# terms

id: GO:1904382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more alpha 1,2-linked mannose residues from a mannosylated protein that occurs as part of glycoprotein ER-associated glycoprotein degradation (gpERAD).","definition_xrefs":["GO_REF:0000060","PMID:24519966","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation involved in glycoprotein catabolic process","termid":"GO:0035977"},{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"},{"relation_name":"part_of","term_name":"ubiquitin-dependent glycoprotein ERAD pathway","termid":"GO:0097466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mannose trimming involved in glycoprotein ERAD pathway","synonyms":[{"name":"glycoprotein mannose trimming involved in ER-associated glycoprotein degradation","type":"related"},{"name":"glycoprotein mannose trimming involved in glycoprotein ERAD","type":"related"},{"name":"glycoprotein mannose trimming involved in glycoprotein ERAD pathway","type":"related"},{"name":"glycoprotein mannose trimming involved in gpERAD","type":"related"},{"name":"mannose trimming involved in misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"},{"name":"protein alpha-1,2-demannosylation involved in ER-associated glycoprotein degradation","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in glycoprotein ERAD","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in glycoprotein ERAD pathway","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in gpERAD","type":"exact"}],"termid":"GO:1904382"}


id: PBO:0067124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 169, pseudogene","termid":"PBO:0067124"}


id: PBO:0030662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcriptional_response_to_pheromone","termid":"PBO:0030662"}


id: FYECO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lauric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lauric acid","termid":"FYECO:0000067"}


id: PBO:0081052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 10","termid":"PBO:0081052"}


id: PBO:0034478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_single-stranded_telomeric_DNA_binding","termid":"PBO:0034478"}


id: PBO:0003749
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.50","termid":"PBO:0003749"}


id: PBO:0075879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 antisense RNA 1 (head to head)","termid":"PBO:0075879"}


id: PBO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member A","termid":"PBO:0048906"}


id: GO:0052557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont immune response (obsolete GO:0052557)","synonyms":[{"name":"positive regulation by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052557"}


id: FYPO:0006423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased in centromeric regions during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic sister chromatid cohesion at centromere","termid":"FYPO:0005579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"decreased meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"decreased meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"decreased sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0006423"}


id: GO:0019722
data:
  {"annotated_genes":["SJAG_01181","SJAG_04471","SJAG_02858","SJAG_02429","SJAG_03631","SJAG_03799","SJAG_04668","SJAG_04871","SJAG_04551","SJAG_03793","SJAG_03879","SJAG_03486","SJAG_00296","SJAG_03802","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84842,87294,88471,93731,94181,113401],"is_not":false,"summary":null,"term":"GO:0019722"},{"annotations":[114578,88469,94180,109402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097720"},{"annotations":[114226,112520,112185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"},{"annotations":[97045,112172],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106057"},{"annotations":[107021,98201],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01181":null,"SJAG_02429":null,"SJAG_02858":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03802":null,"SJAG_03879":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Calcium_signaling"],"synonyms":[{"name":"calcium ion signaling","type":"exact"},{"name":"calcium signaling","type":"exact"},{"name":"calcium signalling","type":"exact"},{"name":"calcium-mediated signalling","type":"exact"}],"termid":"GO:0019722","terms_by_termid":{"GO:0019722":null,"GO:0050850":null,"GO:0061762":null,"GO:0097720":null,"GO:0106057":null}}


id: PBO:0057656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1248","termid":"PBO:0057656"}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: RO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds via some process of localization","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_localization_to","termid":"RO:0002337"}


id: PBO:0079802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B17","termid":"PBO:0079802"}


id: GO:0072046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in nephron morphogenesis","type":"narrow"}],"termid":"GO:0072046"}


id: PBO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Ylf2 (predicted)","termid":"PBO:0001786"}


id: RO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an exposure event or process and any agent, stimulus, activity, or event that causally effects an organism and interacts with an exposure receptor during an exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_stimulus","termid":"RO:0002309"}


id: PBO:0004170
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present in a complex with Rlc1 and Cdc15","termid":"PBO:0004170"}


id: GO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hexyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"hexanoyltransferase activity","termid":"GO:0034327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"O-hexanoyltransferase activity","termid":"GO:0034324"}


id: PBO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1 (predicted)","termid":"PBO:0004826"}


id: GO:0039572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by stopping, preventing, or reducing the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT2 protein. For example, the measles virus V protein inhibits tyrosine phosphorylation of STAT2, thereby preventing STAT2 activation.","definition_xrefs":["PMID:12804771"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by negative regulation of STAT2 tyrosine phosphorylation (obsolete GO:0039572)","synonyms":[{"name":"inhibition by virus of tyrosine phosphorylation of STAT2","type":"exact"}],"termid":"GO:0039572"}


id: GO:0051635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a bacterial cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial cell surface binding (obsolete GO:0051635)","synonyms":[{"name":"bacterial binding","type":"exact"},{"name":"bacterial cell surface binding","type":"exact"},{"name":"bacterium binding","type":"exact"},{"name":"bacterium cell surface binding","type":"exact"},{"name":"binding to bacterium","type":"exact"}],"termid":"GO:0051635"}


id: PBO:0072986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scinderin","termid":"PBO:0072986"}


id: PBO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein Ima1","termid":"PBO:0005687"}


id: PBO:0053666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 844","termid":"PBO:0053666"}


id: PBO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase Fcp1","termid":"PBO:0002736"}


id: GO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing a cleistothecium, a closed sexual fruiting body that contains ascospores in linear asci. Cleistothecia are present in some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:30410052","PMID:28889020","PMID:20348388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium formation","termid":"GO:0062248"}


id: PBO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 4","termid":"PBO:0070774"}


id: GO:0099075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:PARL-UCL","GOC:bc","GOC:pad","PMID:20619655","PMID:37131163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}


id: PBO:0054457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1854","termid":"PBO:0054457"}


id: PBO:0075467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 18","termid":"PBO:0075467"}


id: GO:0044478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation, maintenance or an increase in the frequency, rate or extent of platelet aggregation in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of platelet aggregation in another organism","termid":"GO:0044365"},{"relation_name":"is_a","term_name":"envenomation resulting in positive regulation of blood coagulation in another organism","termid":"GO:0044469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of platelet aggregation in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0044478"}


id: GO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of putrescine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine acetylation","termid":"GO:0032920"}


id: PBO:0069038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 283, pseudogene","termid":"PBO:0069038"}


id: PBO:0042414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26","termid":"PBO:0042414"}


id: GO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of cyclin-dependent protein kinase 5 activator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase 5 activator regulator activity (obsolete GO:0016536)","synonyms":[{"name":"cyclin-dependent protein kinase 5 activator regulator activity","type":"exact"},{"name":"cyclin-dependent protein kinase 5 activator, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016536"}


id: PR:O43018
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC354.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C354.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.04","synonyms":[{"name":"Spom972h-SPBC354.04","type":"exact"}],"termid":"PR:O43018"}


id: GO:0007054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle during meiosis I of a meiotic cell cycle in males. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in male meiosis","termid":"GO:0007053"},{"relation_name":"part_of","term_name":"male meiosis I","termid":"GO:0007141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0140013","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"spindle assembly involved in male meiosis I","synonyms":[{"name":"male meiosis I spindle assembly","type":"related"}],"termid":"GO:0007054"}


id: GO:0032164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in hyphae of fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cap","termid":"GO:0032159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal septin cap","termid":"GO:0032164"}


id: SO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCCCTC, bound by the PKA-responsive zinc finger transcription factor Rst2.","definition_xrefs":["PMID:11739717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STREP_motif","synonyms":[{"name":"STREP motif","type":"related"},{"name":"stress-starvation response element of Schizosaccharomyces pombe","type":"exact"}],"termid":"SO:0001859"}


id: GO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: quaternary ammonium group(out) + H+(out) = quaternary ammonium group(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"quaternary ammonium group:proton symporter activity","synonyms":[{"name":"quaternary ammonium group:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015652"}


id: GO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-positive bacterium","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-positive bacteria","type":"exact"},{"name":"defence response to Gram-positive bacterium","type":"exact"},{"name":"defense response to Gram-positive bacteria","type":"exact"}],"termid":"GO:0050830"}


id: PBO:0068313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 1","termid":"PBO:0068313"}


id: PBO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt71","termid":"PBO:0001221"}


id: MOD:01921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to D-aspartic acid.","definition_xrefs":["ChEBI:48094","PubMed:9384562","RESID:AA0190#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"D-aspartic acid","termid":"MOD:01942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid (Asp)","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01921"}


id: PBO:0067065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 91, pseudogene","termid":"PBO:0067065"}


id: GO:0047450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-hydroxybutanoyl-[acyl-carrier-protein] = (2E)-butenoyl-[acyl-carrier-protein] + H2O.","definition_xrefs":["RHEA:41808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity","secondary_identifiers":["KEGG_REACTION:R04428","GO:0080063"],"synonyms":[{"name":"(3R)-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity","type":"exact"},{"name":"3-hydroxybutyryl acyl carrier protein dehydratase activity","type":"exact"},{"name":"beta-hydroxybutyryl acyl carrier protein (ACP) dehydrase activity","type":"exact"},{"name":"crotonoyl-ACP hydratase activity","type":"exact"},{"name":"crotonoyl-[acyl-carrier protein] hydratase activity","type":"exact"},{"name":"crotonoyl-[acyl-carrier-protein] hydratase activity","type":"exact"},{"name":"crotonoyl-acyl-carrier-protein hydratase activity","type":"exact"},{"name":"crotonyl acyl carrier protein hydratase activity","type":"exact"}],"termid":"GO:0047450"}


id: PBO:0042137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 1","termid":"PBO:0042137"}


id: GO:0006232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009194"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"TDP biosynthetic process","synonyms":[{"name":"TDP anabolism","type":"exact"},{"name":"TDP biosynthesis","type":"exact"},{"name":"TDP formation","type":"exact"},{"name":"TDP synthesis","type":"exact"}],"termid":"GO:0006232"}


id: PBO:0074175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 2","termid":"PBO:0074175"}


id: GO:0004618
data:
  {"annotated_genes":["SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99447],"is_not":false,"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + ATP = 3-phospho-D-glyceroyl phosphate + ADP + H+.","definition_xrefs":["EC:2.7.2.3","RHEA:14801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"phosphoglycerate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01512","Reactome:R-HSA-71850","Reactome:R-HSA-70486","MetaCyc:PHOSGLYPHOS-RXN"],"synonyms":[{"name":"3-PGK","type":"related"},{"name":"3-phosphoglycerate kinase activity","type":"related"},{"name":"3-phosphoglycerate phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric acid kinase activity","type":"related"},{"name":"3-phosphoglyceric acid phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric kinase activity","type":"related"},{"name":"ATP-3-phospho-D-glycerate-1-phosphotransferase activity","type":"related"},{"name":"ATP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-3-phosphoglycerate 1-phosphotransferase activity","type":"related"},{"name":"PGK","type":"related"},{"name":"glycerate 3-phosphate kinase activity","type":"related"},{"name":"glycerophosphate kinase activity","type":"related"},{"name":"phosphoglyceric acid kinase activity","type":"related"},{"name":"phosphoglyceric kinase activity","type":"related"},{"name":"phosphoglycerokinase activity","type":"related"}],"termid":"GO:0004618","terms_by_termid":{"GO:0004618":null}}


id: GO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formyl-L-methionyl peptide + H2O = formate + methionyl peptide.","definition_xrefs":["EC:3.5.1.88","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"peptide deformylase activity","secondary_identifiers":["MetaCyc:3.5.1.88-RXN","RHEA:24420"],"synonyms":[{"name":"PDF activity","type":"related"},{"name":"formyl-L-methionyl peptide amidohydrolase activity","type":"related"},{"name":"polypeptide deformylase activity","type":"related"}],"termid":"GO:0042586"}


id: GO:0047560
data:
  {"annotated_genes":["SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110829],"is_not":false,"summary":null,"term":"GO:0047560"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + sphinganine = 3-dehydrosphinganine + H+ + NADPH.","definition_xrefs":["RHEA:22640","EC:1.1.1.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-dehydrosphinganine reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02978","MetaCyc:3-DEHYDROSPHINGANINE-REDUCTASE-RXN","Reactome:R-HSA-428123"],"synonyms":[{"name":"3-ketosphinganine reductase activity","type":"related"},{"name":"3-oxosphinganine reductase activity","type":"related"},{"name":"3-oxosphinganine:NADPH oxidoreductase activity","type":"related"},{"name":"D-3-dehydrosphinganine reductase activity","type":"related"},{"name":"D-3-oxosphinganine reductase activity","type":"related"},{"name":"D-3-oxosphinganine:B-NADPH oxidoreductase activity","type":"related"},{"name":"D-erythro-dihydrosphingosine:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"DSR activity","type":"related"},{"name":"KTS reductase activity","type":"related"}],"termid":"GO:0047560","terms_by_termid":{"GO:0047560":null}}


id: GO:0010164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cesium ion","synonyms":[{"name":"response to cesium","type":"exact"}],"termid":"GO:0010164"}


id: PBO:0081615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 543","termid":"PBO:0081615"}


id: FYPO:0004044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"elongated tetranucleate vegetative cell","synonyms":[{"name":"elongated tetranucleate cells during vegetative growth","type":"exact"},{"name":"elongated tetranucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"long tetranucleate vegetative cell","type":"exact"}],"termid":"FYPO:0004044"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: FYPO:0004504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proteasome localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal proteasome localization","synonyms":[{"name":"normal proteasome localisation","type":"exact"},{"name":"normal proteasome localization during mitotic cell cycle","type":"related"},{"name":"normal proteasome localization during vegetative growth","type":"exact"},{"name":"normal proteasome location","type":"related"}],"termid":"FYPO:0004504"}


id: GO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ascorbate from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-198870"],"synonyms":[{"name":"L-ascorbate transporter activity","type":"exact"},{"name":"vitamin C transporter activity","type":"exact"}],"termid":"GO:0015229"}


id: PR:O74921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C757.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.11c","synonyms":[{"name":"Spom972h-SPCC757.11c","type":"exact"}],"termid":"PR:O74921"}


id: GO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"regulates","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil differentiation","termid":"GO:0045643"}


id: FYPO:0000314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and does not go on to give rise to a viable cell population.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination with abnormal germ tube morphology","termid":"FYPO:0002281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination with elongated germ tube","synonyms":[{"name":"inviable after spore germination, elongated cell","type":"exact"},{"name":"inviable following spore germination with elongated germ tube","type":"exact"},{"name":"inviable germinated spore with elongated germ tube","type":"exact"},{"name":"lethal after spore germination with elongated germ tube","type":"exact"}],"termid":"FYPO:0000314"}


id: PBO:0027174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_G418","termid":"PBO:0027174"}


id: PBO:0066690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of microtubule dynamics 1","termid":"PBO:0066690"}


id: PBO:0089697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, human NT5E family","termid":"PBO:0089697"}


id: PBO:0090945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps53","termid":"PBO:0090945"}


id: PBO:0046874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule D","termid":"PBO:0046874"}


id: PBO:0057879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3183","termid":"PBO:0057879"}


id: PBO:0056976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29a","termid":"PBO:0056976"}


id: GO:0036002
data:
  {"annotated_genes":["SJAG_02622","SJAG_04898","SJAG_03383","SJAG_03983","SJAG_00058","SJAG_00225","SJAG_03448","SJAG_01200","SJAG_04497","SJAG_04117","SJAG_03995","SJAG_00249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85194,92916,113243,114127],"is_not":false,"summary":null,"term":"GO:0036002"},{"annotations":[97301,99272,105598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030628"},{"annotations":[106704,109323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030627"},{"annotations":[64523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045131"},{"annotations":[114128,94092,96963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097157"}]},"cv_name":"molecular_function","definition":"Binding to a pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule.","definition_xrefs":["PMID:21901112","GOC:kmv","SO:0000120","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_01200":null,"SJAG_02622":null,"SJAG_03383":null,"SJAG_03448":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"pre-mRNA binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein-coding primary transcript binding","type":"related"}],"termid":"GO:0036002","terms_by_termid":{"GO:0030627":null,"GO:0030628":null,"GO:0036002":null,"GO:0045131":null,"GO:0097157":null}}


id: MOD:01277
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:11283024","Unimod:253#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site C","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01277"}


id: GO:2001272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043280"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","termid":"GO:2001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"positive regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001272"}


id: PBO:0077188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 12, pseudogene","termid":"PBO:0077188"}


id: GO:1990471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uni-strand piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs) that map predominantly to only one strand and exhibit hallmarks of canonical Pol II transcription. Uni-strand piRNA clusters are found in many taxa.","definition_xrefs":["PMID:24906153","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA cluster binding","termid":"GO:1990470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"piRNA uni-strand cluster binding","termid":"GO:1990471"}


id: PBO:0069167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 419, pseudogene","termid":"PBO:0069167"}


id: PBO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug147","termid":"PBO:0018085"}


id: GO:0097352
data:
  {"annotated_genes":["SJAG_02414","SJAG_03345","SJAG_06309","SJAG_02699","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85362,86178,109693],"is_not":false,"summary":null,"term":"GO:0097352"},{"annotations":[90699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[93692],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Removal of PI3P and Atg8/LC3 after the closure of the phagophore and before the fusion with the endosome/lysosome (e.g. mammals and insects) or vacuole (yeast), and that very likely destabilizes other Atg proteins and thus enables their efficient dissociation and recycling.","definition_xrefs":["PMID:28077293","GOC:lf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02414":null,"SJAG_02433":null,"SJAG_02699":null,"SJAG_03345":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000046"],"synonyms":[{"name":"autophagic vacuole fusion","type":"exact"},{"name":"autophagic vacuole maturation","type":"exact"},{"name":"autophagosome fusion","type":"related"}],"termid":"GO:0097352","terms_by_termid":{"GO:0016240":null,"GO:0097352":null,"GO:1901098":null}}


id: PATO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000282 f1 fertility (obsolete PATO:0000282)","termid":"PATO:0000282"}


id: PBO:0044210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin S","termid":"PBO:0044210"}


id: PBO:0086027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YBR259W is not an essential gene; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086027"}


id: PR:O94617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uap1 gene.","definition_xrefs":["UniProtKB:O94617","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.08","synonyms":[{"name":"Spom972h-uap1","type":"exact"}],"termid":"PR:O94617"}


id: PBO:0045794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial differentiation related factor 1","termid":"PBO:0045794"}


id: SO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer bound by a factor.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_factor","termid":"SO:0000277"},{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_bound_by_factor","synonyms":[{"name":"enhancer bound by factor","type":"exact"}],"termid":"SO:0000166"}


id: PBO:0054109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1474","termid":"PBO:0054109"}


id: GO:0036321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of ghrelin from a cell. Ghrelin is a 28 amino acid hunger-stimulating peptide hormone.","definition_xrefs":["GOC:cjm","PMID:14610293","Wikipedia:Ghrelin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ghrelin secretion","synonyms":[{"name":"pancreatic ghrelin secretion","type":"narrow"}],"termid":"GO:0036321"}


id: GO:0021883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) in a cell that has been committed to become a neuron that will reside in the forebrain.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:tb","GOC:dgh","PMID:16226447","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest of committed forebrain neuronal progenitor cell (obsolete GO:0021883)","termid":"GO:0021883"}


id: GO:0032326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor catabolic process","synonyms":[{"name":"Mo-molybdopterin cofactor breakdown","type":"exact"},{"name":"Mo-molybdopterin cofactor catabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor degradation","type":"exact"},{"name":"Moco catabolic process","type":"broad"},{"name":"Moco catabolism","type":"broad"}],"termid":"GO:0032326"}


id: PBO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 77","termid":"PBO:0042020"}


id: GO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of dopamine. from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, dopaminergic","synonyms":[{"name":"dopaminergic synaptic transmission","type":"exact"}],"termid":"GO:0001963"}


id: PBO:0080345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 109 pseudogene","termid":"PBO:0080345"}


id: PBO:0038734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: PBO:0089287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter","termid":"PBO:0089287"}


id: PBO:0059127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylpurine DNA glycosylase","termid":"PBO:0059127"}


id: PBO:0089849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18","termid":"PBO:0089849"}


id: PATO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in a bearer by virtue of the bearer's ability to convey electricity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electrical_conduction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conductivity","termid":"PATO:0001585"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electrical conductivity","termid":"PATO:0001757"}


id: GO:0002694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte activation","synonyms":[{"name":"regulation of immune cell activation","type":"exact"},{"name":"regulation of leucocyte activation","type":"exact"}],"termid":"GO:0002694"}


id: GO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hepoxilins, a class of bioactive icosanoids with roles in the regulation of cell physiology.","definition_xrefs":["PMID:15123652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"hepoxilin metabolic process","synonyms":[{"name":"hepoxilin metabolism","type":"exact"}],"termid":"GO:0051121"}


id: PBO:0082754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring, required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells; N-terminus interacts with phosphatidylinositol-4,5-bisphosphate; protein abundance increases under DNA damage stress","termid":"PBO:0082754"}


id: PBO:0065929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 3","termid":"PBO:0065929"}


id: PBO:0075892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5","termid":"PBO:0075892"}


id: GO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + penicillin N = CO2 + deacetoxycephalosporin C + H2O + succinate.","definition_xrefs":["RHEA:20748","EC:1.14.20.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"deacetoxycephalosporin-C synthase activity","secondary_identifiers":["KEGG_REACTION:R05301","MetaCyc:1.14.20.1-RXN","GO:0045441"],"synonyms":[{"name":"DAOC synthase activity","type":"related"},{"name":"DAOCS activity","type":"related"},{"name":"deacetoxycephalosporin C synthetase activity","type":"exact"},{"name":"expandase activity","type":"exact"},{"name":"penicillin N expandase activity","type":"related"},{"name":"penicillin-N,2-oxoglutarate:oxygen oxidoreductase (ring-expanding)","type":"related"}],"termid":"GO:0050599"}


id: PBO:0056141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor 2","termid":"PBO:0056141"}


id: PBO:0069610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 887, pseudogene","termid":"PBO:0069610"}


id: FYPO:0001112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000631","FYPO:0000257","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"premature cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"premature nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"advanced cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"advanced cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"advanced cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"premature cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"premature mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"premature mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0001112"}


id: PBO:0052052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1L antisense RNA 1","termid":"PBO:0052052"}


id: PBO:0065028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 4 pseudogene 2","termid":"PBO:0065028"}


id: PBO:0045526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTWD1 pseudogene 2","termid":"PBO:0045526"}


id: GO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal 1,4-beta-linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, exochitinases progressively cleave off two subunits from the reducing or non-reducing ends of the chitin chain.","definition_xrefs":["PMID:21390509","GOC:bf","PMID:11468293","GOC:pde","EC:3.2.1.-","GOC:kah","PMID:16298970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitinase activity","termid":"GO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"exochitinase activity","secondary_identifiers":["MetaCyc:RXN-12309","RHEA:50672"],"termid":"GO:0035885"}


id: PBO:0072823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1","termid":"PBO:0072823"}


id: GO:0097365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens in response to a mechanical stress in the form of stretching, and contributing to the regulation of action potential in a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:21290758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stretch-activated, monoatomic cation-selective, calcium channel activity involved in regulation of action potential","termid":"GO:0097364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"stretch-activated, monoatomic cation-selective, calcium channel activity involved in regulation of cardiac muscle cell action potential","synonyms":[{"name":"stretch-activated, cation-selective, calcium channel activity involved in regulation of cardiac muscle cell action potential","type":"broad"}],"termid":"GO:0097365"}


id: PBO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 helical C-terminal domain containing 1","termid":"PBO:0042972"}


id: PBO:0054019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1349","termid":"PBO:0054019"}


id: PBO:0034350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_kinase_activity","termid":"PBO:0034350"}


id: PR:O14105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31G5.05c gene.","definition_xrefs":["UniProtKB:O14105","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.05c","synonyms":[{"name":"PPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC31G5.05c","type":"exact"},{"name":"pentose-5-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14105"}


id: PBO:0059327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S2","termid":"PBO:0059327"}


id: PBO:0081243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 12","termid":"PBO:0081243"}


id: PBO:0058778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7112","termid":"PBO:0058778"}


id: PBO:0028350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_anaphase_B","termid":"PBO:0028350"}


id: PBO:0049706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 1","termid":"PBO:0049706"}


id: PBO:0110562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane myo-inositol transmembrane transporter","termid":"PBO:0110562"}


id: GO:0006265
data:
  {"annotated_genes":["SJAG_03567","SJAG_02394","SJAG_05193","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100468,100667,102228,109221],"is_not":false,"summary":null,"term":"GO:0006265"}]},"cv_name":"biological_process","definition":"The process in which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number.","definition_xrefs":["ISBN:071673706X","ISBN:0935702490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"DNA conformation change","termid":"GO:0071103"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02394":null,"SJAG_03567":null,"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA topological change","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA underwinding","type":"narrow"}],"termid":"GO:0006265","terms_by_termid":{"GO:0006265":null}}


id: PBO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_respiration","termid":"PBO:0031646"}


id: FYPO:0000446
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"mitotic G2 phase arrest","type":"related"},{"name":"mitotic G2/M phase transition arrest","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic cell cycle progression at mitotic G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000446","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0064919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3B","termid":"PBO:0064919"}


id: GO:2000556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell cytokine production","termid":"GO:0002726"},{"relation_name":"is_a","term_name":"positive regulation of T-helper 1 type immune response","termid":"GO:0002827"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell cytokine production","termid":"GO:2000554"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell cytokine production","termid":"GO:0035744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell cytokine production","synonyms":[{"name":"positive regulation of Th1 cell cytokine production","type":"exact"}],"termid":"GO:2000556"}


id: FYPO:0002464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis, elongated, and branched (and septated). Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, branched, curved, elongated cells (obsolete FYPO:0002464)","synonyms":[{"name":"inviable microcolony, branched, curved, elongated, septated vegetative cells","type":"exact"},{"name":"inviable microcolony, curved, branched, elongated cells","type":"exact"}],"termid":"FYPO:0002464"}


id: FYECO:0000058
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mating pheromone (M factor and P factor) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mating pheromone","termid":"FYECO:0000058"}


id: PBO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_C-shaped_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034646"}


id: GO:0055113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"epiboly","termid":"GO:0090504"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}


id: GO:0120193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["GOC:rl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tight junction organization","synonyms":[{"name":"occluding cell junction organization","type":"exact"},{"name":"occluding junction organization","type":"exact"}],"termid":"GO:0120193"}


id: PBO:0043860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRADD pseudogene 1","termid":"PBO:0043860"}


id: GO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of snoRNA class molecule (referred to as an sRNA in Archaea). In eukaryotes, this occurs in conjunction with termination of transcription of precursor snoRNA molecules and may occur post-transcriptionally on incorrectly processed molecules targeted for degradation.","definition_xrefs":["GOC:dgf","PMID:18951092","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete sno(s)RNA polyadenylation (obsolete GO:0071050)","synonyms":[{"name":"sRNA polyadenylation","type":"narrow"},{"name":"snoRNA polyadenylation","type":"narrow"}],"termid":"GO:0071050"}


id: GO:2000252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of feeding behavior.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"negatively_regulates","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of feeding behavior","synonyms":[{"name":"negative regulation of behavioral response to food","type":"exact"},{"name":"negative regulation of behavioural response to food","type":"exact"},{"name":"negative regulation of drinking","type":"related"},{"name":"negative regulation of eating","type":"related"},{"name":"negative regulation of feeding behaviour","type":"exact"}],"termid":"GO:2000252"}


id: PBO:0059794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 20","termid":"PBO:0059794"}


id: PBO:0111908
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SLC5A family","termid":"PBO:0111908"}


id: FYPO:0002166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 3'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished polynucleotide 3'-phosphatase activity","synonyms":[{"name":"polynucleotide 3'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002166"}


id: PBO:0059000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated B","termid":"PBO:0059000"}


id: GO:1901891
data:
  {"annotated_genes":["SJAG_01188","SJAG_00229","SJAG_02645","SJAG_00514","SJAG_03508","SJAG_04943","SJAG_03704","SJAG_00082","SJAG_00883","SJAG_04455","SJAG_02514","SJAG_06270","SJAG_03592","SJAG_04666","SJAG_03936","SJAG_04776","SJAG_02169","SJAG_00526","SJAG_03342","SJAG_01805","SJAG_01386","SJAG_04468","SJAG_01114","SJAG_03353","SJAG_03581","SJAG_03048","SJAG_03681","SJAG_05290","SJAG_04509","SJAG_01790","SJAG_04597","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[111943,103276,106217,95722,86819,95642,97325,91718,88905,87801,101069,103586,88987,89527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[111504,113904,109408,103088,85343,88487,101212,89875,102417,85968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[88488,90487,83653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[86100,89879,98442,106569,83654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[76989,88492,90653,84016,85970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032955"},{"annotations":[113905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell septum assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell septum assembly","termid":"GO:0090529"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1901891","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0032955":null,"GO:0140279":null,"GO:0140281":null,"GO:1905757":null,"GO:1905758":null}}


id: PBO:0066614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 2B","termid":"PBO:0066614"}


id: GO:0099529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occurring in the postsynaptic membrane that is involved in regulating postsynaptic membrane potential, either directly (ionotropic receptors) or indirectly (e.g. via GPCR activation of an ion channel).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}


id: GO:0047616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = 2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["MetaCyc:ACYL-COA-DEHYDROGENASE-NADP+-RXN","EC:1.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:22460"],"synonyms":[{"name":"2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"crotonyl coenzyme A reductase activity","type":"related"},{"name":"dehydrogenase, acyl coenzyme A (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"enoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0047616"}


id: GO:0004132
data:
  {"annotated_genes":["SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104424],"is_not":false,"summary":null,"term":"GO:0004132"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dCMP + H2O = dUMP + NH3.","definition_xrefs":["EC:3.5.4.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"dCMP deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73596","RHEA:22924","MetaCyc:DCMP-DEAMINASE-RXN"],"synonyms":[{"name":"dCMP aminohydrolase activity","type":"related"},{"name":"deoxy-CMP-deaminase activity","type":"related"},{"name":"deoxycytidine monophosphate deaminase activity","type":"related"},{"name":"deoxycytidine-5'-monophosphate aminohydrolase activity","type":"related"},{"name":"deoxycytidine-5'-phosphate deaminase activity","type":"related"},{"name":"deoxycytidylate aminohydrolase activity","type":"related"},{"name":"deoxycytidylate deaminase activity","type":"related"}],"termid":"GO:0004132","terms_by_termid":{"GO:0004132":null}}


id: GO:0036271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylphenidate stimulus.","definition_xrefs":["Wikipedia:Methylphenidate","GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylphenidate","synonyms":[{"name":"response to MPD","type":"exact"},{"name":"response to MPH","type":"exact"},{"name":"response to ritalin","type":"exact"}],"termid":"GO:0036271"}


id: PBO:0041837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 17","termid":"PBO:0041837"}


id: PBO:0084728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein required for complex IV assembly; associates with complex IV assembly intermediates and complex III/complex IV supercomplexes; similar to human SURF1 involved in Leigh Syndrome; complex IV is also known as cytochrome c oxidase","termid":"PBO:0084728"}


id: PBO:0084598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL158W was originally annotated as an independent ORF, but was later demonstrated to be an exon of an adjacent ORF, YKL157W","termid":"PBO:0084598"}


id: PBO:0003197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 methyltransferase Clr4","termid":"PBO:0003197"}


id: PBO:0039253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member B1","termid":"PBO:0039253"}


id: PBO:0071786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribophorin II","termid":"PBO:0071786"}


id: PBO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor serpin domain containing","termid":"PBO:0050283"}


id: GO:0042716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment-bearing structure that is derived from the cytoplasmic membrane, sometimes consisting of simple invaginations and sometimes a complete vesicle. This component is found in certain photosynthetic bacteria and cyanobacteria.","definition_xrefs":["PMID:11867431","GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plasma membrane-derived chromatophore","synonyms":[{"name":"chromatophore vesicle","type":"related"}],"termid":"GO:0042716"}


id: PBO:0059786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 12","termid":"PBO:0059786"}


id: GO:1900979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"positively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tatiopterin metabolic process","synonyms":[{"name":"activation of tatiopterin metabolic process","type":"narrow"},{"name":"activation of tatiopterin metabolism","type":"exact"},{"name":"positive regulation of tatiopterin metabolism","type":"exact"},{"name":"up regulation of tatiopterin metabolic process","type":"exact"},{"name":"up regulation of tatiopterin metabolism","type":"exact"},{"name":"up-regulation of tatiopterin metabolic process","type":"exact"},{"name":"up-regulation of tatiopterin metabolism","type":"exact"},{"name":"upregulation of tatiopterin metabolic process","type":"exact"},{"name":"upregulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900979"}


id: GO:1900262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"regulation of DNA duplicase activity","type":"exact"},{"name":"regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of DNA polymerase I","type":"narrow"},{"name":"regulation of DNA polymerase II","type":"narrow"},{"name":"regulation of DNA polymerase III","type":"narrow"},{"name":"regulation of DNA polymerase V activity","type":"narrow"},{"name":"regulation of DNA polymerase alpha","type":"narrow"},{"name":"regulation of DNA polymerase beta","type":"narrow"},{"name":"regulation of DNA polymerase gamma","type":"narrow"},{"name":"regulation of DNA replicase activity","type":"exact"},{"name":"regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"regulation of Klenow fragment","type":"narrow"},{"name":"regulation of Taq DNA polymerase","type":"narrow"},{"name":"regulation of Taq Pol I","type":"narrow"},{"name":"regulation of Tca DNA polymerase","type":"narrow"},{"name":"regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"regulation of beta DNA polymerase activity","type":"narrow"},{"name":"regulation of delta DNA polymerase activity","type":"narrow"},{"name":"regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"regulation of duplicase","type":"broad"},{"name":"regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"regulation of eta DNA polymerase activity","type":"narrow"},{"name":"regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"regulation of iota DNA polymerase activity","type":"narrow"},{"name":"regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"regulation of mu DNA polymerase activity","type":"narrow"},{"name":"regulation of nu DNA polymerase activity","type":"narrow"},{"name":"regulation of sequenase","type":"related"},{"name":"regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"regulation of theta DNA polymerase activity","type":"narrow"},{"name":"regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900262"}


id: FYPO:0004711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more translation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PMID:18203864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of translation gene mRNA during vegetative growth","termid":"FYPO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of translation gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of translation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of translation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of translation gene transcripts during vegetative growth","type":"exact"},{"name":"decreased translation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of translation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004711"}


id: PBO:0088466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 family DNAJ domain protein Mas5","termid":"PBO:0088466"}


id: GO:0004757
data:
  {"annotated_genes":["SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104568],"is_not":false,"summary":null,"term":"GO:0004757"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: 7,8-dihydrobiopterin + NADP+ = sepiapterin + NADPH + H+ and (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin + 2 NADP+ = 6-pyruvoyl-5,6,7,8-tetrahydropterin + 2 H+ + 2 NADPH.","definition_xrefs":["EC:1.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sepiapterin reductase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1475414","Reactome:R-HSA-1497869","MetaCyc:SEPIAPTERIN-REDUCTASE-RXN"],"synonyms":[{"name":"7,8-dihydrobiopterin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004757","terms_by_termid":{"GO:0004757":null}}


id: PBO:0056153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage immunometabolism regulator","termid":"PBO:0056153"}


id: PBO:0065001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 7","termid":"PBO:0065001"}


id: FYPO:0006668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during G0 phase in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear morphology during G0","synonyms":[{"name":"normal nuclear morphology during cell quiescence","type":"exact"},{"name":"normal nuclear morphology during quiescence","type":"exact"}],"termid":"FYPO:0006668"}


id: FYPO:0003744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromere during vegetative growth","termid":"FYPO:0000634"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"abolished protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere during vegetative growth","type":"exact"},{"name":"protein localization to centromeric chromatin during vegetative growth abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003744"}


id: FYPO:0002557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is decreased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to medial cortex during vegetative growth","synonyms":[{"name":"decreased protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial ring during vegetative growth","type":"exact"},{"name":"reduced protein localization to medial cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0002557"}


id: GO:2000176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"positively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of pro-T cell differentiation","synonyms":[{"name":"positive regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000176"}


id: GO:0047651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bromochloromethane + H2O = bromide + chloride + formaldehyde + 2 H+.","definition_xrefs":["RHEA:13765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alkylhalidase activity","secondary_identifiers":["KEGG_REACTION:R03523"],"synonyms":[{"name":"alkyl-halide halidohydrolase activity","type":"related"},{"name":"haloalkane halidohydrolase activity","type":"related"},{"name":"halogenase activity","type":"related"}],"termid":"GO:0047651"}


id: MOD:00000
data:
  {"annotated_genes":["SJAG_02592","SJAG_04551","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115442,115443,115210,115209,115208,115207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[115121,115123,115115,115099,115122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue.","definition_xrefs":["PubMed:18688235"],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_04551":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"synonyms":[{"name":"ModRes","type":"exact"}],"termid":"MOD:00000","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00046":null,"MOD:00696":null}}


id: GO:0055043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxovalerate + NADP+ + H2O = glutarate + NADPH + H+.","definition_xrefs":["GOC:mlg","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5-oxovalerate dehydrogenase activity","termid":"GO:0055043"}


id: PBO:0068497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 82, pseudogene","termid":"PBO:0068497"}


id: PBO:0031098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_checkpoint_required_(obsolete_FYPO:0000275)","termid":"PBO:0031098"}


id: PATO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that has been constantly realizing some of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active","termid":"PATO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutively active","termid":"PATO:0002356"}


id: GO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the peptide nociceptin, and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["PMID:18670432","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"nociceptin receptor activity","synonyms":[{"name":"OFQ receptor activity","type":"exact"},{"name":"ORPH receptor","type":"exact"},{"name":"X-opioid receptor activity","type":"related"},{"name":"nociceptin/orphanin-FQ receptor activity","type":"exact"},{"name":"orphanin-FQ receptor activity","type":"exact"}],"termid":"GO:0001626"}


id: GO:0098770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the FBXO protein family. Members of this family have an F-box protein motif of approximately 50 amino acids that functions as a site of protein-protein interaction.","definition_xrefs":["PMID:11178263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"FBXO family protein binding","termid":"GO:0098770"}


id: FYPO:0004275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of positive regulation of transcription is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal positive regulation of transcription during G0","synonyms":[{"name":"abnormal activation of gene-specific transcription during G0","type":"related"},{"name":"abnormal activation of transcription, DNA-dependent, during G0","type":"narrow"},{"name":"abnormal positive regulation of cellular transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal positive regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal positive regulation of transcription during cell quiescence","type":"exact"},{"name":"abnormal positive regulation of transcription during quiescence","type":"exact"},{"name":"abnormal positive regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal stimulation of gene-specific transcription during G0","type":"narrow"},{"name":"abnormal stimulation of transcription, DNA-dependent, during G0","type":"narrow"},{"name":"abnormal up regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal up regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal up-regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal up-regulation of transcription, DNA-dependent during G0","type":"exact"},{"name":"abnormal upregulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal upregulation of transcription, DNA-dependent, during G0","type":"exact"}],"termid":"FYPO:0004275"}


id: GO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric capsule from unspecified parts. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule formation","termid":"GO:0072129"},{"relation_name":"part_of","term_name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule formation","termid":"GO:0061287"}


id: PBO:0057410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548l","termid":"PBO:0057410"}


id: PBO:0053376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 302","termid":"PBO:0053376"}


id: PBO:0046472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBIN divergent transcript","termid":"PBO:0046472"}


id: PBO:0028040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_equatorial_microtubule_organizing_center_absent_from_cell","termid":"PBO:0028040"}


id: PBO:0012836
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens KRAS","termid":"PBO:0012836"}


id: PBO:0077123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 2","termid":"PBO:0077123"}


id: GO:0140372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of one or more ubiquitin groups.","definition_xrefs":["PMID:31468675","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 ubiquitination (obsolete GO:0140372)","synonyms":[{"name":"histone H3 ubiquitylation","type":"exact"}],"termid":"GO:0140372"}


id: PBO:0054341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1734","termid":"PBO:0054341"}


id: SO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylpseudouridine","secondary_identifiers":["RNAMOD:055"],"synonyms":[{"name":"1-methylpseudouridine","type":"exact"},{"name":"m1Y","type":"exact"},{"name":"one methylpseudouridine","type":"exact"}],"termid":"SO:0001347"}


id: PBO:0029904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_localization_phenotype","termid":"PBO:0029904"}


id: PBO:0046430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B6","termid":"PBO:0046430"}


id: PBO:0057118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203a","termid":"PBO:0057118"}


id: FYPO:0002422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, have an abnormal shape and undergo one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, single or double cell division, abnormal cell shape (obsolete FYPO:0002422)","synonyms":[{"name":"inviable germinated spore population, single or double cell division, abnormal cell shape","type":"exact"},{"name":"inviable population of germinated spores, single or double cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002422"}


id: GO:0044068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the execution of a cellular process in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"},{"relation_name":"regulates","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cellular process","synonyms":[{"name":"modulation by symbiont of host cellular process","type":"exact"},{"name":"modulation of host cellular process by symbiont","type":"exact"},{"name":"regulation by symbiont of host cellular process","type":"exact"},{"name":"regulation of host cellular process by symbiont","type":"exact"}],"termid":"GO:0044068"}


id: PBO:0068579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 30, pseudogene","termid":"PBO:0068579"}


id: PBO:0055444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2875","termid":"PBO:0055444"}


id: PBO:0049720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 5","termid":"PBO:0049720"}


id: GO:0008310
data:
  {"annotated_genes":["SJAG_05373","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84673,103400],"is_not":false,"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:22562358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-DNA exonuclease activity","termid":"GO:0008296"},{"relation_name":"is_a","term_name":"single-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02908":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0004527","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA 3'-5' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.11.1-RXN","EC:3.1.11.1"],"synonyms":[{"name":"exonuclease I activity","type":"narrow"},{"name":"single-stranded DNA 3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific 3'-5' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008310","terms_by_termid":{"GO:0008310":null}}


id: GO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Adjustment of Photosystem I/Photosystem II ratio in response to light conditions. The function of photosystem stoichiometry adjustment is to compensate for any deficiency in energy conversion at either photosystem I or photosystem II by increasing the quantity the photosystem that will otherwise become the rate-limiting to overall photosynthesis.","definition_xrefs":["PMID:11607105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosystem stoichiometry adjustment","termid":"GO:0080005"}


id: GO:1900896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane metabolic process","termid":"GO:1900899"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heptadecane biosynthetic process","synonyms":[{"name":"regulation of heptadecane anabolism","type":"exact"},{"name":"regulation of heptadecane biosynthesis","type":"exact"},{"name":"regulation of heptadecane formation","type":"exact"},{"name":"regulation of heptadecane synthesis","type":"exact"}],"termid":"GO:1900896"}


id: GO:0052354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of carbohydrate in other organism involved in symbiotic interaction (obsolete GO:0052354)","synonyms":[{"name":"catabolism by organism of carbohydrate in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052354"}


id: PBO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_formation","termid":"PBO:0031236"}


id: FYPO:0002898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"abolished protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002898"}


id: FYPO:0000651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of septum assembly","secondary_identifiers":["FYPO:0000649"],"synonyms":[{"name":"increased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"increased duration of division septum assembly","type":"exact"},{"name":"increased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of septation","type":"broad"},{"name":"increased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"increased duration of septum assembly during vegetative growth","type":"exact"},{"name":"increased duration of septum formation","type":"broad"},{"name":"increased septation","type":"related"},{"name":"increased septum formation","type":"related"},{"name":"prolonged septum assembly","type":"exact"}],"termid":"FYPO:0000651"}


id: SO:1000072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect that changes the splice donor sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000072 sequence_variant_affecting_splice_donor (obsolete SO:1000072)","synonyms":[{"name":"mutation affecting splice donor","type":"related"},{"name":"sequence variant affecting splice donor","type":"related"},{"name":"splice donor mutation","type":"exact"}],"termid":"SO:1000072"}


id: GO:0051039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription as part of a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in meiotic cell cycle (obsolete GO:0051039)","synonyms":[{"name":"activation of transcription during meiosis","type":"narrow"},{"name":"positive regulation of meiotic transcription","type":"exact"},{"name":"positive regulation of transcription, meiotic","type":"exact"},{"name":"stimulation of transcription during meiosis","type":"narrow"},{"name":"up regulation of transcription during meiosis","type":"exact"},{"name":"up-regulation of transcription during meiosis","type":"exact"},{"name":"upregulation of transcription during meiosis","type":"exact"}],"termid":"GO:0051039"}


id: GO:0000511
data:
  {"annotated_genes":["SJAG_02035","SJAG_02416","SJAG_02314","SJAG_03128","SJAG_00942"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94218,104151,107313,107314,109654,109655,112941],"is_not":false,"summary":null,"term":"GO:0000511"}]},"cv_name":"molecular_function","definition":"A histone chaperone that carries a H2A-H2B histone complex.","definition_xrefs":["PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00942":null,"SJAG_02035":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_03128":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0140104","GO:0003674","GO:0140597"],"is_obsolete":false,"name":"H2A-H2B histone complex chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H2A-H2B histone carrier activity","type":"exact"}],"termid":"GO:0000511","terms_by_termid":{"GO:0000511":null}}


id: GO:0002696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of leukocyte activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte activation","synonyms":[{"name":"activation of leukocyte activation","type":"narrow"},{"name":"positive regulation of immune cell activation","type":"exact"},{"name":"positive regulation of leucocyte activation","type":"exact"},{"name":"stimulation of leukocyte activation","type":"narrow"},{"name":"up regulation of leukocyte activation","type":"exact"},{"name":"up-regulation of leukocyte activation","type":"exact"},{"name":"upregulation of leukocyte activation","type":"exact"}],"termid":"GO:0002696"}


id: GO:0033125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of GTP catabolic process (obsolete GO:0033125)","synonyms":[{"name":"negative regulation of GTP breakdown","type":"exact"},{"name":"negative regulation of GTP catabolism","type":"exact"},{"name":"negative regulation of GTP degradation","type":"exact"}],"termid":"GO:0033125"}


id: PBO:0036248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ4","termid":"PBO:0036248"}


id: PBO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 7","termid":"PBO:0048444"}


id: PBO:0090326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein Sro7","termid":"PBO:0090326"}


id: PBO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit","termid":"PBO:0090261"}


id: PBO:0063740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 5","termid":"PBO:0063740"}


id: FYPO:0008064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after phosphate removal.","definition_xrefs":["PMID:36779416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased mating efficiency during phosphate starvation","termid":"FYPO:0008064"}


id: PBO:0024863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf1 (predicted)","termid":"PBO:0024863"}


id: PBO:0080592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 19","termid":"PBO:0080592"}


id: GO:0097712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles formed at the trans-Golgi network are directed to the plasma membrane surrounding the base of the cilium, including the ciliary pocket, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["GOC:cilia","PMID:20106869","PMID:23351793","PMID:24814148","PMID:26485645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting, trans-Golgi to periciliary membrane compartment","termid":"GO:0097712"}


id: GO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete G-protein receptor 45-like receptor activity (obsolete GO:0001629)","synonyms":[{"name":"G protein receptor 45-like receptor activity","type":"exact"},{"name":"G-protein receptor 45-like receptor activity","type":"exact"},{"name":"GPR45-like receptor","type":"exact"}],"termid":"GO:0001629"}


id: GO:1905430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:18984164","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glycine","termid":"GO:1905429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glycine","synonyms":[{"name":"cellular response to Gly","type":"exact"},{"name":"cellular response to aminoacetic acid","type":"exact"},{"name":"cellular response to aminoethanoic acid","type":"exact"},{"name":"cellular response to glycin","type":"exact"}],"termid":"GO:1905430"}


id: GO:0061765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a non-canonical NF-kappaB signaling cascade in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26764146","GOC:bc","GOC:BHF","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host non-canonical NF-kappaB signal transduction (obsolete GO:0061765)","synonyms":[{"name":"modulation by virus of host NIK/NF-kappaB cascade","type":"exact"},{"name":"modulation by virus of host NIK/NF-kappaB signaling","type":"exact"},{"name":"perturbation by virus of host NIK/NF-kappaB cascade","type":"exact"}],"termid":"GO:0061765"}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: GO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein hexamer, a macromolecular structure consisting of six noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein hexamerization","synonyms":[{"name":"protein hexamer assembly","type":"exact"},{"name":"protein hexamer biosynthesis","type":"exact"},{"name":"protein hexamer biosynthetic process","type":"exact"},{"name":"protein hexamer formation","type":"exact"}],"termid":"GO:0034214"}


id: PBO:0067159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 211, pseudogene","termid":"PBO:0067159"}


id: GO:0036084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of GDP-fucose into the endoplasmic reticulum lumen. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:sart","PMID:3458237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-fucose transmembrane transport","termid":"GO:0015783"},{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"GDP-fucose import into endoplasmic reticulum lumen","synonyms":[{"name":"GDP-fucose import into endoplasmic reticulum","type":"exact"},{"name":"GDP-fucose transport across endoplasmic reticulum membrane","type":"exact"},{"name":"GDP-fucose transport into endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0036084"}


id: PBO:0072630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and SPRY domain containing 1","termid":"PBO:0072630"}


id: GO:0016499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with orexin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"orexin receptor activity","termid":"GO:0016499"}


id: FYPO:0001235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth in a cell population occurs to a lower extent than normal, i.e. the population stops growing earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"decreased extent of cell population growth","synonyms":[{"name":"reduced extent of cell population growth","type":"exact"}],"termid":"FYPO:0001235"}


id: GO:0002869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of B cell deletion","termid":"GO:0002867"},{"relation_name":"is_a","term_name":"positive regulation of B cell apoptotic process","termid":"GO:0002904"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"B cell deletion","termid":"GO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell deletion","synonyms":[{"name":"activation of B cell deletion","type":"narrow"},{"name":"positive regulation of B lymphocyte deletion","type":"exact"},{"name":"positive regulation of B-cell deletion","type":"exact"},{"name":"positive regulation of B-lymphocyte deletion","type":"exact"},{"name":"stimulation of B cell deletion","type":"narrow"},{"name":"up regulation of B cell deletion","type":"exact"},{"name":"up-regulation of B cell deletion","type":"exact"},{"name":"upregulation of B cell deletion","type":"exact"}],"termid":"GO:0002869"}


id: PBO:0072318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 4","termid":"PBO:0072318"}


id: PR:000045542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and Thr-14 and Tyr-15 within the ATP binding region. UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048.","definition_xrefs":["PRO:CNA","PMID:26131711","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos:(T14,Y15,T167)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 3","type":"related"},{"name":"Cdc2-Hf","type":"exact"},{"name":"PomBase_original_PRO_term_name: cyclin-dependent kinase 1 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2/Phos:3","type":"exact"},{"name":"UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048","type":"exact"},{"name":"cdc2/Phos:(T14,Y15,T167)","type":"exact"}],"termid":"PR:000045542"}


id: GO:0042755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue.","definition_xrefs":["GOC:pr","PMID:19361967","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eating behavior","synonyms":[{"name":"eating behaviour","type":"exact"}],"termid":"GO:0042755"}


id: PBO:0058941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix import factor 23","termid":"PBO:0058941"}


id: PBO:0074598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10","termid":"PBO:0074598"}


id: PBO:0110395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL1 pseudogene 1","termid":"PBO:0110395"}


id: GO:0170011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecule that recognizes stalled ribosomes and initiates a signaling response.","definition_xrefs":["PMID:32289254","PMID:32610081","PMID:36638793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"stalled ribosome sensor activity","termid":"GO:0170011"}


id: FYPO:0007376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations entirely loses heterochromatic structure.","definition_xrefs":["PMID:29899117","PMID:31278118","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007477"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0007477"],"is_obsolete":false,"name":"abolished epigenetic heterochromatin inheritance","synonyms":[{"name":"abolished PEV","type":"related"},{"name":"abolished epigenetic heterochromatin propagation","type":"exact"},{"name":"abolished epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007376"}


id: PR:Q9HFF2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.02c gene.","definition_xrefs":["UniProtKB:Q9HFF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.02c","synonyms":[{"name":"Spom972h-SPAC683.02c","type":"exact"}],"termid":"PR:Q9HFF2"}


id: PBO:0057891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3195","termid":"PBO:0057891"}


id: PBO:0079184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 13, pseudogene","termid":"PBO:0079184"}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: GO:1903014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22365144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to differentiation-inducing factor 1","termid":"GO:1903013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"cellular response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"cellular response to DIF-1","type":"related"},{"name":"cellular response to DIF1","type":"related"}],"termid":"GO:1903014"}


id: PBO:0068067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 372","termid":"PBO:0068067"}


id: GO:0046218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete indolalkylamine catabolic process (obsolete GO:0046218)","synonyms":[{"name":"indolalkylamine breakdown","type":"exact"},{"name":"indolalkylamine catabolism","type":"exact"},{"name":"indolalkylamine degradation","type":"exact"}],"termid":"GO:0046218"}


id: PATO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased angle to","termid":"PATO:0002328"}


id: GO:0019301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose metabolic process","termid":"GO:0019299"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"rhamnose catabolic process","secondary_identifiers":["MetaCyc:RHAMCAT-PWY"],"synonyms":[{"name":"rhamnose breakdown","type":"exact"},{"name":"rhamnose catabolism","type":"exact"},{"name":"rhamnose degradation","type":"exact"}],"termid":"GO:0019301"}


id: PBO:0108693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Tbc13","termid":"PBO:0108693"}


id: FYPO:0002114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a transmembrane transporter activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652"],"is_obsolete":false,"name":"transmembrane transporter activity phenotype","synonyms":[{"name":"fission yeast transporter activity phenotype","type":"exact"}],"termid":"FYPO:0002114"}


id: PBO:0091436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091436"}


id: GO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate + H+.","definition_xrefs":["RHEA:10244","EC:3.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fumarylacetoacetase activity","secondary_identifiers":["MetaCyc:FUMARYLACETOACETASE-RXN","KEGG_REACTION:R01364","UM-BBD_reactionID:r0107","Reactome:R-HSA-71181"],"synonyms":[{"name":"4-fumarylacetoacetate fumarylhydrolase activity","type":"related"},{"name":"beta-diketonase activity","type":"related"},{"name":"fumarylacetoacetate hydrolase activity","type":"related"}],"termid":"GO:0004334"}


id: GO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.","definition_xrefs":["GOC:jl","ISBN:0140513590","GOC:das"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic respiration","secondary_identifiers":["MetaCyc:ANAEROBIC-RESPIRATION","Wikipedia:Cellular_respiration#Anaerobic_respiration","Wikipedia:Anaerobic_respiration"],"termid":"GO:0009061"}


id: PBO:0003068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription termination factor Reb1","termid":"PBO:0003068"}


id: GO:0075101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075101)","termid":"GO:0075101"}


id: PBO:0073932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 5","termid":"PBO:0073932"}


id: PBO:0014571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter (predicted)","termid":"PBO:0014571"}


id: PBO:0028190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028190"}


id: GO:0070897
data:
  {"annotated_genes":["SJAG_04274","SJAG_01475","SJAG_04654","SJAG_03900","SJAG_03285","SJAG_00766","SJAG_03007","SJAG_02458","SJAG_00692","SJAG_02174","SJAG_03095","SJAG_00741","SJAG_02813","SJAG_01707","SJAG_01771","SJAG_01808","SJAG_03120","SJAG_02691","SJAG_03956","SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85808,111226],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[63305,91818,105198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[83503,90216,111419,84462,66469,64248,84721,92106,85384,86008,104541,110837,113363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[112248,99126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on gene promoter through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC). The PIC engages the RNA polymerase on its DNA template strand and sparks polymerization of the first few RNA nucleotides.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_00741":null,"SJAG_00766":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01707":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02691":null,"SJAG_02813":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_03956":null,"SJAG_04274":null,"SJAG_04654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0006351","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"transcription preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001126"],"synonyms":[{"name":"DNA-dependent transcriptional preinitiation complex assembly","type":"exact"},{"name":"DNA-templated transcriptional preinitiation complex assembly","type":"exact"},{"name":"bacterial-type RNA polymerase preinitiation complex assembly","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription PIC formation","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional preinitiation complex formation","type":"narrow"},{"name":"transcription PIC biosynthesis","type":"broad"},{"name":"transcription PIC formation","type":"broad"},{"name":"transcriptional preinitiation complex formation","type":"broad"}],"termid":"GO:0070897","terms_by_termid":{"GO:0001188":null,"GO:0045899":null,"GO:0051123":null,"GO:0070898":null}}


id: PBO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SNR128","termid":"PBO:0016082"}


id: FYPO:0000067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of brefeldin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to brefeldin A","synonyms":[{"name":"resistance to BFA","type":"exact"},{"name":"resistance to brefeldin A during mitotic cell cycle","type":"related"},{"name":"resistance to brefeldin A during vegetative growth","type":"exact"},{"name":"resistant to Brefeldin A","type":"exact"}],"termid":"FYPO:0000067"}


id: GO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + H2O + O2 = 6-amino-2-oxohexanoate + H2O2 + NH4.","definition_xrefs":["RHEA:14437","EC:1.4.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-lysine oxidase activity","secondary_identifiers":["MetaCyc:L-LYSINE-OXIDASE-RXN","KEGG_REACTION:R00447","MetaCyc:PWY-5311"],"synonyms":[{"name":"L-lysine alpha-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (deaminating)","type":"related"},{"name":"L-lysyl-alpha-oxidase activity","type":"related"}],"termid":"GO:0050029"}


id: PBO:0052080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 5","termid":"PBO:0052080"}


id: GO:1900076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"}


id: PBO:0049649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 3","termid":"PBO:0049649"}


id: GO:1901493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decalin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decalin","termid":"GO:1901493"}


id: GO:0120229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a motile cilium.","definition_xrefs":["GOC:krc","PMID:27486780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to motile cilium","synonyms":[{"name":"protein localization to nonmotile primary cilium","type":"related"}],"termid":"GO:0120229"}


id: PBO:0028620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_binding","termid":"PBO:0028620"}


id: PBO:0041736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CaM kinase like vesicle associated","termid":"PBO:0041736"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: GO:0097432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hippocampal pyramidal neuron, a pyramidal cell of the hippocampus.","definition_xrefs":["GOC:jc","PMID:19342486","CL:1001571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyramidal neuron differentiation","termid":"GO:0021859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampal pyramidal neuron differentiation","termid":"GO:0097432"}


id: GO:0032136
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94245],"is_not":false,"summary":null,"term":"GO:0032136"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/C mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"adenine/cytosine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"A/C mispair binding","type":"exact"},{"name":"C/A mispair binding","type":"exact"},{"name":"cytosine/adenine mispair binding","type":"related"}],"termid":"GO:0032136","terms_by_termid":{"GO:0032136":null}}


id: PBO:0076132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 3","termid":"PBO:0076132"}


id: PBO:0034080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_sequentially_aligned_with","termid":"PBO:0034080"}


id: GO:0090536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and a Tip5 homolog. In mammals, NoRC is involved in regulation of transcription from RNAP I and RNA polymerase III promoters.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"NoRC complex","termid":"GO:0090536"}


id: GO:0045010
data:
  {"annotated_genes":["SJAG_02075","SJAG_01964","SJAG_03086","SJAG_04479","SJAG_02245","SJAG_04100","SJAG_01384","SJAG_01732","SJAG_02228","SJAG_03455","SJAG_04624","SJAG_01268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85472],"is_not":false,"summary":null,"term":"GO:0045010"},{"annotations":[95737,99371,84272,95912,103202,86769,101196,94897,98792,93990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[86964],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament nucleation","type":"exact"}],"termid":"GO:0045010","terms_by_termid":{"GO:0034314":null,"GO:0034316":null,"GO:0045010":null}}


id: GO:0097271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location within a cellular bud neck.","definition_xrefs":["PMID:22344253","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to bud neck","synonyms":[{"name":"protein localisation to bud neck","type":"exact"},{"name":"protein localization to cellular bud neck","type":"exact"}],"termid":"GO:0097271"}


id: GO:0045203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:go_curators","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of cell outer membrane (obsolete GO:0045203)","synonyms":[{"name":"integral to cell outer membrane","type":"narrow"},{"name":"integral to external membrane","type":"related"},{"name":"integral to outer membrane","type":"related"}],"termid":"GO:0045203"}


id: GO:1905126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20694152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of axo-dendritic protein transport","synonyms":[{"name":"regulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905126"}


id: PBO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transmembrane transporter Mmt1 (predicted)","termid":"PBO:0018137"}


id: GO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dph","GOC:elh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"negatively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"negative regulation of strand invasion","synonyms":[{"name":"negative regulation of D-loop biosynthesis","type":"related"},{"name":"negative regulation of D-loop formation","type":"related"},{"name":"negative regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0060543"}


id: FYPO:0006221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:26132084","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to cell division site, with protein mislocalised to cytoplasm","type":"exact"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to cell division site, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to cell division site, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006221"}


id: PBO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 15","termid":"PBO:0072297"}


id: PBO:0029424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation","termid":"PBO:0029424"}


id: PBO:0064597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 3","termid":"PBO:0064597"}


id: GO:1902386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycyrrhetinate.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid biosynthetic process","termid":"GO:0019745"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"glycyrrhetinate metabolic process","termid":"GO:1902384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycyrrhetinate biosynthetic process","synonyms":[{"name":"glycyrrhetinate anabolism","type":"exact"},{"name":"glycyrrhetinate biosynthesis","type":"exact"},{"name":"glycyrrhetinate formation","type":"exact"},{"name":"glycyrrhetinate synthesis","type":"exact"}],"termid":"GO:1902386"}


id: PBO:0083132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity kinase; autophosphorylation required for function; required for spindle pole body (SPB) duplication and spindle checkpoint function; contributes to bi-orientation by promoting formation of force-generating kinetochore-microtubule attachments in meiosis I; substrates include SPB proteins Spc42p, Spc110p, and Spc98p, mitotic exit network protein Mob1p, kinetochore protein Cnn1p, and checkpoint protein Mad1p; substrate of APCC(Cdh1); similar to human Mps1p","termid":"PBO:0083132"}


id: GO:1904797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of core promoter binding.","definition_xrefs":["GOC:nc","GO_REF:0000059","PMID:22723415","GOC:TermGenie","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of core promoter binding","synonyms":[{"name":"down regulation of core promoter binding","type":"exact"},{"name":"down-regulation of core promoter binding","type":"exact"},{"name":"downregulation of core promoter binding","type":"exact"},{"name":"inhibition of core promoter binding","type":"narrow"}],"termid":"GO:1904797"}


id: FYPO:0004646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of anaphase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of mitotic anaphase","synonyms":[{"name":"normal duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"normal duration of anaphase of mitosis","type":"related"},{"name":"normal duration of mitotic anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004646"}


id: PBO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 4 (pseudogene)","termid":"PBO:0048707"}


id: PBO:0087963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter; member of the ARN family of transporters that specifically recognize siderophore-iron chelates; responsible for uptake of iron bound to the siderophore triacetylfusarinine C","termid":"PBO:0087963"}


id: PBO:0083646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT1 has a paralog, EFT2, that arose from the whole genome duplication","termid":"PBO:0083646"}


id: PBO:0039894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor gamma","termid":"PBO:0039894"}


id: GO:2001254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K36 trimethylation.","definition_xrefs":["PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K36 trimethylation (obsolete GO:2001254)","termid":"GO:2001254"}


id: PBO:0076744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia translocation altered","termid":"PBO:0076744"}


id: PBO:0072277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 6","termid":"PBO:0072277"}


id: GO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an snRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"snRNA modification guide activity","termid":"GO:0030566"}


id: PBO:0075044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-7","termid":"PBO:0075044"}


id: GO:0006697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone metabolic process","termid":"GO:0008205"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ecdysone biosynthetic process","synonyms":[{"name":"ecdysone anabolism","type":"exact"},{"name":"ecdysone biosynthesis","type":"exact"},{"name":"ecdysone formation","type":"exact"},{"name":"ecdysone synthesis","type":"exact"}],"termid":"GO:0006697"}


id: GO:0046998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6R)-2-acetyl-6-(3-acetyl-2,4,6-trihydroxy-5-methylphenyl)-3-hydroxy-6-methylcyclohexa-2,4-dien-1-one + NAD+ = (S)-usnate + 2 H+ + NADH.","definition_xrefs":["RHEA:21876","EC:1.1.1.199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-usnate reductase activity","secondary_identifiers":["MetaCyc:1.1.1.199-RXN","KEGG_REACTION:R07345"],"synonyms":[{"name":"L-usnic acid dehydrogenase activity","type":"related"},{"name":"reduced-(S)-usnate:NAD+ oxidoreductase (ether-bond-forming)","type":"related"}],"termid":"GO:0046998"}


id: PBO:0017780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine transmembrane transporter (predicted)","termid":"PBO:0017780"}


id: PBO:0028418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_nitrosative_stress","termid":"PBO:0028418"}


id: PBO:0062843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1","termid":"PBO:0062843"}


id: PBO:0085959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression affects endocytic protein trafficking; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0085959"}


id: PBO:0059371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 4","termid":"PBO:0059371"}


id: PBO:0072160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 37","termid":"PBO:0072160"}


id: PBO:0058919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRlet-7a-1/let-7f-1/let-7d cluster host gene","termid":"PBO:0058919"}


id: PBO:0057308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-1","termid":"PBO:0057308"}


id: GO:0070661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a leukocyte population by cell division.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte proliferation","termid":"GO:0070661"}


id: FYPO:0008215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of GTPase inhibitor O1 than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to Rho GTPase inhibitor O1","termid":"FYPO:0008215"}


id: FYPO:0004866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the post-anaphase array is larger, and contains more microtubules, than normal.","definition_xrefs":["PMID:18418055","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal post-anaphase array morphology","termid":"FYPO:0004317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"enlarged post-anaphase array with increased number of microtubules","synonyms":[{"name":"enlarged PAA with increased number of microtubules","type":"exact"},{"name":"enlarged post-anaphase array with increased number of microtubules during mitotic cell cycle","type":"related"},{"name":"enlarged post-anaphase array with increased number of microtubules during vegetative growth","type":"exact"},{"name":"microtubules present in increased numbers in enlarged post-anaphase array","type":"exact"}],"termid":"FYPO:0004866"}


id: GO:0030799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic nucleotide metabolic process (obsolete GO:0030799)","synonyms":[{"name":"regulation of cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0030799"}


id: PATO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased length","termid":"PATO:0000574"},{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased diameter","termid":"PATO:0001715"}


id: PBO:0036510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxidoreductase-like protein, humsn OXLD1 ortholog","termid":"PBO:0036510"}


id: PBO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GAR1","termid":"PBO:0017040"}


id: FYPO:0000167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination at replication fork barriers is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased DNA recombination at mitotic DNA replication fork barriers","synonyms":[{"name":"DNA recombination defect, at mitotic DNA replication fork barriers, elevated","type":"exact"},{"name":"increased DNA recombination at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"increased DNA recombination at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"increased recombination at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0000167"}


id: GO:2000634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA processing","termid":"GO:1903798"},{"relation_name":"regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of primary miRNA processing","synonyms":[{"name":"regulation of pri-miRNA processing","type":"exact"},{"name":"regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000634"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0140097","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: PBO:0080103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP14C small subunit processome component","termid":"PBO:0080103"}


id: PBO:0109127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, EGF-CFC family member","termid":"PBO:0109127"}


id: PBO:0086071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to COPI-coated vesicles (early Golgi); mtc1 is synthetically lethal with cdc13-1","termid":"PBO:0086071"}


id: PBO:0034606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0034606"}


id: GO:0048331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the axial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"axial mesoderm morphogenesis","termid":"GO:0048319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm structural organization","synonyms":[{"name":"axial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048331"}


id: GO:2000816
data:
  {"annotated_genes":["SJAG_02169","SJAG_04259","SJAG_02451","SJAG_01297","SJAG_00883","SJAG_01679","SJAG_01837","SJAG_02336","SJAG_01330","SJAG_00460","SJAG_04699","SJAG_03126","SJAG_04126","SJAG_01082","SJAG_04999","SJAG_04884","SJAG_03353","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99337],"is_not":false,"summary":null,"term":"GO:2000816"},{"annotations":[108000,86815,103274,109829,111940,99950,95641,104297,110309],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110538,112712,86817,95489,97850,111589,105954,109833,102353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[102354,111590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90271],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112716],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90272],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic sister chromatid separation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid segregation","termid":"GO:0033048"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"negatively_regulates","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"negative regulation of mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of chromosome separation during mitosis","type":"related"},{"name":"negative regulation of mitotic chromosome separation","type":"related"},{"name":"negative regulation of mitotic sister chromatid resolution","type":"exact"},{"name":"negative regulation of sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:2000816","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: GO:0018523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quinoline + acceptor + H2O = isoquinolin-1(2H)-one + reduced acceptor.","definition_xrefs":["EC:1.3.99.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"quinoline 2-oxidoreductase activity","secondary_identifiers":["RHEA:17749","MetaCyc:1.3.99.17-RXN","UM-BBD_reactionID:r0045"],"synonyms":[{"name":"quinoline:acceptor 2-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0018523"}


id: GO:2000548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendritic cell dendrite assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of dendritic cell dendrite assembly","termid":"GO:2000547"},{"relation_name":"negatively_regulates","term_name":"dendritic cell dendrite assembly","termid":"GO:0097026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of dendritic cell dendrite assembly","synonyms":[{"name":"negative regulation of dendritic extension","type":"related"}],"termid":"GO:2000548"}


id: FYPO:0002169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to gamma radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to ionizing radiation","termid":"FYPO:0004229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth during cellular response to gamma radiation","synonyms":[{"name":"normal cell population growth during cellular response to gamma irradiation","type":"exact"},{"name":"normal cell population growth during cellular response to gamma radiation","type":"exact"},{"name":"normal cell population growth in response to gamma irradiation","type":"related"},{"name":"normal cellular response to gamma radiation","type":"related"},{"name":"normal sensitivity to gamma radiation","type":"related"},{"name":"normal vegetative cell population growth during cellular response to gamma radiation","type":"exact"}],"termid":"FYPO:0002169"}


id: PBO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small acidic protein (SMAP) domain containing protein","termid":"PBO:0017018"}


id: GO:0034538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylsalicylaldehyde + NAD+ = 3-methylsalicylate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-methylsalicylaldehyde dehydrogenase activity","termid":"GO:0034538"}


id: SO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The stem of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_stem","synonyms":[{"name":"miRNA stem","type":"exact"}],"termid":"SO:0001245"}


id: MOD:01447
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-(dihydroxymethyl)-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:12595263","PubMed:9159480","RESID:AA0493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(dihydroxymethyl)-L-methionine (Met)","synonyms":[{"name":"(2S)-2-[(dihydroxymethyl)amino]-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-(dihydroxymethyl)-L-methionine","type":"exact"},{"name":"N-formyl-L-methionine hydrate","type":"exact"},{"name":"N-orthoformylmethionine","type":"exact"}],"termid":"MOD:01447"}


id: GO:0071698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory placode over time from its initial formation until its mature state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode development","termid":"GO:0071696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode development","termid":"GO:0071698"}


id: FYPO:0001243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to thiamine is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to thiamine","synonyms":[{"name":"increased RNA accumulation during cellular response to thiamine","type":"related"},{"name":"increased RNA level during cellular response to thiamine during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to thiamine during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to vitamin B1","type":"exact"},{"name":"increased mRNA level during cellular response to thiamine","type":"narrow"},{"name":"increased transcript level during cellular response to thiamine","type":"exact"}],"termid":"FYPO:0001243"}


id: GO:0008454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:16057","MetaCyc:2.4.1.145-RXN","Reactome:R-HSA-9696980","Reactome:R-HSA-975903"],"synonyms":[{"name":"GnTIV activity","type":"related"},{"name":"N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-[2-(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl]-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"beta-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-4-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta4-acetylglucosaminyltransferase IV","type":"related"}],"termid":"GO:0008454"}


id: PBO:0065126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKD3 divergent transcript","termid":"PBO:0065126"}


id: PBO:0003751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein (predicted)","termid":"PBO:0003751"}


id: PR:O43007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade9 gene.","definition_xrefs":["UniProtKB:O43007","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.08","synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade9","type":"exact"}],"termid":"PR:O43007"}


id: PBO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in rRNA processing from interactions, human TTC27 ortholog","termid":"PBO:0110066"}


id: PBO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 125 pseudogene","termid":"PBO:0070200"}


id: PBO:0028987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_than_four_spores","termid":"PBO:0028987"}


id: PBO:0039030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 6","termid":"PBO:0039030"}


id: GO:0047723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + IMP = D-ribose 5-phosphate + hypoxanthine.","definition_xrefs":["RHEA:20469","EC:3.2.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"inosinate nucleosidase activity","secondary_identifiers":["KEGG_REACTION:R01128","MetaCyc:INOSINATE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"5'-inosinate phosphoribohydrolase activity","type":"related"}],"termid":"GO:0047723"}


id: PBO:0054144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1511","termid":"PBO:0054144"}


id: PBO:0085536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6B has a paralog, RPS6A, that arose from the whole genome duplication","termid":"PBO:0085536"}


id: PBO:0083857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1F0 ATPase synthase peripheral stalk assembly factor; subunit of the matrix-exposed inner mitochondrial membrane localized INA complex (Ina22p-Ina17p) involved in assembly of the F1F0 peripheral stalk; co-purifies with Ina22p and ATP synthase subunits; null mutant displays elevated frequency of mitochondrial genome loss and has a respiratory growth defect","termid":"PBO:0083857"}


id: GO:1990186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of lymphatic vessels.","definition_xrefs":["PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"is_a","term_name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphatic vessel size","synonyms":[{"name":"regulation of collecting lymphatic vessel size","type":"narrow"}],"termid":"GO:1990186"}


id: GO:1904561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diphenidol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:25796330","GO_REF:0000071","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to diphenidol","termid":"GO:1904560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diphenidol","termid":"GO:1904561"}


id: GO:1990797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled release of cholecystokinin from a cell. Cholecystokinin is a peptide hormone that participates in pancreatic enzyme release in the gut and is also found in the brain.","definition_xrefs":["PMID:2755938"],"gene_count":0,"genotype_count":0,"name":"obsolete cholecystokinin secretion (obsolete GO:1990797)","synonyms":[{"name":"CCK secretion","type":"exact"}],"termid":"GO:1990797"}


id: PBO:0015245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag102","termid":"PBO:0015245"}


id: GO:0010248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ions to establish or maintain an electrochemical gradient across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"establishment or maintenance of transmembrane electrochemical gradient","termid":"GO:0010248"}


id: PBO:0072463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 27","termid":"PBO:0072463"}


id: PATO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001146 resistance value (obsolete PATO:0001146)","termid":"PATO:0001146"}


id: GO:1902194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902194"}


id: GO:0045271
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Respiratory chain complex I is an enzyme of the respiratory chain. It consists of several polypeptide chains and is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix. The electrons of NADH enter the chain at this complex.","definition_xrefs":["ISBN:0716749556","GOC:imk","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex","termid":"GO:0030964"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"respiratory chain complex I","secondary_identifiers":["GO:0045279"],"synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"exact"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"exact"},{"name":"NADH-Q oxidoreductase complex","type":"exact"},{"name":"electron transport complex I","type":"related"}],"termid":"GO:0045271"}


id: GO:0008399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of naphthalene to naphthalene 1,2-oxide.","definition_xrefs":["PMID:1981702","PMID:1742282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"naphthalene hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2F2","type":"narrow"}],"termid":"GO:0008399"}


id: GO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in kidney development","termid":"GO:0072111"}


id: PR:Q9P7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activation protein git1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.20c","synonyms":[{"name":"Spom972h-git1","type":"exact"},{"name":"glucose-insensitive transcription protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K5"}


id: GO:0006393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary mitochondrial transcript.","definition_xrefs":["PMID:29945721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"mitochondrial transcription","termid":"GO:0006390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"termination of mitochondrial transcription","synonyms":[{"name":"RNA transcription termination from mitochondrial promoter","type":"exact"},{"name":"mitochondrial transcription termination","type":"exact"}],"termid":"GO:0006393"}


id: GO:0043105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTP cyclohydrolase I activity","termid":"GO:0043095"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of GTP cyclohydrolase I activity","synonyms":[{"name":"down regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"down-regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"downregulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"inhibition of GTP cyclohydrolase I activity","type":"narrow"}],"termid":"GO:0043105"}


id: FYPO:0004573
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115479,115481],"is_not":false,"summary":null,"term":"FYPO:0004573"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-coding RNA transcribed from telomeric regions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","SO:0001927","PMID:25398909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":2,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased telomeric transcript level","references_by_uniquename":{"PMID:35226668":null},"synonyms":[{"name":"increased telomeric lncRNA level","type":"exact"},{"name":"increased telomeric transcript accumulation","type":"related"},{"name":"increased telomeric transcript level during mitotic cell cycle","type":"related"},{"name":"increased telomeric transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0004573","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null}}


id: GO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in cell wall organization or biogenesis (obsolete GO:0000197)","synonyms":[{"name":"activation of MAP kinase kinase kinase activity during cell wall biogenesis","type":"exact"},{"name":"activation of MAPKKK activity involved in cell wall biogenesis","type":"related"},{"name":"activation of MAPKKK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAP kinase kinase kinase activity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPKKK activity","type":"exact"}],"termid":"GO:0000197"}


id: PBO:0052856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-16","termid":"PBO:0052856"}


id: PATO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000369 unidirectional (obsolete PATO:0000369)","termid":"PATO:0000369"}


id: GO:1990137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R1H + R2OOH = R1OH + R2OH.","definition_xrefs":["PMID:19467604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"plant seed peroxidase activity","secondary_identifiers":["MetaCyc:RXN-11819","EC:1.11.2.3"],"synonyms":[{"name":"peroxygenase activity","type":"related"}],"termid":"GO:1990137"}


id: PBO:0049186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL2 divergent transcript","termid":"PBO:0049186"}


id: GO:0046464
data:
  {"annotated_genes":["SJAG_02089","SJAG_03604","SJAG_02543","SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77254],"is_not":false,"summary":null,"term":"GO:0046464"},{"annotations":[87966,90106,113597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"},{"relation_name":"is_a","term_name":"neutral lipid catabolic process","termid":"GO:0046461"},{"relation_name":"is_a","term_name":"glycerolipid catabolic process","termid":"GO:0046503"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"acylglycerol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acylglycerol breakdown","type":"exact"},{"name":"acylglycerol catabolism","type":"exact"},{"name":"acylglycerol degradation","type":"exact"}],"termid":"GO:0046464","terms_by_termid":{"GO:0019433":null,"GO:0046464":null}}


id: PBO:0076976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 7","termid":"PBO:0076976"}


id: GO:0004161
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95650,95651,105531],"is_not":false,"summary":null,"term":"GO:0004161"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate.","definition_xrefs":["EC:2.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"dimethylallyltranstransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191322","MetaCyc:GPPSYN-RXN","Reactome:R-HSA-9717834","RHEA:22408"],"synonyms":[{"name":"trans-farnesyl pyrophosphate synthetase activity","type":"related"},{"name":"(2E,6E)-farnesyl diphosphate synthetase activity","type":"related"},{"name":"DMAPP:IPP-dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase activity","type":"related"},{"name":"dimethylallyltransferase activity","type":"exact"},{"name":"diprenyltransferase activity","type":"related"},{"name":"geranyl diphosphate synthase","type":"exact"},{"name":"geranyl pyrophosphate synthase activity","type":"related"},{"name":"geranyl pyrophosphate synthetase activity","type":"related"},{"name":"geranyl-diphosphate synthase activity","type":"related"}],"termid":"GO:0004161","terms_by_termid":{"GO:0004161":null}}


id: GO:0140699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic GMP-AMP.","definition_xrefs":["PMID:23258413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"cyclic GMP-AMP synthase activity","synonyms":[{"name":"cyclic-GMP-AMP synthase activity","type":"exact"}],"termid":"GO:0140699"}


id: GO:0045559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of TRAIL-R2 (TNF-related apoptosis inducing ligand receptor 2), which engages a caspase-dependent apoptotic pathway and mediates apoptosis via the intracellular adaptor molecule FADD/MORT1.","definition_xrefs":["GOC:go_curators","PMID:9311998"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor 2 biosynthetic process (obsolete GO:0045559)","synonyms":[{"name":"TRAIL receptor 2 anabolism","type":"exact"},{"name":"TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"TRAIL receptor 2 formation","type":"exact"},{"name":"TRAIL receptor 2 synthesis","type":"exact"},{"name":"tumor necrosis factor receptor superfamily member 10B biosynthetic process","type":"exact"}],"termid":"GO:0045559"}


id: PBO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calicin","termid":"PBO:0042133"}


id: GO:0048207
data:
  {"annotated_genes":["SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91591],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"}]},"cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the rough endoplasmic reticulum to the cis-Golgi.","definition_xrefs":["PMID:10219233","GOC:jid","GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle targeting, rough ER to cis-Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rough ER to cis-Golgi targeting","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi targeting","type":"exact"},{"name":"vesicle targeting, rough endoplasmic reticulum to cis-Golgi","type":"exact"}],"termid":"GO:0048207","terms_by_termid":{"GO:0048208":null}}


id: PBO:0079631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 1","termid":"PBO:0079631"}


id: GO:0032761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphotoxin A production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphotoxin A production","termid":"GO:0032681"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"positive regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903557"},{"relation_name":"positively_regulates","term_name":"lymphotoxin A production","termid":"GO:0032641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of lymphotoxin A production","secondary_identifiers":["GO:0043017"],"synonyms":[{"name":"activation of lymphotoxin A production","type":"narrow"},{"name":"positive regulation of LTA production","type":"exact"},{"name":"positive regulation of TNF-beta production","type":"exact"},{"name":"positive regulation of lymphotoxin A biosynthetic process","type":"narrow"},{"name":"positive regulation of lymphotoxin-alpha production","type":"exact"},{"name":"positive regulation of tumor necrosis factor-beta production","type":"exact"},{"name":"stimulation of lymphotoxin A production","type":"narrow"},{"name":"up regulation of lymphotoxin A production","type":"exact"},{"name":"up-regulation of lymphotoxin A production","type":"exact"},{"name":"upregulation of lymphotoxin A production","type":"exact"}],"termid":"GO:0032761"}


id: FYPO:0001332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to stress is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of translation in response to stress","termid":"FYPO:0000263"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of translation in response to stress during vegetative growth","synonyms":[{"name":"abnormal regulation of translation in response to stress during mitotic cell cycle","type":"related"},{"name":"protein synthesis after stress, defective during vegetative growth","type":"related"}],"termid":"FYPO:0001332"}


id: PBO:0041786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPSL divergent transcript","termid":"PBO:0041786"}


id: PBO:0027214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0027214"}


id: PBO:0067983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 285","termid":"PBO:0067983"}


id: PATO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer being divided into multiple parts.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipartite","termid":"PATO:0002510"}


id: GO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"},{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}


id: PBO:0073867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 3","termid":"PBO:0073867"}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: GO:0035595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside + H2O = 1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside + acetate. This reaction is the hydrolysis of an acetyl group from N-acetylglucosaminylinositol.","definition_xrefs":["GOC:rs","EC:3.5.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0019213","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-acetylglucosaminylinositol deacetylase activity","secondary_identifiers":["KEGG_REACTION:R09651","RHEA:26180","MetaCyc:RXN1G-2"],"synonyms":[{"name":"1-(2-acetamido-2-deoxy-alpha-D-glucopyranosyl)-1D-myo-inositol acetylhydrolase activity","type":"related"},{"name":"1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase activity","type":"related"},{"name":"GlcNAc-Ins deacetylase activity","type":"exact"},{"name":"N-acetyl-1D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase activity","type":"related"}],"termid":"GO:0035595"}


id: PBO:0086087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein packaged into COPII vesicles for ER to Golgi trafficking; forms a complex with Emp47p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0086087"}


id: GO:2000843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of testosterone secretion","termid":"GO:2000843"}


id: PBO:0049323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2A1 antisense RNA 1","termid":"PBO:0049323"}


id: PBO:0080663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 9","termid":"PBO:0080663"}


id: GO:1905079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cerebellar neuron development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26609159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"cerebellar neuron development","termid":"GO:0098749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebellar neuron development","termid":"GO:1905079"}


id: PBO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine triphosphatase","termid":"PBO:0051943"}


id: PBO:0029793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_cytoplasmic_protein_localization","termid":"PBO:0029793"}


id: GO:0046166
data:
  {"annotated_genes":["SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112393],"is_not":false,"summary":null,"term":"GO:0046166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate biosynthesis","type":"exact"},{"name":"glyceraldehyde 3-phosphate biosynthetic process","type":"exact"},{"name":"glyceraldehyde-3-phosphate anabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate biosynthesis","type":"exact"},{"name":"glyceraldehyde-3-phosphate formation","type":"exact"},{"name":"glyceraldehyde-3-phosphate synthesis","type":"exact"}],"termid":"GO:0046166","terms_by_termid":{"GO:0046166":null}}


id: PBO:0086006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SPS22 has a paralog, SPS2, that arose from the whole genome duplication; redundant with Sps2p for the organization of the beta-glucan layer of the spore wall","termid":"PBO:0086006"}


id: PBO:0068376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 169","termid":"PBO:0068376"}


id: PBO:0048639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 9","termid":"PBO:0048639"}


id: PATO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a trumpet.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trumpet-shaped","termid":"PATO:0002375"}


id: PBO:0003875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLTH domain","termid":"PBO:0003875"}


id: GO:2000419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil extravasation","termid":"GO:0072682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil extravasation","termid":"GO:2000419"}


id: GO:0009077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of amino acids of the histidine family.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine family amino acid catabolic process (obsolete GO:0009077)","synonyms":[{"name":"histidine family amino acid breakdown","type":"exact"},{"name":"histidine family amino acid catabolic process","type":"exact"},{"name":"histidine family amino acid catabolism","type":"exact"},{"name":"histidine family amino acid degradation","type":"exact"}],"termid":"GO:0009077"}


id: PBO:0042306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule","termid":"PBO:0042306"}


id: GO:1903622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase III activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25392932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase III","termid":"GO:0006359"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of RNA polymerase III activity","synonyms":[{"name":"regulation of DNA-directed RNA polymerase activity involved in transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:1903622"}


id: PBO:0078363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 8-1","termid":"PBO:0078363"}


id: PBO:0001384
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response pathway signalling (SRP), mediated phosphorylation of Ser402 regulates the timing of commitment to mitosis","termid":"PBO:0001384"}


id: MOD:01063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monomethylated phenylalanine.","definition_xrefs":["DeltaMass:198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated phenylalanine","termid":"MOD:00717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated phenylalanine","synonyms":[{"name":"NMePhe","type":"exact"}],"termid":"MOD:01063"}


id: PBO:0065782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 2","termid":"PBO:0065782"}


id: GO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","PMID:11911826","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"regulation of immune cell mediated cell death","type":"exact"},{"name":"regulation of immune cell mediated cell killing","type":"exact"},{"name":"regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001910"}


id: PBO:0064398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNKD pseudogene 1","termid":"PBO:0064398"}


id: PBO:0068536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 139, pseudogene","termid":"PBO:0068536"}


id: FYPO:0004954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more prospore membrane than normal. Excess prospore membrane may take the form of bubble-like structures continuous with the rest of the membrane.","definition_xrefs":["PMID:17951524","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane","termid":"FYPO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"excess prospore membrane present","synonyms":[{"name":"excess forespore membrane present","type":"exact"},{"name":"forespore membrane bubble formation","type":"related"},{"name":"prospore membrane present in greater amount","type":"exact"}],"termid":"FYPO:0004954"}


id: GO:0102087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + L-glutamate + ATP = H+ + N-benzoyl-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-benzoyl-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10886"],"termid":"GO:0102087"}


id: GO:0036289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own serine amino acid residues, or a serine residue on an identical protein.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine autophosphorylation","synonyms":[{"name":"serine autophosphorylation","type":"exact"}],"termid":"GO:0036289"}


id: PBO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.48","termid":"PBO:0000734"}


id: GO:1905849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of forward locomotion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11717360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of forward locomotion","termid":"GO:0043059"},{"relation_name":"negatively_regulates","term_name":"forward locomotion","termid":"GO:0043056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of forward locomotion","synonyms":[{"name":"down regulation of forward locomotion","type":"exact"},{"name":"down-regulation of forward locomotion","type":"exact"},{"name":"downregulation of forward locomotion","type":"exact"},{"name":"inhibition of forward locomotion","type":"narrow"}],"termid":"GO:1905849"}


id: PBO:0049298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 2","termid":"PBO:0049298"}


id: PBO:0029271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029271"}


id: PBO:0111772
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain","termid":"PBO:0111772"}


id: GO:0004151
data:
  {"annotated_genes":["SJAG_00444","SJAG_00412","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85555,89491,102562],"is_not":false,"summary":null,"term":"GO:0004151"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["RHEA:24296","EC:3.5.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00444":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydroorotase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01993","MetaCyc:DIHYDROOROT-RXN","Reactome:R-HSA-73571"],"synonyms":[{"name":"(S)-dihydroorotate amidohydrolase activity","type":"related"},{"name":"DHOase activity","type":"related"},{"name":"carbamoylaspartic dehydrase activity","type":"related"},{"name":"dihydroorotate hydrolase activity","type":"related"}],"termid":"GO:0004151","terms_by_termid":{"GO:0004151":null}}


id: PATO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001219 area_unit (obsolete PATO:0001219)","termid":"PATO:0001219"}


id: PBO:0067295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 380, pseudogene","termid":"PBO:0067295"}


id: PBO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1 pseudogene 1","termid":"PBO:0043308"}


id: GO:1901760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-L-Ara4N-lipid A which occurs as a result of modification of the lipid A moiety of lipopolysaccharide by the addition of the sugar 4-amino-4-deoxy-L-arabinose (L-Ara4N). This strategy is adopted by pathogenic Gram-negative bacteria to evade cationic antimicrobial peptides produced by the innate immune system.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:17928292","PMID:19166326","UniPathway:UPA00037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"lipooligosaccharide biosynthetic process","termid":"GO:1901271"},{"relation_name":"is_a","term_name":"beta-L-Ara4N-lipid A metabolic process","termid":"GO:1901759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-L-Ara4N-lipid A biosynthetic process","synonyms":[{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A biosynthesis","type":"exact"},{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A biosynthetic process","type":"exact"},{"name":"beta-L-Ara4N-lipid A anabolism","type":"exact"},{"name":"beta-L-Ara4N-lipid A biosynthesis","type":"exact"},{"name":"beta-L-Ara4N-lipid A formation","type":"exact"},{"name":"beta-L-Ara4N-lipid A synthesis","type":"exact"}],"termid":"GO:1901760"}


id: GO:0000249
data:
  {"annotated_genes":["SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87565],"is_not":false,"summary":null,"term":"GO:0000249"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of the C-22(23) double bond in the sterol side chain. An example reaction: 5,7,24(28)-ergostatrienol + O2 + NADPH = 5,7,22,24(28)-ergostatetraenol + 2 H2O + NADP+.","definition_xrefs":["MetaCyc:RXN3O-227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"},{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"C-22 sterol desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000249","terms_by_termid":{"GO:0000249":null}}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: PBO:0058677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6805","termid":"PBO:0058677"}


id: GO:0080070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-methylthiooctyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 8-methylthiooctyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4333"],"termid":"GO:0080070"}


id: SO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with nucleotide residues.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_binding_site","synonyms":[{"name":"np_bind","type":"exact"},{"name":"nucleotide binding site","type":"exact"}],"termid":"SO:0001655"}


id: PBO:0087405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate receptor of the glucose-induced degradation-deficient (GID) complex that targets gluconeogenic enzymes for proteasomal degradation upon switch from ethanol to glucose as a carbon source; overexpression causes a cell cycle delay or arrest; null mutation results in a decrease in plasma membrane electron transport; protein abundance increases in response to DNA replication stress","termid":"PBO:0087405"}


id: PBO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA acetyltransferase (predicted)","termid":"PBO:0004432"}


id: GO:0043464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic enzymatic conversion of L-malate to L-lactate and carbon dioxide, yielding energy in the form of ATP.","definition_xrefs":["PMID:8808948","PMID:10427020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"malolactic fermentation","secondary_identifiers":["Wikipedia:Malolactic_fermentation"],"synonyms":[{"name":"L-malate fermentation","type":"broad"},{"name":"malate fermentation","type":"broad"},{"name":"malo-lactate fermentation","type":"exact"},{"name":"malolactate fermentation","type":"exact"}],"termid":"GO:0043464"}


id: PBO:0070724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 29","termid":"PBO:0070724"}


id: PBO:0040995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA3 divergent transcript","termid":"PBO:0040995"}


id: PATO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001087 relative efficiency value (obsolete PATO:0001087)","termid":"PATO:0001087"}


id: GO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-valine from one side of a membrane to the other. L-valine is 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-valine transmembrane transporter activity","synonyms":[{"name":"L-valine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0005304"}


id: PBO:0043087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic gamma subunit","termid":"PBO:0043087"}


id: PBO:0069547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 818, pseudogene","termid":"PBO:0069547"}


id: PBO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_polarity","termid":"PBO:0034568"}


id: PBO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit (predicted)","termid":"PBO:0001501"}


id: PBO:0111689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, subunit beta","termid":"PBO:0111689"}


id: GO:0090630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of GTPase activity","termid":"GO:0043547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of GTPase activity","secondary_identifiers":["GO:0032863","GO:0032858","GO:0032857","GO:0032856","GO:0032861","GO:0032864","GO:0032862","GO:0032859","GO:0032860"],"synonyms":[{"name":"ARF GTPase activation","type":"narrow"},{"name":"Cdc42 GTPase activation","type":"narrow"},{"name":"Rab GTPase activation","type":"narrow"},{"name":"Rac GTPase activation","type":"narrow"},{"name":"Ral GTPase activation","type":"narrow"},{"name":"Ran GTPase activation","type":"narrow"},{"name":"Rap GTPase activation","type":"narrow"},{"name":"Ras GTPase activation","type":"narrow"},{"name":"Rho GTPase activation","type":"narrow"},{"name":"activation of ARF GTPase activity","type":"narrow"},{"name":"activation of Cdc42 GTPase activity","type":"narrow"},{"name":"activation of Rab GTPase activity","type":"narrow"},{"name":"activation of Rac GTPase activity","type":"narrow"},{"name":"activation of Ral GTPase activity","type":"narrow"},{"name":"activation of Ran GTPase activity","type":"narrow"},{"name":"activation of Rap GTPase activity","type":"narrow"},{"name":"activation of Ras GTPase activity","type":"narrow"},{"name":"activation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0090630"}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: PBO:0033751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_intergenic_meiotic_recombination","termid":"PBO:0033751"}


id: PBO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member C, pseudogene","termid":"PBO:0048908"}


id: GO:0030041
data:
  {"annotated_genes":["SJAG_01993","SJAG_00279","SJAG_04479","SJAG_03086","SJAG_00677","SJAG_04100","SJAG_01268","SJAG_02245","SJAG_00521","SJAG_02700","SJAG_02566","SJAG_04982","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64191,88393,89895,93793,94896],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[88394,94956,110360,84378],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[86771,98794,97804,101199,85927],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[110363,93796],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin filament polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin polymerization","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0030041","terms_by_termid":{"GO:0030041":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0073458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A1","termid":"PBO:0073458"}


id: GO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During conjugation without cellular fusion, the process that results in pairing complementary mating types. Localized morphological, cytological, and cytoskeletal changes connect the mating types without cytoplasmic mixing.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion between unicellular organisms","termid":"GO:0098610"},{"relation_name":"part_of","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"conjugant formation","termid":"GO:0000761"}


id: PBO:0052627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6A","termid":"PBO:0052627"}


id: GO:0015386
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85423],"is_not":false,"summary":null,"term":"GO:0015386"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in).","definition_xrefs":["TC:2.A.37.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:potassium antiporter activity","termid":"GO:0022821"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"potassium:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29467","MetaCyc:TRANS-RXN-42"],"synonyms":[{"name":"potassium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015386","terms_by_termid":{"GO:0015386":null}}


id: PBO:0071684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 16","termid":"PBO:0071684"}


id: FYPO:0004335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to hydrogen peroxide. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction during cellular response to rapamycin","termid":"FYPO:0003425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein binding cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein-protein interaction during cellular response to H2O2","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004335"}


id: PR:P0CAN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nxt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CAN8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTF2-related export protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.03","synonyms":[{"name":"Spom972h-nxt1","type":"exact"},{"name":"p15 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P0CAN8"}


id: PBO:0079236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 9B","termid":"PBO:0079236"}


id: PBO:0072323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 9","termid":"PBO:0072323"}


id: GO:1990192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in the diameter of collecting lymphatic vessels.","definition_xrefs":["PMID:23322290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphatic vessel size","termid":"GO:1990186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collecting lymphatic vessel constriction","synonyms":[{"name":"lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1990192"}


id: PBO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Par2","termid":"PBO:0000915"}


id: PBO:0054211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1591","termid":"PBO:0054211"}


id: FYPO:0004467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"normal protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0004467"}


id: GO:1901594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a capsazepine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to capsazepine","termid":"GO:1901594"}


id: GO:0022866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables transfer of one electron across a membrane.","definition_xrefs":["TC:5.B","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane 1-electron transfer carrier (obsolete GO:0022866)","synonyms":[{"name":"transmembrane one-electron transfer carrier","type":"exact"}],"termid":"GO:0022866"}


id: PBO:0073071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein 2 pseudogene 1","termid":"PBO:0073071"}


id: GO:1900498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide catabolic process","termid":"GO:0033122"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butanol","termid":"GO:1900497"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0055086","GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"down regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"down regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"downregulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"downregulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"inhibition of butyryl-CoA catabolic process to butanol","type":"narrow"},{"name":"inhibition of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"negative regulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900498"}


id: SO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-translated 93 nt antisense RNA that binds its target ompF mRNA and regulates ompF expression by inhibiting translation and inducing degradation of the message.","direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicF_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/MicF_RNA"],"synonyms":[{"name":"MicF RNA","type":"exact"}],"termid":"SO:0000383"}


id: PBO:0080884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N6-threonylcarbamoyltransferase domain containing","termid":"PBO:0080884"}


id: GO:0052731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline phosphate + H2O = choline + phosphate.","definition_xrefs":["EC:3.1.3.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphocholine phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1483159","KEGG_REACTION:R06871","RHEA:10492","MetaCyc:RXN-5647"],"synonyms":[{"name":"3X11A","type":"related"},{"name":"PHOSPHO1","type":"related"},{"name":"phosphoethanolamine phosphohydrolase activity","type":"related"}],"termid":"GO:0052731"}


id: PBO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc7/UbcP3","termid":"PBO:0003811"}


id: GO:1900580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","termid":"GO:1900579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol catabolic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol breakdown","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol catabolism","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol degradation","type":"exact"}],"termid":"GO:1900580"}


id: GO:1904160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a chloroplast starch grain.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:25710501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chloroplast","termid":"GO:0072598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chloroplast starch grain","synonyms":[{"name":"protein localisation in chloroplast starch grain","type":"exact"},{"name":"protein localisation to chloroplast starch grain","type":"exact"},{"name":"protein localization in chloroplast starch grain","type":"exact"}],"termid":"GO:1904160"}


id: GO:0016649
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces quinone or similar compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.5.-"],"termid":"GO:0016649","terms_by_termid":{"GO:0004657":null}}


id: MOD:00710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton and replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"protonated-dimethylated residue","synonyms":[{"name":"Me2+Res","type":"exact"}],"termid":"MOD:00710"}


id: GO:0070573
data:
  {"annotated_genes":["SJAG_04858","SJAG_01542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92815,98315],"is_not":false,"summary":null,"term":"GO:0070573"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a dipeptide by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metalloexopeptidase activity","termid":"GO:0008235"},{"relation_name":"is_a","term_name":"dipeptidase activity","termid":"GO:0016805"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01542":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0003824","GO:0008233"],"is_obsolete":false,"name":"metallodipeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2022405","Reactome:R-HSA-2022398","Reactome:R-HSA-2065355"],"synonyms":[{"name":"metallo-exo-dipeptidase activity","type":"exact"},{"name":"metalloexodipeptidase activity","type":"exact"}],"termid":"GO:0070573","terms_by_termid":{"GO:0070573":null}}


id: PBO:0049133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein pathway suppressor 1","termid":"PBO:0049133"}


id: FYPO:0001448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered cellular trehalose level","termid":"FYPO:0001446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"trehalose absent from cell during heat shock","synonyms":[{"name":"absent trehalose","type":"exact"},{"name":"trehalose absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"trehalose absent from cell during vegetative growth and during heat shock","type":"exact"}],"termid":"FYPO:0001448"}


id: PBO:0002476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein, involved in chromatin remodeling (predicted)","termid":"PBO:0002476"}


id: PBO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast Phosphatase Activator","termid":"PBO:0007964"}


id: PBO:0068194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 501","termid":"PBO:0068194"}


id: FYPO:0002360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin silencing at centromere","synonyms":[{"name":"normal chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0002360"}


id: PR:O94290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf29 gene.","definition_xrefs":["UniProtKB:O94290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component ist3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.05c","synonyms":[{"name":"RNA-binding protein cwf29 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cwf29","type":"exact"},{"name":"complexed with cdc5 protein 29 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94290"}


id: GO:0019489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylgallate metabolic process","synonyms":[{"name":"methylgallate metabolism","type":"exact"}],"termid":"GO:0019489"}


id: PBO:0071437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 43","termid":"PBO:0071437"}


id: FYPO:0003868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains fewer mitochondria than normal during G0 phase.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitochondria present in decreased numbers during G0","synonyms":[{"name":"decreased number of mitochondria during G0","type":"exact"},{"name":"fewer mitochondria during G0","type":"exact"},{"name":"mitochondria present in decreased numbers during cell quiescence","type":"exact"},{"name":"mitochondria present in decreased numbers during quiescence","type":"exact"},{"name":"mitochondria present in reduced numbers during G0","type":"exact"}],"termid":"FYPO:0003868"}


id: PBO:0083348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene ECM38","termid":"PBO:0083348"}


id: PBO:0046901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 24 member B","termid":"PBO:0046901"}


id: GO:0032871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of karyogamy, the creation of a single nucleus from multiple nuclei as a result of membrane fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleus organization","termid":"GO:1903353"},{"relation_name":"regulates","term_name":"karyogamy","termid":"GO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of karyogamy","termid":"GO:0032871"}


id: PBO:0067654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 831, pseudogene","termid":"PBO:0067654"}


id: GO:1901103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gramicidin S.","definition_xrefs":["PMID:7534306","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gramicidin S biosynthetic process","synonyms":[{"name":"gramicidin S anabolism","type":"exact"},{"name":"gramicidin S biosynthesis","type":"exact"},{"name":"gramicidin S formation","type":"exact"},{"name":"gramicidin S synthesis","type":"exact"}],"termid":"GO:1901103"}


id: GO:1990942
data:
  {"annotated_genes":["SJAG_02451","SJAG_01297","SJAG_02336","SJAG_01613","SJAG_01224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90269,94688,95284,99953,104302],"is_not":false,"summary":null,"term":"GO:1990942"}]},"cv_name":"biological_process","definition":"A mechanism to recapture 'lost' chromosomes (chromosomes which have become detached from the spindle) during metaphase of mitotic chromosome segregation. Chromosomes with unattached kinetochores are migrated along (non polar) spindle microtubules to the mitotic spindle pole body by a combination of microtubule depolymerisation and 'kinetochore sliding' (migration of the chromosome along the microtubule). The chromosome subsequently migrates along the polar spindle microtubule to the metaphase plate.","definition_xrefs":["PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02336":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179","GO:0000070"],"is_obsolete":false,"name":"mitotic metaphase chromosome recapture","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1905185"],"synonyms":[{"name":"kinetochore retrieval","type":"exact"},{"name":"metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in kinetochore retrieval","type":"exact"},{"name":"microtubule sliding involved in metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in mitotic metaphase chromosome recapture","type":"related"},{"name":"microtubule sliding involved in sister kinetochore recapture","type":"exact"},{"name":"sister kinetochore recapture","type":"exact"}],"termid":"GO:1990942","terms_by_termid":{"GO:1990942":null}}


id: PBO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium pseudogene 1","termid":"PBO:0060844"}


id: PBO:0073896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 2","termid":"PBO:0073896"}


id: GO:0033324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate N-monomethylethanolamine.","definition_xrefs":["MetaCyc:PWY-3542","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via N-monomethylethanolamine","secondary_identifiers":["MetaCyc:PWY-4762"],"synonyms":[{"name":"choline anabolism via N-monomethylethanolamine","type":"exact"},{"name":"choline biosynthesis via N-monomethylethanolamine","type":"exact"},{"name":"choline formation via N-monomethylethanolamine","type":"exact"},{"name":"choline synthesis via N-monomethylethanolamine","type":"exact"}],"termid":"GO:0033324"}


id: PBO:0065528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 3 (gene/pseudogene)","termid":"PBO:0065528"}


id: PBO:0088582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S5","termid":"PBO:0088582"}


id: GO:0018937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitroglycerin, a well-known nitrate ester and an important component of dynamite and other propellants. Toxic to algae, invertebrate, and vertebrates.","definition_xrefs":["UM-BBD_pathwayID:ng"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroglycerin metabolic process","secondary_identifiers":["MetaCyc:P201-PWY"],"synonyms":[{"name":"NG metabolic process","type":"exact"},{"name":"NG metabolism","type":"exact"},{"name":"nitroglycerin metabolism","type":"exact"}],"termid":"GO:0018937"}


id: GO:0047784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + cortisol = CoA + cortisol 21-acetate.","definition_xrefs":["EC:2.3.1.27","RHEA:17073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cortisol O-acetyltransferase activity","secondary_identifiers":["MetaCyc:CORTISOL-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R02837"],"synonyms":[{"name":"acetyl-CoA:cortisol O-acetyltransferase activity","type":"related"},{"name":"corticosteroid acetyltransferase activity","type":"related"},{"name":"corticosteroid-21-O-acetyltransferase activity","type":"related"},{"name":"cortisol acetyltransferase activity","type":"related"}],"termid":"GO:0047784"}


id: FYPO:0007857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle midzone is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division. The meiotic spindle midzone is the area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1903096","GO:1990385","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle during meiosis I","termid":"FYPO:0007750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle midzone during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle midzone during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle midzone","type":"exact"},{"name":"normal protein localization to spindle midzone during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007857"}


id: GO:0010756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasminogen activation","termid":"GO:0010755"},{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"positively_regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"positive regulation of plasminogen activation","termid":"GO:0010756"}


id: PBO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1","termid":"PBO:0050845"}


id: GO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"zygospore formation","termid":"GO:0034296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of zygospore formation","termid":"GO:0075298"}


id: GO:1905743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium uptake that is involved in negative regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["PMID:26644474","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"negative regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium import into the mitochondrion involved in negative regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane import into mitochondrion involved in negative regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium uptake involved in negative regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905743"}


id: FYPO:0000040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize methionine, and therefore requires methionine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for sulfur-containing amino acid","termid":"FYPO:0003355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for methionine","synonyms":[{"name":"growth auxotrophic for methionine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for methionine during vegetative growth","type":"exact"},{"name":"methionine auxotrophy","type":"exact"}],"termid":"FYPO:0000040"}


id: PBO:0056217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B18","termid":"PBO:0056217"}


id: PBO:0091619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase","termid":"PBO:0091619"}


id: GO:0043221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein from the structural maintenance of chromosomes (SMC) family, a group of chromosomal ATPases with a role in mitotic chromosome organization.","definition_xrefs":["InterPro:IPR024704","GOC:jl","GOC:vw","PMID:9640531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SMC family protein binding","synonyms":[{"name":"structural maintenance of chromosomes family protein binding","type":"exact"}],"termid":"GO:0043221"}


id: GO:2000430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil aggregation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of neutrophil aggregation","termid":"GO:2000428"},{"relation_name":"positively_regulates","term_name":"neutrophil aggregation","termid":"GO:0070488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil aggregation","synonyms":[{"name":"positive regulation of neutrocyte aggregation","type":"exact"},{"name":"positive regulation of neutrophil leucocyte aggregation","type":"exact"},{"name":"positive regulation of neutrophilic leukocyte aggregation","type":"exact"}],"termid":"GO:2000430"}


id: PBO:0031819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_apoptosis","termid":"PBO:0031819"}


id: PBO:0061580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal Xaa-Pro-Lys N-methyltransferase 1","termid":"PBO:0061580"}


id: GO:1901808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of capsanthin.","definition_xrefs":["UniPathway:UPA00806","MetaCyc:PWY-5174","GOC:yaf","GOC:TermGenie","PMID:10995282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"capsanthin catabolic process","synonyms":[{"name":"capsanthin breakdown","type":"exact"},{"name":"capsanthin catabolism","type":"exact"},{"name":"capsanthin degradation","type":"exact"}],"termid":"GO:1901808"}


id: PBO:0063944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1","termid":"PBO:0063944"}


id: FYPO:0001062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamine import","termid":"FYPO:0001061"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased glutamine import","synonyms":[{"name":"decreased L-glutamine import","type":"narrow"},{"name":"decreased glutamine import across plasma membrane","type":"exact"},{"name":"decreased glutamine import during mitotic cell cycle","type":"related"},{"name":"decreased glutamine import during vegetative growth","type":"exact"},{"name":"decreased glutamine import into cell","type":"exact"},{"name":"decreased glutamine uptake","type":"exact"},{"name":"reduced glutamine import","type":"exact"}],"termid":"FYPO:0001062"}


id: _global:causally_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: PBO:0072776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A like 1","termid":"PBO:0072776"}


id: PR:000037317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex that is composed of a dimer of phosphorylated Crb2.","definition_xrefs":["PomBase:AL","PMID:24074952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crb2 dimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"DNA repair protein rhp9 dimer","type":"exact"}],"termid":"PR:000037317"}


id: PBO:0046776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 2","termid":"PBO:0046776"}


id: PBO:0038984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 2A","termid":"PBO:0038984"}


id: GO:0015213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of uridine, uracil riboside, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"uridine transmembrane transporter activity","synonyms":[{"name":"uracil/uridine permease activity","type":"narrow"}],"termid":"GO:0015213"}


id: PBO:0064712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 48","termid":"PBO:0064712"}


id: MOD:00943
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:476","PubMed:12643539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-trimethylammoniumbutanoyl derivatized residue","synonyms":[{"name":"4-trimethyllammoniumbutyryl-","type":"related"},{"name":"TMAB","type":"related"}],"termid":"MOD:00943"}


id: PBO:0058222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4512","termid":"PBO:0058222"}


id: GO:0042846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycol, a diol in which the two hydroxy groups are on different carbon atoms, usually but not necessarily adjacent.","definition_xrefs":["Wikipedia:Ethylene_glycol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycol catabolic process","synonyms":[{"name":"dihydric alcohol catabolic process","type":"broad"},{"name":"dihydric alcohol catabolism","type":"broad"},{"name":"glycol breakdown","type":"exact"},{"name":"glycol catabolism","type":"exact"},{"name":"glycol degradation","type":"exact"}],"termid":"GO:0042846"}


id: PBO:0005758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Swc5","termid":"PBO:0005758"}


id: GO:0140403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214","PMID:30584105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"},{"relation_name":"is_a","term_name":"effector-mediated suppression of host defense response","termid":"GO:0140590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host innate immune response","synonyms":[{"name":"effector dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector triggered suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immune response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immunity","type":"exact"},{"name":"effector-triggered suppression of host immune innate response by symbiont","type":"exact"}],"termid":"GO:0140403"}


id: PBO:0074002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 3","termid":"PBO:0074002"}


id: PATO:0000625
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being reversed in position, order, or condition.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","synonyms":[{"name":"backward","type":"related"},{"name":"reversed","type":"related"}],"termid":"PATO:0000625"}


id: GO:0021595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the rhombomere structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere structural organization","synonyms":[{"name":"rhombomere structural organisation","type":"exact"}],"termid":"GO:0021595"}


id: PBO:0075836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 4","termid":"PBO:0075836"}


id: PBO:0028487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0028487"}


id: GO:0045181
data:
  {"annotated_genes":["SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + NAD(P)+ = L-glutamine + 2-oxoglutarate + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.13","EC:1.4.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutamate synthase activity, NAD(P)H as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamate synthase activity, NADH or NADPH as acceptor","type":"related"}],"termid":"GO:0045181","terms_by_termid":{"GO:0016040":null}}


id: PBO:0072574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase M2 polypeptide pseudogene 2","termid":"PBO:0072574"}


id: MOD:01768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoleyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoleylated residue","termid":"MOD:01768"}


id: PBO:0049128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRC5D and HEBP1 antisense RNA 1","termid":"PBO:0049128"}


id: PBO:0088415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex, cyclin-dependent protein kinase subunit Srb10","termid":"PBO:0088415"}


id: GO:0045116
data:
  {"annotated_genes":["SJAG_01018","SJAG_05297","SJAG_00033","SJAG_00615","SJAG_03950","SJAG_00878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85350,90672,92557,98925,108361,114398],"is_not":false,"summary":null,"term":"GO:0045116"}]},"cv_name":"biological_process","definition":"Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein.","definition_xrefs":["PMID:11698580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00615":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_03950":null,"SJAG_05297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein neddylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019943"],"synonyms":[{"name":"RUB1-protein conjugation","type":"exact"}],"termid":"GO:0045116","terms_by_termid":{"GO:0045116":null}}


id: PBO:0054611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2016","termid":"PBO:0054611"}


id: PBO:0089259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 GTPase complex scaffold subunit Scd2","termid":"PBO:0089259"}


id: PBO:0041391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 60","termid":"PBO:0041391"}


id: GO:0055045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the antipodal cells undergo programmed cell death.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antipodal cell degeneration","termid":"GO:0055045"}


id: PBO:0086240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes to sites of polarized growth; required for selection and/or maintenance of polarized growth sites, may modulate signaling by the GTPases Cdc42p and Rho1p; contains LIM domains and has similarity to metazoan paxillin; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0086240"}


id: GO:0002582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002582"}


id: SO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as pyrrolysine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_pyrrolysine","termid":"SO:0000884"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_pyrrolysine","synonyms":[{"name":"gene with stop codon redefined as pyrrolysine","type":"exact"}],"termid":"SO:0000698"}


id: PBO:0088503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L34","termid":"PBO:0088503"}


id: PBO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor protein (predicted)","termid":"PBO:0002384"}


id: GO:0018574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dichlorohydroquinone + O2 + H2O = HCl + 2 H+ + 2-chloromaleylacetate.","definition_xrefs":["UM-BBD_enzymeID:e0422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,6-dichloro-p-hydroquinone 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018574"}


id: GO:1904617
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101182,91362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin binding.","definition_xrefs":["PMID:8621557","GOC:mr","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of actin binding","termid":"GO:1904616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of actin binding","type":"exact"},{"name":"down regulation of membrane associated actin binding","type":"narrow"},{"name":"down-regulation of actin binding","type":"exact"},{"name":"down-regulation of membrane associated actin binding","type":"narrow"},{"name":"downregulation of actin binding","type":"exact"},{"name":"downregulation of membrane associated actin binding","type":"narrow"},{"name":"inhibition of actin binding","type":"narrow"},{"name":"inhibition of membrane associated actin binding","type":"narrow"},{"name":"negative regulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904617","terms_by_termid":{"GO:1904530":null}}


id: GO:0071846
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86963],"is_not":false,"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"An actin filament severing process that results in the removal of actin filament branches specifically at the branch points.","definition_xrefs":["GOC:jh","GOC:mah","PMID:20362448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament debranching","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071846","terms_by_termid":{"GO:0071846":null}}


id: PBO:0082124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid phosphatase; involved in the non-vesicular transport of sterols in both directions between the endoplasmic reticulum and plasma membrane; deletion confers sensitivity to nickel","termid":"PBO:0082124"}


id: GO:1902093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flagellated sperm motility.","definition_xrefs":["PMID:7513657","GOC:jh2","GOC:TermGenie","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cilium movement","termid":"GO:0003353"},{"relation_name":"is_a","term_name":"regulation of flagellated sperm motility","termid":"GO:1901317"},{"relation_name":"is_a","term_name":"positive regulation of cilium-dependent cell motility","termid":"GO:2000155"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flagellated sperm motility","synonyms":[{"name":"activation of sperm motility","type":"narrow"},{"name":"activation of sperm movement","type":"broad"},{"name":"positive regulation of sperm motility","type":"broad"},{"name":"positive regulation of sperm movement","type":"broad"},{"name":"up regulation of sperm motility","type":"broad"},{"name":"up regulation of sperm movement","type":"broad"},{"name":"up-regulation of sperm motility","type":"broad"},{"name":"up-regulation of sperm movement","type":"broad"},{"name":"upregulation of sperm motility","type":"broad"},{"name":"upregulation of sperm movement","type":"broad"}],"termid":"GO:1902093"}


id: GO:1905134
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["PMID:15620645","GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic chromosome separation","termid":"GO:1905132"},{"relation_name":"is_a","term_name":"positive regulation of chromosome separation","termid":"GO:1905820"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of chromosome separation during meiosis","type":"narrow"},{"name":"activation of meiotic chromosome resolution","type":"narrow"},{"name":"activation of meiotic chromosome separation","type":"narrow"},{"name":"positive regulation of chromosome separation during meiosis","type":"exact"},{"name":"positive regulation of meiotic chromosome resolution","type":"exact"},{"name":"up regulation of chromosome separation during meiosis","type":"exact"},{"name":"up regulation of meiotic chromosome resolution","type":"exact"},{"name":"up regulation of meiotic chromosome separation","type":"exact"},{"name":"up-regulation of chromosome separation during meiosis","type":"exact"},{"name":"up-regulation of meiotic chromosome resolution","type":"exact"},{"name":"up-regulation of meiotic chromosome separation","type":"exact"},{"name":"upregulation of chromosome separation during meiosis","type":"exact"},{"name":"upregulation of meiotic chromosome resolution","type":"exact"},{"name":"upregulation of meiotic chromosome separation","type":"exact"}],"termid":"GO:1905134","terms_by_termid":{"GO:1905191":null}}


id: GO:0019403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactitol metabolic process","termid":"GO:0019402"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"galactitol biosynthetic process","synonyms":[{"name":"galactitol anabolism","type":"exact"},{"name":"galactitol biosynthesis","type":"exact"},{"name":"galactitol formation","type":"exact"},{"name":"galactitol synthesis","type":"exact"}],"termid":"GO:0019403"}


id: PBO:0049157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2B","termid":"PBO:0049157"}


id: MOD:01307
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:332#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphate labeled with biotin-HPDP","termid":"MOD:00639"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphate labeled with biotin-HPDP -site S","synonyms":[{"name":"Thiophos-S-S-biotin","type":"related"},{"name":"thiophosphate labeled with biotin-HPDP","type":"related"}],"termid":"MOD:01307"}


id: SO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a start codon other than AUG.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"contains","term_name":"non_canonical_start_codon","termid":"SO:0000680"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_non_canonical_start_codon","synonyms":[{"name":"gene with non canonical start codon","type":"exact"}],"termid":"SO:0001739"}


id: PBO:0056427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 2","termid":"PBO:0056427"}


id: PBO:0064445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC1B-GALNT4 readthrough","termid":"PBO:0064445"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: PBO:0091367
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rad51delta single mutant","termid":"PBO:0091367"}


id: FYPO:0002827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"decreased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"decreased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0002827"}


id: FYPO:0007155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell cycle checkpoint phenotype in which the mitotic spindle assembly checkpoint is activated at an abnormal location. The mitotic spindle assembly checkpoint is normally activated at kinetochores, and delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ectopic activation of mitotic cell cycle spindle assembly checkpoint (obsolete FYPO:0007155)","synonyms":[{"name":"ectopic mitotic cell cycle spindle assembly checkpoint activation","type":"exact"}],"termid":"FYPO:0007155"}


id: FYPO:0006066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more alpha/beta tubulin heterodimers does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished tubulin heterodimer binding","synonyms":[{"name":"abolished protein-protein interaction with tubulin dimer","type":"exact"},{"name":"abolished protein-protein interaction with tubulin heterodimer","type":"exact"},{"name":"abolished tubulin dimer binding","type":"exact"},{"name":"tubulin heterodimer binding abolished","type":"exact"}],"termid":"FYPO:0006066"}


id: FYPO:0007768
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[115423,115425,115421,115422],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which heterochromatin tethering at the nuclear periphery is abnormal. Normally, heterochromatic parts of chromosomes, such as centromeres and telomeres, are maintained at the nuclear periphery by tethering to the nuclear envelope during all or part of the cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal heterochromatin tethering at nuclear periphery","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892","SJAG_03449","SJAG_01834"],"single_locus_genotype_uniquenames":["vps4delta","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pom152delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal heterochromatin localization to nuclear periphery","type":"related"}],"termid":"FYPO:0007768","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0053306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28A pseudogene 3","termid":"PBO:0053306"}


id: GO:0098945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic active zone membrane (obsolete GO:0098945)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098945"}


id: PBO:0091834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lives If Zapped","termid":"PBO:0091834"}


id: GO:0031324
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id: PBO:0059459
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id: PBO:0003341
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id: PBO:0050921
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id: GO:0002823
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id: PBO:0050470
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id: PBO:0083718
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id: GO:1903419
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