","type":"exact"},{"name":"short spindle during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007304"}


id: PBO:0066161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2-type and C3HC4-type zinc finger containing 1","termid":"PBO:0066161"}


id: PR:Q9C0V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arylsulfatase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized sulfatase PB10D8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB10D8.02c","secondary_identifiers":["UniProtKB:Q9C0V7"],"synonyms":[{"name":"Spom972h-ARSB","type":"exact"}],"termid":"PR:Q9C0V7"}


id: FYPO:0002838
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to chromosome during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002838","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: PBO:0082923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c oxidase subunit; has a role in assembly of respiratory supercomplexes; similar to Rcf1p, and either Rcf1p or Rcf2p is required for late-stage assembly of the Cox12p and Cox13p subunits and for cytochrome c oxidase activity; associates with the cytochrome c oxidase - cytochrome bc1 supercomplex; null mutant accumulates reactive oxygen species; member of the conserved hypoxia induced gene family; C. elegans homolog is functional in yeast","termid":"PBO:0082923"}


id: GO:0005924
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An adherens junction which connects a cell to the extracellular matrix.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-substrate adherens junction (obsolete GO:0005924)","synonyms":[{"name":"hemi-adherens junction","type":"related"}],"termid":"GO:0005924"}


id: GO:1904762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast differentiation.","definition_xrefs":["GOC:rph","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","PMID:20533548","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myofibroblast differentiation","termid":"GO:1904760"},{"relation_name":"positively_regulates","term_name":"myofibroblast differentiation","termid":"GO:0036446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast differentiation","synonyms":[{"name":"activation of myofibroblast cell differentiation","type":"narrow"},{"name":"activation of myofibroblast differentiation","type":"narrow"},{"name":"positive regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast differentiation","type":"exact"},{"name":"up-regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up-regulation of myofibroblast differentiation","type":"exact"},{"name":"upregulation of myofibroblast cell differentiation","type":"exact"},{"name":"upregulation of myofibroblast differentiation","type":"exact"}],"termid":"GO:1904762"}


id: PBO:0079154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 14","termid":"PBO:0079154"}


id: PBO:0083662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) membrane protein; involved in the translocation of soluble secretory proteins and insertion of membrane proteins into the ER membrane; may also have a role in the stress response but has only partial functional overlap with WSC1-3","termid":"PBO:0083662"}


id: PBO:0058505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5695","termid":"PBO:0058505"}


id: PBO:0090245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase inhibitor and disassembly protein linked to MTOR","termid":"PBO:0090245"}


id: PBO:0038851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 19","termid":"PBO:0038851"}


id: PBO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha B-subunit","termid":"PBO:0005070"}


id: FYPO:0003206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to salt stress. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to salt stress","synonyms":[{"name":"decreased protein binding during cellular response to salt stress","type":"exact"},{"name":"decreased protein-protein interaction during salt stress","type":"exact"},{"name":"decreased protein-protein interaction in response to salt stress","type":"related"},{"name":"reduced protein-protein interaction during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003206"}


id: PBO:0057458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 577","termid":"PBO:0057458"}


id: GO:0061761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-latrotoxin receptor.","definition_xrefs":["GOC:dph","PMID:21724987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-latrotoxin receptor binding","synonyms":[{"name":"lasso receptor binding","type":"exact"},{"name":"latrophilin binding","type":"exact"}],"termid":"GO:0061761"}


id: PBO:0002659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel2/Rad-5/Clk-2 family protein Tel2","termid":"PBO:0002659"}


id: PBO:0066652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD50 interactor 1","termid":"PBO:0066652"}


id: GO:0034631
data:
  {"annotated_genes":["SJAG_01613","SJAG_03116","SJAG_01546","SJAG_03835","SJAG_03062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[92841,95280,99106,105073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["PMID:17486116","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"},{"relation_name":"part_of","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to SPB","type":"exact"},{"name":"attachment of spindle microtubules to spindle pole body","type":"exact"},{"name":"microtubule anchoring at SPB","type":"exact"}],"termid":"GO:0034631","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0046184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 3","termid":"PBO:0046184"}


id: PBO:0028711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_regional_homologous_chromosome_pairing","termid":"PBO:0028711"}


id: GO:2000676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell apoptotic process","termid":"GO:2000674"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"positive regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"positive regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"positive regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000676"}


id: PBO:0038354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_effector_activity","termid":"PBO:0038354"}


id: GO:0019863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of the IgE isotype.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IgE binding","termid":"GO:0019863"}


id: GO:0072128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the renal capsule are generated and organized. The renal capsule is the tough fibrous layer surrounding the kidney, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage. During development, it comprises a single layer of flattened cells that lie just above the cortical stroma and the condensed mesenchyme of the nephrogenic zone. It is in this region that the early stages of nephron induction and formation of new generations ureteric bud branches occur, as the kidney expands.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"renal capsule development","termid":"GO:0072127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule morphogenesis","termid":"GO:0072128"}


id: GO:0038134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to an epidermal growth factor receptor (EGFR/ERBB1) on the surface of a cell, followed by transmission of the signal by a heterodimeric complex of ERBB2 and EGFR. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as EGFR.","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"is_a","term_name":"ERBB2 signaling pathway","termid":"GO:0038128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB2-EGFR signaling pathway","synonyms":[{"name":"EGFR-HER2 signaling pathway","type":"exact"},{"name":"ERBB2-EGFR signalling pathway","type":"exact"}],"termid":"GO:0038134"}


id: PBO:0086615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086615"}


id: PBO:0069660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 937, pseudogene","termid":"PBO:0069660"}


id: PBO:0064392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 14","termid":"PBO:0064392"}


id: PBO:0027661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027661"}


id: PBO:0064595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 1","termid":"PBO:0064595"}


id: PBO:0043064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRFAM7A pseudogene 2","termid":"PBO:0043064"}


id: SO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variably distant linear promoter region recognized by TFIIIC, with consensus sequence AGGTTCCAnnCC.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B_box","synonyms":[{"name":"B-box","type":"exact"}],"termid":"SO:0000620"}


id: GO:2000884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"glucomannan metabolic process","termid":"GO:0010391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucomannan catabolic process","synonyms":[{"name":"glucomannan catabolism","type":"exact"}],"termid":"GO:2000884"}


id: PBO:0079049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 5-1","termid":"PBO:0079049"}


id: FYPO:0006757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is normal (i.e. indistinguishable from wild type) when the cell is subject to glucose starvation.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"normal chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"normal chromatin binding at promoter element during glucose deprivation","type":"related"}],"termid":"FYPO:0006757"}


id: PBO:0036471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth3 (predicted)","termid":"PBO:0036471"}


id: PBO:0044165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-lyase","termid":"PBO:0044165"}


id: PBO:0036101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_aseptate_cell_with_mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0036101"}


id: PBO:0086646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of vacuole with cell cycle-correlated morphology","termid":"PBO:0086646"}


id: PBO:0061855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin family member 5, pseudogene","termid":"PBO:0061855"}


id: GO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"}


id: GO:1905943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19737525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sprouting of injured axon","termid":"GO:0048688"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"negatively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of growth cone in injured axon","synonyms":[{"name":"down regulation of formation of growth cone in injured axon","type":"exact"},{"name":"down-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"downregulation of formation of growth cone in injured axon","type":"exact"},{"name":"inhibition of formation of growth cone in injured axon","type":"narrow"}],"termid":"GO:1905943"}


id: PBO:0088886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase","termid":"PBO:0088886"}


id: PBO:0067164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 217, pseudogene","termid":"PBO:0067164"}


id: GO:0140669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of oxytocin production","termid":"GO:0140667"},{"relation_name":"negatively_regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of oxytocin production","termid":"GO:0140669"}


id: PBO:0039681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 2","termid":"PBO:0039681"}


id: GO:0097099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.","definition_xrefs":["GOC:jj","Wikipedia:Albumen"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of albumen","synonyms":[{"name":"structural constituent of egg white","type":"exact"}],"termid":"GO:0097099"}


id: PBO:0071289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 12","termid":"PBO:0071289"}


id: PBO:0029580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_low_temperature","termid":"PBO:0029580"}


id: PBO:0004856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13a","termid":"PBO:0004856"}


id: GO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H+ + phosphate.","definition_xrefs":["PMID:18411271","RHEA:28094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"undecaprenyl-diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R05627","MetaCyc:UNDECAPRENYL-DIPHOSPHATASE-RXN","EC:3.6.1.27"],"synonyms":[{"name":"C(55)-isoprenyl diphosphatase activity","type":"related"},{"name":"C(55)-isoprenyl pyrophosphatase activity","type":"related"},{"name":"C55-isoprenyl diphosphatase activity","type":"related"},{"name":"C55-isoprenyl pyrophosphatase activity","type":"related"},{"name":"isoprenyl pyrophosphatase activity","type":"related"},{"name":"undecaprenyl-diphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050380"}


id: PR:P40388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uvi15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein uvi15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.04","synonyms":[{"name":"Spom972h-uvi15","type":"exact"}],"termid":"PR:P40388"}


id: GO:1900009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:15020466"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900009)","synonyms":[{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"positive regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900009"}


id: GO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}


id: FYPO:0002875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"},{"relation_name":"is_a","term_name":"increased gene expression","termid":"FYPO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription","termid":"FYPO:0002875"}


id: GO:0072243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The metanephric nephron epithelium is a tissue that covers the surface of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron epithelium development","termid":"GO:0072243"}


id: PBO:0084628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylglyoxalase that converts methylglyoxal to D-lactate; involved in oxidative stress resistance, diauxic shift, and stationary phase survival; has similarity to E. coli Hsp31 and C. albicans Glx3p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer; exists as a dimer and contains a putative metal-binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0084628"}


id: PBO:0011429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1 (predicted)","termid":"PBO:0011429"}


id: GO:1901809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of capsanthin.","definition_xrefs":["GOC:TermGenie","PMID:10995282","UniPathway:UPA00806","GOC:yaf","MetaCyc:PWY-5174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsanthin biosynthetic process","synonyms":[{"name":"capsanthin formation","type":"exact"},{"name":"capsanthin synthesis","type":"exact"},{"name":"capsanthin anabolism","type":"exact"},{"name":"capsanthin biosynthesis","type":"exact"}],"termid":"GO:1901809"}


id: PBO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.8","termid":"PBO:0000826"}


id: GO:0008537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome activator complex","synonyms":[{"name":"PA28","type":"narrow"}],"termid":"GO:0008537"}


id: GO:1900568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of chanoclavine-I aldehyde.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I aldehyde catabolic process (obsolete GO:1900568)","synonyms":[{"name":"chanoclavine-I aldehyde breakdown","type":"exact"},{"name":"chanoclavine-I aldehyde catabolism","type":"exact"},{"name":"chanoclavine-I aldehyde degradation","type":"exact"}],"termid":"GO:1900568"}


id: PBO:0035726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0035726"}


id: GO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH.","definition_xrefs":["RHEA:23632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.41","Reactome:R-HSA-70967","MetaCyc:ISOCITRATE-DEHYDROGENASE-NAD+-RXN"],"synonyms":[{"name":"NAD dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitric dehydrogenase activity","type":"exact"},{"name":"NAD-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NAD) activity","type":"exact"},{"name":"isocitrate:NAD+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"nicotinamide adenine dinucleotide isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004449"}


id: GO:0002101
data:
  {"annotated_genes":["SJAG_05249","SJAG_02099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89999,84384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"}]},"cv_name":"biological_process","definition":"The process in which a cytosine in position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02099":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble cytosine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002101","terms_by_termid":{"GO:0002127":null}}


id: PR:O94330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid acetyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.14","synonyms":[{"name":"AGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-acetylglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NAGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arg6","type":"exact"},{"name":"arginine-requiring protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate N-acetyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94330"}


id: PBO:0078329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-1","termid":"PBO:0078329"}


id: GO:0043450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene biosynthetic process","synonyms":[{"name":"alkene anabolism","type":"exact"},{"name":"alkene biosynthesis","type":"exact"},{"name":"alkene formation","type":"exact"},{"name":"alkene synthesis","type":"exact"}],"termid":"GO:0043450"}


id: PBO:0060098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 45","termid":"PBO:0060098"}


id: PBO:0036193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromeric_chromatin,_with_protein_mislocalized_to_nucleoplasm","termid":"PBO:0036193"}


id: GO:0102049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-methionine + ATP(4-) = H+ + indole-3-acetyl-methionine + AMP(2-) + diphosphoric acid.","definition_xrefs":["PMID:15659623","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"indole-3-acetyl-methionine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10431"],"termid":"GO:0102049"}


id: PBO:0080774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 5","termid":"PBO:0080774"}


id: GO:1903011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone development.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:22510437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of bone development","termid":"GO:1903010"},{"relation_name":"negatively_regulates","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone development","synonyms":[{"name":"down regulation of bone development","type":"exact"},{"name":"down-regulation of bone development","type":"exact"},{"name":"downregulation of bone development","type":"exact"},{"name":"inhibition of bone development","type":"narrow"}],"termid":"GO:1903011"}


id: GO:0016621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamaldehyde + CoA + NADP+ = cinnamoyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.2.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cinnamoyl-CoA reductase activity","secondary_identifiers":["MetaCyc:CINNAMOYL-COA-REDUCTASE-RXN","RHEA:10620"],"synonyms":[{"name":"cinnamaldehyde:NADP+ oxidoreductase (CoA-cinnamoylating)","type":"related"},{"name":"cinnamoyl CoA reductase activity","type":"exact"},{"name":"cinnamoyl-CoA:NADPH reductase activity","type":"related"},{"name":"cinnamoyl-coenzyme A reductase activity","type":"related"},{"name":"feruloyl coenzyme A reductase activity","type":"related"},{"name":"feruloyl-CoA reductase activity","type":"related"},{"name":"ferulyl-CoA reductase activity","type":"related"},{"name":"p-hydroxycinnamoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0016621"}


id: GO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of intermediate filament, typically made up of one or more of the proteins vimentin, desmin, glial fibrillary acidic protein (GFAP), and peripherin. Unlike the keratins, the type III proteins can form both homo- and heteropolymeric IF filaments.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type III intermediate filament","synonyms":[{"name":"desmin","type":"narrow"},{"name":"glial fibrillary acidic protein","type":"narrow"},{"name":"peripherin","type":"narrow"},{"name":"type III intermediate filament associated protein","type":"narrow"},{"name":"vimentin","type":"narrow"}],"termid":"GO:0045098"}


id: FYPO:0000866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000866"}


id: PBO:0042149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 8","termid":"PBO:0042149"}


id: GO:1900741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"}


id: GO:0050509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP.","definition_xrefs":["EC:2.4.1.225","MetaCyc:2.4.1.225-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9036289","Reactome:R-HSA-2022856","Reactome:R-HSA-2076392","RHEA:20908","Reactome:R-HSA-3656267","Reactome:R-HSA-3656257","Reactome:R-HSA-9036285"],"synonyms":[{"name":"N-acetylglucosaminyl-proteoglycan 4-b-glucuronosyltransferase activity","type":"exact"},{"name":"N-acetylglucosaminylproteoglycan beta-1,4-glucuronyltransferase activity","type":"related"},{"name":"UDP-alpha-D-glucuronate:N-acetyl-alpha-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 4-beta-glucuronosyltransferase activity","type":"related"},{"name":"heparan glucuronyltransferase II activity","type":"related"}],"termid":"GO:0050509"}


id: FYPO:0004818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of transfer RNA genes measured in a cell is lower than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased antisense RNA level","termid":"FYPO:0004816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased tDNA antisense small RNA level","synonyms":[{"name":"decreased accumulation of tDNA antisense small RNAs","type":"related"},{"name":"decreased antisense small RNA at tDNA","type":"exact"},{"name":"decreased antisense transcription-derived small RNA level at tDNA","type":"exact"},{"name":"decreased tDNA antisense small RNA accumulation","type":"related"},{"name":"decreased tDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased tDNA antisense small RNA level during vegetative growth","type":"exact"},{"name":"reduced tDNA antisense small RNA level","type":"exact"}],"termid":"FYPO:0004818"}


id: PR:Q9C105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone deacetylase complex subunit SAP130 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase-like protein PB1E7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.04c","secondary_identifiers":["UniProtKB:Q9C105"],"synonyms":[{"name":"Spom972h-SAP130","type":"exact"}],"termid":"PR:Q9C105"}


id: PBO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 4","termid":"PBO:0071381"}


id: GO:0033736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + H2O + O2 = allysine + H2O2 + NH4.","definition_xrefs":["RHEA:22548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-lysine 6-oxidase activity","secondary_identifiers":["EC:1.4.3.20","MetaCyc:1.4.3.20-RXN","KEGG_REACTION:R07598"],"synonyms":[{"name":"L-lysine-epsilon-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 6-oxidoreductase (deaminating) activity","type":"related"},{"name":"Lod","type":"related"},{"name":"LodA","type":"related"},{"name":"marinocine","type":"related"}],"termid":"GO:0033736"}


id: PBO:0079472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWF2 divergent transcript","termid":"PBO:0079472"}


id: GO:0075218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in a symbiont zoospore during the process of its encystment. Encystment means to enter a state of essentially suspended animation in which the spore is protected by an outer coating and remains immobile and inactive until favorable conditions for growth occur again. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore encystment","termid":"GO:0075214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zoospore encystment on host","termid":"GO:0075218"}


id: PBO:0034633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV_during_mitotic_S_phase","termid":"PBO:0034633"}


id: PBO:0004932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II (predicted)","termid":"PBO:0004932"}


id: FYPO:0003793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to osmotic stress","synonyms":[{"name":"normal RNA accumulation during cellular response to osmotic stress","type":"related"},{"name":"normal RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"normal transcript level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0003793"}


id: GO:0050054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-bis(4-hydroxy-3-methoxyphenyl)ethylene + O2 = 2 vanillin.","definition_xrefs":["EC:1.13.11.43","RHEA:21340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lignostilbene alpha beta-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R00043","MetaCyc:LIGNOSTILBENE-ALPHA-BETA-DIOXYGENASE-RXN"],"synonyms":[{"name":"1,2-bis(4-hydroxy-3-methoxyphenyl)ethylene:oxygen oxidoreductase (alphabeta-bond-cleaving)","type":"related"},{"name":"lignostilbene ab-dioxygenase activity","type":"exact"},{"name":"lignostilbene alphabeta-dioxygenase activity","type":"related"}],"termid":"GO:0050054"}


id: PBO:0059022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 11","termid":"PBO:0059022"}


id: PR:O94710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04559","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.10","secondary_identifiers":["UniProtKB:O94710"],"synonyms":[{"name":"N6-L-threonylcarbamoyladenine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-OSGEPL1","type":"exact"},{"name":"pombe glycoprotease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein pgp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein pgp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94710"}


id: PBO:0076884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 36","termid":"PBO:0076884"}


id: PBO:0005655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm7 (predicted)","termid":"PBO:0005655"}


id: PBO:0084926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3' end processing factor; essential component of cleavage and polyadenylation factor IA (CF IA), involved in pre-mRNA 3' end processing and in transcription termination; binds C-terminal domain of largest subunit of RNA pol II (Rpo21p); required for gene looping; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084926"}


id: PBO:0081372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 211","termid":"PBO:0081372"}


id: MOD:00389
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-formyl-L-proline.","definition_xrefs":["RESID:AA0384","Unimod:122#N-term","PubMed:12051774","PubMed:5464655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formyl-L-proline","synonyms":[{"name":"(2S)-1-formylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-formyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-formylproline","type":"exact"},{"name":"N-formyl-L-proline","type":"exact"},{"name":"N-formylated L-proline","type":"exact"},{"name":"NFoPro","type":"exact"}],"termid":"MOD:00389"}


id: PBO:0042014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 71","termid":"PBO:0042014"}


id: GO:0034527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-8-carboxynaphthalene + O2 = 2-carboxy-2-hydroxy-8-carboxychromene.","definition_xrefs":["UM-BBD_reactionID:r0790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1,2-dihydroxy-8-carboxynaphthalene dioxygenase activity","termid":"GO:0034527"}


id: GO:0044620
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding to the attachment site of the phosphopantetheine prosthetic group of an acyl carrier protein (ACP).","definition_xrefs":["GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prosthetic group binding","termid":"GO:0051192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ACP phosphopantetheine attachment site binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044620","terms_by_termid":{"GO:0000036":null}}


id: PBO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170 pseudogene 1","termid":"PBO:0042793"}


id: SO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glutamine anticodon, and a 3' glutamine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glutamic_acid_tRNA_primary_transcript","termid":"SO:0000216"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl_tRNA","synonyms":[{"name":"glutaminyl tRNA","type":"exact"},{"name":"glutaminyl-transfer RNA","type":"exact"},{"name":"glutaminyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000259"}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: GO:0072766
data:
  {"annotated_genes":["SJAG_01745","SJAG_02737","SJAG_05196","SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85691,87416,98873,112974],"is_not":false,"summary":null,"term":"GO:0072766"}]},"cv_name":"biological_process","definition":"The process in which chromatin, or kinetochores are anchored to the nuclear envelope. This process involves the microtubule cytoskeleton, and nuclear tethering factors and is responsible for the Rabl-like configuration of chromosomes in the interphase nuclei.","definition_xrefs":["GOC:mah","PMID:23166349","GOC:vw","PMID:21965289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01745":null,"SJAG_02737":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"centromere clustering at the mitotic interphase nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering at the mitotic nuclear envelope","type":"related"},{"name":"centromere clustering at the nuclear periphery","type":"broad"},{"name":"centromere-SPB clustering","type":"broad"},{"name":"kinetochore clustering at SPB","type":"broad"},{"name":"kinetochore clustering at spindle pole body","type":"broad"},{"name":"kinetochore clustering at the old mitotic spindle pole body","type":"exact"},{"name":"kinetochore localization at spindle pole body","type":"broad"},{"name":"rabl configuration","type":"related"}],"termid":"GO:0072766","terms_by_termid":{"GO:0072766":null}}


id: PBO:0081538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 449","termid":"PBO:0081538"}


id: GO:0097144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAX, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAX complex","termid":"GO:0097144"}


id: PBO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha and beta receptor subunit 1","termid":"PBO:0050949"}


id: GO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell.","definition_xrefs":["PMID:17009929","GOC:cilia","GOC:dgh","GOC:kmv","PMID:20144998","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"motile cilium","secondary_identifiers":["GO:0031512","GO:0009434"],"synonyms":[{"name":"microtubule-based flagellum","type":"related"},{"name":"motile cilia","type":"exact"},{"name":"motile primary cilia","type":"related"},{"name":"motile primary cilium","type":"related"},{"name":"motile secondary cilium","type":"related"},{"name":"nodal cilium","type":"related"}],"termid":"GO:0031514"}


id: PBO:0087007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Riboflavin synthase; catalyzes the last step of the riboflavin biosynthesis pathway","termid":"PBO:0087007"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: GO:2001057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a reactive nitrogen species.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive nitrogen species metabolic process","synonyms":[{"name":"RNS metabolic process","type":"exact"},{"name":"RNS metabolism","type":"exact"},{"name":"reactive nitrogen species metabolism","type":"exact"}],"termid":"GO:2001057"}


id: GO:0032376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sterol transport","termid":"GO:0032373"},{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"positively_regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cholesterol transport","synonyms":[{"name":"activation of cholesterol transport","type":"narrow"},{"name":"stimulation of cholesterol transport","type":"narrow"},{"name":"up regulation of cholesterol transport","type":"exact"},{"name":"up-regulation of cholesterol transport","type":"exact"},{"name":"upregulation of cholesterol transport","type":"exact"}],"termid":"GO:0032376"}


id: PBO:0041506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 28","termid":"PBO:0041506"}


id: PBO:0043944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin alpha A","termid":"PBO:0043944"}


id: PBO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf29","termid":"PBO:0004561"}


id: GO:0019472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxyproline metabolic process","termid":"GO:0019471"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyproline biosynthetic process","synonyms":[{"name":"4-hydroxyproline anabolism","type":"exact"},{"name":"4-hydroxyproline biosynthesis","type":"exact"},{"name":"4-hydroxyproline formation","type":"exact"},{"name":"4-hydroxyproline synthesis","type":"exact"}],"termid":"GO:0019472"}


id: PBO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_unknown","termid":"PBO:0034695"}


id: FYPO:0004598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G2 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G2 phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004598"}


id: PBO:0084245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner plaque spindle pole body (SPB) component; gamma-tubulin small complex (gamma-TuSC) receptor that interacts with Spc98p to recruit the complex to the nuclear side of the SPB, connecting nuclear microtubules to the SPB; promotes gamma-TuSC assembly and oligomerization to initiate microtubule nucleation; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner; ortholog of human pericentrin (kendrin)","termid":"PBO:0084245"}


id: GO:0031471
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing enzymes for the degradation of ethanolamine whose purpose is the protection of the rest of the cell from the toxic acetaldehyde product of the enzyme ethanolamine ammonia lyase.","definition_xrefs":["GOC:js","PMID:11844753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ethanolamine degradation polyhedral organelle","synonyms":[{"name":"ethanolamine metabolosome","type":"related"}],"termid":"GO:0031471"}


id: PBO:0073099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 3","termid":"PBO:0073099"}


id: PBO:0011988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YPR127W date=19700101","termid":"PBO:0011988"}


id: PBO:0044896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing MTOR interacting protein","termid":"PBO:0044896"}


id: FYPO:0004869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Crb2 accumulates is lower than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:15226425","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Crb2 foci during cellular response to ionizing radiation","synonyms":[{"name":"decreased number of Crb2 foci during cellular response to IR","type":"exact"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced number of Crb2 foci during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004869"}


id: PATO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Branchiness quality inhering in a bearer by virtue of decreasing the degree to which there are subdivisions or offshoots in a bearer entity.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased branchiness","termid":"PATO:0002286"}


id: RO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_overlaps","termid":"RO:0002490"},{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"RO:0002497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","termid":"RO:0002492"}


id: FYPO:0001065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of threonine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal threonine import","synonyms":[{"name":"abnormal L-threonine import","type":"exact"},{"name":"abnormal L-threonine import across plasma membrane","type":"exact"},{"name":"abnormal threonine import during mitotic cell cycle","type":"related"},{"name":"abnormal threonine import during vegetative growth","type":"exact"},{"name":"abnormal threonine import into cell","type":"exact"},{"name":"abnormal threonine uptake","type":"exact"}],"termid":"FYPO:0001065"}


id: PATO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being broken down; caved in.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collapsed","termid":"PATO:0001478"}


id: PBO:0017707
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CDC43","termid":"PBO:0017707"}


id: PBO:0075218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snurportin 1","termid":"PBO:0075218"}


id: GO:0110148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process where mineral crystals are formed and deposited in an organized fashion in a matrix (either cellular or extracellular) by living organisms. This gives rise to inorganic compound-based structures such as skeleton, teeth, ivory, shells, cuticle, and corals as well as bacterial biomineralization products.","definition_xrefs":["GOC:aa","PMID:28229486","PMID:24395694"],"gene_count":0,"genotype_count":0,"name":"obsolete biomineralization (obsolete GO:0110148)","secondary_identifiers":["Wikipedia:Biomineralization"],"synonyms":[{"name":"biomineral formation","type":"narrow"},{"name":"biomineralisation","type":"exact"},{"name":"mineralisation","type":"exact"},{"name":"mineralization","type":"exact"}],"termid":"GO:0110148"}


id: GO:0102863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:3-2-18:1-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:2-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-18:3-2-18:1-phosphatidylcholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8330"],"termid":"GO:0102863"}


id: PBO:0043572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VIII alpha 2 chain","termid":"PBO:0043572"}


id: GO:0044044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance on the surface of the other (symbiont) organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance in symbiont surface (obsolete GO:0044044)","termid":"GO:0044044"}


id: PBO:0063613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4","termid":"PBO:0063613"}


id: PBO:0087502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GID Complex that binds directly to central component Vid30p; GID complex is involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase; Gid7p contains six WD40 repeats; computational analysis suggests that Gid7p and Moh1p have similar functions","termid":"PBO:0087502"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: PBO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-3-phosphate synthase 1","termid":"PBO:0051882"}


id: GO:0102514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + ferulate + H+.","definition_xrefs":["EC:2.4.1.300","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14446"],"termid":"GO:0102514"}


id: PBO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 13","termid":"PBO:0050103"}


id: PBO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 3","termid":"PBO:0050093"}


id: PBO:0048821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 5","termid":"PBO:0048821"}


id: GO:2001232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to prospore membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of protein localization to prospore membrane","termid":"GO:2001231"},{"relation_name":"positively_regulates","term_name":"protein localization to prospore membrane","termid":"GO:1902657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to prospore membrane","synonyms":[{"name":"positive regulation of protein localisation to prospore membrane","type":"exact"},{"name":"positive regulation of protein targeting to FSM","type":"related"},{"name":"positive regulation of protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"positive regulation of protein targeting to forespore membrane","type":"related"},{"name":"positive regulation of protein targeting to prospore membrane","type":"related"},{"name":"positive regulation of protein-prospore membrane targeting","type":"related"}],"termid":"GO:2001232"}


id: GO:0090113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The GTP hydrolysis process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis (obsolete GO:0090113)","termid":"GO:0090113"}


id: GO:0019062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.","definition_xrefs":["GOC:jl","UniProtKB-KW:KW-1161","VZ:956","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion attachment to host cell","synonyms":[{"name":"viral absorption","type":"exact"},{"name":"viral attachment to host cell","type":"related"},{"name":"virion attachment to host cell surface receptor","type":"narrow"}],"termid":"GO:0019062"}


id: PBO:0043684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactosin like F-actin binding protein 1","termid":"PBO:0043684"}


id: PBO:0079515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase","termid":"PBO:0079515"}


id: PBO:0083938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactose permease; required for utilization of galactose; also able to transport glucose","termid":"PBO:0083938"}


id: GO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + lauroyl-CoA + oxaloacetate = (2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate + CoA + H+.","definition_xrefs":["RHEA:16605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"decylcitrate synthase activity","secondary_identifiers":["EC:2.3.3.2","MetaCyc:DECYLCITRATE-SYNTHASE-RXN","KEGG_REACTION:R03735"],"synonyms":[{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA- acylating) activity","type":"related"},{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA-acylating)","type":"related"},{"name":"2-decylcitrate synthase activity","type":"related"},{"name":"dodecanoyl-CoA:oxaloacetate C-dodecanoyltransferase (thioester-hydrolysing, 1-carboxyundecyl-forming)","type":"related"}],"termid":"GO:0050457"}


id: PBO:0108955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA5 pseudogene 1","termid":"PBO:0108955"}


id: PR:Q9UT50
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slf1 gene.","definition_xrefs":["UniProtKB:Q9UT50","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C821.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.03c","synonyms":[{"name":"Spom972h-slf1","type":"exact"}],"termid":"PR:Q9UT50"}


id: PR:O42662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA large subunit methyltransferase F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase-like protein C27D7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.08c","secondary_identifiers":["UniProtKB:O42662"],"synonyms":[{"name":"Spom972h-rlmF","type":"exact"}],"termid":"PR:O42662"}


id: SO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a tmRNA (SO:0000584).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_primary_transcript","synonyms":[{"name":"10Sa RNA primary transcript","type":"related"},{"name":"ssrA RNA primary transcript","type":"related"},{"name":"tmRNA primary transcript","type":"exact"}],"termid":"SO:0000586"}


id: MOD:00473
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["URL:http://dx.doi.org/10.1002/rcm.517","Unimod:95","PubMed:11746907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMID d4","synonyms":[{"name":"IMID d4","type":"related"},{"name":"IMID:2H(4)","type":"related"}],"termid":"MOD:00473"}


id: GO:1990536
data:
  {"annotated_genes":["SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89399,108300],"is_not":false,"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpyruvate into the Golgi lumen across the Golgi membrane.","definition_xrefs":["PMID:25195688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transport","termid":"GO:0089722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990536","terms_by_termid":{"GO:1990536":null}}


id: GO:1903347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GOC:TermGenie","PMID:25050009","GO_REF:0000058","GOC:jz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"negatively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of bicellular tight junction assembly","synonyms":[{"name":"down regulation of tight junction assembly","type":"exact"},{"name":"down regulation of tight junction formation","type":"exact"},{"name":"down-regulation of tight junction assembly","type":"exact"},{"name":"down-regulation of tight junction formation","type":"exact"},{"name":"downregulation of tight junction assembly","type":"exact"},{"name":"downregulation of tight junction formation","type":"exact"},{"name":"inhibition of tight junction assembly","type":"narrow"},{"name":"inhibition of tight junction formation","type":"narrow"},{"name":"negative regulation of tight junction formation","type":"exact"}],"termid":"GO:1903347"}


id: PBO:0027877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nucleosome_binding","termid":"PBO:0027877"}


id: PBO:0046975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B2","termid":"PBO:0046975"}


id: GO:0015933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An oxidoreductase which contains either flavin-adenine dinucleotide or flavin mononucleotide as a prosthetic group, utilizes either NADH or NADPH and transfers electrons to other electron transfer proteins.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete flavin-containing electron transporter (obsolete GO:0015933)","synonyms":[{"name":"flavin-containing electron transporter","type":"exact"}],"termid":"GO:0015933"}


id: FYPO:0004330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type) at telomeres. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PMID:17032733","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic telomeric DNA separation","synonyms":[{"name":"normal mitotic chromosome separation at telomere","type":"exact"},{"name":"normal mitotic sister chromatid separation at telomere","type":"exact"},{"name":"normal mitotic telomere disjunction","type":"exact"},{"name":"normal mitotic telomeric DNA separation during vegetative growth","type":"exact"},{"name":"normal telomere separation","type":"exact"},{"name":"normal telomeric DNA separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004330"}


id: PBO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 10","termid":"PBO:0072292"}


id: PBO:0062719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily Q member 1","termid":"PBO:0062719"}


id: PBO:0067875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 177","termid":"PBO:0067875"}


id: GO:1905915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:TermGenie","PMID:25089138","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"}


id: PBO:0005049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght5","termid":"PBO:0005049"}


id: GO:0032339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inhibin secretion","termid":"GO:0032338"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inhibin secretion","synonyms":[{"name":"down regulation of inhibin secretion","type":"exact"},{"name":"down-regulation of inhibin secretion","type":"exact"},{"name":"downregulation of inhibin secretion","type":"exact"},{"name":"inhibition of inhibin secretion","type":"narrow"}],"termid":"GO:0032339"}


id: GO:0099101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A potassium channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:9429760","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"G-protein gated potassium channel activity","termid":"GO:0099101"}


id: PBO:0076042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 39","termid":"PBO:0076042"}


id: FYPO:0002826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal gamma-tubulin complex assembly","synonyms":[{"name":"normal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"normal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002826"}


id: FYPO:0007202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at an rDNA spacer replication fork barrier by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:18794373","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-stranded DNA binding","termid":"FYPO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal rDNA spacer replication fork barrier binding","synonyms":[{"name":"normal DNA binding at rDNA spacer replication fork barrier","type":"exact"}],"termid":"FYPO:0007202"}


id: SO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the allele by virtue of the number instances of the allele within a population. This is the relative frequency of the allele at a given locus in a population.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelic_frequency","secondary_identifiers":["wikipedia:Allele_frequency"],"termid":"SO:0002119"}


id: PBO:0087486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); complex is required for the loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during double-strand break repair via phosphorylated histone H2AX","termid":"PBO:0087486"}


id: PR:Q9P777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidinol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.13","secondary_identifiers":["UniProtKB:Q9P777"],"synonyms":[{"name":"HDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisD","type":"exact"}],"termid":"PR:Q9P777"}


id: GO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.","definition_xrefs":["PMID:12588810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brown fat cell differentiation","synonyms":[{"name":"brown adipocyte cell differentiation","type":"exact"},{"name":"brown adipocyte differentiation","type":"exact"}],"termid":"GO:0050873"}


id: PR:P41820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bfr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A resistance protein Bfr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.01c","synonyms":[{"name":"SPCC18B5.01c","type":"related"},{"name":"Spom972h-bfr1","type":"exact"},{"name":"hba2","type":"related"}],"termid":"PR:P41820"}


id: PBO:0055575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3011","termid":"PBO:0055575"}


id: GO:0102068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1E,4E,8E)-alpha-humulene + NADPH + O2 + H+ = 10-hydroxy-alpha-humulene + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.14.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-humulene 10-hydroxylase activity","secondary_identifiers":["RHEA:32491","MetaCyc:RXN-10628"],"termid":"GO:0102068"}


id: GO:0060444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland duct is generated and organized. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland branching morphogenesis","type":"exact"}],"termid":"GO:0060444"}


id: PBO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHSL1 antisense RNA 1","termid":"PBO:0061006"}


id: PATO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity inhering in a tissue constituent by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific ph conditions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidophilic","termid":"PATO:0002418"}


id: PR:Q10316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.04c","synonyms":[{"name":"Spom972h-arc5","type":"exact"},{"name":"arp2/3 complex 16 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p16-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10316"}


id: GO:0050849
data:
  {"annotated_genes":["SJAG_02858","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97045,112172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-mediated signaling.","definition_xrefs":["GOC:ai","PMID:11696592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium-mediated signaling","type":"exact"},{"name":"down-regulation of calcium-mediated signaling","type":"exact"},{"name":"downregulation of calcium-mediated signaling","type":"exact"},{"name":"inhibition of calcium-mediated signaling","type":"narrow"},{"name":"negative regulation of calcium-mediated signalling","type":"exact"}],"termid":"GO:0050849","terms_by_termid":{"GO:0106057":null}}


id: FYPO:0007051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular stress response to zinc ions. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during cellular response to zinc ion","termid":"FYPO:0001550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"altered protein level during stress response to zinc ion","synonyms":[{"name":"abnormal protein level during stress response to zinc ion","type":"exact"},{"name":"altered cellular protein level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to excess zinc","type":"exact"},{"name":"altered protein level during cellular response to high zinc level","type":"exact"},{"name":"altered protein level during cellular response to replete zinc","type":"related"},{"name":"altered protein level during cellular stress response to zinc ion","type":"exact"},{"name":"altered protein level during response to zinc ion stress","type":"exact"},{"name":"altered protein level during response to zinc toxicity","type":"related"},{"name":"altered protein level during stress response to zinc","type":"exact"},{"name":"altered protein level during stress response to zinc ion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007051"}


id: GO:1904332
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107801],"is_not":false,"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22761594","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"negative regulation of error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down regulation of error-prone translesion synthesis","type":"exact"},{"name":"down regulation of mutagenic PRR","type":"exact"},{"name":"down regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone translesion synthesis","type":"exact"},{"name":"down-regulation of mutagenic PRR","type":"exact"},{"name":"down-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone translesion synthesis","type":"exact"},{"name":"downregulation of mutagenic PRR","type":"exact"},{"name":"downregulation of mutagenic postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone translesion synthesis","type":"narrow"},{"name":"inhibition of mutagenic PRR","type":"narrow"},{"name":"inhibition of mutagenic postreplication DNA repair","type":"related"},{"name":"negative regulation of error-prone postreplication DNA repair","type":"related"},{"name":"negative regulation of mutagenic PRR","type":"exact"},{"name":"negative regulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904332","terms_by_termid":{"GO:1904332":null}}


id: GO:1904106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus.","definition_xrefs":["PMID:25335890","GO_REF:0000087","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microvillus","synonyms":[{"name":"protein localisation in microvillus","type":"exact"},{"name":"protein localisation to microvillus","type":"exact"},{"name":"protein localization in microvillus","type":"exact"}],"termid":"GO:1904106"}


id: PATO:0000998
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity quality inhering in a bearer by virtue of the bearer's having viscosity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viscosity","termid":"PATO:0000992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viscous","termid":"PATO:0000998"}


id: FYPO:0000266
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[115206,115522,115613,115218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000097"},{"annotations":[115191,115183,115190,115360,115358,115189,115359,115184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115180,115187,115181,115186,115188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a genotoxin, any chemical compound that can act to induce direct or indirect DNA damage. Cells stop growing (and may die) at a concentration of a DNA damaging agent that allows wild type cells to grow.","definition_xrefs":["CHEBI:50902","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative 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crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01205","SJAG_01680"],"name":"sensitive to DNA damaging agents","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:27678009":null,"PMID:31150379":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04312","SJAG_00364","SJAG_01605","SJAG_01680","SJAG_02592","SJAG_02527","SJAG_00266","SJAG_00429","SJAG_01205","SJAG_04287","SJAG_04671","SJAG_01410"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","rad51delta","mrc1delta","pka1delta","atf1delta","cds1delta","chk1delta","rad26delta","crb2delta","rad9delta","rad3delta","sty1delta"],"synonyms":[{"name":"hypersensitive to DNA damaging agents","type":"exact"},{"name":"sensitive to DNA damaging agents during mitotic cell cycle","type":"related"},{"name":"sensitive to DNA damaging agents during vegetative growth","type":"exact"}],"termid":"FYPO:0000266","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0075089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 139","termid":"PBO:0075089"}


id: PBO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59 (predicted)","termid":"PBO:0005302"}


id: PBO:0064291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like B2","termid":"PBO:0064291"}


id: PBO:0062947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 5","termid":"PBO:0062947"}


id: PBO:0069951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1244, pseudogene","termid":"PBO:0069951"}


id: PBO:0004443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse4","termid":"PBO:0004443"}


id: PBO:0027257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_mitosis","termid":"PBO:0027257"}


id: FYECO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Inorganic phosphate was excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate absent","termid":"FYECO:0000337"}


id: PBO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 2","termid":"PBO:0043209"}


id: PBO:0050982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 46","termid":"PBO:0050982"}


id: PBO:0077666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 12A","termid":"PBO:0077666"}


id: PBO:0072504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 33","termid":"PBO:0072504"}


id: PBO:0049004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 2","termid":"PBO:0049004"}


id: PBO:0069762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1045, pseudogene","termid":"PBO:0069762"}


id: PBO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar phosphatase (predicted)","termid":"PBO:0002403"}


id: GO:0036177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}


id: PBO:0088911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor, Tea1-interacting protein implicated in exocytosis","termid":"PBO:0088911"}


id: PR:Q9P6J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02335","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized deaminase C1683.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.02","secondary_identifiers":["UniProtKB:Q9P6J8"],"synonyms":[{"name":"Spom972h-ADA","type":"exact"}],"termid":"PR:Q9P6J8"}


id: PBO:0084470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator of meiosis that is active only during meiotic events; activates transcription of early meiotic genes through interaction with Ume6p; degraded by the 26S proteasome following phosphorylation by Ime2p; transcription is negatively regulated in cis by the IRT1 long noncoding antisense RNA","termid":"PBO:0084470"}


id: GO:0071719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene transport","termid":"GO:0071716"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sodium-independent leukotriene transport","termid":"GO:0071719"}


id: PATO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination quality of inhering in a bearer by virtue of the bearer's having skillful and effective interaction of movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coordination","termid":"PATO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinated","termid":"PATO:0000769"}


id: GO:0051059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NF-kappaB binding","termid":"GO:0051059"}


id: GO:0070833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with an initial N-methylation with phospho-base phosphoethanolamine, followed by two downstream N-methylations on phosphatidyl-bases, phosphatidyl-N-methylethanolamine and phosphatidyl-N-dimethylethanolamine. The process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via CDP-N-methylethanolamine","termid":"GO:0070833"}


id: PATO:0001466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the front of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved rostral","synonyms":[{"name":"curved anterior","type":"exact"},{"name":"curved superior (human torso)","type":"exact"}],"termid":"PATO:0001466"}


id: PBO:0054947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2361","termid":"PBO:0054947"}


id: PBO:0050773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-thioester dehydratase type 2","termid":"PBO:0050773"}


id: PBO:0065519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 1","termid":"PBO:0065519"}


id: GO:1901989
data:
  {"annotated_genes":["SJAG_04573","SJAG_01210","SJAG_03048","SJAG_04332","SJAG_03699","SJAG_00216","SJAG_01401","SJAG_03126","SJAG_03486","SJAG_01825","SJAG_03592","SJAG_00082","SJAG_02404","SJAG_04140","SJAG_04597","SJAG_01456","SJAG_01801","SJAG_01837","SJAG_02342","SJAG_04968","SJAG_01805","SJAG_00117","SJAG_02336","SJAG_02498","SJAG_00214","SJAG_03353","SJAG_03309","SJAG_03591","SJAG_03681","SJAG_04486","SJAG_02451","SJAG_01000","SJAG_01311","SJAG_02723","SJAG_03602","SJAG_04259","SJAG_01297","SJAG_02380","SJAG_00145","SJAG_00256","SJAG_02169","SJAG_01901","SJAG_01679","SJAG_03067","SJAG_02592","SJAG_00883","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95641,109829,104297,103274,99950,111940,86815,108000,110309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[98430,89822,108002,86095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[102003,102695,97675,101846,113099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[84177,112714,87803,95055,90482,107241,103277,99549,104619,90443,89873,84168,112526,92396,94502,88208,106387,90613,97812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[97435,83973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[90614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[91231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[93768,96190,107413,110310,110810,98163,98437,89876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[111944,111374,87815,104939,97677,102006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle phase transition.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","PMID:22841721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"positively_regulates","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00145":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01679":null,"SJAG_01801":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03126":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03486":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle phase transition","type":"narrow"},{"name":"activation of cell cycle transition","type":"exact"},{"name":"positive regulation of cell cycle transition","type":"exact"},{"name":"up regulation of cell cycle phase transition","type":"exact"},{"name":"up regulation of cell cycle transition","type":"exact"},{"name":"up-regulation of cell cycle phase transition","type":"exact"},{"name":"up-regulation of cell cycle transition","type":"exact"},{"name":"upregulation of cell cycle phase transition","type":"exact"},{"name":"upregulation of cell cycle transition","type":"exact"}],"termid":"GO:1901989","terms_by_termid":{"GO:0007089":null,"GO:0010971":null,"GO:0031536":null,"GO:0045842":null,"GO:0110032":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1905191":null,"GO:1905287":null}}


id: PBO:0053426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 368","termid":"PBO:0053426"}


id: GO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A RNA polymerase I-specific transcription factor complex that contains the TATA-box-binding protein (TBP) and at least three TBP-associated factors including proteins known in mammals as TAFI110, TAFI63 and TAFI48.","definition_xrefs":["PMID:15691654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulator complex","termid":"GO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005575","GO:0005730","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase transcription factor SL1 complex","synonyms":[{"name":"TIF-IB","type":"exact"},{"name":"selectivity factor SL1 complex","type":"exact"}],"termid":"GO:0005668"}


id: GO:0032266
data:
  {"annotated_genes":["SJAG_04010","SJAG_00638","SJAG_03250","SJAG_02248","SJAG_03851","SJAG_00115","SJAG_01519","SJAG_04963","SJAG_01135","SJAG_00173","SJAG_00314","SJAG_02587","SJAG_00971","SJAG_04024","SJAG_01783","SJAG_01382","SJAG_04219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86673,87578,92008,93680,94675,95756,95888,95889,96340,97767,100869,104701,105692,105839,106038,108502,111265],"is_not":false,"summary":null,"term":"GO:0032266"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' position.","definition_xrefs":["PMID:10209156","GOC:bf","PMID:11395417","PMID:11557775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00173":null,"SJAG_00314":null,"SJAG_00638":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_01519":null,"SJAG_01783":null,"SJAG_02248":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04219":null,"SJAG_04963":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns-3-P binding","type":"exact"},{"name":"phosphatidylinositol 3-phosphate binding","type":"exact"}],"termid":"GO:0032266","terms_by_termid":{"GO:0032266":null}}


id: GO:0034433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a steroid ester is formed by the combination of a carboxylic acid (often a fatty acid) and a steroid molecule (e.g. cholesterol).","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid esterification (obsolete GO:0034433)","termid":"GO:0034433"}


id: PBO:0081225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYM4 antisense RNA 1","termid":"PBO:0081225"}


id: GO:0061459
data:
  {"annotated_genes":["SJAG_04637","SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93435,96416,99899],"is_not":false,"summary":null,"term":"GO:0061459"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-arginine from one side of a membrane to the other.","definition_xrefs":["GOC:dph","RHEA:32143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-arginine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005288","GO:0015598","GO:0102022","GO:0015181","MetaCyc:RXN66-448"],"synonyms":[{"name":"ATP-dependent L-arginine transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled L-arginine transmembrane transporter activity","type":"narrow"},{"name":"L-arginine transporter activity","type":"exact"},{"name":"L-arginine-importing ATPase activity","type":"narrow"},{"name":"arginine permease activity","type":"broad"},{"name":"arginine porter activity","type":"narrow"},{"name":"arginine transmembrane transporter activity","type":"exact"},{"name":"arginine-importing ATPase activity","type":"narrow"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0061459","terms_by_termid":{"GO:0061459":null}}


id: PBO:0076128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting like 2","termid":"PBO:0076128"}


id: FYPO:0002393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein acetylation during vegetative growth","synonyms":[{"name":"abolished protein acetylation during mitotic cell cycle","type":"related"},{"name":"protein acetylation abolished during vegetative growth","type":"exact"},{"name":"protein acetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002393"}


id: PBO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_negative_regulation_of","termid":"PBO:0034103"}


id: PBO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG15 ubiquitin like modifier","termid":"PBO:0051865"}


id: GO:0018861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoate + CoA + ATP = 4-chlorobenzoyl-CoA + AMP + diphosphate. This reaction requires magnesium and is part of the bacterial 2,4-dichlorobenzoate degradation pathway.","definition_xrefs":["EC:6.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"4-chlorobenzoate-CoA ligase activity","secondary_identifiers":["RHEA:23220","UM-BBD_reactionID:r0139","KEGG_REACTION:R03932","MetaCyc:6.2.1.33-RXN"],"synonyms":[{"name":"4-chlorobenzoate:CoA ligase activity","type":"exact"}],"termid":"GO:0018861"}


id: FYPO:0006421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Fbh1 (also called Rad22) accumulates is lower than normal.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Fbh1 foci during vegetative growth","synonyms":[{"name":"decreased number of Fbh1 foci during mitotic cell cycle","type":"related"},{"name":"reduced number of Fbh1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0006421"}


id: GO:0051217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["PMID:12910261","RESID:AA0375","PDB:1Q16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"},{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","termid":"GO:0051217"}


id: PBO:0045572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 22","termid":"PBO:0045572"}


id: PBO:0068382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 183","termid":"PBO:0068382"}


id: GO:0060922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an atrioventricular (AV) node cell. AV node cells are pacemaker cells that are found in the atrioventricular node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum cell differentiation","termid":"GO:0003292"},{"relation_name":"is_a","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"},{"relation_name":"part_of","term_name":"atrioventricular node development","termid":"GO:0003162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular node cell differentiation","synonyms":[{"name":"AV node cell differentiation","type":"related"}],"termid":"GO:0060922"}


id: PBO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Nrf1","termid":"PBO:0003716"}


id: GO:0031584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of inactive phospholipase D.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of phospholipase D activity","termid":"GO:0031584"}


id: PBO:0005312
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ10A","termid":"PBO:0005312"}


id: GO:0060820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome: autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by the mechanism of heterochromatin formation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by heterochromatin formation (obsolete GO:0060820)","synonyms":[{"name":"inactivation of X chromosome by heterochromatin assembly","type":"exact"}],"termid":"GO:0060820"}


id: PBO:0076808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin bundle interacting protein 1","termid":"PBO:0076808"}


id: FYPO:0005794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is bent along the long axis when the cell undergoes transition from G0 phase to G1. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bent cell","termid":"FYPO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"bent cell during G0 to G1 transition","synonyms":[{"name":"bent cell during cell cycle re-entry at G1","type":"exact"},{"name":"bent cell during cell quiescence to G1 transition","type":"exact"},{"name":"bent cell during exit from cell quiescence into G1","type":"exact"},{"name":"bent cell during quiescence to G1 transition","type":"exact"},{"name":"bent cell during recovery from quiescence following G1 arrest","type":"exact"},{"name":"bent cell during recovery from quiescence into G1","type":"exact"}],"termid":"FYPO:0005794"}


id: GO:0060386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a synapse within a target tissue in which a nerve is invading.","definition_xrefs":["GOC:pr","GOC:dph","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"},{"relation_name":"part_of","term_name":"innervation","termid":"GO:0060384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"synapse assembly involved in innervation","synonyms":[{"name":"synapse biogenesis involved in innervation","type":"exact"},{"name":"synaptogenesis involved in innervation","type":"exact"}],"termid":"GO:0060386"}


id: GO:1903671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GOC:TermGenie","PMID:16756958","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"negatively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sprouting angiogenesis","synonyms":[{"name":"down regulation of sprouting angiogenesis","type":"exact"},{"name":"down-regulation of sprouting angiogenesis","type":"exact"},{"name":"downregulation of sprouting angiogenesis","type":"exact"},{"name":"inhibition of sprouting angiogenesis","type":"narrow"}],"termid":"GO:1903671"}


id: PBO:0081197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIM2 antisense RNA 1","termid":"PBO:0081197"}


id: PBO:0026899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026899"}


id: PBO:0079712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4 pseudogene 2","termid":"PBO:0079712"}


id: FYPO:0006278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PomBase:mah","PMID:22988247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0003290","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal O-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006278"}


id: GO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of tyramine to form octopamine.","definition_xrefs":["PMID:10745161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tyramine-beta hydroxylase activity","termid":"GO:0004836"}


id: PBO:0016534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub2","termid":"PBO:0016534"}


id: GO:0031583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of phospholipase D (PLD) and a subsequent increase in the intracellular concentration of phosphatidic acid (PA).","definition_xrefs":["GOC:mah","GOC:signaling","PMID:15924269","PMID:11812783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase D-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"G-protein signalling, phospholipase D activating pathway","type":"exact"},{"name":"activation of phospholipase D activity by G-protein coupled receptor protein signaling pathway","type":"related"},{"name":"phospholipase D-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0031583"}


id: GO:0008063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Toll on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:19126860","GOC:go_curators","PMID:11135568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Toll signaling pathway","synonyms":[{"name":"Tl signaling pathway","type":"exact"},{"name":"Tl signalling pathway","type":"exact"},{"name":"Toll signalling pathway","type":"exact"}],"termid":"GO:0008063"}


id: GO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in the anterior lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell migration","termid":"GO:0048896"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration in anterior lateral line nerve","termid":"GO:0048912"}


id: GO:1904819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:15840053","GO_REF:0000094","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parietal peritoneum development","synonyms":[{"name":"peritoneal cavity lining development","type":"exact"}],"termid":"GO:1904819"}


id: PBO:0084050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for Gpa1p; regulates desensitization to alpha factor pheromone; also required to prevent receptor-independent signaling of the mating pathway; member of the RGS (regulator of G-protein signaling) family","termid":"PBO:0084050"}


id: PBO:0046790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ezrin","termid":"PBO:0046790"}


id: PBO:0077720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNPO3 pseudogene 1","termid":"PBO:0077720"}


id: PATO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a cane.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cane-like","synonyms":[{"name":"cane-shaped","type":"related"}],"termid":"PATO:0002511"}


id: PBO:0063376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 2, ethanolamine","termid":"PBO:0063376"}


id: PR:P40848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-3' exoribonuclease 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12341:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.12c","secondary_identifiers":["UniProtKB:P40848"],"synonyms":[{"name":"SPAC26A3.12c","type":"related"},{"name":"Spom972h-XRN2","type":"exact"},{"name":"protein dhp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40848"}


id: PBO:0083972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase); likely involved in carbohydrate metabolism; GFP-fusion protein localizes to both the nucleus and cytoplasm and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0083972"}


id: PBO:0029127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuole_fusion","termid":"PBO:0029127"}


id: PBO:0070007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1304, pseudogene","termid":"PBO:0070007"}


id: GO:0018998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete metaxin (obsolete GO:0018998)","synonyms":[{"name":"metaxin","type":"exact"}],"termid":"GO:0018998"}


id: GO:1903137
data:
  {"annotated_genes":["SJAG_03263","SJAG_04522","SJAG_01114","SJAG_02392","SJAG_04825","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114315,91924,103087,95496,103656,99863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of MAPK cascade involved in cell wall organization or biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated MAPK cascade","termid":"GO:0032872"},{"relation_name":"regulates","term_name":"cell wall integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"regulation of Mpk1 cascade","type":"narrow"},{"name":"regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"regulation of Slt2 cascade","type":"narrow"},{"name":"regulation of cell integrity MAPK pathway","type":"exact"},{"name":"regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"}],"termid":"GO:1903137","terms_by_termid":{"GO:1903138":null}}


id: GO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription process that uses viral RNA as a template.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-templated viral transcription","termid":"GO:0039696"}


id: GO:0075529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a circular structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a circular episome","synonyms":[{"name":"establishment of circular plasmid latency","type":"exact"},{"name":"establishment of latency as a circular plasmid","type":"exact"}],"termid":"GO:0075529"}


id: PBO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component Ecm29","termid":"PBO:0002672"}


id: PBO:0065335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 59, pseudogene","termid":"PBO:0065335"}


id: GO:2000069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-embryonic root development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of root development","termid":"GO:2000280"},{"relation_name":"regulates","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-embryonic root development","termid":"GO:2000069"}


id: GO:0032737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of interleukin-14 production (obsolete GO:0032737)","synonyms":[{"name":"activation of interleukin-14 production","type":"narrow"},{"name":"positive regulation of IL-14 production","type":"exact"},{"name":"positive regulation of interleukin-14 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-14 production","type":"narrow"},{"name":"up regulation of interleukin-14 production","type":"exact"},{"name":"up-regulation of interleukin-14 production","type":"exact"},{"name":"upregulation of interleukin-14 production","type":"exact"}],"termid":"GO:0032737"}


id: PBO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, ribosome associated Sks2","termid":"PBO:0090034"}


id: GO:0009509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast","secondary_identifiers":["Wikipedia:Chromoplast"],"termid":"GO:0009509"}


id: FYPO:0002658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular trehalose 6-phosphate level","synonyms":[{"name":"increased cellular trehalose 6-phosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular trehalose 6-phosphate level during vegetative growth","type":"exact"},{"name":"increased cellular trehalose-6P level","type":"exact"},{"name":"increased trehalose 6-phosphate accumulation","type":"related"}],"termid":"FYPO:0002658"}


id: PBO:0060677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDNF antisense RNA 1","termid":"PBO:0060677"}


id: PBO:0061733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin","termid":"PBO:0061733"}


id: MOD:00946
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues with a covalent bond and the loss of ammonia.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"}


id: PBO:0087427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0087427"}


id: PBO:0041086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 1","termid":"PBO:0041086"}


id: PBO:0035756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_salt_stress","termid":"PBO:0035756"}


id: PBO:0077480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200C","termid":"PBO:0077480"}


id: PBO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system_organization","termid":"PBO:0031040"}


id: PBO:0084748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial malate dehydrogenase; catalyzes interconversion of malate and oxaloacetate; involved in the tricarboxylic acid (TCA) cycle; phosphorylated; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0084748"}


id: PBO:0057833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3150b","termid":"PBO:0057833"}


id: PBO:0075204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 16","termid":"PBO:0075204"}


id: PBO:0050559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine rich carboxyl terminus 1","termid":"PBO:0050559"}


id: PR:O94405
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C126.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.13c","synonyms":[{"name":"Spom972h-SPCC126.13c","type":"exact"}],"termid":"PR:O94405"}


id: GO:0005368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of taurine from one side of a membrane to the other. Taurine (2-aminoethanesulfonic acid) is a sulphur-containing amino acid derivative which is important in the metabolism of fats.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"taurine transmembrane transporter activity","termid":"GO:0005368"}


id: PBO:0082413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase; catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP","termid":"PBO:0082413"}


id: GO:0010354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a prenyl group from one compound (donor) to homogentisic acid.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}


id: GO:1901790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","MetaCyc:1.13.11.16-RXN","MetaCyc:HCAMHPDEG-PWY","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901790"}


id: PBO:0067973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 275","termid":"PBO:0067973"}


id: PR:Q9URX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.05c gene.","definition_xrefs":["UniProtKB:Q9URX1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC93-like protein C922.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.05c","synonyms":[{"name":"Spom972h-SPAC922.05c","type":"exact"}],"termid":"PR:Q9URX1"}


id: FYECO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrous sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeSO4","synonyms":[{"name":"iron sulfate added","type":"exact"},{"name":"iron sulphate added","type":"exact"}],"termid":"FYECO:0000186"}


id: PBO:0080074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP37 pseudogene 1","termid":"PBO:0080074"}


id: PBO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 1","termid":"PBO:0070415"}


id: GO:0044576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic chemical reactions and pathways resulting in the breakdown of a pentose, any monosaccharide with a chain of five carbons, where one of the resulting products is ethanol.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to ethanol (obsolete GO:0044576)","synonyms":[{"name":"pentose catabolism to ethanol","type":"exact"}],"termid":"GO:0044576"}


id: GO:1902772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of phosphorelay signal transduction system that is involved in hydrogen peroxide mediated signaling pathway.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:18406331"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorelay signal transduction system involved in hydrogen peroxide mediated signaling pathway (obsolete GO:1902772)","synonyms":[{"name":"activation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"activation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"activation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"positive regulation of phosphorelay signal transduction system involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"positive regulation of phosphorelay signal transduction system involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"up regulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"up regulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"up regulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"}],"termid":"GO:1902772"}


id: PBO:0070793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 23","termid":"PBO:0070793"}


id: GO:0015482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete voltage-gated anion channel porin activity (obsolete GO:0015482)","synonyms":[{"name":"voltage-dependent anion channel porin activity","type":"exact"},{"name":"voltage-gated anion channel porin activity","type":"exact"}],"termid":"GO:0015482"}


id: PBO:0046904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member C","termid":"PBO:0046904"}


id: PBO:0054578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1980","termid":"PBO:0054578"}


id: GO:0099107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of an ion channel via direct interaction with it as part of G protein-coupled receptor signaling.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"ion channel regulator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099107"}


id: GO:0019719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Vesicular particles formed from disrupted endoplasmic reticulum and plasma membranes without any adhering ribosomes.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth microsome (obsolete GO:0019719)","synonyms":[{"name":"smooth microsome","type":"exact"}],"termid":"GO:0019719"}


id: PBO:0110233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral nuclear inner membrane protein Bqt4","termid":"PBO:0110233"}


id: PBO:0064263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing B2","termid":"PBO:0064263"}


id: GO:2000525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell costimulation","termid":"GO:2000523"},{"relation_name":"positively_regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell costimulation","synonyms":[{"name":"positive regulation of T cell co-stimulation","type":"exact"},{"name":"positive regulation of T lymphocyte costimulation","type":"exact"},{"name":"positive regulation of T-cell co-stimulation","type":"exact"},{"name":"positive regulation of T-cell costimulation","type":"exact"},{"name":"positive regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000525"}


id: PBO:0083759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential helicase component of heterohexameric MCM2-7 complexes; MCM2-7 complexes bind pre-replication complexes on DNA and melt DNA prior to replication; forms an Mcm4p-6p-7p subcomplex; shows nuclear accumulation in G1; homolog of S. pombe Cdc21p","termid":"PBO:0083759"}


id: PR:Q9USM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04489","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.10c","secondary_identifiers":["UniProtKB:Q9USM6"],"synonyms":[{"name":"Spom972h-CYB5A","type":"exact"}],"termid":"PR:Q9USM6"}


id: PBO:0083457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HSF1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0083457"}


id: GO:1990737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of endoplasmic reticulum stress caused by a manganese stimulus.","definition_xrefs":["PMID:23934647","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese-induced endoplasmic reticulum stress","synonyms":[{"name":"manganese-induced ER stress response","type":"exact"},{"name":"response to Mn-induced ER stress","type":"exact"},{"name":"response to manganese-induced ER stress","type":"exact"}],"termid":"GO:1990737"}


id: MOD:00625
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide derivatized residue","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:00625"}


id: GO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol = D-myo-inositol 1,2-cyclic phosphate + diacylglycerol.","definition_xrefs":["EC:4.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["RHEA:17093","MetaCyc:3.1.4.10-RXN"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase (1D-myo-inositol-1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol inositolphosphohydrolase (cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidylinositol phosphodiesterase activity","type":"exact"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"}],"termid":"GO:0004436"}


id: GO:0042703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclic, physiologic discharge through the vagina of blood and endometrial tissues from the nonpregnant uterus.","definition_xrefs":["PMID:8693059","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstruation","secondary_identifiers":["Wikipedia:Menstruation"],"termid":"GO:0042703"}


id: GO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A DNA repair process in which that does not require the exchange of genetic material between the broken DNA molecule and a homologous DNA region.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete non-recombinational repair (obsolete GO:0000726)","termid":"GO:0000726"}


id: PBO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase like","termid":"PBO:0042806"}


id: GO:0048013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by ephrin binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ephrin receptor signaling pathway","synonyms":[{"name":"Eph receptor signaling pathway","type":"exact"},{"name":"Eph receptor signalling pathway","type":"exact"}],"termid":"GO:0048013"}


id: GO:0045273
data:
  {"annotated_genes":["SJAG_03920","SJAG_02398","SJAG_00260","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112792,85287,84927,109237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005749"}]},"cv_name":"cellular_component","definition":"A part of the respiratory chain, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase complex (ubiquinone)","termid":"GO:0045257"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"respiratory chain complex II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"electron transport complex II","type":"related"}],"termid":"GO:0045273","terms_by_termid":{"GO:0005749":null}}


id: PBO:0083595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; almost completely overlaps YNL090W/RHO2 which encodes a small GTPase of the Rho/Rac subfamily of Ras-like proteins","termid":"PBO:0083595"}


id: GO:0009771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P680 chlorophylls on photosystem II donate an electron to a loosely bound acceptor molecule, the quinone Q, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["GOC:jid","ISBN:0716731363","ISBN:0816017360"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem II (obsolete GO:0009771)","termid":"GO:0009771"}


id: GO:0009183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate biosynthetic process","termid":"GO:0009136"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009183"}


id: PBO:0038308
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation","termid":"PBO:0038308"}


id: PBO:0055936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 42","termid":"PBO:0055936"}


id: PBO:0069963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1257, pseudogene","termid":"PBO:0069963"}


id: GO:1901457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to acetate","termid":"GO:1901457"}


id: PBO:0080619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 55","termid":"PBO:0080619"}


id: PBO:0054744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2153","termid":"PBO:0054744"}


id: GO:0036280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus. L-canavanine is L-homoserine substituted at oxygen with a guanidino (carbamimidamido) group.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to L-canavanine","termid":"GO:1901354"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-canavanine","termid":"GO:0036280"}


id: GO:0044163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that forms the internal framework of eukaryotic and prokaryotic host cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cytoskeleton","termid":"GO:0044163"}


id: PBO:0090885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, Clr6 complex subunit Prw1","termid":"PBO:0090885"}


id: GO:0005234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when glutamate is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"extracellularly glutamate-gated ion channel activity","synonyms":[{"name":"extracellular-glutamate-gated ion channel activity","type":"exact"}],"termid":"GO:0005234"}


id: GO:0050854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of antigen receptor-mediated signaling pathway","synonyms":[{"name":"regulation of antigen receptor mediated signalling pathway","type":"exact"}],"termid":"GO:0050854"}


id: PBO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to regulate endocytosis of plasma membrane proteins; regulates by recruiting the ubiquitin ligase Rsp5p to its target in the plasma membrane; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086098"}


id: GO:0003876
data:
  {"annotated_genes":["SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97867],"is_not":false,"summary":null,"term":"GO:0003876"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + H2O = IMP + NH3.","definition_xrefs":["EC:3.5.4.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"AMP deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14777","Reactome:R-HSA-76590","MetaCyc:AMP-DEAMINASE-RXN"],"synonyms":[{"name":"5-AMP deaminase activity","type":"related"},{"name":"5-adenylate deaminase activity","type":"related"},{"name":"5-adenylic acid deaminase activity","type":"related"},{"name":"AMP aminase activity","type":"related"},{"name":"AMP aminohydrolase activity","type":"related"},{"name":"adenosine 5-monophosphate deaminase activity","type":"related"},{"name":"adenosine 5-phosphate aminohydrolase activity","type":"related"},{"name":"adenosine monophosphate deaminase activity","type":"related"},{"name":"adenyl deaminase activity","type":"related"},{"name":"adenylate aminohydrolase activity","type":"related"},{"name":"adenylate deaminase activity","type":"related"},{"name":"adenylate deaminase reaction","type":"exact"},{"name":"adenylate desaminase activity","type":"related"},{"name":"adenylic acid deaminase activity","type":"related"},{"name":"adenylic deaminase activity","type":"related"},{"name":"myoadenylate deaminase activity","type":"narrow"}],"termid":"GO:0003876","terms_by_termid":{"GO:0003876":null}}


id: GO:0140357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"heme export from vacuole to cytoplasm","termid":"GO:0140357"}


id: GO:0140775
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88608],"is_not":false,"summary":null,"term":"GO:0140775"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament and promoting the dissociation of an actin filament branch.","definition_xrefs":["PMID:20362448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"actin filament debranching activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin debranching activity","type":"exact"}],"termid":"GO:0140775","terms_by_termid":{"GO:0140775":null}}


id: GO:0030023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A component of the extracellular matrix that enables the matrix to recoil after transient stretching.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"},{"relation_name":"is_a","term_name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix constituent conferring elasticity","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"},{"name":"elastin","type":"related"}],"termid":"GO:0030023"}


id: PBO:0072085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 15","termid":"PBO:0072085"}


id: GO:0006011
data:
  {"annotated_genes":["SJAG_01209","SJAG_02178","SJAG_01089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104948,110480,114495],"is_not":false,"summary":null,"term":"GO:0006011"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01209":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP-glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose metabolism","type":"exact"}],"termid":"GO:0006011","terms_by_termid":{"GO:0006011":null}}


id: PBO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC binding protein","termid":"PBO:0060244"}


id: GO:1990226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone methyltransferase enzyme.","definition_xrefs":["GOC:BHF","GOC:ame","PMID:19486527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"histone methyltransferase binding","termid":"GO:1990226"}


id: PBO:0088411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1","termid":"PBO:0088411"}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:25156118","PMID:23991286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: PBO:0079550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3","termid":"PBO:0079550"}


id: PBO:0046091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 2","termid":"PBO:0046091"}


id: PBO:0052119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 2","termid":"PBO:0052119"}


id: PBO:0079224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC3 antisense RNA 1","termid":"PBO:0079224"}


id: GO:0038074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of conjugation with cellular fusion (obsolete GO:0038074)","synonyms":[{"name":"MAPK phosphatase activity involved in regulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038074"}


id: PBO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 6","termid":"PBO:0043499"}


id: PBO:0012225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin","termid":"PBO:0012225"}


id: PBO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8B, pseudogene","termid":"PBO:0043758"}


id: PBO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8","termid":"PBO:0039625"}


id: PBO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-improper_part_of","termid":"PBO:0017408"}


id: GO:0090046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription regulator activity (obsolete GO:0090046)","synonyms":[{"name":"regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090046"}


id: GO:0030371
data:
  {"annotated_genes":["SJAG_01813","SJAG_02638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108202],"is_not":false,"summary":null,"term":"GO:0030371"},{"annotations":[114915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000900"}]},"cv_name":"molecular_function","definition":"Antagonizes ribosome-mediated translation of mRNA into a polypeptide.","definition_xrefs":["GOC:ai","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01813":null,"SJAG_02638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"translation repressor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030371","terms_by_termid":{"GO:0000900":null,"GO:0030371":null}}


id: GO:0102757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H2O = NADH + hydrogenphosphate.","definition_xrefs":["GOC:pz","RHEA:60664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"NADPH phosphatase activity","secondary_identifiers":["EC:3.1.3.108","MetaCyc:RXN-7703"],"termid":"GO:0102757"}


id: PBO:0058881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10397","termid":"PBO:0058881"}


id: RO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_with","termid":"RO:0002224"}


id: PR:O74767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10805:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.05","secondary_identifiers":["UniProtKB:O74767"],"synonyms":[{"name":"SPBC24C6.05","type":"related"},{"name":"Spom972h-COPE","type":"exact"},{"name":"epsilon-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"epsilon-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74767"}


id: FYPO:0003752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002403","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased total nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"increased level of bulk nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased level of total nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased nuclear bulk poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"increased total nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"increased total nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"},{"name":"total nuclear poly(A)+ mRNA accumulation","type":"related"},{"name":"total nuclear poly-A mRNA accumulation","type":"related"}],"termid":"FYPO:0003752"}


id: FYPO:0002890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is abnormal. The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiosis I","termid":"FYPO:0005651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal horsetail nucleus morphology","synonyms":[{"name":"abnormal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0002890"}


id: PBO:0027468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endocytosis","termid":"PBO:0027468"}


id: FYPO:0000550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pseudohyphal growth is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal pseudohyphal growth","secondary_identifiers":["FYPO:0000435"],"synonyms":[{"name":"abnormal filamentous growth","type":"broad"},{"name":"filamentous growth: abnormal","type":"broad"},{"name":"pseudohyphal growth: abnormal","type":"related"}],"termid":"FYPO:0000550"}


id: PBO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 33","termid":"PBO:0052665"}


id: PBO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 73","termid":"PBO:0052806"}


id: PBO:0111830
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQQ repeat","termid":"PBO:0111830"}


id: GO:0031694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-2A adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-2A adrenergic receptor binding","synonyms":[{"name":"alpha-2A adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031694"}


id: PBO:0068867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 107, pseudogene","termid":"PBO:0068867"}


id: GO:0006267
data:
  {"annotated_genes":["SJAG_02607","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99380,106607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the nuclear pre-replicative complex, a protein-DNA complex that forms at the eukaryotic DNA replication origin and is required for replication initiation.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0044085","GO:0006259","GO:0065003"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pre-replicative complex assembly","type":"exact"},{"name":"pre-RC complex assembly","type":"broad"},{"name":"pre-replicative complex assembly","type":"broad"},{"name":"pre-replicative complex formation","type":"broad"}],"termid":"GO:0006267","terms_by_termid":{"GO:1902985":null}}


id: PBO:0027079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane","termid":"PBO:0027079"}


id: PBO:0052281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 7A","termid":"PBO:0052281"}


id: GO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A trimeric protein complex which in E. coli is composed of the subunits MreB, MreC and MreD. The complex directs longitudinal cell wall synthesis, maintaining cell morphology.","definition_xrefs":["PMID:15612918","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome segregation-directing complex (obsolete GO:0043913)","synonyms":[{"name":"MreBCD complex","type":"narrow"},{"name":"chromosome segregation directing complex","type":"exact"},{"name":"longitudinal peptidoglycan synthesis-directing complex","type":"exact"}],"termid":"GO:0043913"}


id: PBO:0057970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689c","termid":"PBO:0057970"}


id: PBO:0091631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lactate dehydrogenase","termid":"PBO:0091631"}


id: PBO:0074221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 5","termid":"PBO:0074221"}


id: PBO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0000746"}


id: PBO:0039014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3 like matrix AAA peptidase subunit 2","termid":"PBO:0039014"}


id: PBO:0091639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular phospholipase","termid":"PBO:0091639"}


id: PBO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho2 (predicted)","termid":"PBO:0000525"}


id: PBO:0003607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF171 family protein","termid":"PBO:0003607"}


id: GO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apelin-like receptor (obsolete GO:0001597)","synonyms":[{"name":"APJ-like receptor","type":"exact"},{"name":"apelin-like receptor","type":"exact"}],"termid":"GO:0001597"}


id: GO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"D-xylose transmembrane transport","synonyms":[{"name":"D-xylose transport","type":"related"}],"termid":"GO:0015753"}


id: PATO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's density, firmness, or viscosity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consistency","synonyms":[{"name":"firmness","type":"related"}],"termid":"PATO:0000037"}


id: GO:0060513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial bud","termid":"GO:0060572"},{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostatic bud formation","synonyms":[{"name":"primary prostate bud formation","type":"exact"},{"name":"prostate ductal budding","type":"exact"},{"name":"prostate gland formation","type":"exact"}],"termid":"GO:0060513"}


id: PBO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family (predicted)","termid":"PBO:0004722"}


id: PBO:0041381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 2","termid":"PBO:0041381"}


id: GO:0031992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The biological transducer activity that accepts energy and converts it to another form, often by transfer to another molecule within the cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"energy transducer activity","synonyms":[{"name":"light harvesting activity","type":"related"},{"name":"photon capture","type":"related"}],"termid":"GO:0031992"}


id: PBO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0005555"}


id: PBO:0088564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh2","termid":"PBO:0088564"}


id: FYPO:0004609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more spindle pole bodies (SPBs) than normal during one or both meiotic nuclear divisions. In this phenotype, extra SPBs typically contain normal components but seldom attach to spindle microtubules.","definition_xrefs":["PMID:15569158","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"increased meiotic spindle pole body duplication","termid":"FYPO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000054"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during meiosis","synonyms":[{"name":"SPBs present in increased numbers during meiosis","type":"exact"},{"name":"excess meiotic spindle pole bodies present","type":"exact"},{"name":"excess spindle pole bodies present during meiosis","type":"exact"},{"name":"extra spindle pole bodies present during meiosis","type":"exact"},{"name":"pseudo-SPBs present during meiosis","type":"exact"},{"name":"spindle pole bodies present in greater numbers during meiosis","type":"exact"},{"name":"spindle pole bodies present in increased numbers during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004609"}


id: GO:0019614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound catabolic process","synonyms":[{"name":"catechol breakdown","type":"related"},{"name":"catechol catabolic process","type":"related"},{"name":"catechol catabolism","type":"related"},{"name":"catechol degradation","type":"related"}],"termid":"GO:0019614"}


id: PBO:0108982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 6","termid":"PBO:0108982"}


id: FYPO:0001814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) under iron starvation conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal cell population growth during iron starvation","synonyms":[{"name":"normal cell population growth during iron depletion","type":"exact"},{"name":"normal cell population growth during iron deprivation","type":"exact"},{"name":"normal growth during iron starvation","type":"broad"}],"termid":"FYPO:0001814"}


id: PBO:0049272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 alpha","termid":"PBO:0049272"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: GO:0061272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric connecting tubule over time, from its formation to the mature structure. The mesonephric connecting tubule is a tubular segment of the mesonephric nephron; it connects the distal tubule to the collecting duct in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric connecting tubule development","synonyms":[{"name":"mesonephric collecting tubule development","type":"exact"},{"name":"mesonephric connecting duct development","type":"related"}],"termid":"GO:0061272"}


id: GO:0100003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sodium ion transport.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by transcription from RNA polymerase II promoter (obsolete GO:0100003)","termid":"GO:0100003"}


id: PBO:0082921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c isoform 2, expressed under hypoxic conditions; also known as iso-2-cytochrome c; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration; protein abundance increases in response to DNA replication stress; CYC7 has a paralog, CYC1, that arose from the whole genome duplication","termid":"PBO:0082921"}


id: GO:1905244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of synaptic structure.","definition_xrefs":["PMID:25164660","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"modification of synaptic structure","termid":"GO:0099563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of synaptic structure","synonyms":[{"name":"regulation of synapse remodelling","type":"exact"}],"termid":"GO:1905244"}


id: PBO:0059516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded L-strand promoter","termid":"PBO:0059516"}


id: GO:0007602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons into a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phototransduction","secondary_identifiers":["Wikipedia:Visual_phototransduction"],"synonyms":[{"name":"opsin","type":"related"},{"name":"phototransduction, visible light, light adaptation","type":"narrow"},{"name":"phototrophin mediated phototransduction","type":"narrow"}],"termid":"GO:0007602"}


id: PBO:0071392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 15","termid":"PBO:0071392"}


id: RO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A is spatially_disjoint_from B if and only if they have no parts in common","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatially_disjoint_from","termid":"RO:0002163"}


id: SO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Lysidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysidine","secondary_identifiers":["http://en.wikipedia.org/wiki/Lysidine","RNAMOD:028"],"synonyms":[{"name":"k2C","type":"exact"}],"termid":"SO:0001289"}


id: GO:0035455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-alpha stimulus. Interferon-alpha is a type I interferon.","definition_xrefs":["PMID:11356686","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interferon-alpha","synonyms":[{"name":"response to interferon alfa-n1","type":"related"},{"name":"response to interferon alfa-n3","type":"related"},{"name":"response to leukocyte interferon","type":"exact"},{"name":"response to lymphoblast interferon","type":"exact"},{"name":"response to lymphoblastoid interferon","type":"exact"}],"termid":"GO:0035455"}


id: PBO:0066218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 23","termid":"PBO:0066218"}


id: PBO:0079452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUSC2 pseudogene 2","termid":"PBO:0079452"}


id: GO:0032485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Ral protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Ral protein signal transduction","termid":"GO:0032484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Ral protein signal transduction","termid":"GO:0032485"}


id: PBO:0075096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 145","termid":"PBO:0075096"}


id: PBO:0041282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF7 antisense RNA 1","termid":"PBO:0041282"}


id: GO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","synonyms":[{"name":"circulatory renin-angiotensin blood pressure regulation","type":"exact"},{"name":"circulatory renin-angiotensin control of blood pressure","type":"related"},{"name":"circulatory renin-angiotensin regulation of blood pressure","type":"exact"},{"name":"control of blood pressure by circulatory renin-angiotensin","type":"related"},{"name":"renin-angiotensin blood pressure control","type":"related"}],"termid":"GO:0001991"}


id: GO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus as part of sieve element differentiation. The nuclear contents are released and degraded in the cytoplasm at the same time as other organelles are rearranged and the cytosol is degraded.","definition_xrefs":["GOC:tb","PMID:25081480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"sieve element differentiation","termid":"GO:0090603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element enucleation","termid":"GO:0090602"}


id: PBO:0030493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coenzyme_Q10_absent_from_cell","termid":"PBO:0030493"}


id: GO:0051519
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85963,90649,91920],"is_not":false,"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that initiates the inactive process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of bipolar cell growth","termid":"GO:0051518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051519","terms_by_termid":{"GO:0051519":null}}


id: GO:0048515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid differentiation","synonyms":[{"name":"spermatid cell differentiation","type":"exact"}],"termid":"GO:0048515"}


id: PBO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing EndoNuclease","termid":"PBO:0016058"}


id: PBO:0068948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 192, pseudogene","termid":"PBO:0068948"}


id: PBO:0075278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 3","termid":"PBO:0075278"}


id: PBO:0068648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 29, pseudogene","termid":"PBO:0068648"}


id: PBO:0045258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 2, lysosomal","termid":"PBO:0045258"}


id: GO:0106190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to a decarboxylation reaction (obsolete GO:0106190)","secondary_identifiers":["EC:7.1.4.-"],"termid":"GO:0106190"}


id: PBO:0054335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1728","termid":"PBO:0054335"}


id: FYPO:0006594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which localization of the gamma-tubulin complex to the spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"normal gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"normal gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"normal gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"normal gamma-tubulin complex localization to spindle pole body during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006594"}


id: PBO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.48","termid":"PBO:0000910"}


id: GO:0055082
data:
  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homeostatic process involved in the maintenance of a steady state level of a chemical within a cell.","definition_xrefs":["GOC:jid","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"},{"relation_name":"is_a","term_name":"chemical 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chemical homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular chemical homeostasis","type":"exact"}],"termid":"GO:0055082","terms_by_termid":{"GO:0001678":null,"GO:0006808":null,"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006880":null,"GO:0006882":null,"GO:0007035":null,"GO:0009992":null,"GO:0010106":null,"GO:0010619":null,"GO:0010961":null,"GO:0019676":null,"GO:0019740":null,"GO:0030007":null,"GO:0030026":null,"GO:0030641":null,"GO:0030643":null,"GO:0032468":null,"GO:0033214":null,"GO:0033215":null,"GO:0051453":null,"GO:0090156":null,"GO:0090463":null,"GO:0090464":null,"GO:0090465":null}}


id: PBO:0112003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein Qcr6","termid":"PBO:0112003"}


id: PBO:0056660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 27","termid":"PBO:0056660"}


id: SO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA synthesized on a DNA or RNA template by an RNA polymerase.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"},{"relation_name":"overlaps","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript","secondary_identifiers":["http://en.wikipedia.org/wiki/RNA"],"synonyms":[{"name":"INSDC_feature:misc_RNA","type":"broad"}],"termid":"SO:0000673"}


id: GO:0097363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + [protein]-L-serine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine, or UDP-N-acetyl-D-glucosamine + [protein]-L-threonine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine.","definition_xrefs":["GOC:sart","GOC:jsg","PMID:22158438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"protein O-acetylglucosaminyltransferase activity","secondary_identifiers":["EC:2.4.1.255","Reactome:R-HSA-9687828"],"synonyms":[{"name":"O-GlcNAc transferase","type":"exact"},{"name":"O-linked N-acetylglucosaminyltransferase","type":"exact"},{"name":"OGTase","type":"exact"},{"name":"UDP-N-acetyl-D-glucosamine:protein-O-beta-N-acetyl-D-glucosaminyl transferase","type":"exact"},{"name":"protein O-GlcNAc transferase activity","type":"exact"}],"termid":"GO:0097363"}


id: GO:0098918
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of synapse","termid":"GO:0098918"}


id: GO:0032968
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  {"annotated_genes":["SJAG_01149","SJAG_03967","SJAG_03118","SJAG_01151","SJAG_00150","SJAG_03061","SJAG_02551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91881,99114,101400,102078,105081,111335,113028],"is_not":false,"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription, elongation","termid":"GO:0032786"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"positively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090040"],"synonyms":[{"name":"positive regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0032968","terms_by_termid":{"GO:0032968":null}}


id: GO:0160076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical inflammasome complex assembly.","definition_xrefs":["PMID:22002608","PMID:26375259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"negatively_regulates","term_name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-canonical inflammasome complex assembly","termid":"GO:0160076"}


id: MOD:01611
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks a cysteine and a histidine residue by forming the adduct 6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FMN.","definition_xrefs":["PubMed:17935335","RESID:AA0508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"flavin crosslinked residues","termid":"MOD:01621"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FMN","synonyms":[{"name":"6-((R)-2-amino-2-carboxyethyl)sulfanyl-8alpha-[4-((S)-2-amino-2-carboxyethyl)imidazol-3-yl]-riboflavin 5'-trihydrogen phosphate","type":"exact"},{"name":"6-(S-L-cysteinyl)-8alpha-(N3'-L-histidino)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(delta)-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(pi)-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N3'-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(pros-histidyl)-FMN","type":"exact"},{"name":"BINDING FMN (covalent; via 2 links)","type":"exact"},{"name":"BINDING FMN (covalent; via 2 links, pros nitrogen)","type":"exact"}],"termid":"MOD:01611"}


id: GO:0052162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation by symbiont of defense-related host calcium ion flux","secondary_identifiers":["GO:0052301"],"synonyms":[{"name":"modulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related host Ca2+ flux","type":"exact"}],"termid":"GO:0052162"}


id: PBO:0089876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein, implicated in vesicle-mediated transport","termid":"PBO:0089876"}


id: GO:2000905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"negatively_regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of starch metabolic process","synonyms":[{"name":"negative regulation of starch metabolism","type":"exact"}],"termid":"GO:2000905"}


id: FYPO:0001998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleoside diphosphate kinase activity","synonyms":[{"name":"reduced nucleoside diphosphate kinase activity","type":"exact"}],"termid":"FYPO:0001998"}


id: PBO:0061515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 5","termid":"PBO:0061515"}


id: GO:0015015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification, often by sulfation, of sugars incorporated into heparan sulfate after polymerization.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate proteoglycan metabolic process","termid":"GO:0030201"},{"relation_name":"part_of","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process, enzymatic modification","synonyms":[{"name":"heparan sulfate proteoglycan anabolism, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan formation, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process, enzymatic modification","type":"exact"},{"name":"heparin proteoglycan biosynthetic process, enzymatic modification","type":"related"}],"termid":"GO:0015015"}


id: PBO:0013446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4","termid":"PBO:0013446"}


id: MOD:01744
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01744"}


id: PBO:0040763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain enriched guanylate kinase associated","termid":"PBO:0040763"}


id: GO:0102671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-6a-hydroxymaackiain + S-adenosyl-L-methionine = H+ + (+)-pisatin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"6a-hydroxymaackiain-3-O-methyltransferase activity","secondary_identifiers":["RHEA:35471","MetaCyc:RXN-4002"],"termid":"GO:0102671"}


id: PBO:0079387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 2B class IIb pseudogene 1","termid":"PBO:0079387"}


id: GO:0099618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucuronate + NAD+ = UDP-beta-L-threo-pentapyranos-4-ulose + CO2 + NADH + H+.","definition_xrefs":["GOC:al","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-glucuronic acid dehydrogenase activity","secondary_identifiers":["EC:1.1.1.305","RHEA:24702"],"synonyms":[{"name":"UDP-GlcUA decarboxylase activity","type":"exact"}],"termid":"GO:0099618"}


id: PBO:0039797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3","termid":"PBO:0039797"}


id: PBO:0086518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; null mutant displays increased levels of spontaneous Rad52 foci","termid":"PBO:0086518"}


id: PBO:0043562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 1 chain","termid":"PBO:0043562"}


id: GO:0019711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptidyl-beta-carboxyaspartic acid from other compounds, including peptidyl-aspartic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-beta-carboxyaspartic acid biosynthetic process from peptidyl-aspartic acid","synonyms":[{"name":"peptidyl-beta-carboxyaspartic acid anabolism from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-beta-carboxyaspartic acid formation from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-beta-carboxyaspartic acid synthesis from peptidyl-aspartic acid","type":"exact"}],"termid":"GO:0019711"}


id: PBO:0049905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 6","termid":"PBO:0049905"}


id: PBO:0051117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-2 (pseudogene)","termid":"PBO:0051117"}


id: PBO:0058597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6729","termid":"PBO:0058597"}


id: GO:1904258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear dicing body.","definition_xrefs":["GOC:TermGenie","PMID:25902521","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nuclear dicing body assembly","synonyms":[{"name":"D body assembly","type":"exact"},{"name":"D body formation","type":"exact"},{"name":"nuclear dicing body formation","type":"exact"}],"termid":"GO:1904258"}


id: PATO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000247 proboscis extension reflex (obsolete PATO:0000247)","termid":"PATO:0000247"}


id: GO:0070801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conidiophore development","termid":"GO:0070795"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"positively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore stalk development","termid":"GO:0070801"}


id: GO:0090147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of mitochondria to the correct region of the cell that contributes to the process of mitochondrial fission.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of mitochondrion localization involved in mitochondrial fission (obsolete GO:0090147)","synonyms":[{"name":"regulation of establishment of mitochondrion localisation involved in mitochondrial fission","type":"exact"},{"name":"regulation of mitochondrial localization involved in mitochondrial fission","type":"related"}],"termid":"GO:0090147"}


id: PBO:0076437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 13","termid":"PBO:0076437"}


id: PBO:0054426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1822","termid":"PBO:0054426"}


id: PBO:0060603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit H","termid":"PBO:0060603"}


id: PBO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 13","termid":"PBO:0071875"}


id: GO:0007591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a chitin-based cuticle, which is then replaced by a new cuticle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, chitin-based cuticle","synonyms":[{"name":"chitin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0007591"}


id: GO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into inositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phosphorylation (obsolete GO:0052746)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0052746"}


id: PATO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light red","termid":"PATO:0001262"}


id: PBO:0081613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 541","termid":"PBO:0081613"}


id: PBO:0028456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_assembly","termid":"PBO:0028456"}


id: PBO:0089250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor, Noc1 related","termid":"PBO:0089250"}


id: PBO:0030316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_myristoyl-CoA_ligase_activity","termid":"PBO:0030316"}


id: PBO:0057947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-3","termid":"PBO:0057947"}


id: PBO:0049103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 160","termid":"PBO:0049103"}


id: PBO:0039942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID3B pseudogene 1","termid":"PBO:0039942"}


id: GO:0044750
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112040],"is_not":false,"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of nickel (Ni) cations from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044750","terms_by_termid":{"GO:0044750":null}}


id: GO:0032246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a pyrimidine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"regulates","term_name":"pyrimidine nucleoside transport","termid":"GO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of pyrimidine nucleoside transport","termid":"GO:0032246"}


id: SO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that donates the spliced leader to other mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mini_exon_donor_RNA","synonyms":[{"name":"mini exon donor RNA","type":"exact"},{"name":"mini-exon donor RNA","type":"exact"}],"termid":"SO:0000635"}


id: PBO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 33","termid":"PBO:0080068"}


id: FYPO:0006024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments is normal (i.e. indistinguishable from wild type). The relevant actin-binding protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal actin filament binding","synonyms":[{"name":"normal F-actin binding","type":"exact"},{"name":"normal filamentous actin binding","type":"exact"}],"termid":"FYPO:0006024"}


id: GO:0103079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthio-2-oxopentanoate + acetyl-CoA + H2O = H+ + 2-(3-methylthiopropyl)malate + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"2-(3'-methylthio)propylmalate synthase activity","secondary_identifiers":["RHEA:25605","MetaCyc:RXNQT-4163"],"termid":"GO:0103079"}


id: SO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including D-J-region with 5' UTR and 3' UTR, also designated as D-J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_gene_segment","synonyms":[{"name":"D-J-GENE","type":"exact"},{"name":"DJ gene","type":"exact"}],"termid":"SO:0000572"}


id: GO:0042879
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aldonate from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"aldonate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042879","terms_by_termid":{"GO:0015128":null}}


id: PBO:0079972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 10","termid":"PBO:0079972"}


id: PBO:0000669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine","termid":"PBO:0000669"}


id: PBO:0075903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4","termid":"PBO:0075903"}


id: GO:0043261
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma3 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-12 complex","synonyms":[{"name":"laminin-213 complex","type":"exact"}],"termid":"GO:0043261"}


id: PBO:0042773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 83","termid":"PBO:0042773"}


id: PBO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 7","termid":"PBO:0046565"}


id: PBO:0050374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 77","termid":"PBO:0050374"}


id: PBO:0082670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Dsl1p tethering complex; this complex interacts with ER SNAREs Sec20p and Use1p; mediates Sey1p-independent homotypic ER fusion; proposed to be involved in protein secretion; localizes to the ER and nuclear envelope","termid":"PBO:0082670"}


id: PBO:0029659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029659"}


id: GO:1903751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to hydrogen peroxide.","definition_xrefs":["GO_REF:0000058","PMID:18681888","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901299"},{"relation_name":"is_a","term_name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902176"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"down regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down-regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"downregulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"inhibition of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"negative regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:1903751"}


id: GO:0034247
data:
  {"annotated_genes":["SJAG_03112"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99081],"is_not":false,"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The process of removing sections of a primary snoRNA transcript to remove sequences not present in the mature form of the snoRNA and joining the remaining sections to form the mature form of the snoRNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03112":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"snoRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034247","terms_by_termid":{"GO:0034247":null}}


id: PATO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located more centrally than another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal to","termid":"PATO:0001195"}


id: PATO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased strength","synonyms":[{"name":"weak","type":"exact"}],"termid":"PATO:0001779"}


id: PBO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 114","termid":"PBO:0071112"}


id: FYPO:0002977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is increased during a cellular response to hydroxyurea.","definition_xrefs":["PMID:24006488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at MCB promoters during vegetative growth","termid":"FYPO:0006740"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during cellular response to hydroxyurea","termid":"FYPO:0007551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","synonyms":[{"name":"increased protein localisation to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein localization to chromatin at MCB promoters during cellular response to HU","type":"exact"},{"name":"increased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at MCB target genes during cellular response to hydroxyurea","type":"related"},{"name":"increased protein localization to chromatin at MCB-containing promoters during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002977"}


id: PBO:0073601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 2","termid":"PBO:0073601"}


id: GO:0006591
data:
  {"annotated_genes":["SJAG_03398","SJAG_01592","SJAG_00043","SJAG_01019","SJAG_01461","SJAG_04546","SJAG_00635","SJAG_00695","SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107212],"is_not":false,"summary":null,"term":"GO:0006591"},{"annotations":[98672,99504,94238,114391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[93421,109248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[94230,98674,107949,114393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"},{"annotations":[85004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03398":null,"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"ornithine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ornithine metabolism","type":"exact"}],"termid":"GO:0006591","terms_by_termid":{"GO:0006591":null,"GO:0006592":null,"GO:0019547":null,"GO:0033387":null,"GO:0042450":null}}


id: PBO:0028636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_fluphenazine","termid":"PBO:0028636"}


id: PBO:0003801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6 (predicted)","termid":"PBO:0003801"}


id: PBO:0081630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF559-ZNF177 readthrough","termid":"PBO:0081630"}


id: PBO:0036297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible membrane linking protein involved in beta-glucan biosynthesis (predicted)","termid":"PBO:0036297"}


id: FYPO:0003275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nitrite ions. Cells stop growing (and may die) at a concentration of nitrite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nitrite","synonyms":[{"name":"hypersensitive to nitrite","type":"exact"},{"name":"sensitive to nitrite during mitotic cell cycle","type":"related"},{"name":"sensitive to nitrite during vegetative growth","type":"exact"},{"name":"sensitive to nitrite ions","type":"exact"}],"termid":"FYPO:0003275"}


id: FYPO:0006683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at centromeric inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9me at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006683"}


id: PBO:0075980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 5A","termid":"PBO:0075980"}


id: PBO:0088282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar endopolyphosphatase","termid":"PBO:0088282"}


id: PBO:0060871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member C/D","termid":"PBO:0060871"}


id: GO:2000492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-18-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-18-mediated signaling pathway","termid":"GO:0035655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-18-mediated signaling pathway","synonyms":[{"name":"regulation of interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:2000492"}


id: GO:0097674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YLR352W in S. cerevisiae.","definition_xrefs":["GOC:jd","PMID:19882662","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-YLR352W ubiquitin ligase complex","termid":"GO:0097674"}


id: PBO:0004536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like (predicted)","termid":"PBO:0004536"}


id: GO:0075093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont signal transduction mediated by G-protein beta subunit (obsolete GO:0075093)","termid":"GO:0075093"}


id: GO:0062200
data:
  {"annotated_genes":["SJAG_00333","SJAG_00661","SJAG_03637","SJAG_00236","SJAG_04461","SJAG_00317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87219,96230,101392,108517,109094,114787],"is_not":false,"summary":null,"term":"GO:0062200"}]},"cv_name":"biological_process","definition":"An intracellular signaling cascade that starts with the activation of S. cerevisiae Kic1p, which activate Mob2p and Cbk1p. Cbk1p phosphorylates Ace2p, which results in its nuclear translocation, where it regulates transcription of genes involved in polarity and morphogenesis.","definition_xrefs":["PMID:21246752","PMID:23212898","PMID:16096637","PMID:22629372","PMID:15731009","PMID:20805322","PMID:20826805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00661":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"RAM/MOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MOR signaling pathway","type":"narrow"},{"name":"RAM signaling pathway","type":"narrow"},{"name":"RAM/MOR signaling pathway","type":"exact"},{"name":"morphogenesis Orb6 network","type":"exact"}],"termid":"GO:0062200","terms_by_termid":{"GO:0062200":null}}


id: GO:0000118
data:
  {"annotated_genes":["SJAG_04758","SJAG_02990","SJAG_03694","SJAG_03579","SJAG_04389","SJAG_02846","SJAG_02571","SJAG_02385","SJAG_02778","SJAG_04186","SJAG_00581","SJAG_02439","SJAG_03884","SJAG_04097","SJAG_03145","SJAG_03036","SJAG_01465","SJAG_04576","SJAG_03627","SJAG_02798","SJAG_03685","SJAG_04596","SJAG_04396","SJAG_01926","SJAG_05282","SJAG_00441","SJAG_03441","SJAG_00868","SJAG_03230","SJAG_01110","SJAG_00349","SJAG_02981","SJAG_01804","SJAG_05192","SJAG_03867","SJAG_02500","SJAG_03844","SJAG_04355","SJAG_03255","SJAG_03982","SJAG_01230","SJAG_00934","SJAG_02466"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92720],"is_not":false,"summary":null,"term":"GO:0000118"},{"annotations":[63899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070823"},{"annotations":[91520,106516,74758,85213,98832,77815,101057,105511,100755,110273,90712,99907,102785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033698"},{"annotations":[89293,110184,99908,93291,89258,102786,101058,90713,74759,105512,85214,91521,77816,98833,100756,106517,110274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070210"},{"annotations":[89849,91522,91958,105513,90376,85894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032221"},{"annotations":[89259,89294,100239,110185,93292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034967"},{"annotations":[104204,88143,109332,108145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[97024,95019,94306,109359,108282,113469,113288,110752,92721,109192,88442,84100,97742,105111,86785,103923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses histone deacetylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_00934":null,"SJAG_01110":null,"SJAG_01230":null,"SJAG_01465":null,"SJAG_01804":null,"SJAG_01926":null,"SJAG_02385":null,"SJAG_02439":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03579":null,"SJAG_03627":null,"SJAG_03685":null,"SJAG_03694":null,"SJAG_03844":null,"SJAG_03867":null,"SJAG_03884":null,"SJAG_03982":null,"SJAG_04097":null,"SJAG_04186":null,"SJAG_04355":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04758":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"histone deacetylase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"HDAC complex","type":"exact"}],"termid":"GO:0000118","terms_by_termid":{"GO:0000118":null,"GO:0000812":null,"GO:0032221":null,"GO:0033698":null,"GO:0034967":null,"GO:0070210":null,"GO:0070823":null,"GO:0070824":null}}


id: PBO:0047929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q23.3)","termid":"PBO:0047929"}


id: PBO:0078144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 23/delta variable 6","termid":"PBO:0078144"}


id: PBO:0081653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 578","termid":"PBO:0081653"}


id: PBO:0058360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4733","termid":"PBO:0058360"}


id: GO:0061766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the force with which blood travels through the lungs.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","PMID:22161164","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lung blood pressure","termid":"GO:0014916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung blood pressure","synonyms":[{"name":"positive regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0061766"}


id: FYPO:0001381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal protein kinase activity","termid":"FYPO:0001381"}


id: PATO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not exhibiting molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-adhesive","synonyms":[{"name":"non-resinous","type":"related"}],"termid":"PATO:0002332"}


id: SO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which, when transcribed, can be translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding","synonyms":[{"name":"protein-coding","type":"exact"}],"termid":"SO:0000010"}


id: GO:0015038
data:
  {"annotated_genes":["SJAG_04632","SJAG_00822","SJAG_01292","SJAG_01417","SJAG_01162","SJAG_02495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85508,94023,97664,103460,110783],"is_not":false,"summary":null,"term":"GO:0015038"},{"annotations":[101259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + electron acceptor = glutathione disulfide + electron donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00822":null,"SJAG_01162":null,"SJAG_01292":null,"SJAG_01417":null,"SJAG_02495":null,"SJAG_04632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0015036"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0015036"],"is_obsolete":false,"name":"glutathione disulfide oxidoreductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-111746"],"synonyms":[{"name":"glutaredoxin","type":"broad"},{"name":"glutathione disulphide oxidoreductase activity","type":"exact"},{"name":"glutathione oxidoreductase activity","type":"broad"}],"termid":"GO:0015038","terms_by_termid":{"GO:0004362":null,"GO:0015038":null}}


id: SO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary between an intron and an exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_junction","synonyms":[{"name":"splice boundary","type":"exact"},{"name":"splice junction","type":"exact"}],"termid":"SO:0001421"}


id: GO:0004749
data:
  {"annotated_genes":["SJAG_04970","SJAG_03811","SJAG_04882"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93787,105970,111002],"is_not":false,"summary":null,"term":"GO:0004749"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + 2 H+.","definition_xrefs":["RHEA:15609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ribose phosphate diphosphokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.6.1","KEGG_REACTION:R01049","MetaCyc:PWY0-662","Reactome:R-HSA-73580","Reactome:R-HSA-111215","MetaCyc:PRPPSYN-RXN"],"synonyms":[{"name":"5-phosphoribose pyrophosphorylase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate synthetase activity","type":"related"},{"name":"5-phosphoribosyl-alpha-1-pyrophosphate synthetase activity","type":"related"},{"name":"ATP:D-ribose-5-phosphate diphosphotransferase activity","type":"related"},{"name":"PP-ribose P synthetase activity","type":"related"},{"name":"PPRibP synthetase activity","type":"related"},{"name":"PRPP synthetase activity","type":"related"},{"name":"phosphoribosyl diphosphate synthetase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate synthetase activity","type":"related"},{"name":"phosphoribosyl-diphosphate synthetase activity","type":"related"},{"name":"phosphoribosylpyrophosphate synthase activity","type":"related"},{"name":"phosphoribosylpyrophosphate synthetase activity","type":"related"},{"name":"pyrophosphoribosylphosphate synthetase activity","type":"related"},{"name":"ribophosphate pyrophosphokinase activity","type":"related"},{"name":"ribose-5-phosphate pyrophosphokinase activity","type":"related"},{"name":"ribose-phosphate diphosphokinase activity","type":"related"},{"name":"ribose-phosphate pyrophosphokinase activity","type":"exact"}],"termid":"GO:0004749","terms_by_termid":{"GO:0004749":null}}


id: GO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte migration.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte migration","synonyms":[{"name":"regulation of immune cell migration","type":"exact"},{"name":"regulation of leucocyte migration","type":"exact"}],"termid":"GO:0002685"}


id: GO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that begins when material is taken up into plasma membrane caveolae, which then pinch off to form endocytic caveolar carriers.","definition_xrefs":["PMID:18498251","PMID:8970738","GOC:mah","PMID:17318224","PMID:9234965","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"caveolin-mediated endocytosis","synonyms":[{"name":"caveolae-dependent endocytosis","type":"exact"},{"name":"caveolae-mediated endocytosis","type":"exact"},{"name":"caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:0072584"}


id: PR:Q9P7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 51 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.09","synonyms":[{"name":"Spom972h-mug51","type":"exact"}],"termid":"PR:Q9P7Q6"}


id: GO:0102174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NADH + O2 = 4alpha-carboxy-4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol-4alpha-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11927","RHEA:58864"],"termid":"GO:0102174"}


id: PBO:0061672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 58","termid":"PBO:0061672"}


id: GO:0035636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information between living organisms.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism signaling (obsolete GO:0035636)","synonyms":[{"name":"multi-organism signalling","type":"exact"},{"name":"pheromone signaling","type":"narrow"},{"name":"signaling between organisms","type":"exact"},{"name":"signaling with other organism","type":"exact"}],"termid":"GO:0035636"}


id: PBO:0082913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome b; mitochondrially-encoded subunit of ubiquinol-cytochrome c reductase complex which includes Cobp, Rip1p, Cyt1p, Cor1p, Qcr2p, Qcr6p, Qcr7p, Qcr8p, Qcr9p, and Qcr10p; number of introns varies between strains from 0 to 6, with most having 5","termid":"PBO:0082913"}


id: GO:0008085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phototransduction, visible light, light adaptation (obsolete GO:0008085)","synonyms":[{"name":"phototransduction, visible light, light adaptation","type":"exact"}],"termid":"GO:0008085"}


id: GO:0044362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the function of proteins in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"modulation of molecular function in another organism","termid":"GO:0044359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of molecular function in another organism","synonyms":[{"name":"negative regulation of molecular function in other organism","type":"exact"}],"termid":"GO:0044362"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:23150719","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: GO:0051415
data:
  {"annotated_genes":["SJAG_07018","SJAG_01756","SJAG_02886","SJAG_02737","SJAG_00856","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96135,96437,97037,102481,112978,113211],"is_not":false,"summary":null,"term":"GO:0051415"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule by the interphase microtubule organizing center during interphase, the stage of cell cycle between successive rounds of chromosome segregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0065003","GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"microtubule nucleation by interphase microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMTOC-mediated microtubule nucleation during interphase","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organising centre","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organizing center","type":"exact"},{"name":"interphase microtubule organizing center-mediated microtubule nucleation during interphase","type":"exact"},{"name":"microtubule nucleation during interphase by IMTOC","type":"exact"},{"name":"microtubule nucleation during interphase by interphase microtubule organizing center","type":"exact"}],"termid":"GO:0051415","terms_by_termid":{"GO:0051415":null}}


id: GO:0030334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell migration.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"regulates","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration","termid":"GO:0030334"}


id: GO:0052179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host cell wall pectin (obsolete GO:0052179)","synonyms":[{"name":"metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052179"}


id: PR:Q10239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z-specific chaperone chz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.06c","synonyms":[{"name":"Spom972h-chz1","type":"exact"}],"termid":"PR:Q10239"}


id: GO:1990581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The rupture of the lysosomal membrane and loss of contents as a result of osmotic change, G-protein-driven disintegration, or unspecified cause.","definition_xrefs":["PMID:24472","PMID:9538255"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosome lysis (obsolete GO:1990581)","synonyms":[{"name":"lysosomal lysis","type":"exact"},{"name":"lysosome lysis","type":"exact"}],"termid":"GO:1990581"}


id: GO:0044463
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell projection, a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell projection part (obsolete GO:0044463)","termid":"GO:0044463"}


id: GO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland alveolus over time, from its formation to its mature state. The mammary gland alveolus is a sac-like structure that is found in the mature gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland lobule development","termid":"GO:0061377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland alveolus development","termid":"GO:0060749"}


id: PR:Q09922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F7.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1F7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.11c","synonyms":[{"name":"Spom972h-SPAC1F7.11c","type":"exact"}],"termid":"PR:Q09922"}


id: PBO:0091941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acid amide hydrolase","termid":"PBO:0091941"}


id: GO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell in response to an external stimulus.","definition_xrefs":["GOC:add","ISBN:0781735149","CL:0000451","PMID:15814331","PMID:16056255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"dendritic cell migration","termid":"GO:0036336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell chemotaxis","termid":"GO:0002407"}


id: PBO:0059009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane metalloendopeptidase","termid":"PBO:0059009"}


id: PBO:0082581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chorismate mutase; catalyzes the conversion of chorismate to prephenate to initiate the tyrosine/phenylalanine-specific branch of aromatic amino acid biosynthesis","termid":"PBO:0082581"}


id: PBO:0083750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress","termid":"PBO:0083750"}


id: GO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-13,14-dihydroretinol + A = all-trans-retinol + AH(2). Note that this reaction has only been observed to occur in the opposite direction.","definition_xrefs":["RHEA:19193","EC:1.3.99.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"all-trans-retinol 13,14-reductase activity","secondary_identifiers":["KEGG_REACTION:R07163","MetaCyc:1.3.99.23-RXN","Reactome:R-HSA-8956427"],"synonyms":[{"name":"(13,14)-all-trans-retinol saturase activity","type":"exact"},{"name":"RetSat activity","type":"related"},{"name":"all-trans-13,14-dihydroretinol:acceptor 13,14-oxidoreductase activity","type":"exact"},{"name":"all-trans-retinol:all-trans-13,14-dihydroretinol saturase activity","type":"exact"},{"name":"retinol saturase activity","type":"related"}],"termid":"GO:0051786"}


id: PBO:0076831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 2","termid":"PBO:0076831"}


id: GO:0070507
data:
  {"annotated_genes":["SJAG_00514","SJAG_00845","SJAG_04464","SJAG_02332","SJAG_02045","SJAG_00244","SJAG_01821","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99763,111088,111354],"is_not":false,"summary":null,"term":"GO:0070507"},{"annotations":[97902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[107473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[87464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[107057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[111089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[85972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based process","termid":"GO:0032886"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"regulates","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01821":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule cytoskeleton organisation","type":"exact"},{"name":"regulation of microtubule dynamics","type":"exact"}],"termid":"GO:0070507","terms_by_termid":{"GO:0031110":null,"GO:0031117":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: GO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of prostaglandin-endoperoxide synthase activity","termid":"GO:0060584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"positive regulation of (PG)H synthase activity","type":"related"},{"name":"positive regulation of PG synthetase activity","type":"related"},{"name":"positive regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"positive regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060585"}


id: GO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont causes the formation of a mass of cells in a host organism. While these growths are often called nodules, they are not formed as nitrogen-fixing structures, but rather to provide an environment for the symbiont to grow. In this sense they are parasitic structures rather than mutualistic.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction by symbiont of tumor or growth in host","secondary_identifiers":["GO:0051820","GO:0044005","GO:0044006"],"synonyms":[{"name":"induction by symbiont in host of tumor, nodule, or growth","type":"related"},{"name":"induction by symbiont in host of tumor, nodule, or growth containing transformed cells","type":"related"},{"name":"induction by symbiont of nodulation, tumor or growth in host","type":"related"},{"name":"induction of tumor, nodule, or growth containing transformed cells in other organism during symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth containing transformed cells in other organism involved in symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth in other organism during symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0051819"}


id: PBO:0073716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 3","termid":"PBO:0073716"}


id: GO:1904890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of excitatory synapse assembly.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"negatively_regulates","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of excitatory synapse assembly","synonyms":[{"name":"down regulation of excitatory synapse assembly","type":"exact"},{"name":"down regulation of excitatory synapse formation","type":"exact"},{"name":"down-regulation of excitatory synapse assembly","type":"exact"},{"name":"down-regulation of excitatory synapse formation","type":"exact"},{"name":"downregulation of excitatory synapse assembly","type":"exact"},{"name":"downregulation of excitatory synapse formation","type":"exact"},{"name":"inhibition of excitatory synapse assembly","type":"narrow"},{"name":"inhibition of excitatory synapse formation","type":"narrow"},{"name":"negative regulation of excitatory synapse formation","type":"exact"}],"termid":"GO:1904890"}


id: FYPO:0007970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a higher rate, or speed, than normal.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}


id: PBO:0081818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 11, Y-linked","termid":"PBO:0081818"}


id: PR:Q09680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5H10.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.12c","synonyms":[{"name":"Spom972h-SPAC5H10.12c","type":"exact"}],"termid":"PR:Q09680"}


id: PBO:0090771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex beta subunit Apl2","termid":"PBO:0090771"}


id: GO:0070556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIID complex that contains the TBP-associated factor TAF4B (also known as TAFII105 in human), a cell-type-specific variant of TAF4.","definition_xrefs":["PMID:8858156","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIID complex","termid":"GO:0005669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"TAF4B-containing transcription factor TFIID complex","synonyms":[{"name":"TFIID complex, B-cell specific","type":"related"}],"termid":"GO:0070556"}


id: PBO:0086299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in transcriptional silencing; required for normal transcription at several loci including HTA2-HTB2 and HHF2-HHT2, but not required at the other histone loci; binds with Spt10p to histone gene promoters during S phase; localizes to nuclear foci that become diffuse upon DNA replication stress","termid":"PBO:0086299"}


id: PBO:0055261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2688","termid":"PBO:0055261"}


id: GO:1990714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of galactose from UDP-galactose to hydroxyproline residues present in the peptide backbone.","definition_xrefs":["PMID:25600942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydroxyproline O-galactosyltransferase activity","synonyms":[{"name":"HPGT","type":"exact"}],"termid":"GO:1990714"}


id: PBO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.15.1.1","termid":"PBO:0000721"}


id: PBO:0075665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1","termid":"PBO:0075665"}


id: GO:0046548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"retinal rod cell differentiation","termid":"GO:0060221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell development","termid":"GO:0046548"}


id: GO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005733)","synonyms":[{"name":"small nucleolar RNA","type":"exact"},{"name":"snoRNA","type":"exact"}],"termid":"GO:0005733"}


id: PR:O14065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC962.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C962.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.01","synonyms":[{"name":"Spom972h-SPCC962.01","type":"exact"}],"termid":"PR:O14065"}


id: PBO:0058807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7849","termid":"PBO:0058807"}


id: PBO:0073643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 30, pseudogene","termid":"PBO:0073643"}


id: PBO:0085554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing a C-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization; protein abundance increases in response to DNA replication stress; LSB3 has a paralog, YSC84, that arose from the whole genome duplication","termid":"PBO:0085554"}


id: GO:0048824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a pigment cell precursor.","definition_xrefs":["GOC:dgh","PMID:16499899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell precursor differentiation","synonyms":[{"name":"chromatophore precursor differentiation","type":"exact"}],"termid":"GO:0048824"}


id: GO:0090268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of a mitotic cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"activation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090268"}


id: PBO:0041479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 80","termid":"PBO:0041479"}


id: PBO:0031876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin-associated protein Pds5","termid":"PBO:0031876"}


id: MOD:01696
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"alpha-amino acylated residue","termid":"MOD:01696"}


id: PBO:0089583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Ell1","termid":"PBO:0089583"}


id: PBO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1 mediated H3 K4 methylation is preferentially enriched at euchromatic loci","termid":"PBO:0005124"}


id: PBO:0051465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-20 (pseudogene)","termid":"PBO:0051465"}


id: PBO:0047568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 19","termid":"PBO:0047568"}


id: PBO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 14","termid":"PBO:0050312"}


id: PBO:0083294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene GLN4/YOR168W","termid":"PBO:0083294"}


id: GO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030442)","synonyms":[{"name":"inactivation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030442"}


id: PBO:0079297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"titin","termid":"PBO:0079297"}


id: GO:0019387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methanogenesis, from methanol","secondary_identifiers":["MetaCyc:METHFORM-PWY"],"synonyms":[{"name":"methane biosynthesis from methanol","type":"exact"},{"name":"methane biosynthetic process from methanol","type":"exact"}],"termid":"GO:0019387"}


id: PBO:0040949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 20","termid":"PBO:0040949"}


id: GO:0070984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SET domain of a protein. SET domains are named after three Drosophila proteins that contain this domain: Su(var), E(z) and trithorax. SET domains are associated with histone lysine methylation.","definition_xrefs":["Pfam:PF00856","PMID:12575990","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"SET domain binding","synonyms":[{"name":"SET binding","type":"exact"}],"termid":"GO:0070984"}


id: GO:0034254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"is_a","term_name":"regulation of urea metabolic process","termid":"GO:0034255"},{"relation_name":"regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0071941"],"is_obsolete":false,"name":"regulation of urea catabolic process","synonyms":[{"name":"regulation of urea breakdown","type":"exact"},{"name":"regulation of urea catabolism","type":"exact"},{"name":"regulation of urea degradation","type":"exact"}],"termid":"GO:0034254"}


id: FYPO:0005608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B occurs to a lower extent than normal in regions surrounding double-strand DNA breaks. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination during vegetative growth","termid":"FYPO:0002768"},{"relation_name":"is_a","term_name":"decreased histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H2B-K119 ubiquitination at double-strand break site during vegetative growth","synonyms":[{"name":"decreased histone H2B conserved C-terminal lysine ubiquitination at double-strand break site during vegetative growth","type":"exact"},{"name":"decreased histone H2B-K119 ubiquitination at DSB during vegetative growth","type":"exact"},{"name":"decreased histone H2B-K119 ubiquitination at double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased histone H2B-K119 ubiquitination at site of double-strand break during vegetative growth","type":"exact"},{"name":"reduced histone H2B-K119 ubiquitination at double-strand break during vegetative growth","type":"exact"}],"termid":"FYPO:0005608"}


id: RO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has end sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"is_subsequence_of","termid":"RO:0002525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_end_sequence_of","termid":"RO:0002519"}


id: PBO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0036357"}


id: GO:0035107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage morphogenesis","termid":"GO:0035107"}


id: PBO:0091410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1 Rpp101","termid":"PBO:0091410"}


id: PBO:0051207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-38-2","termid":"PBO:0051207"}


id: GO:1902167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902231"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902255"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"}],"termid":"GO:1902167"}


id: GO:0007569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An aging process that has as participant a cell after a cell has stopped dividing. Cell aging may occur when a cell has temporarily stopped dividing through cell cycle arrest (GO:0007050) or when a cell has permanently stopped dividing, in which case it is undergoing cellular senescence (GO:0090398). May precede cell death (GO:0008219) and succeed cell maturation (GO:0048469).","definition_xrefs":["GOC:PO_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell aging (obsolete GO:0007569)","synonyms":[{"name":"cell ageing","type":"exact"}],"termid":"GO:0007569"}


id: PBO:0053574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 595","termid":"PBO:0053574"}


id: PBO:0068314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 2","termid":"PBO:0068314"}


id: PBO:0041668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 1","termid":"PBO:0041668"}


id: PR:000085722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PomBase:VW","PMID:37459529","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me3(K36)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-37, MOD:00083","type":"narrow"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-37, MOD:00083","type":"narrow"},{"name":"hht3/Me3(K36)","type":"exact"}],"termid":"PR:000085722"}


id: GO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of tolerance induction which leads to immunological tolerance of a tumor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to tumor cell","termid":"GO:0002413"}


id: PBO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP4A pseudogene 1","termid":"PBO:0043031"}


id: PBO:0040997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 2","termid":"PBO:0040997"}


id: PATO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000280 backcross fertility (obsolete PATO:0000280)","termid":"PATO:0000280"}


id: PBO:0063141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 1","termid":"PBO:0063141"}


id: PBO:0082052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-->5' exonuclease and endonuclease with a possible role in apoptosis; has similarity to mammalian and C. elegans apoptotic nucleases","termid":"PBO:0082052"}


id: GO:0048217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The gel-like pectin matrix consists of the interlinked acidic and neutral pectin networks that are further cross-linked by calcium bridges. Pectins consist largely of long chains of mostly galacturonic acid units (typically 1,4 linkages and sometimes methyl esters). Three major pectic polysaccharides (homogalacturonan, rhamnogalacturonan I and rhamnogalacturonan II) are thought to occur in all primary cell walls.","definition_xrefs":["GOC:jid","PMID:11554482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"pectic matrix","termid":"GO:0048217"}


