# terms

id: MOD:00105
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine amide.","definition_xrefs":["RESID:AA0096","PubMed:743209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine amide","synonyms":[{"name":"(2S)-2-amino-3-hydroxypropanamide","type":"exact"},{"name":"L-serine amide","type":"exact"},{"name":"MOD_RES Serine amide","type":"exact"},{"name":"SerN","type":"exact"},{"name":"amidated L-serine","type":"exact"},{"name":"serinamide","type":"exact"}],"termid":"MOD:00105"}


id: FYPO:0007899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein to the actomyosin contractile ring is increased.","definition_xrefs":["PMID:34613787","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of protein localization to actomyosin contractile ring","synonyms":[{"name":"increased rate of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased rate of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased rate of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased rate of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased rate of protein localization to mitotic contractile ring","type":"exact"}],"termid":"FYPO:0007899"}


id: GO:1904796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of core promoter binding.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:22723415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of core promoter binding","termid":"GO:1904796"}


id: PBO:0070663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 34","termid":"PBO:0070663"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: GO:0008886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H2O + NADP+ = 3-phospho-D-glycerate + 2 H+ + NADPH.","definition_xrefs":["RHEA:14669","EC:1.2.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity","secondary_identifiers":["MetaCyc:1.2.1.9-RXN","KEGG_REACTION:R01058"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:NADP+ oxidoreductase activity","type":"exact"},{"name":"NADP-glyceraldehyde phosphate dehydrogenase","type":"broad"},{"name":"NADP-glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"dehydrogenase, glyceraldehyde phosphate (nicotinamide adenine dinucleotide phosphate)","type":"broad"},{"name":"glyceraldehyde 3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde phosphate dehydrogenase (NADP)","type":"broad"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde-3-phosphate:NADP reductase activity","type":"exact"},{"name":"nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"triosephosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0008886"}


id: PBO:0027278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_UV-damage_excision_repair_during_mitotic_G1_phase","termid":"PBO:0027278"}


id: FYPO:0009021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-cysteine as the nitrogen source.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0001985","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on cysteine nitrogen source","synonyms":[{"name":"decreased growth on cysteine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on cysteine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with cysteine nitrogen source","type":"related"},{"name":"reduced cell growth on cysteine nitrogen source","type":"related"},{"name":"slow cell growth on cysteine nitrogen source","type":"narrow"}],"termid":"FYPO:0009021"}


id: PBO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6","termid":"PBO:0075233"}


id: PBO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine cyclodeaminase family (predicted)","termid":"PBO:0001213"}


id: GO:0004930
data:
  {"annotated_genes":["SJAG_01978","SJAG_01699","SJAG_01345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[93121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[84265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["Wikipedia:GPCR","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-114558","GO:0001624","GO:0016526","GO:0001622","Reactome:R-HSA-167408","GO:0001623","GO:0001625","Reactome:R-HSA-114552"],"synonyms":[{"name":"orphan GPCR activity","type":"narrow"},{"name":"EBV-induced receptor","type":"narrow"},{"name":"Epstein-Barr Virus-induced receptor activity","type":"narrow"},{"name":"G protein coupled receptor activity","type":"exact"},{"name":"G protein linked receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity, unknown ligand","type":"narrow"},{"name":"G-protein linked receptor activity","type":"exact"},{"name":"GPCR activity","type":"exact"},{"name":"Mas proto-oncogene receptor activity","type":"narrow"},{"name":"RDC1 receptor activity","type":"narrow"},{"name":"SREB receptor","type":"narrow"},{"name":"ligand-dependent GPCR activity","type":"exact"},{"name":"orphan G protein coupled receptor activity","type":"narrow"},{"name":"orphan G-protein coupled receptor activity","type":"narrow"},{"name":"receptor activity, G-protein coupled","type":"exact"},{"name":"super conserved receptor expressed in brain receptor activity","type":"narrow"}],"termid":"GO:0004930","terms_by_termid":{"GO:0004932":null,"GO:0036320":null,"GO:1990576":null}}


id: PBO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc58","termid":"PBO:0000494"}


id: PBO:0065107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCA antisense RNA 1","termid":"PBO:0065107"}


id: PBO:0086155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-rRNA processing; also required for 40S ribosomal subunit assembly","termid":"PBO:0086155"}


id: PBO:0087966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the mitochondrial inner membrane that exports magnesium; involved in mitochondrial Mg2+ homeostasis; has similarity to human mitochondrial ATP-Mg/Pi carriers","termid":"PBO:0087966"}


id: GO:1903833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to amino acid starvation.","definition_xrefs":["GOC:TermGenie","PMID:25002487","PMID:7623840","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"},{"relation_name":"positively_regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to amino acid starvation","synonyms":[{"name":"activation of cellular response to amino acid starvation","type":"narrow"},{"name":"up regulation of cellular response to amino acid starvation","type":"exact"},{"name":"up-regulation of cellular response to amino acid starvation","type":"exact"},{"name":"upregulation of cellular response to amino acid starvation","type":"exact"}],"termid":"GO:1903833"}


id: PBO:0003636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5 (predicted)","termid":"PBO:0003636"}


id: PBO:0045841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 31","termid":"PBO:0045841"}


id: GO:1900203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spread of virus in host, cell to cell (obsolete GO:1900203)","synonyms":[{"name":"activation of cell to cell spread of virus within host","type":"exact"},{"name":"activation of spread of virus in host, cell to cell","type":"narrow"},{"name":"activation of spread of virus within host, cell to cell","type":"exact"},{"name":"activation of viral spread within host, cell to cell","type":"exact"},{"name":"positive regulation of cell to cell spread of virus within host","type":"exact"},{"name":"positive regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"positive regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"positive regulation of viral spread within host, cell to cell","type":"exact"},{"name":"up regulation of cell to cell spread of virus within host","type":"exact"},{"name":"up regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"up regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"up regulation of viral spread within host, cell to cell","type":"exact"},{"name":"up-regulation of cell to cell spread of virus within host","type":"exact"},{"name":"up-regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"up-regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"up-regulation of viral spread within host, cell to cell","type":"exact"},{"name":"upregulation of cell to cell spread of virus within host","type":"exact"},{"name":"upregulation of spread of virus in host, cell to cell","type":"exact"},{"name":"upregulation of spread of virus within host, cell to cell","type":"exact"},{"name":"upregulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900203"}


id: GO:0140939
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: S-adenosyl-L-methionine + a histone H4 = S-adenosyl-L-homocysteine + a methylated histone H4. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0003674","GO:0016741","GO:0008276"],"is_obsolete":false,"name":"histone H4 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5651654","Reactome:R-HSA-5423038","Reactome:R-HSA-5651657"],"synonyms":[{"name":"histone H4 methylase activity","type":"exact"},{"name":"histone H4 methylation","type":"exact"}],"termid":"GO:0140939","terms_by_termid":{"GO:0140943":null}}


id: FYPO:0003015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to salt stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during cellular response to salt stress","synonyms":[{"name":"cell lysis during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to salt stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to salt stress","type":"exact"},{"name":"lysed cell in response to salt stress","type":"exact"}],"termid":"FYPO:0003015"}


id: PBO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rhp51","termid":"PBO:0003697"}


id: GO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromosome involved in sex determination.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"sex chromosome","termid":"GO:0000803"}


id: GO:0045257
data:
  {"annotated_genes":["SJAG_03920","SJAG_01671","SJAG_00260","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84927,85287,109237,112792],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005749"}]},"cv_name":"cellular_component","definition":"The enzyme that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["ISBN:0198547684","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"succinate dehydrogenase complex","termid":"GO:0045281"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"succinate dehydrogenase complex (ubiquinone)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045257","terms_by_termid":{"GO:0005749":null}}


id: SO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the deletion, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_ablation","synonyms":[{"name":"feature ablation","type":"exact"}],"termid":"SO:0001879"}


id: GO:0140113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion of a set of components to form an extracellular microvesicule, a membrane-bounded vesicle that ranges in size 100 nm to 1 micron in size) and exits the cell by budding.","definition_xrefs":["PMID:28736435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle biogenesis","termid":"GO:0140112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extracellular microvesicle biogenesis","synonyms":[{"name":"extracellular microvesicle assembly","type":"related"}],"termid":"GO:0140113"}


id: GO:0009872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mechanism that functions to prevent self-fertilization in flowering plants that is determined by the diploid genotype of the parent plant. In sporophytic incompatibility the pollen does not germinate, consequently fertilization does not take place.","definition_xrefs":["ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete gametophytic self-incompatibility (obsolete GO:0009872)","synonyms":[{"name":"gametophytic self-incompatibility","type":"exact"}],"termid":"GO:0009872"}


id: GO:0072530
data:
  {"annotated_genes":["SJAG_03452","SJAG_00760","SJAG_03334","SJAG_00612","SJAG_02050","SJAG_03777","SJAG_04325","SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[108585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[108586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[62987,111187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[106939,98910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[111188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[88964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which a purine-containing compound is transported across a membrane. A purine-containing compound is any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03777":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"purine-containing compound transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine-containing compound membrane transport","type":"exact"}],"termid":"GO:0072530","terms_by_termid":{"GO:0035348":null,"GO:0098702":null,"GO:0098710":null,"GO:0140021":null,"GO:0140140":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PR:Q76PD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1223.01 gene.","definition_xrefs":["UniProtKB:Q76PD2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase hel2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.01","synonyms":[{"name":"Spom972h-SPCC1223.01","type":"exact"},{"name":"histone E3 ligase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q76PD2"}


id: PBO:0045755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme 2","termid":"PBO:0045755"}


id: PBO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 1","termid":"PBO:0043629"}


id: PBO:0004542
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sep2","termid":"PBO:0004542"}


id: GO:0070740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamate residues to the gamma-carboxyl group(s) of one or more specific glutamate residues on a tubulin molecule.","definition_xrefs":["GOC:mah","PMID:19524510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"tubulin-glutamic acid ligase activity","secondary_identifiers":["Reactome:R-HSA-8865774","Reactome:R-HSA-8955869","EC:6.3.2.61"],"synonyms":[{"name":"tubulin glutamylase activity","type":"exact"},{"name":"tubulin-glutamate ligase activity","type":"exact"}],"termid":"GO:0070740"}


id: PATO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000024 sporophytic compatability (obsolete PATO:0000024)","termid":"PATO:0000024"}


id: PATO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive toward","synonyms":[{"name":"sensitive","type":"exact"}],"termid":"PATO:0000516"}


id: PATO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile","termid":"PATO:0001362"}


id: PBO:0084864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria","termid":"PBO:0084864"}


id: RO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoparasite_of","synonyms":[{"name":"lives inside of","type":"related"}],"termid":"RO:0002634"}


id: GO:0061338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A heart process that modulates the propagation of the signal that causes the heart muscle to contract.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete atrioventricular node impulse conduction delay (obsolete GO:0061338)","synonyms":[{"name":"atrioventricular node impulse conduction delay","type":"exact"}],"termid":"GO:0061338"}


id: PBO:0070950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 5","termid":"PBO:0070950"}


id: PBO:0084638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mevalonate pyrophosphate decarboxylase; essential enzyme involved in the biosynthesis of isoprenoids and sterols, including ergosterol; acts as a homodimer","termid":"PBO:0084638"}


id: GO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the heteromeric enzymes, located in the mitochondrion, that act in the tricarboxylic acid (TCA) cycle.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tricarboxylic acid cycle enzyme complex (obsolete GO:0030062)","synonyms":[{"name":"TCA cycle enzyme complex","type":"broad"}],"termid":"GO:0030062"}


id: GO:0032214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via semi-conservative replication","termid":"GO:0032213"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via semi-conservative replication","synonyms":[{"name":"down regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"down-regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"downregulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"inhibition of telomere maintenance via semi-conservative replication","type":"narrow"}],"termid":"GO:0032214"}


id: GO:0033049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving clavulanic acid, (2R,3Z,5R)-3-(2-hydroxyethylidene)-7-oxo-4-oxa-1-azabicyclo[3.2.0]heptane-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"clavulanic acid metabolic process","synonyms":[{"name":"clavulanic acid metabolism","type":"exact"}],"termid":"GO:0033049"}


id: GO:0006496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal N-glycosylation (obsolete GO:0006496)","synonyms":[{"name":"protein amino acid terminal N-glycosylation","type":"exact"}],"termid":"GO:0006496"}


id: PBO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.8","termid":"PBO:0005637"}


id: PBO:0078174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-5","termid":"PBO:0078174"}


id: PBO:0017939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cactin, spliceosome complex subunit","termid":"PBO:0017939"}


id: GO:0070358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the controlled movement of a bacterial cell powered by the continuous polymerization of actin at one pole of the cell.","definition_xrefs":["GOC:mah","PMID:15773977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin polymerization-dependent cell motility","synonyms":[{"name":"cell motility by actin tail formation","type":"exact"}],"termid":"GO:0070358"}


id: PBO:0085385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane G protein coupled receptor (GPCR); interacts with the heterotrimeric G protein alpha subunit, Gpa2p, and with Plc1p; sensor that integrates nutritional signals with the modulation of cell fate via PKA and cAMP synthesis","termid":"PBO:0085385"}


id: PBO:0038638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 4","termid":"PBO:0038638"}


id: GO:0097264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["GOC:yaf","PMID:18676612","PMID:19144634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"self proteolysis","synonyms":[{"name":"autolysis","type":"broad"},{"name":"self-proteolysis","type":"exact"}],"termid":"GO:0097264"}


id: GO:0070421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III and XRCC1, and is involved in base excision repair.","definition_xrefs":["PMID:15141024","PMID:7760816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DNA ligase III-XRCC1 complex","termid":"GO:0070421"}


id: PBO:0066608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1","termid":"PBO:0066608"}


id: PBO:0085256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagy and CVT; required for cytoplasm-to-vacuole targeting (Cvt) pathway and efficient macroautophagy; cycles between the phagophore assembly site (PAS) and non-PAS locations; forms a complex with Atg9p and Atg27p","termid":"PBO:0085256"}


id: PBO:0004599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase Ppm1 (predicted)","termid":"PBO:0004599"}


id: PBO:0085965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the lethality caused by a rad53 null mutation","termid":"PBO:0085965"}


id: GO:0032800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor biosynthetic process (obsolete GO:0032800)","synonyms":[{"name":"receptor anabolism","type":"exact"},{"name":"receptor biosynthesis","type":"exact"},{"name":"receptor formation","type":"exact"},{"name":"receptor synthesis","type":"exact"}],"termid":"GO:0032800"}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["GOC:jl","PMID:11282471","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: GO:1901887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-hydroxybenzoyl-CoA.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"2-hydroxybenzoyl-CoA metabolic process","termid":"GO:1901885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA biosynthetic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA anabolism","type":"exact"},{"name":"2-hydroxybenzoyl-CoA biosynthesis","type":"exact"},{"name":"2-hydroxybenzoyl-CoA formation","type":"exact"},{"name":"2-hydroxybenzoyl-CoA synthesis","type":"exact"}],"termid":"GO:1901887"}


id: PBO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 3","termid":"PBO:0041903"}


id: PBO:0068335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 43","termid":"PBO:0068335"}


id: GO:0042933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"chrysobactin transmembrane transporter activity","synonyms":[{"name":"chrysobactin transporter activity","type":"related"}],"termid":"GO:0042933"}


id: GO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized vacuole of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally by the opening of contractile vacuole pores. One of its functions is osmoregulatory.","definition_xrefs":["GOC:jl","PMID:23890380","PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"contractile vacuole complex","termid":"GO:0062159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"contractile vacuole","secondary_identifiers":["Wikipedia:Contractile_vacuole"],"synonyms":[{"name":"central bladder","type":"related"},{"name":"central vacuole","type":"related"}],"termid":"GO:0000331"}


id: PBO:0048462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase I feedback regulator","termid":"PBO:0048462"}


id: GO:0106216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus.","definition_xrefs":["GOC:se","PMID:26195667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"positively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"positive regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106216"}


id: PBO:0074682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63D","termid":"PBO:0074682"}


id: PBO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F5 divergent transcript","termid":"PBO:0045722"}


id: GO:1903159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any malate transmembrane transporter activity that is involved in malate import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:TermGenie","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete malate transmembrane transporter activity involved in malate import into cell (obsolete GO:1903159)","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity involved in malate import into cell","type":"related"},{"name":"malate transmembrane transporter activity involved in malate import into cell","type":"exact"}],"termid":"GO:1903159"}


id: GO:0140461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The organization of chromatin into heterochromatin at the subtelomeric region of a chromosome.","definition_xrefs":["PMID:26744419"],"gene_count":0,"genotype_count":0,"name":"obsolete subtelomeric heterochromatin organization (obsolete GO:0140461)","termid":"GO:0140461"}


id: PBO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ras1","termid":"PBO:0001288"}


id: PBO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BH member 1 pseudogene","termid":"PBO:0062242"}


id: PBO:0013765
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vps38 was previously annotated as atg14","termid":"PBO:0013765"}


id: PR:P17609
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.07c","synonyms":[{"name":"SEC4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt2","type":"exact"}],"termid":"PR:P17609"}


id: PBO:0080485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5A","termid":"PBO:0080485"}


id: PATO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an object that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased object quality","termid":"PATO:0002303"}


id: GO:0008786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-allose-6-phosphate = D-allulose-6-phosphate.","definition_xrefs":["MetaCyc:RXN0-303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"D-allose 6-phosphate isomerase activity","secondary_identifiers":["RHEA:28430"],"synonyms":[{"name":"allose 6-phosphate isomerase activity","type":"narrow"}],"termid":"GO:0008786"}


id: PR:O14357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.11","synonyms":[{"name":"Spom972h-gpi1","type":"exact"}],"termid":"PR:O14357"}


id: GO:0010133
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103160,114014],"is_not":false,"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including glutamate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"proline catabolic process","termid":"GO:0006562"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"proline catabolic process to glutamate","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019494","MetaCyc:PROUT-PWY"],"synonyms":[{"name":"proline breakdown to glutamate","type":"exact"},{"name":"proline degradation to glutamate","type":"exact"},{"name":"proline oxidation","type":"related"}],"termid":"GO:0010133","terms_by_termid":{"GO:0010133":null}}


id: PBO:0069796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1082, pseudogene","termid":"PBO:0069796"}


id: PBO:0071226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 67","termid":"PBO:0071226"}


id: GO:0031493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a histone that is assembled into a nucleosome.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosomal histone binding (obsolete GO:0031493)","termid":"GO:0031493"}


id: PBO:0085818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and mCherry fusion proteins localize to the vacuole","termid":"PBO:0085818"}


id: PBO:0039521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 2","termid":"PBO:0039521"}


id: GO:0051516
data:
  {"annotated_genes":["SJAG_02169","SJAG_00514","SJAG_03581","SJAG_02392","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111087],"is_not":false,"summary":null,"term":"GO:0051516"},{"annotations":[85963,90649,91920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"regulates","term_name":"bipolar cell growth","termid":"GO:0042815"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051516","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0090094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit Rcf2","termid":"PBO:0090094"}


id: PBO:0109841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily G member 1","termid":"PBO:0109841"}


id: FYPO:0006877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that undergoes two or more rounds of cell division, but then lyses during cytokinesis and dies.","definition_xrefs":["PMID:30044717","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cell lysis during cytokinesis","termid":"FYPO:0003440"},{"relation_name":"is_a","term_name":"cell lysis during cytokinesis","termid":"FYPO:0003440"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, with abnormal septation","termid":"FYPO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, cell lysis during cytokinesis","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, cytolysis during cytokinesis","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, lysed cell during cytokinesis","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, cell lysis during cytokinesis","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, cell lysis during cytokinesis","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, cell lysis during cytokinesis","type":"exact"}],"termid":"FYPO:0006877"}


id: _global:required_for
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Indicates that a modification is required for a GO function or process.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required_for","termid":"_global:required_for"}


id: PR:Q9UTA1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- loz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C25B8.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.19c","synonyms":[{"name":"Spom972h-loz1","type":"exact"}],"termid":"PR:Q9UTA1"}


id: PBO:0036253
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROline requiring","termid":"PBO:0036253"}


id: FYPO:0006492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which chitin synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished chitin synthase activity","synonyms":[{"name":"chitin synthase activity abolished","type":"exact"}],"termid":"FYPO:0006492"}


id: PBO:0086468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial inner membrane transporter; proposed role in oleate metabolism and glutamate biosynthesis; member of the mitochondrial carrier (MCF) family; YMC2 has a paralog, YMC1, that arose from the whole genome duplication","termid":"PBO:0086468"}


id: GO:0019449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including hypotaurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process to hypotaurine","synonyms":[{"name":"L-cysteine breakdown to hypotaurine","type":"exact"},{"name":"L-cysteine degradation to hypotaurine","type":"exact"}],"termid":"GO:0019449"}


id: PR:Q9P7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPAP27G11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.14c","synonyms":[{"name":"Spom972h-SPAP27G11.14c","type":"exact"}],"termid":"PR:Q9P7M4"}


id: GO:0016148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.48"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity, termination (obsolete GO:0016148)","synonyms":[{"name":"protein-synthesizing GTPase activity, termination","type":"exact"}],"termid":"GO:0016148"}


id: GO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type VI secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VI secretion system (obsolete GO:0044049)","termid":"GO:0044049"}


id: GO:0004782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2.","definition_xrefs":["EC:4.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"sulfinoalanine decarboxylase activity","secondary_identifiers":["MetaCyc:SULFINOALANINE-DECARBOXYLASE-RXN","RHEA:16877","Reactome:R-HSA-1655443"],"synonyms":[{"name":"3-sulfino-L-alanine carboxy-lyase (hypotaurine-forming)","type":"related"},{"name":"3-sulfino-L-alanine carboxy-lyase activity","type":"related"},{"name":"CADCase/CSADCase activity","type":"related"},{"name":"CSAD","type":"related"},{"name":"CSADCase activity","type":"related"},{"name":"L-cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"cysteic decarboxylase activity","type":"related"},{"name":"cysteine-sulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"sulfoalanine decarboxylase activity","type":"related"},{"name":"sulphinoalanine decarboxylase activity","type":"exact"}],"termid":"GO:0004782"}


id: PBO:0109376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8B","termid":"PBO:0109376"}


id: PBO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036139"}


id: GO:0035767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:BHF","CL:0000115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis","termid":"GO:0035767"}


id: PBO:0090273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX dehydratase Nnr2","termid":"PBO:0090273"}


id: GO:1902664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23444136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"positive regulation of protein lipidation","termid":"GO:1903061"},{"relation_name":"positively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"activation of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902664"}


id: PBO:0051418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-14","termid":"PBO:0051418"}


id: SO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 120th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK120_acetylation_site","synonyms":[{"name":"H2BK120 acetylation site","type":"exact"},{"name":"H2BK120ac","type":"exact"}],"termid":"SO:0001940"}


id: PBO:0026665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026665"}


id: GO:2000601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:21454476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"positive regulation of actin nucleation","termid":"GO:0051127"},{"relation_name":"positively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"positive regulation of Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"positive regulation of actin filament branch nucleation","type":"exact"},{"name":"positive regulation of branched actin filament nucleation","type":"exact"}],"termid":"GO:2000601"}


id: FYPO:0006184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to osmotic stress measured in a cell differs from normal (i.e. is higher or lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of osmotic stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"abnormal level of osmotic stress responsive gene mRNA during vegetative growth","type":"exact"},{"name":"altered level of cellular response to osmotic stress responsive gene mRNA","type":"exact"},{"name":"altered level of osmotic stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"altered level of osmotic stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"altered level of osmotic stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"altered mRNA level of osmotic stress responsive genes during vegetative growth","type":"exact"},{"name":"altered osmotic stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006184"}


id: PBO:0090654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, Elf1 family","termid":"PBO:0090654"}


id: PBO:0056050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA upregulator of antiviral response interferon signaling","termid":"PBO:0056050"}


id: PBO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein destruction box","termid":"PBO:0001695"}


id: GO:0008807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-carboxyvinyl carboxyphosphonate = 3-(hydrohydroxyphosphoryl)pyruvate + CO2.","definition_xrefs":["EC:2.7.8.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016780"],"is_obsolete":false,"name":"carboxyvinyl-carboxyphosphonate phosphorylmutase activity","secondary_identifiers":["RHEA:14045","MetaCyc:2.7.8.23-RXN"],"synonyms":[{"name":"1-carboxyvinyl carboxyphosphonate phosphorylmutase (decarboxylating)","type":"related"},{"name":"CPEP phosphonomutase activity","type":"related"},{"name":"carboxyphosphonoenolpyruvate phosphonomutase activity","type":"related"}],"termid":"GO:0008807"}


id: FYPO:0000302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a cell's response to mating pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal response to pheromone","synonyms":[{"name":"abnormal response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"defective response to pheromone","type":"exact"}],"termid":"FYPO:0000302"}


id: FYPO:0009003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion does not occur, despite the nuclei and their SPBs coming together.","definition_xrefs":["PMID:36650056","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"abolished nuclear fusion with normal nuclear congression during mating","synonyms":[{"name":"nuclear congression without nuclear fusion","type":"exact"}],"termid":"FYPO:0009003"}


id: FYPO:0006033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during mitotic DNA replication.","definition_xrefs":["PMID:28481910","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin during mitotic DNA replication","synonyms":[{"name":"normal protein localisation to chromatin during mitotic DNA replication","type":"exact"},{"name":"normal protein localization to chromatin during DNA replication during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0006033"}


id: PBO:0082028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; involved with Gas2p in spore wall assembly; has similarity to Gas1p; localizes to the cell wall","termid":"PBO:0082028"}


id: PBO:0086068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that localizes to mitochondria; overexpression affects endocytic protein trafficking; YDR514C has a paralog, GFD2, that arose from the whole genome duplication","termid":"PBO:0086068"}


id: PBO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engrailed homeobox 2","termid":"PBO:0046302"}


id: PBO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 41","termid":"PBO:0044354"}


id: PBO:0026691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tamoxifen","termid":"PBO:0026691"}


id: GO:1990167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K27-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["PMID:23827681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K27-linked deubiquitination","termid":"GO:1990167"}


id: FYECO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amorolfine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amorolfine","synonyms":[{"name":"+ amorolfine","type":"exact"}],"termid":"FYECO:0000424"}


id: FYPO:0001124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has normal volume and dimensions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal vegetative cell size","synonyms":[{"name":"normal cell size during vegetative growth","type":"exact"},{"name":"normal vegetative cell length","type":"narrow"},{"name":"normal vegetative cell size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001124"}


id: PBO:0049507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 14","termid":"PBO:0049507"}


id: PBO:0078488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 7-2","termid":"PBO:0078488"}


id: FYPO:0005989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during conjugation with cellular fusion. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization during mating","synonyms":[{"name":"abnormal cellular protein localisation during mating","type":"exact"},{"name":"abnormal cellular protein localization during mating","type":"exact"},{"name":"abnormal protein localisation during mating","type":"exact"},{"name":"abnormal protein localization during conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0005989"}


id: PBO:0028602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_glucose_starvation","termid":"PBO:0028602"}


id: GO:0097270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The temporary recovery of response to a stimulus when a novel stimulus is added.","definition_xrefs":["GOC:kmv","PMID:11390637","Wikipedia:Habituation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dishabituation","termid":"GO:0097270"}


id: PBO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1","termid":"PBO:0045933"}


id: GO:0004650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.","definition_xrefs":["EC:3.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"polygalacturonase activity","secondary_identifiers":["MetaCyc:RXN-2103"],"synonyms":[{"name":"endo-D-galacturonase activity","type":"exact"},{"name":"endo-polygalacturonase activity","type":"exact"},{"name":"endogalacturonase activity","type":"exact"},{"name":"endopolygalacturonase activity","type":"exact"},{"name":"pectin depolymerase activity","type":"narrow"},{"name":"pectin hydrolase activity","type":"related"},{"name":"pectin polygalacturonase activity","type":"related"},{"name":"pectinase activity","type":"narrow"},{"name":"pectolase activity","type":"related"},{"name":"poly(1,4-alpha-D-galacturonide) glycanohydrolase activity","type":"exact"},{"name":"poly-alpha-1,4-galacturonide glycanohydrolase activity","type":"exact"}],"termid":"GO:0004650"}


id: PBO:0078438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 4-1","termid":"PBO:0078438"}


id: PBO:0053059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and SH3 protein 1","termid":"PBO:0053059"}


id: PBO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase Aap1","termid":"PBO:0002711"}


id: PBO:0034273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts","termid":"PBO:0034273"}


id: PR:Q09784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.05c","synonyms":[{"name":"Spom972h-trs33","type":"exact"}],"termid":"PR:Q09784"}


id: GO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the parts of the wing imaginal discs, giving rise to the adult thorax.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc fusion","termid":"GO:0046528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion, thorax closure","termid":"GO:0046529"}


id: GO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p.","definition_xrefs":["GOC:elh","PMID:16873066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hrd1p ubiquitin ligase complex","termid":"GO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005789","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase ERAD-M complex","termid":"GO:0000838"}


id: FYPO:0008040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in a cell is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4,5-bisphosphate level","synonyms":[{"name":"increased phosphatidylinositol-4,5-bisphosphate level in cell","type":"exact"}],"termid":"FYPO:0008040"}


id: MOD:01111
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a dimethoxybenzhydryl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethoxybenzhydryl modified residue","synonyms":[{"name":"4,4'-dimethoxybenzhydryl","type":"exact"},{"name":"Mbh","type":"exact"},{"name":"bis(4-methoxyphenyl)methyl","type":"exact"}],"termid":"MOD:01111"}


id: GO:0140951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl27-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me3.","definition_xrefs":["RHEA:60292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0016741","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 trimethyltransferase activity","secondary_identifiers":["EC:2.1.1.356"],"synonyms":[{"name":"histone H3-K27 trimethylase activity","type":"exact"},{"name":"histone H3-K27 trimethylation","type":"broad"},{"name":"histone H3K27 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140951"}


id: PBO:0048010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8","termid":"PBO:0048010"}


id: PBO:0069469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 735, pseudogene","termid":"PBO:0069469"}


id: PBO:0110379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 5","termid":"PBO:0110379"}


id: PBO:0088240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght2","termid":"PBO:0088240"}


id: PBO:0090044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4","termid":"PBO:0090044"}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: GO:0032083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of type IV restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032073"},{"relation_name":"is_a","term_name":"regulation of type IV site-specific deoxyribonuclease activity","termid":"GO:0032087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of type IV site-specific deoxyribonuclease activity","synonyms":[{"name":"down regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type IV restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type IV restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type IV restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032083"}


id: PBO:0029807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions","termid":"PBO:0029807"}


id: PBO:0084333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related antiparallel sliding motor protein; involved in mitotic spindle positioning; sliding activity promotes bipolar spindle assembly and maintenance of genome stability; inhibits spindle elongation, destabilizing late anaphase spindle microtubules that polymerize beyond the midzone","termid":"PBO:0084333"}


id: PBO:0091087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc3","termid":"PBO:0091087"}


id: SO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core RNA polymerase II promoter element with consensus (G/A)T(T/G/A)(T/A)(G/T)(T/G)(T/G).","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREd_motif","synonyms":[{"name":"BREd","type":"exact"},{"name":"BREd motif","type":"related"}],"termid":"SO:0001663"}


id: PBO:0038775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T3","termid":"PBO:0038775"}


id: PBO:0046758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOG pseudogene 1","termid":"PBO:0046758"}


id: PBO:0070218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 151 pseudogene","termid":"PBO:0070218"}


id: PBO:0028523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_acetylation","termid":"PBO:0028523"}


id: GO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The catalytic sector of the plasma membrane hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the plasma membrane when the entire ATP synthase is assembled. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane proton-transporting ATP synthase complex","termid":"GO:0045260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane proton-transporting ATP synthase complex, catalytic core F(1)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0045262"}


id: FYPO:0005581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains glycerophospholipids that have shorter fatty acid chain residues than normal.","definition_xrefs":["PomBase:mah","PMID:27053105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"short glycerophospholipids","synonyms":[{"name":"decreased glycerophospholipid fatty acid chain length","type":"exact"},{"name":"reduced glycerophospholipid fatty acid chain length","type":"exact"},{"name":"short glycerophospholipids during mitotic cell cycle","type":"related"},{"name":"short glycerophospholipids during vegetative growth","type":"exact"}],"termid":"FYPO:0005581"}


id: PBO:0062870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 6B","termid":"PBO:0062870"}


id: PBO:0024870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase","termid":"PBO:0024870"}


id: PBO:0054221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1602","termid":"PBO:0054221"}


id: PBO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 9, pseudogene","termid":"PBO:0044796"}


id: PBO:0044885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 11","termid":"PBO:0044885"}


id: PBO:0079796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A3 pseudogene 7","termid":"PBO:0079796"}


id: MOD:00914
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-phenylalanine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-phenylalanine residue","synonyms":[{"name":"ModPhe","type":"exact"}],"termid":"MOD:00914"}


id: PBO:0051656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 11","termid":"PBO:0051656"}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: GO:0099168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099168)","termid":"GO:0099168"}


id: PBO:0017770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nuf2","termid":"PBO:0017770"}


id: PBO:0015693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Dis2","termid":"PBO:0015693"}


id: FYPO:0002147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable. The population may be mixed with respect to other phenotypes (e.g. whether cell division occurs).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination (obsolete FYPO:0002147)","synonyms":[{"name":"cell population inviable after spore germination","type":"exact"},{"name":"inviable germinated spore population","type":"exact"},{"name":"population of inviable germinated spores","type":"exact"}],"termid":"FYPO:0002147"}


id: PBO:0031350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_at_low_temperature","termid":"PBO:0031350"}


id: PBO:0072163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 40","termid":"PBO:0072163"}


id: GO:0072268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the metanephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in metanephros development","synonyms":[{"name":"metanephros pattern formation","type":"related"},{"name":"metanephros pattern specification","type":"exact"},{"name":"pattern formation involved in metanephros development","type":"related"}],"termid":"GO:0072268"}


id: GO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune response","synonyms":[{"name":"activation of adaptive immune response","type":"narrow"},{"name":"stimulation of adaptive immune response","type":"narrow"},{"name":"up regulation of adaptive immune response","type":"exact"},{"name":"up-regulation of adaptive immune response","type":"exact"},{"name":"upregulation of adaptive immune response","type":"exact"}],"termid":"GO:0002821"}


id: PBO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 71","termid":"PBO:0071069"}


id: PBO:0057965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3686","termid":"PBO:0057965"}


id: GO:0060368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the Fc receptor mediated stimulatory signaling pathway..","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"regulation of Fc receptor mediated stimulatory signalling pathway","type":"exact"}],"termid":"GO:0060368"}


id: GO:0014845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the body of stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","MA:0002559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal stomach smooth muscle contraction","termid":"GO:0014828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach body smooth muscle contraction","termid":"GO:0014845"}


id: PBO:0055539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2975","termid":"PBO:0055539"}


id: PR:Q7Z9I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.05","synonyms":[{"name":"Spom972h-wtf7","type":"exact"}],"termid":"PR:Q7Z9I5"}


id: PBO:0085037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of the NatC N-terminal acetyltransferase; required for replication of dsRNA virus; expression is glucose-repressible; human NatC ortholog, Naa35, requires co-expression of the human catalytic subunit, Naa30, to functionally complement the null allele","termid":"PBO:0085037"}


id: GO:0030778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + columbamine = S-adenosyl-L-homocysteine + H+ + palmatine.","definition_xrefs":["RHEA:15373","EC:2.1.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"columbamine O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.118-RXN","KEGG_REACTION:R03721"],"synonyms":[{"name":"S-adenosyl-L-methionine:columbamine O-methyltransferase activity","type":"related"}],"termid":"GO:0030778"}


id: PBO:0066316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein, mRNA processing factor 2","termid":"PBO:0066316"}


id: SO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified inosine is an inosine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine","termid":"SO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_inosine","synonyms":[{"name":"modified inosine","type":"exact"}],"termid":"SO:0001274"}


id: PBO:0040364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 1","termid":"PBO:0040364"}


id: PBO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHHADH antisense RNA 1","termid":"PBO:0045982"}


id: GO:0097636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:autophagy","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of autophagosome membrane (obsolete GO:0097636)","synonyms":[{"name":"intrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"intrinsic to autophagic vacuole membrane","type":"narrow"}],"termid":"GO:0097636"}


id: PBO:0084540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; ERP4 has a paralog, ERP2, that arose from the whole genome duplication","termid":"PBO:0084540"}


id: PBO:0038673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL6 antisense RNA 1","termid":"PBO:0038673"}


id: GO:0048690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon extension involved in regeneration.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"}


id: FYPO:0000827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or more cell cycle phase transitions begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"premature cell cycle phase transition","synonyms":[{"name":"advanced cell cycle phase transition","type":"exact"},{"name":"premature cell cycle phase transition during mitotic cell cycle","type":"related"},{"name":"premature cell cycle phase transition during vegetative growth","type":"exact"},{"name":"premature cell cycle progression","type":"exact"},{"name":"premature cell cycle progression during vegetative growth","type":"exact"}],"termid":"FYPO:0000827"}


id: PBO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase (predicted)","termid":"PBO:0004290"}


id: PR:P36606
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sod2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Na(+)/H(+) antiporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.10","synonyms":[{"name":"Spom972h-sod2","type":"exact"}],"termid":"PR:P36606"}


id: PBO:0061409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPTN intronic transcript 1","termid":"PBO:0061409"}


id: GO:0016037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reception of a photon by a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"light absorption","synonyms":[{"name":"absorption of light","type":"exact"}],"termid":"GO:0016037"}


id: PBO:0052249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 18","termid":"PBO:0052249"}


id: PBO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by glucose","termid":"PBO:0001103"}


id: PBO:0045250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C30","termid":"PBO:0045250"}


id: GO:1905543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-15 (IL-15) and that consists of, at a minimum, an interleukin, an alpha, beta and gamma chain as well as optional additional kinase subunits. The alpha chain is unique to binds IL-15 while it shares the beta chain with the IL-2 receptor and the cytokine receptor common gamma chain with multiple interleukin receptors.","definition_xrefs":["PMID:23104097","GOC:bhm","GOC:TermGenie","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-15 receptor complex","synonyms":[{"name":"IL-15 receptor complex","type":"exact"},{"name":"IL-15-receptor complex","type":"exact"},{"name":"IL15 receptor complex","type":"exact"},{"name":"IL15-receptor complex","type":"exact"},{"name":"interleukin-15-receptor complex","type":"exact"}],"termid":"GO:1905543"}


id: PBO:0027496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mevastatin","termid":"PBO:0027496"}


id: GO:0016791
data:
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id: GO:0047487
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id: MOD:00603
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id: SO:0000677
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id: GO:1904543
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id: PBO:0055486
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id: PBO:0046622
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id: PBO:0078953
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id: GO:0005971
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id: GO:1901771
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id: GO:1990723
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id: PBO:0080484
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id: GO:0002949
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  {"annotated_genes":["SJAG_00865","SJAG_04201","SJAG_04700","SJAG_02863","SJAG_06560","SJAG_00378","SJAG_04182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94353,95511,97189,100197,112359],"is_not":false,"summary":null,"term":"GO:0002949"},{"annotations":[110283,114622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["PMID:23258706","PMID:19287007","GOC:mah","GOC:imk","PMID:21183954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_00865":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070526"],"synonyms":[{"name":"t6A biosynthesis","type":"exact"},{"name":"t6A biosynthetic process","type":"exact"},{"name":"t6A tRNA modification","type":"exact"},{"name":"threonylcarbamoyladenosine anabolism","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthesis","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthetic process","type":"exact"},{"name":"threonylcarbamoyladenosine formation","type":"exact"},{"name":"threonylcarbamoyladenosine synthesis","type":"exact"}],"termid":"GO:0002949","terms_by_termid":{"GO:0002949":null,"GO:0072670":null}}


id: GO:0061477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aromatase inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to aromatase inhibitor","termid":"GO:0061477"}


id: PBO:0004019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase catalytic subunit Bgs1","termid":"PBO:0004019"}


id: GO:1901778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentalenolactone.","definition_xrefs":["GOC:yaf","PMID:17178094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone metabolic process","synonyms":[{"name":"pentalenolactone metabolism","type":"exact"}],"termid":"GO:1901778"}


id: PBO:0086744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possibly involved in zinc homeostasis; Bdf1p-dependent transcription induced by salt stress; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086744"}


id: GO:2000742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior head development","termid":"GO:2000742"}


id: GO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which an oenocyte splits off of an existing epithelial sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"oenocyte delamination","termid":"GO:0060233"}


id: PBO:0058541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6086","termid":"PBO:0058541"}


id: PBO:0089608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Sqt1","termid":"PBO:0089608"}


id: PBO:0082082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribulose-1-phosphate dehydratase; acts in the methionine salvage pathway; potential Smt3p sumoylation substrate; expression downregulated by caspofungin and deletion mutant is caspofungin resistant","termid":"PBO:0082082"}


id: PBO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase (predicted)","termid":"PBO:0003006"}


id: PBO:0063235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha cluster, complex locus","termid":"PBO:0063235"}


id: PR:Q09695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psr1 gene.","definition_xrefs":["UniProtKB:Q09695","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.02c","synonyms":[{"name":"Spom972h-psr1","type":"exact"}],"termid":"PR:Q09695"}


id: PBO:0054348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1741","termid":"PBO:0054348"}


id: PBO:0031716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_genome_maintenance","termid":"PBO:0031716"}


id: GO:0006302
data:
  {"annotated_genes":["SJAG_03855","SJAG_00441","SJAG_02527","SJAG_04142","SJAG_00327","SJAG_01762","SJAG_05237","SJAG_03026","SJAG_01173","SJAG_00475","SJAG_04039","SJAG_00640","SJAG_03722","SJAG_01624","SJAG_02267","SJAG_02575","SJAG_05373","SJAG_03941","SJAG_04199","SJAG_00980","SJAG_01873","SJAG_02822","SJAG_01677","SJAG_02348","SJAG_01573","SJAG_00213","SJAG_02339","SJAG_02616","SJAG_03720","SJAG_02079","SJAG_02556","SJAG_01205","SJAG_03702","SJAG_00796","SJAG_01698","SJAG_00857","SJAG_01652","SJAG_02237","SJAG_02545","SJAG_03926","SJAG_04971","SJAG_01076","SJAG_03221","SJAG_04210","SJAG_05323","SJAG_01832","SJAG_01067","SJAG_03942","SJAG_02465","SJAG_03417","SJAG_01776","SJAG_01332","SJAG_01354","SJAG_00696","SJAG_03160","SJAG_03994","SJAG_05232","SJAG_02460","SJAG_05180","SJAG_00623","SJAG_04147","SJAG_03454","SJAG_04843","SJAG_05372","SJAG_05295","SJAG_04530","SJAG_04932","SJAG_00884","SJAG_04183","SJAG_02690","SJAG_00757","SJAG_00177","SJAG_00153","SJAG_01708","SJAG_04995","SJAG_00805","SJAG_02294","SJAG_01611","SJAG_03436","SJAG_05105","SJAG_04372","SJAG_00935","SJAG_03898","SJAG_16460","SJAG_03048","SJAG_02708","SJAG_02837","SJAG_01044","SJAG_00823","SJAG_02828","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78262,84163,84659,87858,95199,97570,107259,107526,107766,111776,112274,112365,112900,113126,113317,113719],"is_not":false,"summary":null,"term":"GO:0006302"},{"annotations":[84658,92085,103796,107764,112833,85266],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000729"},{"annotations":[88736,103706,92243,95113,98246,96593,106340],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[112834,103709,84660,95116,85267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990918"},{"annotations":[109527,102457,86534,111316,88032,95477,107942,95336,106265,111145,108072,103289,113127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000727"},{"annotations":[112366,109940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[113262,85161,103710,85852,99255,112294,95429,101770,103448,96658,88593,100206,92244,107527,113875,114759,113602,86300,84164,97220,105128,93171,102336,106343,84513,107283,88738,113732,92756,92990,99923,111558,86956,92375,95117,102458,92086,107767,113128,98247,85268,112835,84661,69781,102988,103797,89304,95360,107588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000724"},{"annotations":[107768,85269,106987,95985,112367,91949,110323,112836,84662,101059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006303"},{"annotations":[92245,98248,106864,114760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045002"},{"annotations":[114761],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000736"},{"annotations":[113463,96693,85394,88712,104193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045003"},{"annotations":[91951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[86385,103799,112838],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000706"},{"annotations":[92991],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[103711,106346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[96694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"},{"annotations":[84664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097552"},{"annotations":[98422],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[103450],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001034"},{"annotations":[87001],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000779"},{"annotations":[105367],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010569"},{"annotations":[86152,112904,74168,92311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990414"}]},"cv_name":"biological_process","definition":"The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA 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break repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006302","terms_by_termid":{"GO:0000706":null,"GO:0000707":null,"GO:0000724":null,"GO:0000727":null,"GO:0000729":null,"GO:0000730":null,"GO:0000736":null,"GO:0006302":null,"GO:0006303":null,"GO:0010569":null,"GO:0010772":null,"GO:0045002":null,"GO:0045003":null,"GO:0061674":null,"GO:0097552":null,"GO:0097680":null,"GO:1902346":null,"GO:1990414":null,"GO:1990918":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0053497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 475","termid":"PBO:0053497"}


id: FYPO:0009112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which flocculation does not occur in conditions where wild-type cells floculate. Flocculation is the non-sexual aggregation of cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished flocculation during vegetative growth","termid":"FYPO:0009112"}


id: GO:0043726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-6-(5-phospho-D-ribitylamino)uracil + H2O = 5-amino-6-(D-ribitylamino)uracil + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity","secondary_identifiers":["MetaCyc:RIBOPHOSPHAT-RXN","GO:0019173","RHEA:25197","EC:3.1.3.104"],"synonyms":[{"name":"pyrimidine phosphatase activity","type":"exact"}],"termid":"GO:0043726"}


id: GO:0043669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer part of the exine, which stains positively with basic fuchsin in optical microscopy and has higher electron density in conventionally prepared TEM sections.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ectexine","termid":"GO:0043669"}


id: PBO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member C","termid":"PBO:0047070"}


id: GO:1904424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GTP binding.","definition_xrefs":["GO_REF:0000059","PMID:21454546","GOC:TermGenie","PMID:19066305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of GTP binding","termid":"GO:1904424"}


id: PBO:0052189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 2","termid":"PBO:0052189"}


id: PBO:0090477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine N5 monooxygenase","termid":"PBO:0090477"}


id: PBO:0075432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANXA2 overlapping transcript 1","termid":"PBO:0075432"}


id: PBO:0075729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9","termid":"PBO:0075729"}


id: GO:0043243
data:
  {"annotated_genes":["SJAG_03126","SJAG_02433","SJAG_02812","SJAG_04312","SJAG_02189","SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[97902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[108003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[65678,90876,67527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02433":null,"SJAG_02812":null,"SJAG_03126":null,"SJAG_04312":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-containing complex disassembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex disassembly","type":"narrow"},{"name":"positive regulation of protein complex disassembly","type":"related"},{"name":"stimulation of protein complex disassembly","type":"narrow"},{"name":"up regulation of protein complex disassembly","type":"exact"},{"name":"up-regulation of protein complex disassembly","type":"exact"},{"name":"upregulation of protein complex disassembly","type":"exact"}],"termid":"GO:0043243","terms_by_termid":{"GO:0031117":null,"GO:0045905":null,"GO:1901098":null,"GO:1904595":null}}


id: PBO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Sty1","termid":"PBO:0000204"}


id: GO:0035178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fine-tuning the spatial position of an organism in response to variability in their environment. For example, reorientation of an organism in the direction of a food source.","definition_xrefs":["PMID:10880478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"turning behavior","synonyms":[{"name":"turning behaviour","type":"exact"}],"termid":"GO:0035178"}


id: GO:0016926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:jl","PMID:11265250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein desumoylation","secondary_identifiers":["GO:0016928"],"synonyms":[{"name":"desumoylation","type":"exact"},{"name":"protein desumolation","type":"exact"}],"termid":"GO:0016926"}


id: PBO:0041059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9 pseudogene 1","termid":"PBO:0041059"}


id: PATO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000362 direction value (obsolete PATO:0000362)","termid":"PATO:0000362"}


id: PBO:0005058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDT malic acid transporter (predicted)","termid":"PBO:0005058"}


id: GO:0120319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl long-chain fatty acid + O2 + reduced [NADPH-hemoprotein reductase] = an (omega-1)-hydroxy-long-chain fatty acid + H+ + H2O + oxidized [NADPH-hemoprotein reductase. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:18577768","GOC:nhn","PMID:24242247","RHEA:60936","PMID:22772592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-1 hydroxylase activity","termid":"GO:0120502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acid omega-1 hydroxylase activity","synonyms":[{"name":"cytochrome P450 fatty acid omega-1 hydroxylase activity","type":"related"}],"termid":"GO:0120319"}


id: GO:0045040
data:
  {"annotated_genes":["SJAG_03502","SJAG_02797","SJAG_03416","SJAG_01780","SJAG_02355","SJAG_01951","SJAG_02034","SJAG_02361","SJAG_00569"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86468,86995,94303,94648,103615,106092,106442,106452,107835],"is_not":false,"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"The process comprising the insertion of proteins from outside the organelle into the mitochondrial outer membrane, mediated by large outer membrane translocase complexes.","definition_xrefs":["GOC:mcc","GOC:vw","PMID:18672008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_01780":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02797":null,"SJAG_03416":null,"SJAG_03502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0007005","GO:0006605","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"protein insertion into mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial outer membrane protein import","type":"exact"},{"name":"protein import into mitochondrial outer membrane","type":"exact"},{"name":"protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:0045040","terms_by_termid":{"GO:0045040":null}}


id: GO:0090567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a reproductive shoot system over time, from its formation to the mature structure.","definition_xrefs":["GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive shoot system development","termid":"GO:0090567"}


id: PR:P36585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.07","synonyms":[{"name":"L27A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L29 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl2802","type":"exact"}],"termid":"PR:P36585"}


id: PBO:0060300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 10","termid":"PBO:0060300"}


id: PBO:0109833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex, phosphatidylinositol pseudokinase subunit Tra1","termid":"PBO:0109833"}


id: PBO:0040811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 2","termid":"PBO:0040811"}


id: GO:0005927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction found at the terminal anchorage site of skeletal muscle cells to tendons.","definition_xrefs":["GOC:mtg_muscle","PMID:12842007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"muscle tendon junction","synonyms":[{"name":"myotendinous junction","type":"exact"}],"termid":"GO:0005927"}


id: GO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the configuration of the constituent parts of an anatomical structure. This process pertains to the physical shaping of a rudimentary structure. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure arrangement","synonyms":[{"name":"anatomical structure organization","type":"broad"},{"name":"anatomical structure structural organization","type":"exact"},{"name":"organization of an anatomical structure","type":"exact"},{"name":"structural organization","type":"exact"}],"termid":"GO:0048532"}


id: GO:0045771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces autophagosome size.","definition_xrefs":["GOC:autophagy","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of autophagosome size","synonyms":[{"name":"down regulation of autophagic vacuole size","type":"exact"},{"name":"down-regulation of autophagic vacuole size","type":"exact"},{"name":"downregulation of autophagic vacuole size","type":"exact"},{"name":"inhibition of autophagic vacuole size","type":"narrow"},{"name":"negative regulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045771"}


id: GO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid.","definition_xrefs":["EC:5.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"steroid delta-isomerase activity","secondary_identifiers":["RHEA:14709","Reactome:R-HSA-193052","MetaCyc:STEROID-DELTA-ISOMERASE-RXN","Reactome:R-HSA-193073","Reactome:R-HSA-195690","Reactome:R-HSA-6807052","Reactome:R-HSA-193961"],"synonyms":[{"name":"3-oxosteroid delta5-delta4-isomerase activity","type":"related"},{"name":"3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-keto steroid isomerase activity","type":"related"},{"name":"delta(5)-3-ketosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-steroid isomerase activity","type":"related"},{"name":"delta5(or delta4)-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-ketosteroid isomerase activity","type":"related"},{"name":"delta5-3-oxosteroid isomerase activity","type":"related"},{"name":"delta5-ketosteroid isomerase activity","type":"related"},{"name":"delta5-steroid isomerase activity","type":"related"},{"name":"hydroxysteroid isomerase activity","type":"related"},{"name":"steroid D-isomerase activity","type":"exact"},{"name":"steroid isomerase activity","type":"related"}],"termid":"GO:0004769"}


id: GO:0010222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the stem of vascular plants.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem vascular tissue pattern formation","termid":"GO:0010222"}


id: FYPO:0004146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxine:NADP 4-dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal pyridoxine:NADP 4-dehydrogenase activity","termid":"FYPO:0004145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased pyridoxine:NADP 4-dehydrogenase activity","synonyms":[{"name":"reduced pyridoxine:NADP 4-dehydrogenase activity","type":"exact"}],"termid":"FYPO:0004146"}


id: PBO:0076223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene 2","termid":"PBO:0076223"}


id: PBO:0091920
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human nuclear UNG","termid":"PBO:0091920"}


id: PBO:0040211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL3 divergent transcript","termid":"PBO:0040211"}


id: PBO:0029372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029372"}


id: PBO:0042442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 2","termid":"PBO:0042442"}


id: GO:0070343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of white fat cells by cell division, resulting in the expansion of their population.","definition_xrefs":["CL:0000448","GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"white fat cell proliferation","synonyms":[{"name":"white adipocyte proliferation","type":"exact"},{"name":"white adipose cell proliferation","type":"exact"}],"termid":"GO:0070343"}


id: PBO:0076921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor B2, mitochondrial","termid":"PBO:0076921"}


id: PBO:0033775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_termination_of_RNA_polymerase_II_transcription_at_RTS1_barrier","termid":"PBO:0033775"}


id: PBO:0030840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_guanine_import","termid":"PBO:0030840"}


id: MOD:00379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine microcin E492 siderophore ester.","definition_xrefs":["PubMed:15102848","Unimod:448#C-term","RESID:AA0374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine microcin E492 siderophore ester","synonyms":[{"name":"L-serine microcin E492 siderophore ester","type":"exact"},{"name":"MOD_RES Serine microcin E492 siderophore ester","type":"exact"},{"name":"Microcin","type":"related"},{"name":"N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine","type":"exact"},{"name":"microcin E492 siderophore ester from serine","type":"related"}],"termid":"MOD:00379"}


id: PBO:0039041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 3","termid":"PBO:0039041"}


id: SOFP:citation
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citation","termid":"SOFP:citation"}


id: PBO:0074897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 71","termid":"PBO:0074897"}


id: GO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Posterior movement of an organism, e.g. following the direction of the tail of an animal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directional locomotion","termid":"GO:0033058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"backward locomotion","termid":"GO:0043057"}


id: PBO:0075492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 2, pseudogene","termid":"PBO:0075492"}


id: PBO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 antisense RNA 1","termid":"PBO:0042323"}


id: GO:0102764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-deoxotyphasterol + O2 + a reduced electron acceptor = 6-deoxocastasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-deoxotyphasterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-777"],"termid":"GO:0102764"}


id: PBO:0070079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 36, pseudogene","termid":"PBO:0070079"}


id: PBO:0066411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reelin","termid":"PBO:0066411"}


id: PBO:0041864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 9","termid":"PBO:0041864"}


id: PR:Q9P6J2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6J2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe(2+)/Mn(2+) transporter pcl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.10c","synonyms":[{"name":"Spom972h-pcl1","type":"exact"},{"name":"pombe ccc1-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6J2"}


id: GO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + ATP + UDP-N-acetylmuramoyl-L-alanine = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate.","definition_xrefs":["EC:6.3.2.9","RHEA:16429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanine-D-glutamate ligase activity","secondary_identifiers":["KEGG_REACTION:R02783","MetaCyc:UDP-NACMURALA-GLU-LIG-RXN"],"synonyms":[{"name":"D-glutamate ligase activity","type":"related"},{"name":"D-glutamate-adding enzyme activity","type":"related"},{"name":"MurD synthetase activity","type":"related"},{"name":"UDP-Mur-NAC-L-Ala:D-Glu ligase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine:glutamate ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase activity","type":"related"}],"termid":"GO:0008764"}


id: GO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of adhesin from the periplasm to the external milieu; the adhesin and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autotransporter activity","termid":"GO:0015474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"adhesin autotransporter activity","termid":"GO:0015475"}


id: PBO:0069771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1054, pseudogene","termid":"PBO:0069771"}


id: GO:1903139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of MAPK cascade involved in cell wall organization or biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stress-activated MAPK cascade","termid":"GO:0032874"},{"relation_name":"is_a","term_name":"regulation of cell wall integrity MAPK cascade","termid":"GO:1903137"},{"relation_name":"positively_regulates","term_name":"cell wall integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell wall integrity MAPK cascade","synonyms":[{"name":"activation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"activation of MAPK cascade involved in cell wall organization or biogenesis","type":"narrow"},{"name":"activation of MAPKKK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"activation of Mpk1 cascade","type":"narrow"},{"name":"activation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"activation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"activation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"activation of Slt2 cascade","type":"narrow"},{"name":"activation of cell integrity MAPK pathway","type":"narrow"},{"name":"activation of cell wall biogenesis, MAPKKK cascade","type":"narrow"},{"name":"positive regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"positive regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"positive regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"positive regulation of Mpk1 cascade","type":"narrow"},{"name":"positive regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"positive regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"positive regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"positive regulation of Slt2 cascade","type":"narrow"},{"name":"positive regulation of cell integrity MAPK pathway","type":"exact"},{"name":"positive regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"up regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"up regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"up regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"up regulation of Mpk1 cascade","type":"narrow"},{"name":"up regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"up regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"up regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"up regulation of Slt2 cascade","type":"narrow"},{"name":"up regulation of cell integrity MAPK pathway","type":"exact"},{"name":"up regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"up-regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"up-regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"up-regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"up-regulation of Mpk1 cascade","type":"narrow"},{"name":"up-regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"up-regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"up-regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"up-regulation of Slt2 cascade","type":"narrow"},{"name":"up-regulation of cell integrity MAPK pathway","type":"exact"},{"name":"up-regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"upregulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"upregulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"upregulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"upregulation of Mpk1 cascade","type":"narrow"},{"name":"upregulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"upregulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"upregulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"upregulation of Slt2 cascade","type":"narrow"},{"name":"upregulation of cell integrity MAPK pathway","type":"exact"},{"name":"upregulation of cell wall biogenesis, MAPKKK cascade","type":"exact"}],"termid":"GO:1903139"}


id: PBO:0034201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-main_stem_of","termid":"PBO:0034201"}


id: PBO:0046447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythropoietin receptor","termid":"PBO:0046447"}


id: FYPO:0002208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a larger volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spore","termid":"FYPO:0002207"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen spore with abnormal shape","secondary_identifiers":["FYPO:0002205"],"synonyms":[{"name":"inviable enlarged spore with abnormal shape","type":"related"},{"name":"inviable large spore with abnormal shape","type":"related"},{"name":"inviable spore with increased size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with increased volume and abnormal shape","type":"exact"},{"name":"inviable swollen abnormally shaped spore","type":"exact"},{"name":"inviable swollen misshapen spore","type":"related"},{"name":"lethal; swollen spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, enlarged spore with abnormal shape","type":"related"},{"name":"spore germination abolished, large spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell volume","type":"exact"},{"name":"spore germination abolished, swollen misshapen spores","type":"related"},{"name":"spore germination abolished, swollen spore with abnormal shape","type":"related"}],"termid":"FYPO:0002208"}


id: PBO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase (predicted)","termid":"PBO:0001272"}


id: PBO:0044294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 4","termid":"PBO:0044294"}


id: PBO:0058657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6785","termid":"PBO:0058657"}


id: PBO:0081436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF286A-TBC1D26 readthrough (NMD candidate)","termid":"PBO:0081436"}


id: FYPO:0002754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cysteine synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000654","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}


id: GO:1901705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-isoleucine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"isoleucine biosynthetic process","termid":"GO:0009097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-isoleucine biosynthetic process","synonyms":[{"name":"L-isoleucine anabolism","type":"exact"},{"name":"L-isoleucine biosynthesis","type":"exact"},{"name":"L-isoleucine formation","type":"exact"},{"name":"L-isoleucine synthesis","type":"exact"}],"termid":"GO:1901705"}


id: PBO:0080302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 66 pseudogene","termid":"PBO:0080302"}


id: PBO:0059364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A pseudogene 1","termid":"PBO:0059364"}


id: PBO:0035939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-S10_phosphorylation_during_vegetative_growth","termid":"PBO:0035939"}


id: GO:2001094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xylotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"xylotriose transport","termid":"GO:2001094"}


id: PATO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaly","synonyms":[{"name":"squamous","type":"related"}],"termid":"PATO:0001804"}


id: GO:0035622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the intrahepatic bile ducts over time, from their formation to the mature structure. Intrahepatic bile ducts (bile ducts within the liver) collect bile from bile canaliculi in the liver, and connect to the extrahepatic bile ducts (bile ducts outside the liver).","definition_xrefs":["GOC:bf","PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct development","termid":"GO:0061009"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intrahepatic bile duct development","synonyms":[{"name":"IHBD development","type":"exact"},{"name":"intrahepatic biliary duct development","type":"exact"}],"termid":"GO:0035622"}


id: PBO:0082971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; protein overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate","termid":"PBO:0082971"}


id: FYPO:0004095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization during meiotic cell cycle","synonyms":[{"name":"normal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004095"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:lm","GOC:mtg_muscle","GOC:jid","GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: FYPO:0001365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring contraction is decreased. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of cytokinesis","termid":"FYPO:0000419"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"decreased rate of actomyosin contractile ring contraction","synonyms":[{"name":"decreased rate of actomyosin contractile ring constriction","type":"exact"},{"name":"decreased rate of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"decreased rate of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"decreased rate of contractile ring contraction","type":"exact"},{"name":"decreased rate of cytokinetic contractile ring contraction","type":"exact"},{"name":"decreased rate of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"decreased rate of mitotic contractile ring contraction","type":"exact"},{"name":"reduced rate of actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0001365"}


id: PBO:0069705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 985, pseudogene","termid":"PBO:0069705"}


id: GO:0046644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell activation","synonyms":[{"name":"down regulation of gamma-delta T cell activation","type":"exact"},{"name":"down-regulation of gamma-delta T cell activation","type":"exact"},{"name":"downregulation of gamma-delta T cell activation","type":"exact"},{"name":"inhibition of gamma-delta T cell activation","type":"narrow"},{"name":"negative regulation of gamma-delta T lymphocyte activation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell activation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046644"}


id: PBO:0088032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin activating enzyme (E1); involved in ubiquitin-mediated protein degradation and essential for viability; protein abundance increases in response to DNA replication stress","termid":"PBO:0088032"}


id: GO:0008362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis, including the chemical reactions and pathways resulting in the formation of chitin and other components, and deposition of a chitin-based embryonic cuticle by the underlying epidermal epithelium. This tough, waterproof cuticle layer is essential to provide structural integrity of the larval body. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","PMID:12019232","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based embryonic cuticle biosynthetic process","synonyms":[{"name":"embryonic cuticle anabolism","type":"broad"},{"name":"embryonic cuticle biosynthetic process","type":"broad"},{"name":"embryonic cuticle formation","type":"broad"},{"name":"embryonic cuticle synthesis","type":"broad"}],"termid":"GO:0008362"}


id: PBO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC vitamin D binding protein","termid":"PBO:0048448"}


id: PR:P87155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein unc-50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03628","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein GMH1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.14","secondary_identifiers":["UniProtKB:P87155"],"synonyms":[{"name":"Spom972h-UNC50","type":"exact"},{"name":"meiotically up-regulated gene 16 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87155"}


id: PBO:0074864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49B","termid":"PBO:0074864"}


id: FYECO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000164 anti-tubulin antibodies added (obsolete FYECO:0000164)","synonyms":[{"name":"anti-tubulin antibody added","type":"exact"}],"termid":"FYECO:0000164"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: PBO:0034053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-skeleton_of","termid":"PBO:0034053"}


id: GO:0032978
data:
  {"annotated_genes":["SJAG_01917","SJAG_01405","SJAG_05302","SJAG_03633","SJAG_05300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84913,95064,110733,109394,96967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process in which a protein is incorporated into a lipid bilayer, e.g., the prokaryotic, mitochondrial, or chloroplast inner membrane, from the inner side.","definition_xrefs":["PMID:15473843","PMID:14739936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein insertion into membrane from inner side","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"insertion of proteins into membrane from the inner side","type":"exact"}],"termid":"GO:0032978","terms_by_termid":{"GO:0032979":null}}


id: GO:1990119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an RNA helicase.","definition_xrefs":["GOC:rb","PMID:23721653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ATPase inhibitor activity","termid":"GO:0042030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0004857","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"RNA helicase inhibitor activity","synonyms":[{"name":"ATP-dependent RNA helicase inhibitor activity","type":"exact"}],"termid":"GO:1990119"}


id: PBO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)","termid":"PBO:0000484"}


id: PBO:0044168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap binding complex dependent translation initiation factor","termid":"PBO:0044168"}


id: PBO:0091123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7","termid":"PBO:0091123"}


id: PBO:0058909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12127","termid":"PBO:0058909"}


id: PBO:0085290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene","termid":"PBO:0085290"}


id: GO:0018001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal tyrosine of proteins to form the derivative N-acetyl-L-valine.","definition_xrefs":["RESID:AA0054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-valine modification","termid":"GO:0018213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-valine acetylation","termid":"GO:0018001"}


id: PBO:0075351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member B","termid":"PBO:0075351"}


id: GO:0003759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct, non-covalent assembly of glycoproteins in vivo, but is not a component of the assembled structures when performing its normal biological function. Utilizes a lectin site as a means to associate with the unfolded glycoproteins.","definition_xrefs":["PMID:11337494","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein-specific chaperone activity (obsolete GO:0003759)","synonyms":[{"name":"glycoprotein-specific chaperone activity","type":"exact"}],"termid":"GO:0003759"}


id: GO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mtg_sensu","GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of plasma membrane","termid":"GO:0031232"},{"relation_name":"part_of","term_name":"periplasmic side of plasma membrane","termid":"GO:0098567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0009986"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of plasma membrane","secondary_identifiers":["GO:0031238"],"synonyms":[{"name":"extrinsic to external leaflet of plasma membrane, in periplasmic space","type":"narrow"},{"name":"extrinsic to external side of plasma membrane, in periplasmic space","type":"narrow"}],"termid":"GO:0031236"}


id: GO:0042026
data:
  {"annotated_genes":["SJAG_00790","SJAG_03052","SJAG_01186","SJAG_02825","SJAG_04371","SJAG_00403","SJAG_01510","SJAG_00436","SJAG_03135","SJAG_04511","SJAG_03166","SJAG_01874","SJAG_03992","SJAG_03237","SJAG_01052","SJAG_04187","SJAG_04055","SJAG_01615","SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74979,84030,84454,84858,84859,89156,94631,95299,98382,98986,99247,100264,100721,101029,106325,106878,106981,111533,111534,112768,113180],"is_not":false,"summary":null,"term":"GO:0042026"}]},"cv_name":"biological_process","definition":"The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00564":null,"SJAG_00790":null,"SJAG_01052":null,"SJAG_01186":null,"SJAG_01510":null,"SJAG_01615":null,"SJAG_01874":null,"SJAG_02825":null,"SJAG_03052":null,"SJAG_03135":null,"SJAG_03166":null,"SJAG_03237":null,"SJAG_03992":null,"SJAG_04055":null,"SJAG_04187":null,"SJAG_04371":null,"SJAG_04511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006457","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"protein refolding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"heat shock protein activity","type":"related"}],"termid":"GO:0042026","terms_by_termid":{"GO:0042026":null}}


id: GO:0140418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host structure or process. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated modulation of host process by symbiont","synonyms":[{"name":"effector mediated modulation of host process by symbiont","type":"exact"},{"name":"effector triggered modulation of host process by symbiont","type":"exact"},{"name":"effector-dependent modulation of host process by symbiont","type":"exact"}],"termid":"GO:0140418"}


id: GO:0097714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to viscosity","termid":"GO:0097714"}


id: PBO:0039395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 1","termid":"PBO:0039395"}


id: PBO:0055344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2772","termid":"PBO:0055344"}


id: GO:0033104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that permits the transfer of proteins into the extracellular milieu or directly into host cells via the type VI secretion system. Proteins secreted by this complex do not require an N-terminal signal sequence.","definition_xrefs":["GOC:mlg","PMID:16763151","PMID:16432199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"type VI protein secretion system complex","synonyms":[{"name":"T6SS complex","type":"exact"}],"termid":"GO:0033104"}


id: PBO:0073581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2B","termid":"PBO:0073581"}


id: SO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).","definition_xrefs":["PMID:16827941:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv4_motif","synonyms":[{"name":"DMv4","type":"exact"},{"name":"DMv4 motif","type":"exact"},{"name":"YGGTCACATR","type":"narrow"},{"name":"directional motif v4","type":"exact"},{"name":"motif 1 element","type":"exact"},{"name":"promoter motif 1","type":"exact"}],"termid":"SO:0001157"}


id: PBO:0064435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1","termid":"PBO:0064435"}


id: SO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudoknot which contains two stems and at least two loops.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudoknot","termid":"SO:0000591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_pseudoknot","synonyms":[{"name":"H pseudoknot","type":"exact"},{"name":"H-pseudoknot","type":"exact"},{"name":"H-type pseudoknot","type":"exact"},{"name":"classical pseudoknot","type":"exact"},{"name":"hairpin-type pseudoknot","type":"exact"}],"termid":"SO:0000592"}


id: GO:1902404
data:
  {"annotated_genes":["SJAG_03703","SJAG_03379","SJAG_00845","SJAG_02431","SJAG_01665","SJAG_03936","SJAG_04597","SJAG_03581","SJAG_03631","SJAG_04498","SJAG_04077","SJAG_00268","SJAG_04887","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91360,93720,94105,96752,96984,98480,108349,113892],"is_not":false,"summary":null,"term":"GO:1902404"},{"annotations":[99758],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[83652,106568,90484,90652,109407],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any actomyosin contractile ring contraction that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring contraction","termid":"GO:0000916"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00268":null,"SJAG_00845":null,"SJAG_01665":null,"SJAG_02431":null,"SJAG_03379":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03936":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1902404","terms_by_termid":{"GO:1902404":null,"GO:1903472":null,"GO:1903473":null}}


id: GO:0003357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron, a neuron that secretes noradrenaline.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron differentiation","synonyms":[{"name":"norepinephrine secreting neuron differentiation","type":"exact"}],"termid":"GO:0003357"}


id: GO:0071360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to exogenous dsRNA","termid":"GO:0043330"},{"relation_name":"is_a","term_name":"cellular response to dsRNA","termid":"GO:0071359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to exogenous dsRNA","synonyms":[{"name":"cellular response to exogenous double-stranded RNA","type":"exact"},{"name":"cellular response to viral dsRNA","type":"narrow"}],"termid":"GO:0071360"}


id: PBO:0027606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_copper_ion","termid":"PBO:0027606"}


id: PBO:0036267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex associated ATPase Bud32 (predicted)","termid":"PBO:0036267"}


id: PBO:0057392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548e","termid":"PBO:0057392"}


id: PBO:0087553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop7p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087553"}


id: PBO:0029317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_subtelomere","termid":"PBO:0029317"}


id: PR:O14173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csi2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4D7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.07c","synonyms":[{"name":"Spom972h-csi2","type":"exact"}],"termid":"PR:O14173"}


id: PBO:0062173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 16 pseudogene","termid":"PBO:0062173"}


id: PBO:0040386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B1","termid":"PBO:0040386"}


id: PBO:0051722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor","termid":"PBO:0051722"}


id: PBO:0087244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich, hydrophilic protein; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants; expression is under glucose control; cotranscribed with NAM7 in a cyp1 mutant; ISF1 has a paralog, MBR1, that arose from the whole genome duplication","termid":"PBO:0087244"}


id: GO:0019072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral genome within the capsid.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome packaging","termid":"GO:0019072"}


id: PBO:0066191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 12B","termid":"PBO:0066191"}


id: PBO:0076827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase associated protein 1","termid":"PBO:0076827"}


id: PBO:0003849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase (predicted)","termid":"PBO:0003849"}


id: GO:1904752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:20693317","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904752"}


id: PBO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt subfamily","termid":"PBO:0001421"}


id: FYPO:0000388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of biofilm formation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biofilm formation","termid":"FYPO:0000630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased biofilm formation","synonyms":[{"name":"biofilm formation: increased","type":"related"}],"termid":"FYPO:0000388"}


id: PBO:0039695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 1","termid":"PBO:0039695"}


id: GO:0009727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an ethylene (ethene) stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to ethylene","termid":"GO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of ethylene stimulus","synonyms":[{"name":"detection of ethene stimulus","type":"exact"},{"name":"perception of ethene stimulus","type":"related"},{"name":"perception of ethylene stimulus","type":"related"}],"termid":"GO:0009727"}


id: GO:0009060
data:
  {"annotated_genes":["SJAG_00755","SJAG_03490","SJAG_MIT04","SJAG_07006","SJAG_00915","SJAG_02006","SJAG_02592","SJAG_02433","SJAG_00438","SJAG_01630","SJAG_01895","SJAG_03064","SJAG_02464","SJAG_MIT20","SJAG_MIT37","SJAG_00542","SJAG_01355","SJAG_03925","SJAG_02398","SJAG_00601","SJAG_01190","SJAG_01062","SJAG_03290","SJAG_00836","SJAG_03163","SJAG_01671","SJAG_03920","SJAG_02504","SJAG_00976","SJAG_01077","SJAG_MIT15","SJAG_01539","SJAG_04843","SJAG_MIT03","SJAG_02158","SJAG_MIT13","SJAG_02744","SJAG_02105","SJAG_MIT09","SJAG_00985","SJAG_00698","SJAG_05629","SJAG_02564","SJAG_00866","SJAG_07003","SJAG_00260","SJAG_01524","SJAG_01753","SJAG_03114","SJAG_01490","SJAG_01922","SJAG_03588","SJAG_06382","SJAG_04122","SJAG_03813","SJAG_05204","SJAG_01402","SJAG_02598","SJAG_02646","SJAG_04152","SJAG_07007","SJAG_00080","SJAG_01763","SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83545,91077,95088,104638,110280,114465],"is_not":false,"summary":null,"term":"GO:0009060"},{"annotations":[112150],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042775"},{"annotations":[110694,115071,104328,111491,110268,112151,115047,115026,112855,88023,84318],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[108896],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[85289,109240,84928,112794],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[114164,109446,86073,100132,104005,115051,100534,111136,112152,113698],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006122"},{"annotations":[92793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006119"},{"annotations":[103856,104832,101038,115059,89939,99713,85235,88914,115054,99742,90913,115063,111884,89339,99091,103946,97869],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[105740,90447,93694,107923],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[86014,69848,85290,90530,109242,111011,111779,108111,106174,102774,112795,112598,95518,109497,84929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.","definition_xrefs":["GOC:das","ISBN:0140513590","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01402":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01539":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02006":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04843":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06382":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_respiration#Aerobic_respiration","MetaCyc:PWY-3781"],"termid":"GO:0009060","terms_by_termid":{"GO:0006099":null,"GO:0006119":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0009060":null,"GO:0042775":null,"GO:0042776":null,"GO:1903715":null}}


id: GO:1905735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["PMID:24344203","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proline transport","termid":"GO:0070881"},{"relation_name":"is_a","term_name":"regulation of proline import across plasma membrane","termid":"GO:1902834"},{"relation_name":"regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"}


id: PBO:0004361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo4-Spo6 kinase complex regulatory subunit Spo6","termid":"PBO:0004361"}


id: PBO:0036323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get3 (predicted)","termid":"PBO:0036323"}


id: PBO:0061152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 4","termid":"PBO:0061152"}


id: GO:0052016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host glucan (obsolete GO:0052016)","synonyms":[{"name":"catabolism by organism of host glucan","type":"exact"}],"termid":"GO:0052016"}


id: PBO:0077185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR8 antisense RNA 1","termid":"PBO:0077185"}


id: PBO:0079649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S pseudogene 2","termid":"PBO:0079649"}


id: GO:0045053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The retention of proteins within the Golgi apparatus. Golgi-localized carbohydrate-modifying enzymes have a short N-terminal domain that faces the cytosol, a single transmembrane alpha helix, and a large C-terminal domain that faces the Golgi lumen and that contains the catalytic site. How the membrane-spanning alpha helix in a Golgi enzyme causes its localization and prevents its movement to the plasma membrane is not known.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein retention in Golgi apparatus","synonyms":[{"name":"maintenance of protein location in Golgi apparatus","type":"related"},{"name":"protein-Golgi retention","type":"exact"},{"name":"retention of protein in Golgi","type":"exact"}],"termid":"GO:0045053"}


id: SO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is increased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_polyadenylation_variant","synonyms":[{"name":"increased polyadenylation variant","type":"exact"}],"termid":"SO:0001802"}


id: GO:0062197
data:
  {"annotated_genes":["SJAG_03414","SJAG_04953","SJAG_01084","SJAG_03828","SJAG_03924","SJAG_06621","SJAG_03896","SJAG_03653","SJAG_03330","SJAG_02515","SJAG_03893","SJAG_06622","SJAG_02858","SJAG_02592","SJAG_01292","SJAG_01162","SJAG_03903","SJAG_04311","SJAG_04205","SJAG_02485","SJAG_00661","SJAG_02342","SJAG_02573","SJAG_02495","SJAG_00668","SJAG_04403","SJAG_03185","SJAG_04726","SJAG_04632","SJAG_02249","SJAG_04125","SJAG_04036","SJAG_00027","SJAG_00596","SJAG_00419","SJAG_04823","SJAG_02091","SJAG_02044","SJAG_01734","SJAG_00141","SJAG_02883","SJAG_02135","SJAG_06611","SJAG_04287","SJAG_04668","SJAG_01216","SJAG_01855","SJAG_02433","SJAG_04063","SJAG_03166","SJAG_02945","SJAG_04788","SJAG_00409","SJAG_05181","SJAG_03303","SJAG_04399","SJAG_00984","SJAG_01199","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113388,114288,104876,101073,96049,91267],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[88472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[85607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[98275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071500"},{"annotations":[113105,100573,92047,110504,112324,106385,90437,87959,102533,98848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[104979,110780,86291,92064,103850,74110,67377,97857,72285,97910,104984,101256,112766,90438,104978,104982,104980,104981,85506,86191,104983,86978,93691,110505,89326,91641,97044,97392,89630,109548,88228,84681,94022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[96050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[96224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[89194,58058,64533,96210,85093,95329,67547,106137,106182,85507],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus indicating the organism is under stress.","definition_xrefs":["PMID:26653712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00409":null,"SJAG_00419":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02091":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02342":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02883":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03185":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04205":null,"SJAG_04287":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemical stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0062197","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0034614":null,"GO:0061692":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071500":null}}


id: FYPO:0000956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bismuth ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on bismuth","synonyms":[{"name":"normal cell population growth in presence of bismuth","type":"exact"},{"name":"normal cell population growth on bismuth","type":"exact"},{"name":"normal cellular response to bismuth","type":"related"},{"name":"normal growth on bismuth ions","type":"exact"},{"name":"normal vegetative cell population growth on bismuth","type":"exact"}],"termid":"FYPO:0000956"}


id: PBO:0075749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2","termid":"PBO:0075749"}


id: GO:0009180
data:
  {"annotated_genes":["SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine ribonucleoside diphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate biosynthetic process","termid":"GO:0009136"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate biosynthetic process","termid":"GO:0009188"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside diphosphate anabolism","type":"exact"},{"name":"purine ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside diphosphate formation","type":"exact"},{"name":"purine ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009180","terms_by_termid":{"GO:0006172":null}}


id: GO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tellurite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tellurite transport","termid":"GO:0015710"}


id: PBO:0082899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like component of RNA polymerase II holoenzyme; involved in phosphorylation of RNAPII C-terminal domain; forms kinase-cyclin pair in RNAPII holoenzyme with Ssn3p; needed for entry into and execution of meiotic program; involved in glucose repression, telomere maintenance; degraded in response to nitrogen starvation, and also to oxidative stress, but in different cellular compartments, and with different cellular outcomes; 35% identical to human cyclin C","termid":"PBO:0082899"}


id: PBO:0053406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 339","termid":"PBO:0053406"}


id: FYPO:0001894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more or fewer than four spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation of asci with more or fewer than four spores","type":"exact"},{"name":"abnormal spore number","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more or fewer than four spores","type":"exact"}],"termid":"FYPO:0001894"}


id: PATO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000904 wild abortive value (obsolete PATO:0000904)","termid":"PATO:0000904"}


id: MOD:01288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:255#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +28","termid":"MOD:00578"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28 - site H","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:01288"}


id: PBO:0066818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 117","termid":"PBO:0066818"}


id: PBO:0078480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 4-1","termid":"PBO:0078480"}


id: GO:0060201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted acetylcholine transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted acetylcholine transport vesicle","termid":"GO:0060200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle membrane","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle membrane","type":"exact"}],"termid":"GO:0060201"}


id: PR:O74745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- anp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan polymerase II complex anp1 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.04","synonyms":[{"name":"M-Pol II subunit anp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-anp1","type":"exact"}],"termid":"PR:O74745"}


id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: PBO:0025535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22 (predicted)","termid":"PBO:0025535"}


id: PATO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on a sloping line joining two nonconsecutive points of an entity relative to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diagonal to","termid":"PATO:0002392"}


id: PBO:0053344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 222","termid":"PBO:0053344"}


id: GO:0032916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta3 production","termid":"GO:0032910"},{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta production","termid":"GO:0071636"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta3 production","synonyms":[{"name":"activation of transforming growth factor-beta3 production","type":"narrow"},{"name":"positive regulation of TGF-B3 production","type":"exact"},{"name":"positive regulation of TGFB3 production","type":"exact"},{"name":"positive regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"stimulation of transforming growth factor-beta3 production","type":"narrow"},{"name":"up regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"up-regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"upregulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032916"}


id: PBO:0016533
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab5","termid":"PBO:0016533"}


id: MOD:01872
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxymethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of water.","definition_xrefs":["PubMed:12643538","Unimod:26"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxymethyl-L-cysteine","termid":"MOD:01061"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized N-terminal S-carboxymethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01872"}


id: GO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an adenylyl group (adenosine 5'-monophosphate; AMP) from a protein amino acid.","definition_xrefs":["GOC:sp","PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein denucleotidylation","termid":"GO:0044601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deadenylylation","synonyms":[{"name":"protein deAMPylation","type":"exact"}],"termid":"GO:0044602"}


id: GO:0047856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydrocoumarin + H2O = 3-(2-hydroxyphenyl)propanoate + H+.","definition_xrefs":["EC:3.1.1.35","RHEA:10360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dihydrocoumarin hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03692","MetaCyc:DIHYDROCOUMARIN-LIPASE-RXN"],"synonyms":[{"name":"dihydrocoumarin lactonohydrolase activity","type":"related"},{"name":"dihydrocoumarin lipase activity","type":"exact"}],"termid":"GO:0047856"}


id: PATO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality of a process","termid":"PATO:0002062"}


id: PBO:0048046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 4","termid":"PBO:0048046"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: GO:1903035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to wounding.","definition_xrefs":["PMID:19164535","GOC:kmv","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"negatively_regulates","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to wounding","synonyms":[{"name":"down regulation of physiological response to wounding","type":"exact"},{"name":"down regulation of response to wounding","type":"exact"},{"name":"down-regulation of physiological response to wounding","type":"exact"},{"name":"down-regulation of response to wounding","type":"exact"},{"name":"downregulation of physiological response to wounding","type":"exact"},{"name":"downregulation of response to wounding","type":"exact"},{"name":"inhibition of physiological response to wounding","type":"narrow"},{"name":"inhibition of response to wounding","type":"narrow"},{"name":"negative regulation of physiological response to wounding","type":"exact"}],"termid":"GO:1903035"}


id: PBO:0029201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amphotericin_B","termid":"PBO:0029201"}


id: PBO:0056262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing 2","termid":"PBO:0056262"}


id: GO:1900079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"is_a","term_name":"regulation of arginine metabolic process","termid":"GO:0000821"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of cellular amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"arginine biosynthetic process","termid":"GO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of arginine biosynthetic process","synonyms":[{"name":"regulation of arginine anabolism","type":"exact"},{"name":"regulation of arginine biosynthesis","type":"exact"},{"name":"regulation of arginine formation","type":"exact"},{"name":"regulation of arginine synthesis","type":"exact"}],"termid":"GO:1900079"}


id: PBO:0085201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7","termid":"PBO:0085201"}


id: PBO:0053639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 686","termid":"PBO:0053639"}


id: GO:0048403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to brain-derived neurotrophic factor.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin binding","termid":"GO:0043121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"brain-derived neurotrophic factor binding","synonyms":[{"name":"BDNF binding","type":"exact"},{"name":"neurotrophin TRKB receptor activity","type":"related"}],"termid":"GO:0048403"}


id: GO:0030892
data:
  {"annotated_genes":["SJAG_05019","SJAG_01067","SJAG_01831","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83932,87007,103784,112894],"is_not":false,"summary":null,"term":"GO:0030892"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex.","definition_xrefs":["GOC:mah","PMID:12750522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01831":null,"SJAG_03418":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034990"],"synonyms":[{"name":"nuclear mitotic cohesin complex","type":"related"}],"termid":"GO:0030892","terms_by_termid":{"GO:0030892":null}}


id: PBO:0091685
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated non-conserved ORF in low complexity region","termid":"PBO:0091685"}


id: PBO:0078111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-1","termid":"PBO:0078111"}


id: GO:0106236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation/production of a glycolipid surfactant that acts as a bacterial biofilm dispersal.","definition_xrefs":["PMID:28715477","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"rhamnolipid biosynthesis","synonyms":[{"name":"rhamnolipid production","type":"related"}],"termid":"GO:0106236"}


id: PBO:0073234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 7","termid":"PBO:0073234"}


id: PBO:0075966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 7","termid":"PBO:0075966"}


id: PBO:0078485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-5","termid":"PBO:0078485"}


id: PBO:0028606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_pyrithiamine","termid":"PBO:0028606"}


id: PBO:0052096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 13","termid":"PBO:0052096"}


id: GO:1900858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of brevianamide F biosynthetic process (obsolete GO:1900858)","synonyms":[{"name":"regulation of brevianamide F anabolism","type":"exact"},{"name":"regulation of brevianamide F biosynthesis","type":"exact"},{"name":"regulation of brevianamide F formation","type":"exact"},{"name":"regulation of brevianamide F synthesis","type":"exact"}],"termid":"GO:1900858"}


id: PBO:0087123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-type ubiquitin ligase of the endosomal and vacuolar membranes; binds phosphatidylinositol 3-phosphate; contains a FYVE finger domain","termid":"PBO:0087123"}


id: PBO:0062307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 4 pseudogene","termid":"PBO:0062307"}


id: PR:Q09900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.12","synonyms":[{"name":"Spom972h-rpl3802","type":"exact"}],"termid":"PR:Q09900"}


id: GO:0045431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroflavonol + 2-oxoglurate + O2 = a flavonol + succinate + CO2 + H2O.","definition_xrefs":["EC:1.14.20.6","ISBN:0943088372","PMID:7904213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"flavonol synthase activity","secondary_identifiers":["RHEA:21088"],"synonyms":[{"name":"FLS activity","type":"related"},{"name":"dihydroflavonol,2-oxoglutarate:oxygen oxidoreductase activity","type":"related"},{"name":"flavonoid 2-oxoglutarate-dependent dioxygenase activity","type":"related"}],"termid":"GO:0045431"}


id: GO:0007137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase II, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis II.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase","termid":"GO:0051323"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051327"}],"interesting_parent_ids":["GO:0051327","GO:0008150"],"is_obsolete":false,"name":"meiotic metaphase II","termid":"GO:0007137"}


id: PBO:0081040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 18","termid":"PBO:0081040"}


id: GO:1904128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["GOC:dph","PMID:24892953","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in axis elongation","termid":"GO:1901233"},{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in gastrulation","termid":"GO:1904104"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in somitogenesis","synonyms":[{"name":"down regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"down-regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"downregulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"inhibition of convergent extension involved in somitogenesis","type":"narrow"}],"termid":"GO:1904128"}


id: PBO:0063556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plaque enriched lncRNA in atherosclerotic and inflammatory bowel macrophage regulation","termid":"PBO:0063556"}


id: GO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + FMNH(2) + O2 = acetaldehyde + FMN + H2O + H+ + nitrite.","definition_xrefs":["RHEA:26458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitronate monooxygenase (FMN-linked) activity","secondary_identifiers":["KEGG_REACTION:R00025"],"termid":"GO:0036434"}


id: GO:0032400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"melanosome localization","synonyms":[{"name":"melanosome localisation","type":"exact"}],"termid":"GO:0032400"}


id: PBO:0071530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 33","termid":"PBO:0071530"}


id: PR:O13955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vam6/Vps39-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.14","secondary_identifiers":["UniProtKB:O13955"],"synonyms":[{"name":"Spom972h-VPS39","type":"exact"},{"name":"vacuolar protein sorting-associated protein 39 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13955"}


id: GO:0004335
data:
  {"annotated_genes":["SJAG_02950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109780],"is_not":false,"summary":null,"term":"GO:0004335"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + ATP = alpha-D-galactose 1-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.6","RHEA:13553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"galactokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70355","Reactome:R-HSA-5610026","KEGG_REACTION:R01092","MetaCyc:GALACTOKIN-RXN"],"synonyms":[{"name":"ATP:D-galactose 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-galactose-1-phosphotransferase activity","type":"related"},{"name":"galactokinase (phosphorylating)","type":"related"}],"termid":"GO:0004335","terms_by_termid":{"GO:0004335":null}}


id: PBO:0072614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 9","termid":"PBO:0072614"}


id: PBO:0049345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 3","termid":"PBO:0049345"}


id: PBO:0030733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_upon_G0_to_G1_transition","termid":"PBO:0030733"}


id: MOD:00953
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and an L-serine residue by an ester bond and releasing water to form O-(L-isoglutamyl)-L-serine.","definition_xrefs":["RESID:AA0597#ESX","DeltaMass:0","PubMed:19035375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-serine","termid":"MOD:01977"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-serine (Glu-Ser)","synonyms":[{"name":"(2S)-2-amino-5-[(2S)-2-amino-2-carboxyethoxy]-5-oxopentanoic acid","type":"exact"},{"name":"CROSSLNK isoglutamyl serine ester (Ser-Glu)","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)serine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-serine","type":"exact"},{"name":"O-gamma-Glutamyl- (Crosslink to Serine)","type":"exact"},{"name":"O3-(isoglutamyl)-serine","type":"exact"}],"termid":"MOD:00953"}


id: PBO:0111524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 4","termid":"PBO:0111524"}


id: GO:0043584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose development","synonyms":[{"name":"nasus development","type":"exact"}],"termid":"GO:0043584"}


id: PBO:0042656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 5","termid":"PBO:0042656"}


id: PBO:0047782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D3","termid":"PBO:0047782"}


id: GO:0140768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An enzyme-substrate adaptor that bings together a protein ADP-ribosyl transferase and its substrate.","definition_xrefs":["PMID:32028527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-substrate adaptor activity","termid":"GO:0140767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"protein ADP-ribosyltransferase-substrate adaptor activity","termid":"GO:0140768"}


id: GO:0034945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA + CoASH = 3-isopropylbut-3-enoyl-CoA + propanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA C-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.-"],"termid":"GO:0034945"}


id: GO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051329"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051329","GO:0008150"],"is_obsolete":false,"name":"mitotic S phase","synonyms":[{"name":"S phase of mitotic cell cycle","type":"exact"},{"name":"S-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000084"}


id: PBO:0091371
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin Fusion Degradation protein","termid":"PBO:0091371"}


id: GO:0140717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont into host plant tissue via the stromata, microscopic pores in the epidermis of the aerial parts of terrestrial plants. These pores are essential for photosynthesis, as they allow CO2 to diffuse into the plant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29307013","PMID:16959560","PMID:17419713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into host through the stromata","termid":"GO:0140717"}


id: GO:0120080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["PMID:20705471","PMID:8621557","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microfilament motor activity (obsolete GO:0120080)","synonyms":[{"name":"down regulation of actin-activated ATPase activity","type":"related"},{"name":"down regulation of actin-dependent ATPase activity","type":"exact"},{"name":"inhibition of actin-activated ATPase activity","type":"narrow"},{"name":"inhibition of actin-dependent ATPase activity","type":"narrow"},{"name":"negative regulation of actin filament motor activity","type":"exact"},{"name":"negative regulation of actin-activated ATPase activity","type":"related"},{"name":"negative regulation of actin-dependent ATPase activity","type":"related"},{"name":"negative regulation of actin-filament motor activity","type":"exact"},{"name":"negative regulation of muscle motor activity","type":"narrow"},{"name":"negative regulation of myosin ATPase activity","type":"related"}],"termid":"GO:0120080"}


id: PBO:0110374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPBAP1 pseudogene 1","termid":"PBO:0110374"}


id: SO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000245 mRNA_by_polyadenylation_status (obsolete SO:0000245)","termid":"SO:0000245"}


id: FYPO:0008038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitosis in which trimethylation of lysine at position 4 of histone H3 does not occur.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 trimethylation during vegetative growth","termid":"FYPO:0004126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during mitosis","termid":"FYPO:0008038"}


id: PBO:0056912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane integral NOTCH2 associated receptor 1","termid":"PBO:0056912"}


id: FYPO:0007796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan 1,3-alpha-glucosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glucan 1,3-alpha-glucosidase activity","termid":"FYPO:0007796"}


id: PBO:0075392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp5 transcription factor","termid":"PBO:0075392"}


id: FYPO:0000427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal G1 to G0 transition","synonyms":[{"name":"abnormal G1/G0 transition","type":"exact"},{"name":"abnormal cell cycle quiescence","type":"related"},{"name":"abnormal establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0000427"}


id: FYPO:0005171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased uracil import","synonyms":[{"name":"decreased uracil import across plasma membrane","type":"exact"},{"name":"decreased uracil import during mitotic cell cycle","type":"related"},{"name":"decreased uracil import during vegetative growth","type":"exact"},{"name":"decreased uracil import into cell","type":"exact"},{"name":"decreased uracil uptake","type":"exact"},{"name":"reduced uracil import","type":"exact"}],"termid":"FYPO:0005171"}


id: PR:000028936
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 hyperoxidized form in Schizosaccharomyces pombe. The oxidation occurs in under oxidative stress.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/HyperOx(C48)","pombase_gene_id":"SPCC576.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: peroxiredoxin tpx1 hyperoxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-tpx1/HyperOx+","type":"exact"},{"name":"tpx1/HyperOx(C48)","type":"exact"}],"termid":"PR:000028936"}


id: PBO:0081587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 514","termid":"PBO:0081587"}


id: PBO:0072897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR-related CTD associated factor 1","termid":"PBO:0072897"}


id: GO:0170009
data:
  {"annotated_genes":["SJAG_03710","SJAG_04991","SJAG_04370","SJAG_03170","SJAG_00053","SJAG_03416","SJAG_01305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100427,95457,86507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[103570,86996,103699,101882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140474"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together two membranes, either via membrane lipid binding or by interacting with a membrane protein, to establish or maintain membrane contact sites and mediate organelle exchange and communication.","definition_xrefs":["PMID:29858488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01305":null,"SJAG_03170":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"endoplasmic reticulum-organelle membrane tether activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170009","terms_by_termid":{"GO:0140474":null,"GO:0140506":null}}


id: GO:0008011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a pupa. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of pupal chitin-based cuticle","synonyms":[{"name":"structural constituent of pupal cuticle","type":"broad"}],"termid":"GO:0008011"}


id: GO:0097527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.","definition_xrefs":["PMID:20823910","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"necroptotic signaling pathway","synonyms":[{"name":"necroptosis signaling","type":"related"},{"name":"necroptosis signaling pathway","type":"exact"},{"name":"necroptotic signal transduction","type":"exact"},{"name":"necroptotic signalling pathway","type":"related"}],"termid":"GO:0097527"}


id: GO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein heavy chain (obsolete GO:0001687)","synonyms":[{"name":"cytoplasmic dynein heavy chain","type":"exact"}],"termid":"GO:0001687"}


id: PR:Q10312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6C3.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.09","synonyms":[{"name":"Spom972h-rpp40","type":"exact"}],"termid":"PR:Q10312"}


id: GO:0009218
data:
  {"annotated_genes":["SJAG_03676","SJAG_04709","SJAG_05024","SJAG_00197","SJAG_00885","SJAG_00779","SJAG_03708","SJAG_00694","SJAG_00533","SJAG_00412","SJAG_04665","SJAG_04713","SJAG_04354","SJAG_03164","SJAG_00964","SJAG_00444","SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[89482,107955,112759,85553,94566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[111610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[103302,88505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[66943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[96123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[89027,110953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[111611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[110007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"},{"annotations":[110955,88042,84570,89028,83583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[96125,89485,102557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04665":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleotide metabolism","type":"exact"}],"termid":"GO:0009218","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0006256":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046704":null,"GO:0046705":null}}


id: PBO:0091052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate homeostasis protein","termid":"PBO:0091052"}


id: GO:0060561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of an anatomical structure.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in morphogenesis","synonyms":[{"name":"apoptosis involved in development","type":"related"},{"name":"apoptosis involved in morphogenesis","type":"narrow"},{"name":"morphogenetic apoptosis","type":"related"}],"termid":"GO:0060561"}


id: FYPO:0002064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 3'-5'-exoribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"},{"relation_name":"is_a","term_name":"abolished ribonuclease activity","termid":"FYPO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished 3'-5'-exoribonuclease activity","synonyms":[{"name":"3'-5'-exoribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0002064"}


id: PBO:0017943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1 (predicted)","termid":"PBO:0017943"}


id: PBO:0089329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase, Coq3 variant","termid":"PBO:0089329"}


id: PBO:0051476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-66-1 (pseudogene)","termid":"PBO:0051476"}


id: GO:0007414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Separation of axons away from a bundle of axons known as a fascicle.","definition_xrefs":["GOC:dgh","ISBN:039751820X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonal defasciculation","synonyms":[{"name":"defasciculation of neuron","type":"related"}],"termid":"GO:0007414"}


id: GO:0097253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-hydroxybutyrate from one side of a membrane to the other. Beta-hydroxybutyrate is the conjugate base of (R)-3-hydroxybutyric acid.","definition_xrefs":["GOC:dsf","PMID:22302940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"beta-hydroxybutyrate transmembrane transporter activity","synonyms":[{"name":"(R)-3-hydroxybutyrate transmembrane transporter activity","type":"exact"},{"name":"3-hydroxybutanoic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097253"}


id: PBO:0060886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEPRO antisense RNA 1","termid":"PBO:0060886"}


id: PR:Q9P7B0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein STB3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.01","synonyms":[{"name":"Spom972h-SPBC1652.01","type":"exact"}],"termid":"PR:Q9P7B0"}


id: PBO:0069146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 397, pseudogene","termid":"PBO:0069146"}


id: MOD:01522
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 114 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01522"}


id: PBO:0089582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK family cell polarity protein kinase Pom1","termid":"PBO:0089582"}


id: GO:0009573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chloroplast, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast ribulose bisphosphate carboxylase complex","synonyms":[{"name":"chloroplast RubisCO complex","type":"exact"}],"termid":"GO:0009573"}


id: GO:1900318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"}


id: GO:0036204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18-al + NADP+ + 2 H2O. This is a two step reaction. The first step is: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18,18-diol + + NADP+ + H2O. The second step is a spontaneous reaction: abieta-7,13-dien-18,18-diol = abieta-7,13-dien-18-al + H2O.","definition_xrefs":["EC:1.14.14.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"abieta-7,13-dien-18-ol hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06354","MetaCyc:RXN-12799","RHEA:26221"],"termid":"GO:0036204"}


id: GO:1990874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell proliferation","synonyms":[{"name":"VSMC proliferation","type":"exact"},{"name":"vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1990874"}


id: GO:2001036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tongue muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle fiber differentiation","termid":"GO:1902810"},{"relation_name":"is_a","term_name":"regulation of tongue muscle cell differentiation","termid":"GO:2001035"},{"relation_name":"negatively_regulates","term_name":"tongue muscle cell differentiation","termid":"GO:0035981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tongue muscle cell differentiation","termid":"GO:2001036"}


id: PBO:0052880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-2","termid":"PBO:0052880"}


id: PR:Q9Y7N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grx3 gene.","definition_xrefs":["UniProtKB:Q9Y7N3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.06c","synonyms":[{"name":"Spom972h-grx3","type":"exact"}],"termid":"PR:Q9Y7N3"}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101082],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+. Acts on a number of sugar alcohols, including (but not limited to) L-iditol, D-glucitol, D-xylitol, and D-galactitol.","definition_xrefs":["EC:1.1.1.14","PMID:13373783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: PBO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 2","termid":"PBO:0044049"}


id: PBO:0090986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf3","termid":"PBO:0090986"}


id: PBO:0076330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYS1 golgi trafficking protein","termid":"PBO:0076330"}


id: GO:0009926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin in the stem from tip to base along the vector of gravity or basipetally.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"auxin polar transport","termid":"GO:0009926"}


id: PBO:0069793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1079, pseudogene","termid":"PBO:0069793"}


id: PBO:0046850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 12 pseudogene 1","termid":"PBO:0046850"}


id: PBO:0044475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP17A1 antisense RNA 1","termid":"PBO:0044475"}


id: PBO:0068475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 54, pseudogene","termid":"PBO:0068475"}


id: PBO:0004339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP assembly factor Naf1 (predicted)","termid":"PBO:0004339"}


id: GO:0009710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tropane alkaloids, compounds containing the 8-methyl-8-azabicyclo(3.2.1)octane ring system.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tropane alkaloid biosynthetic process","synonyms":[{"name":"tropane alkaloid anabolism","type":"exact"},{"name":"tropane alkaloid biosynthesis","type":"exact"},{"name":"tropane alkaloid formation","type":"exact"},{"name":"tropane alkaloid synthesis","type":"exact"}],"termid":"GO:0009710"}


id: PBO:0090475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1","termid":"PBO:0090475"}


id: PBO:0047095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 149 member A","termid":"PBO:0047095"}


id: PBO:0057522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 640","termid":"PBO:0057522"}


id: FYPO:0007081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and normally occurs as part of the first meiotic nuclear division, does not occur.","definition_xrefs":["PMID:31532702","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal initial meiotic spindle pole body separation in meiosis I","termid":"FYPO:0007080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abolished initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abolished initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abolished initial mitotic SPB separation in meiosis I","type":"exact"},{"name":"abolished meiotic spindle pole body separation during meiosis I","type":"exact"},{"name":"initial meiotic spindle pole body separation in meiosis I abolished","type":"exact"}],"termid":"FYPO:0007081"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: GO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal straight tubule over time, from its formation to the mature structure. The proximal straight tubule is the part of the descending limb that extends from the proximal convoluted tubule to the descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal straight tubule development","synonyms":[{"name":"S3 development","type":"exact"}],"termid":"GO:0072020"}


id: PR:O60135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcf1 gene.","definition_xrefs":["UniProtKB:O60135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.02","synonyms":[{"name":"Spom972h-lcf1","type":"exact"},{"name":"fatty acid activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60135"}


id: GO:1902171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tocopherol cyclase activity.","definition_xrefs":["GOC:TermGenie","PMID:23632854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tocopherol cyclase activity","termid":"GO:1902171"}


id: PBO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resistance_to_chemical_during_vegetative_growth","termid":"PBO:0031304"}


id: PBO:0090046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29","termid":"PBO:0090046"}


id: GO:0046000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of ecdysteroid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid secretion","termid":"GO:0007555"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"positively_regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ecdysteroid secretion","synonyms":[{"name":"activation of ecdysteroid secretion","type":"narrow"},{"name":"stimulation of ecdysteroid secretion","type":"narrow"},{"name":"up regulation of ecdysteroid secretion","type":"exact"},{"name":"up-regulation of ecdysteroid secretion","type":"exact"},{"name":"upregulation of ecdysteroid secretion","type":"exact"}],"termid":"GO:0046000"}


id: PBO:0068920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 163, pseudogene","termid":"PBO:0068920"}


id: PBO:0068275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASE11 and RNASE12 antisense RNA 1","termid":"PBO:0068275"}


id: PBO:0081259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 29, pseudogene","termid":"PBO:0081259"}


id: FYPO:0006506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during mitotic G1 phase","synonyms":[{"name":"normal RNA accumulation during mitotic G1 phase","type":"related"},{"name":"normal RNA level during G1 phase during vegetative growth","type":"exact"},{"name":"normal RNA level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"normal mRNA level during mitotic G1 phase","type":"narrow"},{"name":"normal transcript level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006506"}


id: PBO:0042325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule","termid":"PBO:0042325"}


id: PBO:0059269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L33","termid":"PBO:0059269"}


id: PBO:0073875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 3","termid":"PBO:0073875"}


id: PBO:0056113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase like 1","termid":"PBO:0056113"}


id: FYPO:0001712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular coenzyme Q10 level","termid":"FYPO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"coenzyme Q10 absent from cell","synonyms":[{"name":"UQ-10 absent from cell","type":"exact"},{"name":"coenzyme Q10 absent from cell during mitotic cell cycle","type":"related"},{"name":"coenzyme Q10 absent from cell during vegetative growth","type":"exact"},{"name":"ubiquinone 10 absent from cell","type":"exact"}],"termid":"FYPO:0001712"}


id: PBO:0086605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; non-essential gene; contains a PH-like domain; RBH2 has a paralog, RBH1, that arose from the whole genome duplication","termid":"PBO:0086605"}


id: GO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol-1-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["EC:3.1.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"glycerol-1-phosphatase activity","secondary_identifiers":["MetaCyc:GLYCEROL-1-PHOSPHATASE-RXN","RHEA:11476"],"synonyms":[{"name":"alpha-glycerol phosphatase activity","type":"related"},{"name":"alpha-glycerophosphatase activity","type":"related"},{"name":"glycerol 3-phosphatase activity","type":"related"},{"name":"glycerol 3-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-3-phosphate phosphatase activity","type":"related"}],"termid":"GO:0000121"}


id: PBO:0062140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 7 pseudogene","termid":"PBO:0062140"}


id: GO:0021920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of neuronal precursors to association neurons in the dorsal spinal cord.","definition_xrefs":["GOC:dph","GOC:jid","PMID:12593981","GO_REF:0000021","GOC:cls","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification (obsolete GO:0021920)","termid":"GO:0021920"}


id: PBO:0058516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5704","termid":"PBO:0058516"}


id: PBO:0086936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication","termid":"PBO:0086936"}


id: GO:0150155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-34 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:26754294","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-34 production","termid":"GO:0150155"}


id: PBO:0027923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_protein_aggregate_level","termid":"PBO:0027923"}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: PBO:0036033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_modification_during_vegetative_growth","termid":"PBO:0036033"}


id: PBO:0046178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II","termid":"PBO:0046178"}


id: GO:2000907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of glucomannan catabolic process","termid":"GO:2000898"},{"relation_name":"negatively_regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucomannan catabolic process","synonyms":[{"name":"negative regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000907"}


id: FYPO:0006453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a histone acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000641","FYPO:0000002","FYPO:0000652","FYPO:0000707","FYPO:0005447","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone acetyltransferase activity","synonyms":[{"name":"abnormal histone acetylase activity","type":"exact"}],"termid":"FYPO:0006453"}


id: GO:0009066
data:
  {"annotated_genes":["SJAG_03163","SJAG_03312","SJAG_04549","SJAG_03712","SJAG_00395","SJAG_00881","SJAG_03141","SJAG_03614","SJAG_02276","SJAG_02290","SJAG_03881","SJAG_00432","SJAG_01061","SJAG_00714","SJAG_00869","SJAG_02388","SJAG_00502","SJAG_03152","SJAG_02972","SJAG_04425","SJAG_02293","SJAG_00234","SJAG_01404","SJAG_01574","SJAG_02450","SJAG_00830","SJAG_04953","SJAG_00309","SJAG_04459","SJAG_04305","SJAG_03692","SJAG_04688","SJAG_01955","SJAG_03659","SJAG_04042","SJAG_02832","SJAG_00419","SJAG_03306","SJAG_01630","SJAG_03102","SJAG_01466","SJAG_03671","SJAG_02689","SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107130,64706,106549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[106838,98215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[107854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[102024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[91021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006528"},{"annotations":[107855,83965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[107856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[102025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006531"},{"annotations":[98216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[108110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[96720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[91642,96052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[95071,103047,85875,96706,108472,88722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[95072,88723,103048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[97251,97981,105744,86448,89050,92749,92426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009085"},{"annotations":[97982,89051,109495,86449,92427,94417,97252,105745,92750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[102027,111820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"},{"annotations":[107132,92714,98783,108009,111821,102028,99656,86125,94480,97945,94594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[106716,99450,108742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"},{"annotations":[111822,96889,102029,66919,108010,106717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[99837,90276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic 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family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aspartate family amino acid metabolism","type":"exact"}],"termid":"GO:0009066","terms_by_termid":{"GO:0006528":null,"GO:0006529":null,"GO:0006530":null,"GO:0006531":null,"GO:0006532":null,"GO:0006533":null,"GO:0006555":null,"GO:0006567":null,"GO:0009085":null,"GO:0009086":null,"GO:0009088":null,"GO:0009089":null,"GO:0019266":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0033512":null,"GO:0070981":null,"GO:0071266":null,"GO:1990355":null}}


id: GO:0046403
data:
  {"annotated_genes":["SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89773],"is_not":false,"summary":null,"term":"GO:0046403"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'end (2'-deoxyribonucleotide 3'-phosphate)-DNA + H2O = a 3'-end 2'-deoxyribonucleotide-DNA + phosphate.","definition_xrefs":["RHEA:14113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"polynucleotide 3'-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-3-PHOSPHATASE-RXN","Reactome:R-HSA-5649705","EC:3.1.3.32"],"synonyms":[{"name":"2'(3')-polynucleotidase activity","type":"related"},{"name":"5'-polynucleotidekinase 3'-phosphatase activity","type":"related"},{"name":"DNA 3'-phosphatase activity","type":"related"},{"name":"deoxyribonucleate 3'-phosphatase activity","type":"related"},{"name":"polynucleotide 3'-phosphohydrolase activity","type":"related"}],"termid":"GO:0046403","terms_by_termid":{"GO:0046403":null}}


id: GO:2000999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellulose catabolic process","termid":"GO:2000997"},{"relation_name":"positively_regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellulose catabolic process","synonyms":[{"name":"positive regulation of cellulose breakdown","type":"exact"},{"name":"positive regulation of cellulose catabolism","type":"exact"},{"name":"positive regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000999"}


id: PBO:0047111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 157 member D","termid":"PBO:0047111"}


id: PBO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0000979"}


id: PBO:0017061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, ASAP domain protein","termid":"PBO:0017061"}


id: PBO:0007272
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana gsh2","termid":"PBO:0007272"}


id: PBO:0066576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB like 1","termid":"PBO:0066576"}


id: GO:0009189
data:
  {"annotated_genes":["SJAG_04657","SJAG_02874","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88506,91563,103303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[114032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009189","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: PBO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPM1","termid":"PBO:0012262"}


id: PBO:0014602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase (predicted)","termid":"PBO:0014602"}


id: PBO:0049934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHIP antisense RNA 1","termid":"PBO:0049934"}


id: GO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracytoplasmic membrane-bounded compartment in anaerobic ammonium oxidation (anammox) bacteria, is the site of anammox catabolism.","definition_xrefs":["GOC:dh","PMID:17993524","PMID:19682260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"anammoxosome","termid":"GO:0044222"}


id: PBO:0084587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR080W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR081W","termid":"PBO:0084587"}


id: PBO:0042781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 112","termid":"PBO:0042781"}


id: PR:Q9P791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-sugar pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11839:SF1","PRO:DNx","OMA:SCHPO02666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Nudix hydrolase P35G2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.12","secondary_identifiers":["UniProtKB:Q9P791"],"synonyms":[{"name":"Spom972h-NUDT5","type":"exact"}],"termid":"PR:Q9P791"}


id: PBO:0066768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 66","termid":"PBO:0066768"}


id: FYPO:0003521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular L-ergothioneine level","synonyms":[{"name":"decreased L-ergothioneine level","type":"exact"},{"name":"decreased cellular L-ergothioneine accumulation","type":"related"},{"name":"reduced cellular L-ergothioneine level","type":"exact"}],"termid":"FYPO:0003521"}


id: SO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA","synonyms":[{"name":"C/D scaRNA","type":"exact"}],"termid":"SO:0002369"}


id: GO:0033217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of iron ions.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to iron ion starvation (obsolete GO:0033217)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter in response to iron deficiency","type":"exact"}],"termid":"GO:0033217"}


id: GO:1903054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["PMID:22357537","GOC:BHF","GOC:TermGenie","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix organization","synonyms":[{"name":"down regulation of extracellular matrix organisation","type":"exact"},{"name":"down regulation of extracellular matrix organization","type":"exact"},{"name":"down regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"down-regulation of extracellular matrix organisation","type":"exact"},{"name":"down-regulation of extracellular matrix organization","type":"exact"},{"name":"down-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"downregulation of extracellular matrix organisation","type":"exact"},{"name":"downregulation of extracellular matrix organization","type":"exact"},{"name":"downregulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"inhibition of extracellular matrix organisation","type":"narrow"},{"name":"inhibition of extracellular matrix organization","type":"narrow"},{"name":"inhibition of extracellular matrix organization and biogenesis","type":"related"},{"name":"negative regulation of extracellular matrix organisation","type":"exact"},{"name":"negative regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903054"}


id: GO:0033309
data:
  {"annotated_genes":["SJAG_00987","SJAG_00693","SJAG_02810","SJAG_03845"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89354,105228,107961,108133],"is_not":false,"summary":null,"term":"GO:0033309"}]},"cv_name":"cellular_component","definition":"A protein complex that binds to the Swi4/6 cell cycle box (SCB) promoter element, consensus sequence CRCGAAA, and activates transcription during the G1/S transition of the cell cycle. In Saccharomyces, the complex contains a heterodimer of the DNA binding protein Swi4p and the activator Swi6p, and is associated with additional proteins known as Whi5p and Msa1p.","definition_xrefs":["PMID:11206552","PMID:15838511","PMID:18160399","PMID:19150335","PMID:7917338","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00693":null,"SJAG_00987":null,"SJAG_02810":null,"SJAG_03845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"SBF transcription complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SBF complex","type":"exact"}],"termid":"GO:0033309","terms_by_termid":{"GO:0033309":null}}


id: PBO:0079690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 4A","termid":"PBO:0079690"}


id: GO:0045744
data:
  {"annotated_genes":["SJAG_01245","SJAG_00266","SJAG_02481","SJAG_02426","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[96493,112424,104013,88161,88815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"down-regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"downregulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"inhibition of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"negative regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signaling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0045744","terms_by_termid":{"GO:0106072":null,"GO:0110034":null}}


id: PR:Q92361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- xrc4 gene.","definition_xrefs":["UniProtKB:Q92361","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G9.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.16c","synonyms":[{"name":"Spom972h-xrc4","type":"exact"}],"termid":"PR:Q92361"}


id: GO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD81, a member of the tetraspan family.","definition_xrefs":["PMID:10229664","PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD81 complex","synonyms":[{"name":"ITGA4-ITGB1-CD81 complex","type":"narrow"}],"termid":"GO:0070520"}


id: GO:0042464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by an inactivation of a proportion of genes on both of the X chromosomes of the XX sex, leading to a decrease, of half, of the levels of gene expression from these chromosomes. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:jl","PMID:11102361","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"dosage compensation by hypoactivation of X chromosome","secondary_identifiers":["Wikipedia:XY_sex-determination_system"],"termid":"GO:0042464"}


id: GO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a methyl group from N-nitrosodimethylamine.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylnitrosamine demethylase activity (obsolete GO:0004162)","synonyms":[{"name":"N-nitrosodimethylamine demethylase activity","type":"exact"}],"termid":"GO:0004162"}


id: GO:0061078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell and contributes to the immune response.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of prostaglandin secretion","termid":"GO:0032308"},{"relation_name":"positively_regulates","term_name":"prostaglandin secretion involved in immune response","termid":"GO:0090323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin secretion involved in immune response","synonyms":[{"name":"positive regulation of prostaglandin secretion during immune response","type":"related"}],"termid":"GO:0061078"}


id: PBO:0089443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0089443"}


id: MOD:00339
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl hydrogenase diiron subcluster.","definition_xrefs":["PubMed:10694885","Unimod:439#C","PubMed:9836629","RESID:AA0334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl hydrogenase diiron subcluster","synonyms":[{"name":"1,7-biscarbonyl-1-(cystein-S-yl)-8-oxo-4-aza-2lambda(3),6 lambda(3)-dithia-1,7-diferratricyclo[4.2.0.0(2,7)]octane-1,7-dicarbonitrile","type":"exact"},{"name":"Diironsubcluster","type":"related"},{"name":"L-cysteinyl hydrogenase diiron subcluster","type":"exact"},{"name":"METAL Diiron subcluster","type":"exact"},{"name":"hydrogenase diiron subcluster","type":"related"},{"name":"mu-carbonyl-dicarbonyl-1kappaC,2kappaC-dicyanido-1kappaC,2kappaC-cysteinato-1kS-1,2-azadimethanthiol-1kS,2kS'-diiron","type":"exact"}],"termid":"MOD:00339"}


id: PBO:0063850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 3","termid":"PBO:0063850"}


id: MOD:00972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monobrominated L-phenylalanine, such as L-2'-bromophenylalanine.","definition_xrefs":["Unimod:340#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated L-phenylalanine","synonyms":[{"name":"Br1Phe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"bromination","type":"related"}],"termid":"MOD:00972"}


id: PBO:0030748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell","termid":"PBO:0030748"}


id: PBO:0083102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase and DNA-dependent ATPase; role in DNA repair and checkpoint recovery, in the proper timing of commitment to meiotic recombination and the Meiosis I to II transition; blocks trinucleotide repeat expansion; affects genome stability; disassembles Rad51p nucleoprotein filaments during meiotic recombination; stimulates Mus81p-Mms4p endonuclease activity independent of catalytic activity; ATPase and ssDNA translocating motor activities inhibited by Dmc1p; functional homolog of human RTEL1","termid":"PBO:0083102"}


id: PBO:0085083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear encoded protein needed for splicing of mitochondrial intron; required for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions","termid":"PBO:0085083"}


id: GO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic ribosomal RNA (obsolete GO:0005567)","synonyms":[{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"GO:0005567"}


id: PBO:0078544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 36","termid":"PBO:0078544"}


id: SO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_primary_transcript","synonyms":[{"name":"rRNA primary transcript","type":"exact"},{"name":"ribosomal RNA primary transcript","type":"exact"}],"termid":"SO:0000209"}


id: PBO:0064869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 2","termid":"PBO:0064869"}


id: PBO:0091193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro","termid":"PBO:0091193"}


id: PBO:0081763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF692 divergent transcript","termid":"PBO:0081763"}


id: GO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypyruvate + H+ = CO2 + glycolaldehyde.","definition_xrefs":["EC:4.1.1.40","RHEA:20561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"hydroxypyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01393","MetaCyc:HYDROXYPYRUVATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"hydroxypyruvate carboxy-lyase (glycolaldehyde-forming)","type":"related"},{"name":"hydroxypyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0047997"}


id: GO:0016484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Required for the maturation and activation of proprotein convertase 2.","definition_xrefs":["GOC:ma","PMID:10749852"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 2 activator activity (obsolete GO:0016484)","synonyms":[{"name":"proprotein convertase 2 activator activity","type":"exact"}],"termid":"GO:0016484"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: PBO:0086892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in the biotin biosynthesis; responsible for uptake of 7-keto 8-aminopelargonic acid; BIO5 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis","termid":"PBO:0086892"}


id: PBO:0073990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 4","termid":"PBO:0073990"}


id: PBO:0086759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; questionable ORF from MIPS","termid":"PBO:0086759"}


id: GO:1902902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagosome assembly.","definition_xrefs":["GOC:autophagy","PMID:21975012","GO_REF:0000058","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of autophagosome assembly","termid":"GO:2000785"},{"relation_name":"negatively_regulates","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044085","GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of autophagosome assembly","synonyms":[{"name":"down regulation of PAS formation","type":"narrow"},{"name":"down regulation of autophagic vacuole assembly","type":"exact"},{"name":"down regulation of autophagic vacuole formation","type":"related"},{"name":"down regulation of autophagosome biosynthesis","type":"exact"},{"name":"down regulation of autophagosome formation","type":"exact"},{"name":"down-regulation of PAS formation","type":"narrow"},{"name":"down-regulation of autophagic vacuole assembly","type":"exact"},{"name":"down-regulation of autophagic vacuole formation","type":"related"},{"name":"down-regulation of autophagosome biosynthesis","type":"exact"},{"name":"down-regulation of autophagosome formation","type":"exact"},{"name":"downregulation of PAS formation","type":"narrow"},{"name":"downregulation of autophagic vacuole assembly","type":"exact"},{"name":"downregulation of autophagic vacuole formation","type":"related"},{"name":"downregulation of autophagosome biosynthesis","type":"exact"},{"name":"downregulation of autophagosome formation","type":"exact"},{"name":"inhibition of PAS formation","type":"narrow"},{"name":"inhibition of autophagic vacuole assembly","type":"narrow"},{"name":"inhibition of autophagic vacuole formation","type":"related"},{"name":"inhibition of autophagosome biosynthesis","type":"narrow"},{"name":"inhibition of autophagosome formation","type":"narrow"},{"name":"negative regulation of PAS formation","type":"narrow"},{"name":"negative regulation of autophagic vacuole assembly","type":"exact"},{"name":"negative regulation of autophagic vacuole formation","type":"related"},{"name":"negative regulation of autophagosome biosynthesis","type":"exact"},{"name":"negative regulation of autophagosome formation","type":"exact"}],"termid":"GO:1902902"}


id: GO:1903463
data:
  {"annotated_genes":["SJAG_02074","SJAG_01210","SJAG_03160","SJAG_03048","SJAG_02162","SJAG_04671","SJAG_01068","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112885,104936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[104937,98426,93843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[99381,108078,113297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[98435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[95415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["PMID:1234","GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903463","terms_by_termid":{"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null}}


id: GO:0099624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across the plasma membrane of an atrial cardiac muscle cell such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"}


id: FYPO:0005488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenite ions. Cells stop growing (and may die) at a concentration of arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to arsenite","synonyms":[{"name":"hypersensitive to arsenite","type":"exact"},{"name":"sensitive to arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenite during vegetative growth","type":"exact"},{"name":"sensitive to arsenite ions","type":"exact"}],"termid":"FYPO:0005488"}


id: GO:0048256
data:
  {"annotated_genes":["SJAG_04183","SJAG_01648","SJAG_01173","SJAG_03994","SJAG_05237","SJAG_01044","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[100215,103806,93201,84515,99259,97223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01044":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flap endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048256","terms_by_termid":{"GO:0017108":null,"GO:0048257":null}}


id: PBO:0056956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19b-1","termid":"PBO:0056956"}


id: PBO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034580"}


id: RO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends with y if and only if the time point at which x ends is equivalent to the time point at which y ends. Formally: x existence ends with y iff ω(x) = ω(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during","termid":"RO:0002492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_with","termid":"RO:0002493"}


id: GO:1990672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a medial-Golgi-derived vesicle to the lipid bilayer membrane around the Golgi trans cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"medial-Golgi-derived vesicle fusion with Golgi trans cisterna membrane","termid":"GO:1990672"}


id: PBO:0042123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 196","termid":"PBO:0042123"}


id: PBO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorder of glycosylation","termid":"PBO:0017081"}


id: PR:Q9Y700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Tu 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Tu, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.04c","secondary_identifiers":["UniProtKB:Q9Y700"],"synonyms":[{"name":"Spom972h-tufB","type":"exact"}],"termid":"PR:Q9Y700"}


id: PBO:0013467
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of FLocculation","termid":"PBO:0013467"}


id: PBO:0068940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 183, pseudogene","termid":"PBO:0068940"}


id: PR:Q9US11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC607.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C607.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.07c","synonyms":[{"name":"Spom972h-SPAC607.07c","type":"exact"}],"termid":"PR:Q9US11"}


id: GO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transport","termid":"GO:0015759"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"salicin transport","termid":"GO:0042948"}


id: GO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of endothelial cell migration.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of endothelial cell migration (obsolete GO:0044328)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of endothelial cell migration","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of endothelial cell migration","type":"exact"}],"termid":"GO:0044328"}


id: PBO:0068844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 82, pseudogene","termid":"PBO:0068844"}


id: PBO:0061279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 like","termid":"PBO:0061279"}


id: PR:O42914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oga1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.08c","synonyms":[{"name":"Spom972h-oga1","type":"exact"}],"termid":"PR:O42914"}


id: PBO:0085327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol/phosphatidylcholine transfer protein; involved in regulating PtdIns, PtdCho, and ceramide metabolism, products of which regulate intracellular transport and UPR; has a role in localization of lipid raft proteins; functionally homologous to mammalian PITPs; SEC14 has a paralog, YKL091C, that arose from the whole genome duplication","termid":"PBO:0085327"}


id: PBO:0043144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 12","termid":"PBO:0043144"}


id: GO:0103058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol 3-O-glucoside + UDP-L-rhamnose = kaempferol-3-glucoside-7-rhamnoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"kaempferol 3-glucoside 7-O-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN1F-443"],"termid":"GO:0103058"}


id: PBO:0062630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 7 (gene/pseudogene)","termid":"PBO:0062630"}


id: GO:1904662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:1716172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"regulation of sensory perception of bitter taste","termid":"GO:1904660"},{"relation_name":"positively_regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory perception of bitter taste","synonyms":[{"name":"activation of bitter taste perception","type":"narrow"},{"name":"activation of sensory perception of bitter taste","type":"narrow"},{"name":"positive regulation of bitter taste perception","type":"exact"},{"name":"up regulation of bitter taste perception","type":"exact"},{"name":"up regulation of sensory perception of bitter taste","type":"exact"},{"name":"up-regulation of bitter taste perception","type":"exact"},{"name":"up-regulation of sensory perception of bitter taste","type":"exact"},{"name":"upregulation of bitter taste perception","type":"exact"},{"name":"upregulation of sensory perception of bitter taste","type":"exact"}],"termid":"GO:1904662"}


id: PBO:0082541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein; YDR134C has a paralog, CCW12, that arose from the whole genome duplication; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 67, which in other strains encodes glutamine","termid":"PBO:0082541"}


id: PBO:0063984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 18","termid":"PBO:0063984"}


id: FYPO:0003409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) is abnormal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PMID:24710126","PomBase:mah","GO:0034080","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin organization","termid":"FYPO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin assembly","synonyms":[{"name":"abnormal CENP-A containing nucleosome assembly","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"abnormal CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"abnormal CENP-A deposition","type":"related"},{"name":"abnormal CENP-A loading","type":"related"},{"name":"abnormal CenH3-containing nucleosome assembly","type":"related"},{"name":"abnormal DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"abnormal centromere-specific histone exchange","type":"exact"},{"name":"abnormal centromere-specific nucleosome assembly","type":"exact"},{"name":"abnormal centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003409"}


id: PBO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor","termid":"PBO:0002382"}


id: PBO:0038748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin family pseudogene 1","termid":"PBO:0038748"}


id: PBO:0081795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 725, pseudogene","termid":"PBO:0081795"}


id: PBO:0041039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 DNA repair associated","termid":"PBO:0041039"}


id: PBO:0062846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSTM1 antisense RNA 1","termid":"PBO:0062846"}


id: PBO:0011092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhytoCheletin Synthase","termid":"PBO:0011092"}


id: FYPO:0006819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells elongate at a normal (i.e. indistinguishable from wild type) rate during the vegetative growth phase of the life cycle. Cell growth is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah","GO:0016049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell growth","termid":"FYPO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal vegetative cell growth rate","termid":"FYPO:0006819"}


id: GO:0019650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into butanediol; effected by some members of the Enterobacteriaceae, e.g. Enterobacter, Erwinia, Klebsiella, and Serratia.","definition_xrefs":["GOC:nr","ISBN:0198506732","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"},{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"glycolytic fermentation to butanediol","secondary_identifiers":["Wikipedia:Butanediol_fermentation","GO:0030646","MetaCyc:P125-PWY"],"synonyms":[{"name":"butanediol fermentation","type":"exact"},{"name":"glucose catabolic process to butanediol","type":"exact"},{"name":"glucose fermentation to butanediol","type":"exact"}],"termid":"GO:0019650"}


id: PBO:0054537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1937","termid":"PBO:0054537"}


id: GO:0046232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbazole metabolic process","termid":"GO:0018884"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"carbazole catabolic process","synonyms":[{"name":"carbazole breakdown","type":"exact"},{"name":"carbazole catabolism","type":"exact"},{"name":"carbazole degradation","type":"exact"}],"termid":"GO:0046232"}


