# terms

id: GO:0061067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"negatively_regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dauer larval development","termid":"GO:0061067"}


id: PBO:0047979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member F, pseudogene","termid":"PBO:0047979"}


id: MOD:00706
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts L-tyrosine to 2,3-didehydrotyrosine.","definition_xrefs":["Unimod:401#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenated tyrosine","synonyms":[{"name":"MOD_RES 2,3-didehydrotyrosine","type":"exact"},{"name":"dHTyr","type":"exact"}],"termid":"MOD:00706"}


id: GO:0015362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:2.A.47.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity sodium:dicarboxylate symporter activity","secondary_identifiers":["Reactome:R-HSA-433101"],"synonyms":[{"name":"high affinity sodium:dicarboxylate cotransporter activity","type":"broad"},{"name":"high affinity sodium:dicarboxylate symporter activity","type":"exact"}],"termid":"GO:0015362"}


id: FYPO:0000011
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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cellular process phenotype in which a cell does not proceed normally through a cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"cell cycle 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type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392","SJAG_04464","SJAG_04522","SJAG_04280","SJAG_00118","SJAG_03596","SJAG_00871"],"name":"abnormal cell 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cell-division cycle","type":"exact"},{"name":"cell cycle defects","type":"exact"},{"name":"cell cycle progression: abnormal","type":"related"}],"termid":"FYPO:0000011","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003738":null,"FYPO:0004318":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0008288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a protein bride of sevenless (boss) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824","GO:0038023","GO:0140096","GO:0004672"],"is_obsolete":false,"name":"boss receptor activity","synonyms":[{"name":"sevenless receptor activity","type":"related"}],"termid":"GO:0008288"}


id: GO:0102588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + malonyl-CoA = cyanidin 3-O-(6-O-malonyl-beta-D-glucoside) + coenzyme A.","definition_xrefs":["EC:2.3.1.171","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 6''-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15335"],"termid":"GO:0102588"}


id: PBO:0066516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 1","termid":"PBO:0066516"}


id: PBO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 5","termid":"PBO:0050227"}


id: PBO:0052330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671","termid":"PBO:0052330"}


id: GO:0071556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products that penetrate only the lumenal side of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of lumenal side of endoplasmic reticulum membrane (obsolete GO:0071556)","synonyms":[{"name":"integral to ER membrane, lumenal side","type":"exact"},{"name":"integral to lumenal leaflet of endoplasmic reticulum membrane","type":"exact"},{"name":"integral to lumenal side of ER membrane","type":"exact"},{"name":"integral to lumenal side of endoplasmic reticulum membrane","type":"narrow"}],"termid":"GO:0071556"}


id: PBO:0003333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 7 (predicted)","termid":"PBO:0003333"}


id: PR:Q9Y719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.05","synonyms":[{"name":"Spom972h-mok13","type":"exact"}],"termid":"PR:Q9Y719"}


id: PBO:0090994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase/kynurenine-oxoglutarate transaminase","termid":"PBO:0090994"}


id: GO:0006273
data:
  {"annotated_genes":["SJAG_05197","SJAG_05239","SJAG_00814","SJAG_05232","SJAG_04190","SJAG_02199","SJAG_02294","SJAG_02818","SJAG_03495","SJAG_00618","SJAG_04877","SJAG_02690","SJAG_04183","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93500],"is_not":false,"summary":null,"term":"GO:0006273"},{"annotations":[105157,98883,91309,100281,100965,114185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[91131,96659,96695,88714,88628,97552,100207],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended in a net 3' to 5' direction by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication. Lagging strand DNA elongation proceeds by discontinuous synthesis of short stretches of DNA, known as Okazaki fragments, from RNA primers; these fragments are then joined by DNA ligase. Although each segment of nascent DNA is synthesized in the 5' to 3' direction, the overall direction of lagging strand synthesis is 3' to 5', mirroring the progress of the replication fork.","definition_xrefs":["ISBN:071673706X","ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_00814":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_03495":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"lagging strand elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006273","terms_by_termid":{"GO:0006273":null,"GO:1903459":null,"GO:1903461":null}}


id: PBO:0067035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 49, pseudogene","termid":"PBO:0067035"}


id: SO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Imprinted genes are epigenetically modified genes that are expressed monoallelically according to their parent of origin.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"},{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_imprinted","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Genomic_imprinting"],"synonyms":[{"name":"genomically imprinted","type":"exact"},{"name":"imprinted","type":"broad"}],"termid":"SO:0000134"}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: PBO:0081244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 14","termid":"PBO:0081244"}


id: PBO:0089864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP5 subunit Mod21","termid":"PBO:0089864"}


id: PBO:0067064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 89, pseudogene","termid":"PBO:0067064"}


id: FYECO:0000162
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115108,115457,115458,115459,115460,115461,115462,115463,115474,115475,115464,115478,115480,115303,115352,115470,115471,115472,115473,115109,115106,115467,115468,115302,115479,115481,115355,115420,115440,115110,115469,115107],"is_not":false,"summary":null,"term":"FYECO:0000162"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is high (eg around 8%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01330":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":19,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta 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glucose YES","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_02763","SJAG_04574","SJAG_02594","SJAG_01330","SJAG_01745","SJAG_03356","SJAG_02392","SJAG_00426","SJAG_04061","SJAG_02409","SJAG_03449","SJAG_03916","SJAG_02621"],"single_locus_genotype_uniquenames":["arb2delta","clr4delta","lem2delta","stc1delta","ned1delta","arb1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","rdp1delta","mad2delta","ago1delta","chp1delta","dcr1delta","man1delta"],"synonyms":[{"name":"high glucose rich medium","type":"related"}],"termid":"FYECO:0000162","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0069491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 758, pseudogene","termid":"PBO:0069491"}


id: PBO:0030448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphatase_activity","termid":"PBO:0030448"}


id: PBO:0062271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 2","termid":"PBO:0062271"}


id: PBO:0048049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTCD antisense RNA 1","termid":"PBO:0048049"}


id: GO:1905375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a homocysteine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:26722473","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to homocysteine","termid":"GO:1905374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to homocysteine","synonyms":[{"name":"cellular response to 2-amino-4-mercaptobutyric acid","type":"exact"},{"name":"cellular response to 2-amino-4-sulfanylbutanoic acid","type":"exact"},{"name":"cellular response to Hcy","type":"exact"}],"termid":"GO:1905375"}


id: GO:0160074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex containing CASP4, known as caspase-11 (Casp11) in mouse, which assembles upon cytosolic lipopolysaccharide-binding and directly activates Gasdermin-D (GSDMD).","definition_xrefs":["PMID:33187725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"non-canonical inflammasome complex","termid":"GO:0160074"}


id: PBO:0062941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase, transmembrane","termid":"PBO:0062941"}


id: PBO:0044975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 15","termid":"PBO:0044975"}


id: GO:0017043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A polypeptide hormone which stimulates the adrenal cortex to synthesize and secrete glucocorticoid hormones.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete adrenocorticotropin (obsolete GO:0017043)","synonyms":[{"name":"adrenocorticotropin","type":"exact"},{"name":"corticotropin","type":"broad"}],"termid":"GO:0017043"}


id: PBO:0088084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing substrate adaptor for Cdc48p; ubiquitin regulatory X domain-containing protein that acts as a substrate recruiting cofactor for Cdc48p; positively regulates Glc7p PPase activity to promote growth and mitotic progression in complex with Cdc48p; ubiquitinated protein interactor involved in ER-associated degradation (ERAD); regulated by nuclear Ub-dependent degradation (INMAD pathway) independent of the Asi and Doa10 complexes; homolog of human p47 (NSFL1C)","termid":"PBO:0088084"}


id: PBO:0111753
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndr kinase/myotonic dystrophy kinase/cot1/warts family","termid":"PBO:0111753"}


id: PBO:0066074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 2","termid":"PBO:0066074"}


id: PR:P36607
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad8 gene.","definition_xrefs":["UniProtKB:P36607","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.01c","synonyms":[{"name":"DNA repair protein RAD5 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad8","type":"exact"}],"termid":"PR:P36607"}


id: MOD:01672
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-lysine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated lysine","termid":"MOD:01672"}


id: MOD:00426
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a sulfur with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"S-glycosylated residue","synonyms":[{"name":"SGlycoRes","type":"exact"}],"termid":"MOD:00426"}


id: PBO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily R member 1, pseudogene","termid":"PBO:0062029"}


id: PBO:0077253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 4","termid":"PBO:0077253"}


id: PBO:0066257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 5","termid":"PBO:0066257"}


id: PBO:0069748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1029, pseudogene","termid":"PBO:0069748"}


id: GO:0097209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.","definition_xrefs":["GOC:cjm","Wikipedia:Lamellar_granule"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"epidermal lamellar body","termid":"GO:0097209"}


id: PATO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000472 quality value (obsolete PATO:0000472)","termid":"PATO:0000472"}


id: GO:0034216
data:
  {"annotated_genes":["SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96730],"is_not":false,"summary":null,"term":"GO:0034216"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: thiamine(out) + H+(out) = thiamine(in) + H+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine:proton symporter activity","termid":"GO:0034215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity thiamine:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:proton symporter activity","type":"exact"},{"name":"high-affinity thiamine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0034216","terms_by_termid":{"GO:0034216":null}}


id: GO:0061071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the urethra epithelium over time from its initial formation to the mature structure. The urethra is a renal system organ that carries urine from the bladder to outside the body. The epithelium is the tubular, planar layer of cells through which the urine passes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urethra epithelium development","termid":"GO:0061071"}


id: PBO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 7 pseudogene","termid":"PBO:0062166"}


id: PBO:0038350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_allergic_trigger_for","termid":"PBO:0038350"}


id: GO:0030639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"polyketide biosynthetic process","synonyms":[{"name":"polyketide anabolism","type":"exact"},{"name":"polyketide biosynthesis","type":"exact"},{"name":"polyketide formation","type":"exact"},{"name":"polyketide synthesis","type":"exact"}],"termid":"GO:0030639"}


id: PBO:0046595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 5","termid":"PBO:0046595"}


id: GO:1902373
data:
  {"annotated_genes":["SJAG_00797","SJAG_04825","SJAG_03696","SJAG_03448","SJAG_03283","SJAG_02573","SJAG_03883","SJAG_04946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85191,85586],"is_not":false,"summary":null,"term":"GO:1902373"},{"annotations":[114314,77475,86290,96144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[92321,85585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[85886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA catabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:22626865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA breakdown","type":"exact"},{"name":"down regulation of mRNA catabolic process","type":"exact"},{"name":"down regulation of mRNA catabolism","type":"exact"},{"name":"down regulation of mRNA decay","type":"related"},{"name":"down regulation of mRNA degradation","type":"exact"},{"name":"down-regulation of mRNA breakdown","type":"exact"},{"name":"down-regulation of mRNA catabolic process","type":"exact"},{"name":"down-regulation of mRNA catabolism","type":"exact"},{"name":"down-regulation of mRNA decay","type":"related"},{"name":"down-regulation of mRNA degradation","type":"exact"},{"name":"downregulation of mRNA breakdown","type":"exact"},{"name":"downregulation of mRNA catabolic process","type":"exact"},{"name":"downregulation of mRNA catabolism","type":"exact"},{"name":"downregulation of mRNA decay","type":"related"},{"name":"downregulation of mRNA degradation","type":"exact"},{"name":"inhibition of mRNA breakdown","type":"narrow"},{"name":"inhibition of mRNA catabolic process","type":"narrow"},{"name":"inhibition of mRNA catabolism","type":"narrow"},{"name":"inhibition of mRNA decay","type":"related"},{"name":"inhibition of mRNA degradation","type":"narrow"},{"name":"negative regulation of mRNA breakdown","type":"exact"},{"name":"negative regulation of mRNA catabolism","type":"exact"},{"name":"negative regulation of mRNA decay","type":"related"},{"name":"negative regulation of mRNA degradation","type":"exact"}],"termid":"GO:1902373","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0120271":null,"GO:1902373":null}}


id: PBO:0067812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 114","termid":"PBO:0067812"}


id: PBO:0043858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP2 and RIPK1 domain containing adaptor with death domain","termid":"PBO:0043858"}


id: GO:1990722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A serine/threonine protein kinase complex involved in cell survival, apoptosis and autophagic cell death pathways. DAPK1 is activated by the dephosphorylation of a n-terminal serine and calcium-calmodulin binding.","definition_xrefs":["PMID:20103772","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DAPK1-calmodulin complex","synonyms":[{"name":"death-associated protein kinase 1 - calmodulin complex","type":"exact"}],"termid":"GO:1990722"}


id: PBO:0041192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1B-PAK6 readthrough","termid":"PBO:0041192"}


id: PBO:0040377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit F6","termid":"PBO:0040377"}


id: PBO:0051565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12 receptor subunit beta 2","termid":"PBO:0051565"}


id: PBO:0048358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 69","termid":"PBO:0048358"}


id: GO:0009622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to pathogenic fungi (obsolete GO:0009622)","synonyms":[{"name":"resistance to pathogenic fungi","type":"exact"}],"termid":"GO:0009622"}


id: FYPO:0002787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles","synonyms":[{"name":"decreased vacuole size","type":"exact"},{"name":"reduced vacuole size","type":"exact"}],"termid":"FYPO:0002787"}


id: PBO:0067727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 25","termid":"PBO:0067727"}


id: GO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: PBO:0084554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084554"}


id: GO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of norepinephrine secretion","synonyms":[{"name":"regulation of noradrenaline secretion","type":"exact"}],"termid":"GO:0014061"}


id: GO:0002951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction leukotriene C(4) + H2O= leukotriene D(4) + L-glutamate.","definition_xrefs":["PMID:9774450","RHEA:31563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"leukotriene-C(4) hydrolase","secondary_identifiers":["EC:3.4.19.14"],"termid":"GO:0002951"}


id: PBO:0081151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP91 zinc finger protein, atypical E3 ubiquitin ligase","termid":"PBO:0081151"}


id: PBO:0029527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation_during_cellular_response_to_cadmium_ion","termid":"PBO:0029527"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: GO:0046706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CDP metabolic process","termid":"GO:0046704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CDP catabolic process","synonyms":[{"name":"CDP breakdown","type":"exact"},{"name":"CDP catabolism","type":"exact"},{"name":"CDP degradation","type":"exact"}],"termid":"GO:0046706"}


id: PBO:0062682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 3 pseudogene","termid":"PBO:0062682"}


id: GO:0060595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a fibroblast growth factor to its receptor on the surface of al cell in the epidermis resulting in the formation of the mammary line. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["GOC:dph","PMID:16168142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"mammary gland specification","termid":"GO:0060594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in mammary gland specification","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in mammary gland specification","type":"exact"}],"termid":"GO:0060595"}


id: PBO:0040013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 2","termid":"PBO:0040013"}


id: PBO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NLS","termid":"PBO:0000336"}


id: PBO:0073661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 1","termid":"PBO:0073661"}


id: GO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor of a target cell. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:12855817","PMID:12524386","PMID:12467241","GOC:add","GO_REF:0000022","PMID:15728447","ISBN:0781735149","PMID:15585605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor signaling pathway","synonyms":[{"name":"TLR signaling pathway","type":"exact"},{"name":"toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002224"}


id: PR:O74995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH basal transcription factor complex p47 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.07","secondary_identifiers":["UniProtKB:O74995"],"synonyms":[{"name":"SPCC1682.07","type":"related"},{"name":"SSL1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H2","type":"exact"},{"name":"ssl1","type":"related"},{"name":"suppressor of stem-loop protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74995"}


id: GO:0016345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during female meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"female meiosis chromosome segregation","termid":"GO:0016321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013","GO:0051179"],"is_obsolete":false,"name":"female meiotic chromosome movement towards spindle pole","synonyms":[{"name":"chromosome movement towards spindle pole during female meiosis","type":"exact"},{"name":"female meiotic chromosome movement","type":"broad"},{"name":"female meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016345"}


id: GO:0034353
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87769],"is_not":false,"summary":null,"term":"GO:0034353"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a 5' terminal diphosphate from the 5'-triphosphate end of an mRNA, leaving a 5'-monophosphate end.","definition_xrefs":["PMID:18202662","PMID:17612492","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"mRNA 5'-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA pyrophosphohydrolase activity","type":"broad"}],"termid":"GO:0034353","terms_by_termid":{"GO:0034353":null}}


id: GO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An occluding cell-cell junction formed between the membranes of the apical end of an invading cell (e.g. a merozoite in Plasmodium) and a host target cell (e.g. erythrocyte for Plasmodium infection). The junction is a stable yet dynamic structure that moves around the symbiont cell during invasion, enclosing it in a vacuole surrounded by a membrane.","definition_xrefs":["GOC:jl","PMID:21803641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicellular tight junction","termid":"GO:0005923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host-symbiont bicellular tight junction","synonyms":[{"name":"host-parasite tight junction","type":"exact"},{"name":"host-pathogen tight junction","type":"exact"}],"termid":"GO:0044647"}


id: PBO:0046164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 4","termid":"PBO:0046164"}


id: PBO:0004665
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea-acanthocytosis","termid":"PBO:0004665"}


id: PBO:0005786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nic96 homolog","termid":"PBO:0005786"}


id: PBO:0026865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_mitotic_S_phase","termid":"PBO:0026865"}


id: GO:0071343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071343)","synonyms":[{"name":"negative regulation of establishment of actomyosin contractile ring localization","type":"exact"},{"name":"negative regulation of establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0071343"}


id: GO:0018285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 2Fe-2S iron-sulfur cluster via tetrakis-L-cysteinyl diiron disulfide.","definition_xrefs":["RESID:AA0137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl diiron disulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tetrakis-L-cysteinyl diiron disulphide","type":"exact"}],"termid":"GO:0018285"}


id: PBO:0068677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 58, pseudogene","termid":"PBO:0068677"}


id: GO:1901820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-zeacarotene.","definition_xrefs":["PMID:6060456","GOC:yaf","UniPathway:UPA00804","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"alpha-zeacarotene catabolic process","synonyms":[{"name":"alpha-zeacarotene breakdown","type":"exact"},{"name":"alpha-zeacarotene catabolism","type":"exact"},{"name":"alpha-zeacarotene degradation","type":"exact"}],"termid":"GO:1901820"}


id: PBO:0014597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex corepressor Yox1","termid":"PBO:0014597"}


id: GO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids that contributes to endoplasmic reticulum membrane organization.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006629"],"is_obsolete":false,"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization","synonyms":[{"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090159"}


id: PBO:0045948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor","termid":"PBO:0045948"}


id: GO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome bc1 complex","type":"narrow"}],"termid":"GO:0045156"}


id: GO:0019622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"3-(3-hydroxy)phenylpropionate metabolic process","termid":"GO:0046435"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate catabolic process","secondary_identifiers":["MetaCyc:HCAMHPDEG-PWY"],"synonyms":[{"name":"3-(3-hydroxy)phenylpropionate breakdown","type":"exact"},{"name":"3-(3-hydroxy)phenylpropionate catabolism","type":"exact"},{"name":"3-(3-hydroxy)phenylpropionate degradation","type":"exact"}],"termid":"GO:0019622"}


id: PBO:0049559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 21","termid":"PBO:0049559"}


id: MOD:00829
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-serine residue by an ester bond to form S-(L-phenylalaninyl)-L-serine.","definition_xrefs":["RESID:AA0418","PubMed:12591958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-phenylalanyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]oxy)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl serine ester (Ser-Phe)","type":"exact"},{"name":"O-(2-amino-3-phenylpropanoyl)serine","type":"exact"},{"name":"O-(L-phenylalanyl)-L-serine","type":"exact"},{"name":"XLNK1PheOSer","type":"exact"},{"name":"phenylalanine serine ester","type":"exact"}],"termid":"MOD:00829"}


id: GO:0075519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or viral particle within the host cell cytoplasm along host microtubules. Microtubule-dependent transport involves motor proteins like dynein and kinesin and is mostly used by viruses that target their genomes to the nucleus.","definition_xrefs":["VZ:983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"}


id: GO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002590"}


id: GO:0048162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when many layers of follicle cells surround the oocyte. There is a yolk nucleus (Balbiani's Body) near the germinal vesicle.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198542771","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-layer follicle stage","synonyms":[{"name":"mammalian oogenesis stage 5","type":"exact"}],"termid":"GO:0048162"}


id: PR:P87237
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4G3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C4G3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.12c","synonyms":[{"name":"Spom972h-SPCC4G3.12c","type":"exact"}],"termid":"PR:P87237"}


id: GO:1900503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulosome assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"cellulosome assembly","termid":"GO:0044575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cellulosome assembly","termid":"GO:1900503"}


id: PBO:0091576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein adenylyltransferase SelO","termid":"PBO:0091576"}


id: MOD:00563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminogalactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated","termid":"MOD:00734"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylaminogalactosylated residue","synonyms":[{"name":"GalNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00563"}


id: GO:0048338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"mesoderm morphogenesis","termid":"GO:0048332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm structural organization","synonyms":[{"name":"mesoderm structural organisation","type":"exact"}],"termid":"GO:0048338"}


id: PBO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient overexpression of cif1 induces a stable state of viability in the absence of calnexin","termid":"PBO:0005158"}


id: GO:0048280
data:
  {"annotated_genes":["SJAG_00557","SJAG_04023","SJAG_01633","SJAG_03670"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91632,104074,105856,113638],"is_not":false,"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00557":null,"SJAG_01633":null,"SJAG_03670":null,"SJAG_04023":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion with Golgi apparatus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048280","terms_by_termid":{"GO:0048280":null}}


id: GO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"kidney rudiment formation","termid":"GO:0072003"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros formation","synonyms":[{"name":"pronephric kidney formation","type":"exact"}],"termid":"GO:0072116"}


id: PBO:0075802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La","termid":"PBO:0075802"}


id: GO:0140192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140192)","termid":"GO:0140192"}


id: GO:0102299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-linolenate + O2 = (9R,10E,12Z,15Z)-9-hydroperoxyoctadeca-10,12,15-trienoate.","definition_xrefs":["EC:1.13.11.61","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"linolenate 9R-lipoxygenase activity","secondary_identifiers":["MetaCyc:RXN-12759","RHEA:31687"],"termid":"GO:0102299"}


id: PBO:0067262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 336, pseudogene","termid":"PBO:0067262"}


id: GO:1904309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:21597460","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cordycepin","synonyms":[{"name":"response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904309"}


id: PBO:0077744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript overexpressed in dedifferentiated liposarcoma","termid":"PBO:0077744"}


id: GO:1903654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:19328067"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903654)","termid":"GO:1903654"}


id: PBO:0034582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_lysed_cell","termid":"PBO:0034582"}


id: GO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed germinates before being shed from the parent plant.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed germination on parent plant","synonyms":[{"name":"non-vegetative vivipary","type":"broad"},{"name":"pre-harvest sprouting","type":"exact"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048623"}


id: PBO:0049384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 6","termid":"PBO:0049384"}


id: SO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glutaminyl tRNA (SO:0000260).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic_acid_tRNA_primary_transcript","synonyms":[{"name":"glutamic acid tRNA primary transcript","type":"exact"}],"termid":"SO:0000216"}


id: GO:0033403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"UUA codon-amino acid adaptor activity","synonyms":[{"name":"TTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033403"}


id: GO:0014709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"positively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somitomeric trunk muscle development","termid":"GO:0014709"}


id: PBO:0053638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 685","termid":"PBO:0053638"}


id: PBO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 3 pseudogene 1","termid":"PBO:0061112"}


id: PBO:0041332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3","termid":"PBO:0041332"}


id: RO:HOM0000042
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is based on recent shared ancestry, characterizing a monophyletic group.","definition_xrefs":["ISBN:978-0252068140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_apomorphy_relationship_with","synonyms":[{"name":"apomorphous to","type":"exact"},{"name":"synapomorphy","type":"related"}],"termid":"RO:HOM0000042"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["GOC:PARL","PMID:21785459","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


id: PBO:0075688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRC kinase signaling inhibitor 1","termid":"PBO:0075688"}


id: GO:2000957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cyclodextrin catabolic process","synonyms":[{"name":"regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000957"}


id: GO:0006030
data:
  {"annotated_genes":["SJAG_03723","SJAG_04728","SJAG_00620","SJAG_00442","SJAG_04868","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[100700,84822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006038"},{"annotations":[84823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"},{"annotations":[84312,84651,98840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034221"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"beta-1,4-linked N-acetylglucosamine metabolic process","type":"exact"},{"name":"beta-1,4-linked N-acetylglucosamine metabolism","type":"exact"},{"name":"chitin metabolism","type":"exact"}],"termid":"GO:0006030","terms_by_termid":{"GO:0006031":null,"GO:0006038":null,"GO:0034221":null,"GO:0034232":null}}


id: PBO:0086369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aminopeptidase; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole","termid":"PBO:0086369"}


id: PBO:0048393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1","termid":"PBO:0048393"}


id: PBO:0078542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 34","termid":"PBO:0078542"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: PBO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein alpha-2 subunit Gpa2","termid":"PBO:0001588"}


id: PBO:0029687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_ion_starvation-repressed_proteins","termid":"PBO:0029687"}


id: PBO:0052517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL30 antisense RNA 1","termid":"PBO:0052517"}


id: PBO:0068405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 224","termid":"PBO:0068405"}


id: PBO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1 (predicted)","termid":"PBO:0002552"}


id: PBO:0089929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding protein upregulated in meiosis II","termid":"PBO:0089929"}


id: PBO:0054022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1353","termid":"PBO:0054022"}


id: GO:0016233
data:
  {"annotated_genes":["SJAG_02194","SJAG_01777","SJAG_01378","SJAG_04245","SJAG_02362","SJAG_03092","SJAG_01864","SJAG_03685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85867,87905,91163,95771,101138,106413,110647,111985],"is_not":false,"summary":null,"term":"GO:0016233"},{"annotations":[85866,101137],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031848"}]},"cv_name":"biological_process","definition":"A process in which telomeres are protected from degradation and fusion, thereby ensuring chromosome stability by protecting the ends from both degradation and from being recognized as damaged DNA. May be mediated by specific single- or double-stranded telomeric DNA binding proteins.","definition_xrefs":["GOC:rn","GOC:mah","PMID:11349150","PMID:11352055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_04245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere capping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomere end protection","type":"exact"}],"termid":"GO:0016233","terms_by_termid":{"GO:0016233":null,"GO:0031848":null}}


id: GO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyroxine (T4) or triiodothyronine (T3), tyrosine-based hormones produced by the thyroid gland.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thyroid hormone binding","synonyms":[{"name":"thyroxine binding","type":"narrow"},{"name":"triiodothyronine binding","type":"narrow"}],"termid":"GO:0070324"}


id: PBO:0054660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2066","termid":"PBO:0054660"}


id: PBO:0067133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 181, pseudogene","termid":"PBO:0067133"}


id: GO:0062155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that serves as a channel for the secretion of curli. Curli are a fibers that serve as a major component of the extracellular matrix of pellicle biofilms.","definition_xrefs":["PMID:25219853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"curli secretion complex","termid":"GO:0062155"}


id: GO:1902910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of melanosome transport.","definition_xrefs":["PMID:23334344","GOC:als","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of melanosome transport","termid":"GO:1902908"},{"relation_name":"positively_regulates","term_name":"melanosome transport","termid":"GO:0032402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of melanosome transport","synonyms":[{"name":"activation of melanosome transport","type":"narrow"},{"name":"up regulation of melanosome transport","type":"exact"},{"name":"up-regulation of melanosome transport","type":"exact"},{"name":"upregulation of melanosome transport","type":"exact"}],"termid":"GO:1902910"}


id: PBO:0053670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 851","termid":"PBO:0053670"}


id: GO:0102787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-beta-D-caffeoylglucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"caffeoyl-CoA:pelargonidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7997"],"termid":"GO:0102787"}


id: GO:0060506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein. This process contributes to lung development.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in lung development","synonyms":[{"name":"hedgehog signaling pathway involved in lung development","type":"exact"},{"name":"hh signaling pathway involved in lung development","type":"exact"},{"name":"smoothened signalling pathway involved in lung development","type":"exact"}],"termid":"GO:0060506"}


id: PBO:0051837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase M","termid":"PBO:0051837"}


id: FYPO:0007029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to polysomes is decreased.","definition_xrefs":["PomBase:mah","PMID:31285271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to polysome","synonyms":[{"name":"decreased protein localisation to polysome","type":"exact"},{"name":"decreased protein localization to polyribosome","type":"exact"},{"name":"decreased protein localization to polysome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to polysome during vegetative growth","type":"exact"},{"name":"reduced protein localization to polysome","type":"exact"}],"termid":"FYPO:0007029"}


id: GO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An anaphase promoting complex bound to the fizzy family APC activator Cdc20/Slp1 which regulates the metaphase anaphase transition by activating the APC/C to target the anaphase inhibitor securin and promotes sister chromatid separation.","definition_xrefs":["PMID:10921876","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete APC-Cdc20 complex (obsolete GO:0090620)","synonyms":[{"name":"APC-Slp1 complex","type":"exact"},{"name":"APC-fizzy complex","type":"exact"},{"name":"mitotic anaphase promotic complex","type":"related"}],"termid":"GO:0090620"}


id: GO:0042696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The beginning of the menstrual cycle; the first menstrual cycle in an individual.","definition_xrefs":["GOC:curators","PMID:16311040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menarche","secondary_identifiers":["Wikipedia:Menarche"],"termid":"GO:0042696"}


id: GO:0009092
data:
  {"annotated_genes":["SJAG_00395","SJAG_03152","SJAG_03102","SJAG_03671","SJAG_04305","SJAG_02290","SJAG_00881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97944,107131],"is_not":false,"summary":null,"term":"GO:0009092"},{"annotations":[102026,108008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[96720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_00881":null,"SJAG_02290":null,"SJAG_03102":null,"SJAG_03152":null,"SJAG_03671":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"homoserine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homoserine metabolism","type":"exact"}],"termid":"GO:0009092","terms_by_termid":{"GO:0009090":null,"GO:0009092":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null}}


id: PR:P40386
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi4 gene.","definition_xrefs":["UniProtKB:P40386","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine biosynthetic bifunctional enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.10c","synonyms":[{"name":"Spom972h-thi4","type":"exact"}],"termid":"PR:P40386"}


id: PBO:0057692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1282","termid":"PBO:0057692"}


id: GO:0004038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allantoin + H2O = allantoate.","definition_xrefs":["EC:3.5.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"allantoinase activity","secondary_identifiers":["RHEA:17029","MetaCyc:ALLANTOINASE-RXN"],"synonyms":[{"name":"(S)-allantoin amidohydrolase activity","type":"related"}],"termid":"GO:0004038"}


id: PBO:0004776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup120","termid":"PBO:0004776"}


id: PBO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031448"}


id: PBO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 21","termid":"PBO:0047570"}


id: PR:O74839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msy1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MscS family protein C1183.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.11","synonyms":[{"name":"Spom972h-msy1","type":"exact"}],"termid":"PR:O74839"}


id: PBO:0040460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase 13A3","termid":"PBO:0040460"}


id: PBO:0041708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 3","termid":"PBO:0041708"}


id: PBO:0054242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1624","termid":"PBO:0054242"}


id: PBO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (predicted)","termid":"PBO:0000263"}


id: PBO:0012236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A Ppa1","termid":"PBO:0012236"}


id: PBO:0050753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 15","termid":"PBO:0050753"}


id: PBO:0044952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone)","termid":"PBO:0044952"}


id: PBO:0109391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 20","termid":"PBO:0109391"}


id: PR:O42940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transport protein pho88 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.04","synonyms":[{"name":"Spom972h-SPBC16H5.04","type":"exact"},{"name":"phosphate metabolism protein pho88 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42940"}


id: PBO:0086141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for N-glycan mannosylphosphorylation; non-essential gene; transcription repressed by Rm101p; MNN14 has a paralog, MNN4, that arose from the whole genome duplication","termid":"PBO:0086141"}


id: GO:0099560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"synaptic membrane adhesion","synonyms":[{"name":"synapse adhesion between pre- and post-synapse","type":"exact"}],"termid":"GO:0099560"}


id: GO:1903824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere single strand break repair.","definition_xrefs":["GOC:TermGenie","PMID:24374808","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single strand break repair","termid":"GO:1903517"},{"relation_name":"negatively_regulates","term_name":"telomere single strand break repair","termid":"GO:1903823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomere single strand break repair","synonyms":[{"name":"down regulation of single strand break repair in telomere","type":"exact"},{"name":"down regulation of telomere SSBR","type":"related"},{"name":"down regulation of telomere single strand break repair","type":"exact"},{"name":"down regulation of telomere single-strand break repair","type":"exact"},{"name":"down regulation of telomeric single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair in telomere","type":"exact"},{"name":"down-regulation of telomere SSBR","type":"related"},{"name":"down-regulation of telomere single strand break repair","type":"exact"},{"name":"down-regulation of telomere single-strand break repair","type":"exact"},{"name":"down-regulation of telomeric single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair in telomere","type":"exact"},{"name":"downregulation of telomere SSBR","type":"related"},{"name":"downregulation of telomere single strand break repair","type":"exact"},{"name":"downregulation of telomere single-strand break repair","type":"exact"},{"name":"downregulation of telomeric single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair in telomere","type":"narrow"},{"name":"inhibition of telomere SSBR","type":"related"},{"name":"inhibition of telomere single strand break repair","type":"narrow"},{"name":"inhibition of telomere single-strand break repair","type":"narrow"},{"name":"inhibition of telomeric single strand break repair","type":"narrow"},{"name":"negative regulation of single strand break repair in telomere","type":"exact"},{"name":"negative regulation of telomere SSBR","type":"related"},{"name":"negative regulation of telomere single-strand break repair","type":"exact"},{"name":"negative regulation of telomeric single strand break repair","type":"exact"}],"termid":"GO:1903824"}


id: SO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic SSU rRNA is an RNA component of the small subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_small_subunit_primary_transcript","termid":"SO:0000255"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA","synonyms":[{"name":"cytosolic SSU rRNA","type":"exact"},{"name":"cytosolic SSU ribosomal RNA","type":"exact"},{"name":"cytosolic small subunit rRNA","type":"exact"}],"termid":"SO:0000650"}


id: PR:000050476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469/Thr-473, PR:000026291.","definition_xrefs":["PMID:12181336","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/UnPhos:(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/UnPhos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469/Thr-473, PR:000026291","type":"narrow"},{"name":"wis1/UnPhos:(S469,T473)","type":"exact"}],"termid":"PR:000050476"}


id: GO:0097569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Region of the ventral side of the cell body found in Giardia species (trophozoite stage). It is located posterior on either side of the ventral groove; the upper boundary is the ventral disc, and the lower boundary is marked by the posteriolateral flagella.","definition_xrefs":["GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral shield","termid":"GO:0097569"}


id: PBO:0073852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 2","termid":"PBO:0073852"}


id: GO:0005794
data:
  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membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. 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apparatus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:31956022":null},"secondary_identifiers":["Wikipedia:Golgi_apparatus","NIF_Subcellular:sao451912436"],"synonyms":[{"name":"Golgi","type":"broad"},{"name":"Golgi complex","type":"exact"},{"name":"Golgi ribbon","type":"narrow"}],"termid":"GO:0005794","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0000139":null,"GO:0000938":null,"GO:0005794":null,"GO:0005795":null,"GO:0005796":null,"GO:0005797":null,"GO:0005801":null,"GO:0005802":null,"GO:0017119":null,"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0031985":null,"GO:0032588":null,"GO:0033106":null,"GO:0034044":null,"GO:0034066":null,"GO:0070916":null,"GO:0140497":null,"GO:1990071":null,"GO:1990072":null}}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: PBO:0051542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6R antisense RNA 1","termid":"PBO:0051542"}


id: PBO:0075904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5","termid":"PBO:0075904"}


id: FYPO:0006855
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 37 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H3-K37 methylation","synonyms":[{"name":"abnormal histone H3 K37 methylation","type":"exact"},{"name":"abnormal histone H3K37me","type":"exact"},{"name":"abnormal histone lysine H3 K37 methylation","type":"exact"}],"termid":"FYPO:0006855"}


id: FYPO:0001106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000002","FYPO:0005447","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal glutathione-disulfide reductase activity","synonyms":[{"name":"abnormal glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001106"}


id: PBO:0043394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X9-C motif containing 1","termid":"PBO:0043394"}


id: GO:0061369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis in the testicle.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of testicular blood vessel morphogenesis","synonyms":[{"name":"negative regulation of testicular vasculature morphogenesis","type":"broad"}],"termid":"GO:0061369"}


id: MOD:01729
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01729"}


id: PATO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior to","synonyms":[{"name":"preceding","type":"exact"},{"name":"ventral_to","type":"exact"}],"termid":"PATO:0001632"}


id: GO:0034191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apolipoprotein A-I receptor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apolipoprotein receptor binding","termid":"GO:0034190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"apolipoprotein A-I receptor binding","termid":"GO:0034191"}


id: PBO:0080018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 4","termid":"PBO:0080018"}


id: PBO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SPO13","termid":"PBO:0018248"}


id: PBO:0056115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLAL1 divergent transcript","termid":"PBO:0056115"}


id: PBO:0088596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Moc3","termid":"PBO:0088596"}


id: PBO:0046050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 3","termid":"PBO:0046050"}


id: GO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or temporarily subverts the host intercellular junction. Intercellular junction include tight junctions and adherens junctions.","definition_xrefs":["PMID:16102958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell-cell junction","synonyms":[{"name":"disruption of host cell-cell junction","type":"broad"},{"name":"modification by symbiont of host cell-cell junction","type":"exact"},{"name":"modification by symbiont of host intercellular junctions","type":"exact"},{"name":"modification of host cell-cell junction","type":"related"},{"name":"modification of host intercellular junctions by symbiont","type":"exact"},{"name":"symbiont-mediated disruption of host cell-cell junction","type":"related"}],"termid":"GO:0044067"}


id: PBO:0076211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 21","termid":"PBO:0076211"}


id: PBO:0090619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, xap-5-like protein","termid":"PBO:0090619"}


id: PBO:0017037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR93","termid":"PBO:0017037"}


id: GO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"},{"relation_name":"part_of","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"platelet aggregation","synonyms":[{"name":"blood platelet aggregation","type":"exact"},{"name":"thrombocyte aggregation","type":"related"}],"termid":"GO:0070527"}


id: PR:O94303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his4 gene.","definition_xrefs":["UniProtKB:O94303","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazole glycerol phosphate synthase hisHF (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC418.01c","synonyms":[{"name":"IGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IGPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ImGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his4","type":"exact"}],"termid":"PR:O94303"}


id: PBO:0046740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXO5 divergent transcript","termid":"PBO:0046740"}


id: GO:0019064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with the host cell membrane during viral entry. Results in release of the virion contents into the cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fusion involved in viral entry into host cell","termid":"GO:0039663"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of virus membrane with host plasma membrane","secondary_identifiers":["VZ:987","GO:0075706"],"synonyms":[{"name":"viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"viral envelope fusion","type":"broad"},{"name":"viral envelope fusion with host cell membrane","type":"exact"},{"name":"viral envelope fusion with host membrane","type":"exact"},{"name":"viral envelope fusion with host plasma membrane","type":"exact"},{"name":"viral penetration via membrane fusion","type":"broad"},{"name":"viral-cell fusion molecule activity","type":"related"}],"termid":"GO:0019064"}


id: GO:0090441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose biosynthetic process","termid":"GO:0005992"},{"relation_name":"is_a","term_name":"trehalose metabolism in response to heat stress","termid":"GO:0070414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose biosynthesis in response to heat stress","synonyms":[{"name":"trehalose biosynthetic process in response to heat stress","type":"exact"}],"termid":"GO:0090441"}


id: PBO:0030247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_freezing","termid":"PBO:0030247"}


id: PBO:0087505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of G protein involved in pheromone response; GTP-binding alpha subunit of heterotrimeric G protein; negatively regulates mating pathway by sequestering G(beta)gamma and triggering an adaptive response; activates Vps34p at endosome; protein abundance increases in response to DNA replication stress; mutations in human homolog GNAS associated with McCune-Albright syndrome","termid":"PBO:0087505"}


id: GO:0047257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol + UDP-D-glucose = UDP + 1,2-diacyl-3-O-(alpha-D-glucopyranosyl(1,2)-O-alpha-D-glucopyranosyl)-sn-glycerol.","definition_xrefs":["MetaCyc:2.4.1.208-RXN","EC:2.4.1.208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"diglucosyl diacylglycerol synthase activity","secondary_identifiers":["RHEA:19165"],"synonyms":[{"name":"DGlcDAG synthase activity","type":"related"},{"name":"MGlcDAG (1->2) glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol (1->2) glucosyltransferase activity","type":"related"},{"name":"diglucosyl diacylglycerol (DGlcDAG) synthase activity","type":"exact"},{"name":"monoglucosyl diacylglycerol (1->2) glucosyltransferase activity","type":"related"}],"termid":"GO:0047257"}


id: PBO:0052867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-10","termid":"PBO:0052867"}


id: PBO:0065193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 4B","termid":"PBO:0065193"}


id: FYPO:0002009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is lower than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased oxygen consumption during vegetative growth","synonyms":[{"name":"decreased oxygen consumption during mitotic cell cycle","type":"related"},{"name":"decreased oxygen uptake during vegetative growth","type":"related"},{"name":"reduced oxygen consumption during vegetative growth","type":"exact"}],"termid":"FYPO:0002009"}


id: GO:0016475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the size of the nucleus with respect to its cytoplasm is sensed by a cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of endogenous stimulus","termid":"GO:0009726"},{"relation_name":"part_of","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nuclear:cytoplasmic ratio","synonyms":[{"name":"interpretation of nuclear:cytoplasmic ratio","type":"exact"},{"name":"sensing of nuclear:cytoplasmic ratio","type":"exact"}],"termid":"GO:0016475"}


id: GO:0039593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with the host cell completing the M phase of the cell cycle.","definition_xrefs":["VZ:877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host exit from mitosis","synonyms":[{"name":"inhibition of host mitotic exit by virus","type":"exact"},{"name":"perturbation by virus of host exit from mitosis","type":"narrow"},{"name":"suppression by virus of host exit from mitosis","type":"related"}],"termid":"GO:0039593"}


id: PBO:0073328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 4","termid":"PBO:0073328"}


id: FYPO:0005992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to P-bodies is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to P-bodies","synonyms":[{"name":"decreased protein localisation to P-bodies","type":"exact"},{"name":"decreased protein localization to P-bodies during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to P-bodies during vegetative growth","type":"exact"},{"name":"decreased protein localization to P-body","type":"exact"},{"name":"decreased protein localization to cytoplasmic P-bodies","type":"exact"},{"name":"reduced protein localization to P-bodies","type":"exact"}],"termid":"FYPO:0005992"}


id: PBO:0027472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cyclosporin_A_binding","termid":"PBO:0027472"}


id: PR:Q9C0Y6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH-dependent curcumin reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01239","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein PB24D3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.08c","secondary_identifiers":["UniProtKB:Q9C0Y6"],"synonyms":[{"name":"Spom972h-curA","type":"exact"}],"termid":"PR:Q9C0Y6"}


id: GO:0071970
data:
  {"annotated_genes":["SJAG_04771","SJAG_04483","SJAG_01288","SJAG_00876","SJAG_00218","SJAG_01290","SJAG_05285","SJAG_04666","SJAG_03587","SJAG_02222","SJAG_01835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84190,87655,87665,102138,103823,105350,109208,111858],"is_not":false,"summary":null,"term":"GO:0071970"},{"annotations":[90535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[83635,88489],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in fungal cell walls.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0034411"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0071969"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan formation","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan formation","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0071970","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0063693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein geranylgeranyltransferase type I subunit beta","termid":"PBO:0063693"}


id: FYPO:0002091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis I or meiosis II, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"lagging chromosomes","termid":"FYPO:0002090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"lagging meiotic chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging meiotic chromosomes","type":"exact"},{"name":"lagging chromosomes during meiosis","type":"exact"},{"name":"meiotic chromosome segregation defects, lagging chromosomes","type":"exact"}],"termid":"FYPO:0002091"}


id: PBO:0087022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant","termid":"PBO:0087022"}


id: GO:0006893
data:
  {"annotated_genes":["SJAG_03938","SJAG_01114","SJAG_00916","SJAG_04044","SJAG_01335","SJAG_02240","SJAG_03754","SJAG_04609","SJAG_03357","SJAG_01516","SJAG_00858","SJAG_00826","SJAG_03864","SJAG_03838","SJAG_03970","SJAG_02166","SJAG_00330","SJAG_00144","SJAG_02231","SJAG_00430","SJAG_02320","SJAG_04358","SJAG_02753"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84741,86840,88343,95602,95812,95960,96899,102327,103430,109914,111680,113739,114835],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[94776,104840,87247,102446,103085,105631,109050,91220,103189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84209],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00430":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01335":null,"SJAG_01516":null,"SJAG_02166":null,"SJAG_02231":null,"SJAG_02240":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03357":null,"SJAG_03754":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Golgi to plasma membrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi to plasma membrane vesicle-mediated transport","type":"exact"}],"termid":"GO:0006893","terms_by_termid":{"GO:0006893":null,"GO:0042997":null,"GO:0043001":null}}


id: PBO:0038290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sgd_identifier","termid":"PBO:0038290"}


id: PBO:0081828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 761","termid":"PBO:0081828"}


id: PBO:0074051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 31","termid":"PBO:0074051"}


id: FYPO:0005814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends of microtubules does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to microtubule plus-end","synonyms":[{"name":"abolished protein localisation to microtubule plus-end","type":"exact"},{"name":"abolished protein localization to microtubule plus end","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule plus-end during vegetative growth","type":"exact"},{"name":"protein localization to microtubule plus-end abolished","type":"exact"}],"termid":"FYPO:0005814"}


id: PBO:0065904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab acceptor 1","termid":"PBO:0065904"}


id: FYPO:0006441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"increased protein kinase activity during cellular response to HU","type":"exact"}],"termid":"FYPO:0006441"}


id: GO:0051283
data:
  {"annotated_genes":["SJAG_03850","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"negatively_regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sequestering of calcium ion","type":"exact"},{"name":"down-regulation of sequestering of calcium ion","type":"exact"},{"name":"downregulation of sequestering of calcium ion","type":"exact"},{"name":"inhibition of sequestering of calcium ion","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"negative regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051283","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: PBO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_kinase_activity","termid":"PBO:0030853"}


id: PBO:0091176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein","termid":"PBO:0091176"}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["EC:2.4.1.219","RHEA:19385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05882","MetaCyc:2.4.1.219-RXN"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: PBO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl-tRNA hydrolase (predicted)","termid":"PBO:0001559"}


id: PBO:0058555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6134","termid":"PBO:0058555"}


id: GO:1990590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF1 and ATF4 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') of the GRP78 (HSPA5) promoter. Involved in the ER stress response pathway.","definition_xrefs":["GOC:bhm","PMID:12871976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"ATF1-ATF4 transcription factor complex","termid":"GO:1990590"}


id: PBO:0111931
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3/PP2B/calcineurin subfamily","termid":"PBO:0111931"}


id: GO:0048617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic foregut morphogenesis","termid":"GO:0048617"}


id: GO:0170041
data:
  {"annotated_genes":["SJAG_04546","SJAG_03434","SJAG_01592","SJAG_00635","SJAG_04827","SJAG_01019","SJAG_04577","SJAG_00043","SJAG_02496","SJAG_02972","SJAG_00832","SJAG_04042","SJAG_03671","SJAG_03102","SJAG_01461","SJAG_04459","SJAG_02290","SJAG_03288","SJAG_00636","SJAG_00964","SJAG_03398","SJAG_00412","SJAG_04988","SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98672,114391,94238,99504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[109248,93421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[106511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000053"},{"annotations":[94239,89483,102555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"},{"annotations":[110785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046436"},{"annotations":[110786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[110787,83526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046416"},{"annotations":[83717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[110788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902114"},{"annotations":[87774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009448"},{"annotations":[86124,98782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050667"},{"annotations":[106551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[60968,95439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097052"},{"annotations":[96720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[99686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[98674,94230,107949,114393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"},{"annotations":[107212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006591"},{"annotations":[85004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving non-proteingenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_00832":null,"SJAG_00964":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_02290":null,"SJAG_02496":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03288":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_04042":null,"SJAG_04459":null,"SJAG_04546":null,"SJAG_04577":null,"SJAG_04827":null,"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"non-proteinogenic amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"non-proteinogenic amino acid metabolism","type":"exact"}],"termid":"GO:0170041","terms_by_termid":{"GO:0000053":null,"GO:0006591":null,"GO:0006592":null,"GO:0009448":null,"GO:0019240":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019478":null,"GO:0019547":null,"GO:0033387":null,"GO:0036088":null,"GO:0042450":null,"GO:0046416":null,"GO:0046436":null,"GO:0050667":null,"GO:0052707":null,"GO:0071269":null,"GO:0097052":null,"GO:1902114":null}}


id: GO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a cilium.","definition_xrefs":["GOC:cilia","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of cilium assembly","synonyms":[{"name":"activation of cilium assembly","type":"narrow"},{"name":"positive regulation of flagellum assembly","type":"broad"},{"name":"positive regulation of flagellum biogenesis","type":"related"},{"name":"stimulation of cilium assembly","type":"narrow"},{"name":"up regulation of cilium assembly","type":"exact"},{"name":"up-regulation of cilium assembly","type":"exact"},{"name":"upregulation of cilium assembly","type":"exact"}],"termid":"GO:0045724"}


id: PBO:0091756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2049892delT","termid":"PBO:0091756"}


id: PBO:0068748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 3, pseudogene","termid":"PBO:0068748"}


id: PBO:0075794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 12","termid":"PBO:0075794"}


id: PBO:0045718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 2","termid":"PBO:0045718"}


id: PBO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization","termid":"PBO:0030724"}


id: PBO:0041408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 141","termid":"PBO:0041408"}


id: GO:0060392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the SMAD protein signaling pathway.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SMAD protein signal transduction","termid":"GO:0060390"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of SMAD protein signal transduction","synonyms":[{"name":"negative regulation of SMAD protein import into nucleus","type":"narrow"},{"name":"negative regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060392"}


id: PBO:0064541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 2","termid":"PBO:0064541"}


id: FYPO:0001746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biotin import","termid":"FYPO:0001744"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished biotin import","synonyms":[{"name":"abolished biotin import across plasma membrane","type":"exact"},{"name":"abolished biotin import during mitotic cell cycle","type":"related"},{"name":"abolished biotin import during vegetative growth","type":"exact"},{"name":"abolished biotin import into cell","type":"exact"},{"name":"abolished biotin uptake","type":"exact"},{"name":"absent biotin import","type":"exact"},{"name":"biotin import abolished","type":"exact"}],"termid":"FYPO:0001746"}


id: PBO:0080242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 5 (gene/pseudogene)","termid":"PBO:0080242"}


id: PBO:0080135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valyl-tRNA synthetase 1","termid":"PBO:0080135"}


id: GO:0015801
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[62768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of aromatic amino acids, amino acids with aromatic ring, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"aromatic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015801","terms_by_termid":{"GO:0015828":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null}}


id: GO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add","PMID:15032583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell proliferation","termid":"GO:0001787"},{"relation_name":"is_a","term_name":"natural killer cell activation involved in immune response","termid":"GO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation involved in immune response","synonyms":[{"name":"NK cell proliferation during immune response","type":"related"},{"name":"natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0002324"}


id: GO:0035509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphoprotein phosphatase activity","termid":"GO:0032515"},{"relation_name":"is_a","term_name":"regulation of myosin-light-chain-phosphatase activity","termid":"GO:0035507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myosin-light-chain-phosphatase activity","termid":"GO:0035509"}


id: GO:0010872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cholesterol esterification. Cholesterol esterification is the lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and cholesterol. In the blood this process is associated with the conversion of free cholesterol into cholesteryl ester, which is then sequestered into the core of a lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cholesterol esterification (obsolete GO:0010872)","termid":"GO:0010872"}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: GO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The host cell cytoplasm situated near, or occurring around, the host nucleus.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell perinuclear region of cytoplasm","termid":"GO:0044220"}


id: PATO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000704 pain threshold value (obsolete PATO:0000704)","termid":"PATO:0000704"}


id: PBO:0087740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential","termid":"PBO:0087740"}


id: PBO:0053105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 4","termid":"PBO:0053105"}


id: PBO:0046181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 2","termid":"PBO:0046181"}


id: PBO:0064116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 3","termid":"PBO:0064116"}


id: PR:O94447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm1 gene.","definition_xrefs":["UniProtKB:O94447","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein slm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.13c","synonyms":[{"name":"Spom972h-slm1","type":"exact"}],"termid":"PR:O94447"}


id: GO:0097716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper (Cu) ions passing through the blood-brain barrier.","definition_xrefs":["GOC:sl","PMID:24614235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"copper ion transport across blood-brain barrier","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:0097716"}


id: GO:0009987
data:
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