# terms

id: PBO:0079225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3 pseudogene 1","termid":"PBO:0079225"}


id: PBO:0027037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_lipid_metabolism_gene_mRNA_during_vegetative_growth","termid":"PBO:0027037"}


id: GO:0035944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a perforin protein due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"perforin production","termid":"GO:0035944"}


id: GO:0061125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}


id: FYPO:0004756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the initiation of DNA-dependent DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004756"}


id: GO:1904241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"positively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904241"}


id: PBO:0025518
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana cak1At","termid":"PBO:0025518"}


id: PBO:0085765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; interacts with rRNA transcription and ribosome biogenesis factors and the long chain fatty acyl-CoA synthetase Faa3p; FRK1 has a paralog, KIN4, that arose from the whole genome duplication","termid":"PBO:0085765"}


id: PBO:0084602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR391W was originally annotated as an independent ORF, but was completely contained in larger ORF YLR391W-A in the same frame, and was merged into it on 7-30-1997","termid":"PBO:0084602"}


id: GO:0141024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a carbohydrate on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19527885","PMID:30736336","PMID:15210807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane carbohydrate","termid":"GO:0141024"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: SO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a polypeptide, involved in the transition from one conformational state to another.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"conformational_switch","synonyms":[{"name":"polypeptide conformational switch","type":"exact"}],"termid":"SO:0001422"}


id: PATO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to an ealier offset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progenetic growth","termid":"PATO:0001751"}


id: PR:O13947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial tRNA-specific 2-thiouridylase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11933:SF0","OMA:SCHPO00647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.04","secondary_identifiers":["UniProtKB:O13947"],"synonyms":[{"name":"Spom972h-TRMU","type":"exact"}],"termid":"PR:O13947"}


id: PBO:0075778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 4","termid":"PBO:0075778"}


id: GO:0120074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation, the process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cushion cell.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"}


id: PR:O74975
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcy1 gene.","definition_xrefs":["UniProtKB:O74975","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.02c","synonyms":[{"name":"CCT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTP:phosphocholine cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pcy1","type":"exact"},{"name":"phosphorylcholine transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74975"}


id: PBO:0051612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 beta","termid":"PBO:0051612"}


id: PBO:0076170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 2","termid":"PBO:0076170"}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["EC:2.8.2.9","RHEA:19977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R04213","GO:0008128","MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: GO:0048882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line over time, from its formation to the mature structure. The lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The lateral line develops from cranial ectodermal placodes situated behind the ear and between the eye and ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line development","synonyms":[{"name":"LL development","type":"exact"}],"termid":"GO:0048882"}


id: GO:1901498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetralin stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tetralin","termid":"GO:1901498"}


id: GO:0015983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of solute translocation in which two solutes equilibrate across an osmotic barrier, and the translocation of one solute is coupled to the translocation of the other in the same direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete symport (obsolete GO:0015983)","synonyms":[{"name":"symport","type":"exact"}],"termid":"GO:0015983"}


id: GO:0009729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a brassinosteroid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to brassinosteroid","termid":"GO:0009741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of brassinosteroid stimulus","synonyms":[{"name":"perception of brassinosteroid stimulus","type":"related"}],"termid":"GO:0009729"}


id: GO:0032017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Ran protein signal transduction (obsolete GO:0032017)","synonyms":[{"name":"activation of Ran protein signal transduction","type":"narrow"},{"name":"stimulation of Ran protein signal transduction","type":"narrow"},{"name":"up regulation of Ran protein signal transduction","type":"exact"},{"name":"up-regulation of Ran protein signal transduction","type":"exact"},{"name":"upregulation of Ran protein signal transduction","type":"exact"}],"termid":"GO:0032017"}


id: PATO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt","definition_xrefs":["wiktionary:superellipse"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superelliptic","synonyms":[{"name":"Lamé curve","type":"exact"}],"termid":"PATO:0002318"}


id: PBO:0049257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G0/G1 switch 2","termid":"PBO:0049257"}


id: GO:1902079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-valine.","definition_xrefs":["GOC:TermGenie","PMID:23085840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine catabolic process","termid":"GO:0006574"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-valine metabolic process","termid":"GO:1902114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"D-valine catabolic process","synonyms":[{"name":"D-valine breakdown","type":"exact"},{"name":"D-valine catabolism","type":"exact"},{"name":"D-valine degradation","type":"exact"}],"termid":"GO:1902079"}


id: PBO:0047048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member C","termid":"PBO:0047048"}


id: PBO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.11","termid":"PBO:0002399"}


id: GO:0098997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with the host cell outer membrane during viral entry.","definition_xrefs":["GOC:dos","VZ:3941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of virus membrane with host outer membrane","synonyms":[{"name":"fusion of viral membrane with host outer membrane","type":"related"},{"name":"viral envelope fusion","type":"broad"},{"name":"viral envelope fusion with host outer membrane","type":"exact"},{"name":"viral penetration via membrane fusion","type":"broad"},{"name":"viral-cell fusion molecule activity","type":"related"}],"termid":"GO:0098997"}


id: PBO:0077785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II alpha","termid":"PBO:0077785"}


id: GO:1904748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22801495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"apoptotic process involved in development","termid":"GO:1902742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in development","synonyms":[{"name":"regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1904748"}


id: FYPO:0006737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of alpha-hibitakanine. Normally, wild-type cell populations survive longer in the presence of alpha-hibitakanine than in its absence.","definition_xrefs":["PomBase:mah","PMID:29900664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by alpha-hibitakanine","synonyms":[{"name":"chronological lifespan unaffected by alpha-hibitakanine","type":"related"},{"name":"loss of chronological lifespan extension by alpha-hibitakanine","type":"related"},{"name":"loss of stationary phase viability extension in presence of alpha-hibitakanine","type":"exact"}],"termid":"FYPO:0006737"}


id: GO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.","definition_xrefs":["GOC:cilia","PMID:14570576","PMID:23945166","PMID:22118932","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intraciliary transport particle","synonyms":[{"name":"IFT complex","type":"related"},{"name":"intraflagellar transport complex","type":"exact"},{"name":"intraflagellar transport particle","type":"exact"}],"termid":"GO:0030990"}


id: PBO:0044859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 2","termid":"PBO:0044859"}


id: PBO:0035698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytokinesis_checkpoint","termid":"PBO:0035698"}


id: PBO:0049078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 119","termid":"PBO:0049078"}


id: PBO:0052201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 1","termid":"PBO:0052201"}


id: PBO:0002689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arp2","termid":"PBO:0002689"}


id: GO:0102838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.23","MetaCyc:RXN-8298"],"termid":"GO:0102838"}


id: GO:0048322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an axial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"axial mesodermal cell differentiation","termid":"GO:0048321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate commitment","synonyms":[{"name":"axial mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0048322"}


id: GO:0075221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore encystment on host","termid":"GO:0075217"},{"relation_name":"is_a","term_name":"modulation of zoospore encystment on host","termid":"GO:0075219"},{"relation_name":"negatively_regulates","term_name":"zoospore encystment on host","termid":"GO:0075218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of zoospore encystment on host","termid":"GO:0075221"}


id: PBO:0068257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 4","termid":"PBO:0068257"}


id: PBO:0014312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0014312"}


id: PBO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 4","termid":"PBO:0060016"}


id: GO:0010332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ionizing radiation","termid":"GO:0010212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gamma radiation","synonyms":[{"name":"response to gamma ray","type":"related"},{"name":"response to gamma-ray photon","type":"related"}],"termid":"GO:0010332"}


id: PBO:0016102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf2 (predicted)","termid":"PBO:0016102"}


id: PBO:0041951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 2","termid":"PBO:0041951"}


id: PBO:0070072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 29, pseudogene","termid":"PBO:0070072"}


id: PBO:0083482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TDP1","termid":"PBO:0083482"}


id: PBO:0026893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026893"}


id: PBO:0049534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 5","termid":"PBO:0049534"}


id: SO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence feature that corresponds to a single amino acid residue in a polypeptide.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"polypeptide","termid":"SO:0000104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Amino_acid"],"synonyms":[{"name":"amino acid","type":"exact"}],"termid":"SO:0001237"}


id: SO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded DNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_sequence_secondary_structure","synonyms":[{"name":"DNA sequence secondary structure","type":"exact"}],"termid":"SO:0000142"}


id: GO:0071915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of lysine group to a lysine residue in a protein, producing N6-(lysyl)-L-lysine. This modification is observed in, and is probably unique to, translation elongation factor P (EF-P).","definition_xrefs":["GOC:jsg","PMID:20729861","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"part_of","term_name":"bacterial-type EF-P lysine modification","termid":"GO:0072580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-lysine lysylation","synonyms":[{"name":"protein amino acid lysylation","type":"exact"}],"termid":"GO:0071915"}


id: MOD:00826
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and an L-cysteine residue by a thioester bond to form S-(L-threonyl)-L-cysteine.","definition_xrefs":["RESID:AA0415","PubMed:15268951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-threonyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S,3R)-2-amino-3-hydroxybutanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Threonyl cysteine thioester (Cys-Thr)","type":"exact"},{"name":"S-(2-amino-3-hydroxybutanoyl)cysteine","type":"exact"},{"name":"S-(L-threonyl)-L-cysteine","type":"exact"},{"name":"XLNK1ThrSCys","type":"exact"},{"name":"threonine cysteine thioester","type":"exact"}],"termid":"MOD:00826"}


id: GO:1900070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["GOC:TermGenie","PMID:16278455","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular hyperosmotic salinity response","termid":"GO:1900069"},{"relation_name":"is_a","term_name":"negative regulation of response to salt stress","termid":"GO:1901001"},{"relation_name":"negatively_regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"down regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"down-regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down-regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"downregulation of cellular hyperosmotic salinity response","type":"related"},{"name":"downregulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"inhibition of cellular hyperosmotic salinity response","type":"narrow"},{"name":"inhibition of cellular response to hyperosmotic salt stress","type":"narrow"},{"name":"negative regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900070"}


id: PBO:0033758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_gamma-tubulin_complex_localization_to_single_mitotic_spindle_pole_body","termid":"PBO:0033758"}


id: PBO:0028377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_xanthine_DNA_N-glycosylase_activity","termid":"PBO:0028377"}


id: PATO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's delimited by a surface with holes.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fenestrated","termid":"PATO:0002064"}


id: FYPO:0006556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is elongated, has four nuclei and three septa, and the septa are not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei","termid":"FYPO:0001253"},{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"inviable elongated tetranucleate triseptate vegetative cell, single septa between nuclei","synonyms":[{"name":"inviable elongated multiseptate vegetative cell, with four nuclei and single septa between nuclei","type":"exact"},{"name":"inviable elongated tetranucleate triseptate cell, single septa between nuclei during vegetative growth","type":"exact"},{"name":"inviable elongated tetranucleate triseptate vegetative cell, single septa between nuclei during mitotic cell cycle","type":"related"},{"name":"lethal; elongated tetranucleate triseptate vegetative cell, single septa between nuclei","type":"exact"}],"termid":"FYPO:0006556"}


id: GO:1904130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in neural plate elongation.","definition_xrefs":["PMID:24892953","GOC:dph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in neural plate elongation","termid":"GO:1904130"}


id: PBO:0049137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 1","termid":"PBO:0049137"}


id: GO:0010593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellipodium assembly","termid":"GO:0010591"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"negative regulation of lamellipodium organization","termid":"GO:1902744"},{"relation_name":"negatively_regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellipodium assembly","synonyms":[{"name":"negative regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010593"}


id: PBO:0059621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 2","termid":"PBO:0059621"}


id: PR:O74480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1840.07c gene.","definition_xrefs":["UniProtKB:O74480","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.07c","synonyms":[{"name":"Spom972h-SPCC1840.07c","type":"exact"}],"termid":"PR:O74480"}


id: GO:0008457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide = UDP + N-acetyl-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide.","definition_xrefs":["MetaCyc:2.4.1.163-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity (obsolete GO:0008457)","synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,3-acetylglucosaminyltransferase activity","type":"exact"},{"name":"poly-N-acetyllactosamine extension enzyme activity","type":"broad"}],"termid":"GO:0008457"}


id: GO:0008061
data:
  {"annotated_genes":["SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66280,87840],"is_not":false,"summary":null,"term":"GO:0008061"}]},"cv_name":"molecular_function","definition":"Binding to chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chitin binding","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0008061","terms_by_termid":{"GO:0008061":null}}


id: GO:0042262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which DNA is protected from damage by, for example, oxidative stress.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA protection","termid":"GO:0042262"}


id: PBO:0044621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermcidin","termid":"PBO:0044621"}


id: GO:0032147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive protein kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase activity","synonyms":[{"name":"protein kinase activation","type":"related"}],"termid":"GO:0032147"}


id: PR:P0CT68
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2001 gene.","definition_xrefs":["UniProtKB:P0CT68","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.10","synonyms":[{"name":"Spom972h-rpl2001","type":"exact"},{"name":"YL17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT68"}


id: PBO:0062704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily F member 3 pseudogene","termid":"PBO:0062704"}


id: PBO:0041058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9","termid":"PBO:0041058"}


id: GO:0048672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting","synonyms":[{"name":"activation of collateral sprouting","type":"narrow"},{"name":"stimulation of collateral sprouting","type":"narrow"},{"name":"up regulation of collateral sprouting","type":"exact"},{"name":"up-regulation of collateral sprouting","type":"exact"},{"name":"upregulation of collateral sprouting","type":"exact"}],"termid":"GO:0048672"}


id: FYPO:0006760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromeres do not detach properly from the spindle pole body (SPB) during the meiotic cell cycle. Normally, centromeres are located at the SPB during mitotic interphase, and upon entering meiosis, telomeres cluster at the SPB, followed by centromere detachment from the SPB.","definition_xrefs":["PomBase:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal centromere detachment from spindle pole body during meiotic chromosome organization","synonyms":[{"name":"abnormal centromere detachment from SPB during meiotic chromosome organization","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body during meiotic chromosome organisation","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body involved in meiotic chromosome organization","type":"exact"},{"name":"defective centromere detachment from the SPB during karyogamy and meiotic prophase","type":"exact"}],"termid":"FYPO:0006760"}


id: PBO:0081775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705C, pseudogene","termid":"PBO:0081775"}


id: FYPO:0005454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere assembly, i.e. the aggregation, arrangement and bonding together of a set of components to form a telomere at a double-stranded DNA end, is abnormal.","definition_xrefs":["GO:0032202","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere assembly","synonyms":[{"name":"abnormal telomere assembly during mitotic cell cycle","type":"related"},{"name":"abnormal telomere assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005454"}


id: GO:0071281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron ion","synonyms":[{"name":"cellular response to iron","type":"exact"}],"termid":"GO:0071281"}


id: GO:0033569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactoferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140318","GO:0022857"],"is_obsolete":false,"name":"lactoferrin transmembrane transporter activity","termid":"GO:0033569"}


id: GO:0021557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["ISBN:0838580343","GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve development","synonyms":[{"name":"CN III development","type":"related"},{"name":"cranial nerve 3 development","type":"exact"},{"name":"cranial nerve III development","type":"exact"}],"termid":"GO:0021557"}


id: PBO:0044407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily E member 1","termid":"PBO:0044407"}


id: PR:P0CT81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L41-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.13c","synonyms":[{"name":"Spom972h-rpl4101","type":"exact"}],"termid":"PR:P0CT81"}


id: PBO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAT repeat protein","termid":"PBO:0000923"}


id: PBO:0061680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 98 and 96 precursor","termid":"PBO:0061680"}


id: PBO:0068900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 142, pseudogene","termid":"PBO:0068900"}


id: GO:0018970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications.","definition_xrefs":["UM-BBD_pathwayID:tol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene metabolic process","synonyms":[{"name":"methylbenzene metabolic process","type":"exact"},{"name":"methylbenzene metabolism","type":"exact"},{"name":"toluene metabolism","type":"exact"}],"termid":"GO:0018970"}


id: PBO:0085344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase; preferentially hydrolyses phosphatidylserine, with minor activity against cardiolipin and phosphatidylethanolamine; required for lysis of autophagic and CVT bodies; targeted to intravacuolar vesicles during autophagy via the multivesicular body (MVB) pathway; required for the maintenance of lipid droplet quantity after the diauxic shift; regulates lipolysis; expression regulated by Yap1p during autophagy","termid":"PBO:0085344"}


id: GO:0140653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of the indole alkaloid fumitremorgin C.","definition_xrefs":["PMID:19226505","GOC:ach"],"gene_count":0,"genotype_count":0,"name":"obsolete fumitremorgin C biosynthetic process (obsolete GO:0140653)","synonyms":[{"name":"fumitremorgin C anabolism","type":"exact"},{"name":"fumitremorgin C biosynthesis","type":"exact"},{"name":"fumitremorgin C formation","type":"exact"},{"name":"fumitremorgin C synthesis","type":"exact"}],"termid":"GO:0140653"}


id: GO:0090560
data:
  {"annotated_genes":["SJAG_04085","SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101281,105756],"is_not":false,"summary":null,"term":"GO:0090560"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction S-adenosyl-L-methionine + L-histidine-[translation elongation factor 2] = S-methyl-5-thioadenosine + 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2].","definition_xrefs":["GOC:pde","PMID:15485916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"2-(3-amino-3-carboxypropyl)histidine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5358494","RHEA:36783","EC:2.5.1.108","MetaCyc:RXN-11371"],"termid":"GO:0090560","terms_by_termid":{"GO:0090560":null}}


id: PBO:0017421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contained_in","termid":"PBO:0017421"}


id: GO:0072757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to camptothecin","termid":"GO:1901563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to camptothecin","synonyms":[{"name":"cellular response to CPT","type":"exact"}],"termid":"GO:0072757"}


id: PBO:0001625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk15 (predicted)","termid":"PBO:0001625"}


id: GO:0043894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the acetylation of residue Lys609 of the enzyme acetyl-CoA synthetase, using acetyl-CoA as substrate.","definition_xrefs":["PMID:15236963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"acetyl-CoA synthetase acetyltransferase activity","synonyms":[{"name":"Pat","type":"related"},{"name":"Pat enzyme","type":"exact"},{"name":"protein acetyltransferase activity","type":"broad"}],"termid":"GO:0043894"}


id: PBO:0049024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 3","termid":"PBO:0049024"}


id: PBO:0084541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; role in misfolded protein quality control; forms a heterotrimeric complex with Erp1p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP2 has a paralog, ERP4, that arose from the whole genome duplication","termid":"PBO:0084541"}


id: PR:000050485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, PR:000026291.","definition_xrefs":["PMID:33131769","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/UnPhos(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, PR:000026291","type":"narrow"},{"name":"rng2/UnPhos(S199,S207)","type":"exact"}],"termid":"PR:000050485"}


id: PBO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 39 subfamily A member 1","termid":"PBO:0044488"}


id: GO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process occurring in the host cell that contributes to the process of posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host cellular process involved in virus induced gene silencing (obsolete GO:0060144)","termid":"GO:0060144"}


id: FYPO:0006035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:14767070","PomBase:mah","GO:0051881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial membrane potential","synonyms":[{"name":"normal mitochondrial membrane polarization","type":"exact"},{"name":"normal mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006035"}


id: GO:0046276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylgallate metabolic process","termid":"GO:0019489"},{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"methylgallate catabolic process","secondary_identifiers":["MetaCyc:METHYLGALLATE-DEGRADATION-PWY"],"synonyms":[{"name":"methylgallate breakdown","type":"exact"},{"name":"methylgallate catabolism","type":"exact"},{"name":"methylgallate degradation","type":"exact"}],"termid":"GO:0046276"}


id: PBO:0082372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication","termid":"PBO:0082372"}


id: PBO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTLH domain","termid":"PBO:0003170"}


id: PBO:0002797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GAp family","termid":"PBO:0002797"}


id: GO:0102219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n ATP + n H2O + a 6-phosphogluco-amylopectin = n AMP + n hydrogenphosphate + a 6-phosphogluco-3-phosphogluco-amylopectin.","definition_xrefs":["GOC:pz","EC:2.7.9.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoglucan, water dikinase activity","termid":"GO:0051752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphogluco-amylopectin water dikinase activity","secondary_identifiers":["MetaCyc:RXN-12204"],"termid":"GO:0102219"}


id: SO:0002280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Members of the Mutator family of terminal inverted repeat (TIR) transposon are usually long but are also highly divergent, either sharing only terminal G…C nucleotides, or with the G…C nucleotides absent. The length of the TSD (7-11 bp, usually 9 bp) remains probably the most useful criterion for identification.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mutator_TIR_transposon","synonyms":[{"name":"DTM transposon","type":"exact"},{"name":"MLE transposon","type":"exact"},{"name":"MULE","type":"exact"},{"name":"Mu transposon","type":"exact"},{"name":"MuDR","type":"exact"},{"name":"Mutator TIR transposon","type":"exact"},{"name":"Mutator transposon","type":"exact"}],"termid":"SO:0002280"}


id: PBO:0075242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 12","termid":"PBO:0075242"}


id: PBO:0052247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 16","termid":"PBO:0052247"}


id: PBO:0087573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH complex; involved in transcription initiation, similar to 34 kDa subunit of human TFIIH; interacts with Ssl1p","termid":"PBO:0087573"}


id: PBO:0016571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mEK 1","termid":"PBO:0016571"}


id: PBO:0056025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 3","termid":"PBO:0056025"}


id: PBO:0052289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratocan","termid":"PBO:0052289"}


id: GO:0097720
data:
  {"annotated_genes":["SJAG_03879","SJAG_02858","SJAG_04668","SJAG_03631","SJAG_03793","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88469,94180,109402,114578],"is_not":false,"summary":null,"term":"GO:0097720"},{"annotations":[97045,112172],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a transcription factor as a consequence of dephosphorylation by Ca(2+)-activated calcineurin. The process begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin is a calcium- and calmodulin-dependent serine/threonine protein phosphatase with a conserved function in eukaryotic species from yeast to humans. In yeast and fungi, calcineurin regulates stress signaling and cell cycle, and sporulation and virulence in pathogenic fungi. In metazoans, calcineurin is involved in cell commitment, organogenesis and organ development and immune function of T-lymphocytes. By a conserved mechanism, calcineurin phosphatase activates fungal Crz1 and mammalian NFATc by dephosphorylation and translocation of these transcription factors to the nucleus to regulate gene expression.","definition_xrefs":["PMID:25878052","GOC:di","PMID:25655284","PMID:26851544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcineurin signaling","type":"related"},{"name":"calcineurin-mediated signalling","type":"exact"}],"termid":"GO:0097720","terms_by_termid":{"GO:0097720":null,"GO:0106057":null}}


id: PBO:0085837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress; YKR018C has a paralog, IML2, that arose from the whole genome duplication","termid":"PBO:0085837"}


id: PBO:0060659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 3","termid":"PBO:0060659"}


id: PBO:0083385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps dubious ORF YHR180C-B and long terminal repeat YHRCsigma3","termid":"PBO:0083385"}


id: PBO:0045609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 20 (pseudogene)","termid":"PBO:0045609"}


id: PBO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8 like 1","termid":"PBO:0044602"}


id: GO:0050932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pigmented cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigment cell differentiation","termid":"GO:0050932"}


id: PR:Q9HGP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29B5.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B5.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.04c","synonyms":[{"name":"Spom972h-SPBC29B5.04c","type":"exact"}],"termid":"PR:Q9HGP1"}


id: FYPO:0002015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to iron ion starvation","synonyms":[{"name":"decreased growth during cellular response to iron ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to iron ion starvation","type":"exact"},{"name":"hypersensitive to iron ion starvation","type":"exact"},{"name":"sensitive to iron ion depletion","type":"exact"},{"name":"sensitive to iron ion deprivation","type":"exact"},{"name":"sensitive to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to iron ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to iron starvation","type":"exact"}],"termid":"FYPO:0002015"}


id: GO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: PBO:0048397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 3","termid":"PBO:0048397"}


id: PBO:0051176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64D","termid":"PBO:0051176"}


id: PBO:0064313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 2","termid":"PBO:0064313"}


id: PBO:0082029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; involved with Gas4p in spore wall assembly; has similarity to Gas1p","termid":"PBO:0082029"}


id: PBO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO34 antisense RNA 1","termid":"PBO:0047395"}


id: PBO:0048855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A2","termid":"PBO:0048855"}


id: MOD:00294
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-histidine residues, an L-serine residue and a four-iron four-sulfur cluster to bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","type":"exact"},{"name":"tetra-mu3-sulfidobis(S-cysteinyliron)(N3'-histidinoiron)(O3-serinyliron)","type":"exact"}],"termid":"MOD:00294"}


id: PBO:0028993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proline_import","termid":"PBO:0028993"}


id: PBO:0051374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-5 (pseudogene)","termid":"PBO:0051374"}


id: PR:Q7LKY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1289.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LKY2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin-related protein C1289.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.14","synonyms":[{"name":"Spom972h-SPBC1289.14","type":"exact"}],"termid":"PR:Q7LKY2"}


id: PBO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4","termid":"PBO:0060501"}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: PATO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000298 not arrested value (obsolete PATO:0000298)","termid":"PATO:0000298"}


id: PBO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4 (predicted)","termid":"PBO:0003327"}


id: PBO:0083730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential alpha-kleisin subunit of the cohesin complex; required for sister chromatid cohesion in mitosis; subject to proteolytic cleavage by separase Esp1p, resulting in dissociation of cohesin from chromatin and the separation of sister chromatids at the mitotic metaphase-to-anaphase transition; apoptosis induces cleavage and translocation of a C-terminal fragment to mitochondria; expression peaks in S phase","termid":"PBO:0083730"}


id: GO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont salicylic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway (obsolete GO:0052481)","synonyms":[{"name":"negative modulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"negative modulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052481"}


id: PBO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin beta interacting protein 1","termid":"PBO:0044178"}


id: FYPO:0000159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome condensation is abnormal. Chromosome condensation is the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division.","definition_xrefs":["GO:0030261","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal chromosome condensation","secondary_identifiers":["FYPO:0000028"],"synonyms":[{"name":"chromosome condensation defects","type":"exact"}],"termid":"FYPO:0000159"}


id: FYPO:0004486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein deacetylation during vegetative growth","synonyms":[{"name":"abolished protein deacetylation during mitotic cell cycle","type":"related"},{"name":"protein deacetylation abolished during vegetative growth","type":"exact"},{"name":"protein deacetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004486"}


id: GO:0031911
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stable, specialized structure for extrusion of waste by the cell into the surrounding medium.","definition_xrefs":["PMID:27889663","PMID:10503189","PMID:23317460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytoproct","termid":"GO:0031911"}


id: GO:0070656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new mechanoreceptors to replace those lost or destroyed by injury.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"}


id: PBO:0063590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 5 like","termid":"PBO:0063590"}


id: PBO:0075518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member A","termid":"PBO:0075518"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: PBO:0085590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in axial bud site selection; prevents repolarization of cells at previous division sites; recruited with Nba1p to the cell cortex and to cytokinesis remnants (bud scars) by Aim44p and Nap1p where Nba1p prevent Rsr1p-mediated activation of Cdc24p, and therefore Cdc42p activation; acts with Nba1p to establish transient bud scar localization of Rga1p, a Cdc42p GAP; localizes to the nucleus and to cell division site during G2/M, and is then stably recruited to cytokinesis remnants","termid":"PBO:0085590"}


id: SO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of transcription.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001679 transcription_regulatory_region (obsolete SO:0001679)","synonyms":[{"name":"transcription regulatory region","type":"exact"}],"termid":"SO:0001679"}


id: PBO:0087962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transport adaptor or symportin; assembly chaperone that co-translationally associates with nascent Rpl5p, preventing aggregation; facilitates synchronized nuclear coimport of two 5S-rRNA binding proteins, Rpl5p and Rpl11p, mediated by import receptor Kap104p; required for biogenesis of the large ribosomal subunit; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087962"}


id: GO:0160185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme phospholipase C.","definition_xrefs":["PMID:28130414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"phospholipase C activator activity","termid":"GO:0160185"}


id: GO:1905635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a FACT complex.","definition_xrefs":["PMID:20889714","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"FACT complex assembly","synonyms":[{"name":"FACT complex formation","type":"exact"},{"name":"Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905635"}


id: GO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An angiotensin receptor activity that acts via Gq-mediated activation of phospholipase C followed by phosphoinositide hydrolysis and Ca2+ signaling, and may act via additional signaling mechanisms.","definition_xrefs":["PMID:10977869","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor activity","termid":"GO:0001595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"angiotensin type I receptor activity","synonyms":[{"name":"PLC-activating angiotensin receptor activity","type":"exact"}],"termid":"GO:0001596"}


id: PBO:0066688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 3","termid":"PBO:0066688"}


id: FYPO:0000318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable, some cells may divide, and some cells are longer than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including long cells (obsolete FYPO:0000318)","synonyms":[{"name":"inviable microcolony including long cells","type":"exact"},{"name":"inviable mixed population including long vegetative cells","type":"exact"},{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0000318"}


id: MOD:01746
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01746"}


id: SO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chloroplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_sequence","termid":"SO:0000745"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_chromosome","synonyms":[{"name":"chloroplast chromosome","type":"exact"}],"termid":"SO:0000820"}


id: FYPO:0000548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein modification processes is longer than normal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein modification during vegetative growth","synonyms":[{"name":"protein/peptide modification: increased duration","type":"related"},{"name":"increased duration of protein modification during mitotic cell cycle","type":"related"},{"name":"increased duration of protein/peptide modification during vegetative growth","type":"exact"},{"name":"prolonged protein modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000548"}


id: PBO:0054238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1620","termid":"PBO:0054238"}


id: PBO:0108937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 16","termid":"PBO:0108937"}


id: PBO:0055678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase G, endothelial type","termid":"PBO:0055678"}


id: PR:O74546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.07","synonyms":[{"name":"Spom972h-omh3","type":"exact"}],"termid":"PR:O74546"}


id: PBO:0043924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 3","termid":"PBO:0043924"}


id: PBO:0060843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium chain","termid":"PBO:0060843"}


id: FYPO:0001788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cytoplasm","synonyms":[{"name":"normal protein localisation to cytoplasm","type":"exact"},{"name":"normal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0001788"}


id: PBO:0054951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2365","termid":"PBO:0054951"}


id: PBO:0003928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Rrb1 (predicted)","termid":"PBO:0003928"}


id: GO:0170053
data:
  {"annotated_genes":["SJAG_01076","SJAG_00686","SJAG_05212","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140656"},{"annotations":[100950,85800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[88372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a nuclease.","definition_xrefs":["PMID:24736845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01076":null,"SJAG_04682":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"nuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170053","terms_by_termid":{"GO:0044692":null,"GO:0061632":null,"GO:0140656":null}}


id: PBO:0063779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 6","termid":"PBO:0063779"}


id: GO:0071452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a singlet oxygen stimulus. Singlet oxygen is a dioxygen (O2) molecule in which two 2p electrons have similar spin. Singlet oxygen is more highly reactive than the form in which these electrons are of opposite spin, and it is produced in mutant chloroplasts lacking carotenoids and by leukocytes during metabolic burst.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to singlet oxygen","termid":"GO:0000304"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to singlet oxygen","termid":"GO:0071452"}


id: GO:0010640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010640"}


id: PBO:0084395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084395"}


id: PBO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumble family pantothenate kinase (predicted)","termid":"PBO:0004495"}


id: PBO:0036096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036096"}


id: PBO:0043089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 1","termid":"PBO:0043089"}


id: PR:O42991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.13c","synonyms":[{"name":"Spom972h-rpl1601","type":"exact"}],"termid":"PR:O42991"}


id: GO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["UM-BBD_enzymeID:e0462"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase activity (obsolete GO:0018635)","termid":"GO:0018635"}


id: SO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is moved.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_premature_start_codon_variant","termid":"SO:0001983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_UTR_premature_start_codon_location_variant","termid":"SO:0001990"}


id: GO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males.","definition_xrefs":["PMID:20622855","GOC:mr","Wikipedia:XY_sex-determination_system","ISBN:0582227089","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Y chromosome","secondary_identifiers":["Wikipedia:Y_chromosome"],"termid":"GO:0000806"}


id: PBO:0076078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereocilin pseudogene 1","termid":"PBO:0076078"}


id: GO:0005821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the spindle pole body.","definition_xrefs":["PMID:9215630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"intermediate layer of spindle pole body","termid":"GO:0005821"}


id: GO:0070940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a phosphate group from an amino acid residue in the C-terminal domain of RNA polymerase II. Some dephosphorylation occurs during transcription while some may occur after the enzyme is released from the template in order to prepare it for the beginning of the transcription cycle again. RNA polymerase II with little or no phosphorylation is referred to as the hypophosphorylated or II(A) form.","definition_xrefs":["GOC:mah","GOC:krc","PMID:17079683"],"gene_count":0,"genotype_count":0,"name":"obsolete dephosphorylation of RNA polymerase II C-terminal domain (obsolete GO:0070940)","synonyms":[{"name":"CTD domain dephosphorylation of RNA polymerase II","type":"exact"},{"name":"generation of II(A) form of RNA polymerase II","type":"exact"},{"name":"generation of hypophosphorylated CTD of RNA polymerase II","type":"exact"}],"termid":"GO:0070940"}


id: PBO:0005056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght1","termid":"PBO:0005056"}


id: GO:0030405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrix metalloproteinase 19 activity (obsolete GO:0030405)","synonyms":[{"name":"MMP-19","type":"exact"},{"name":"matrix metalloproteinase 19 activity","type":"exact"}],"termid":"GO:0030405"}


id: GO:0016268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 2 O-glycan structure, GlcNAc-beta-(1->6)[Gal-beta-(1->3)]-GalNAc.","definition_xrefs":["GOC:mah","PMID:10580130","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"O-glycan processing, core 2","termid":"GO:0016268"}


id: GO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a Rel homology domain (RHD) interaction.","definition_xrefs":["InterPro:IPR011539","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete Rel homology domain-mediated complex assembly (obsolete GO:0071531)","synonyms":[{"name":"RHD domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071531"}


id: GO:1905081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cerebellar neuron development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26609159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of cerebellar neuron development","termid":"GO:1905079"},{"relation_name":"positively_regulates","term_name":"cerebellar neuron development","termid":"GO:0098749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cerebellar neuron development","synonyms":[{"name":"activation of cerebellar neuron development","type":"narrow"},{"name":"up regulation of cerebellar neuron development","type":"exact"},{"name":"up-regulation of cerebellar neuron development","type":"exact"},{"name":"upregulation of cerebellar neuron development","type":"exact"}],"termid":"GO:1905081"}


id: PBO:0053925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1222","termid":"PBO:0053925"}


id: GO:1902395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 1-deoxy-D-xylulose-5-phosphate synthase activity.","definition_xrefs":["GOC:TermGenie","PMID:23612965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity","synonyms":[{"name":"regulation of 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating) activity","type":"exact"},{"name":"regulation of 1-deoxyxylulose-5-phosphate synthase activity","type":"exact"},{"name":"regulation of DOXP synthase activity","type":"exact"},{"name":"regulation of DXP-synthase activity","type":"exact"},{"name":"regulation of pyruvate:D-glyceraldehyde-3-phosphate acetaldehydetransferase (decarboxylating)","type":"exact"}],"termid":"GO:1902395"}


id: GO:0035750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, the abaxonal region of the myelin sheath. The abaxonal region is the region of the myelin sheath furthest from the axon.","definition_xrefs":["GOC:BHF","PMID:20237282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to myelin sheath abaxonal region","synonyms":[{"name":"protein localisation to myelin sheath abaxonal region","type":"exact"}],"termid":"GO:0035750"}


id: PBO:0066897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 197","termid":"PBO:0066897"}


id: PBO:0056034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene B4 receptor","termid":"PBO:0056034"}


id: GO:0032059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["PMID:12083798","PMID:16624291","GOC:mtg_apoptosis","Wikipedia:Bleb_(cell_biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bleb","synonyms":[{"name":"plasma membrane bleb","type":"exact"}],"termid":"GO:0032059"}


id: GO:1902493
data:
  {"annotated_genes":["SJAG_01658","SJAG_02165","SJAG_02726","SJAG_00349","SJAG_00783","SJAG_02629","SJAG_00676","SJAG_00187","SJAG_00184","SJAG_04631","SJAG_00545","SJAG_00087","SJAG_04274","SJAG_04613","SJAG_03036","SJAG_04097","SJAG_00641","SJAG_03752","SJAG_01475","SJAG_03776","SJAG_03628","SJAG_03792","SJAG_02066","SJAG_00584","SJAG_01016","SJAG_02385","SJAG_04205","SJAG_02458","SJAG_02541","SJAG_03599","SJAG_01826","SJAG_05282","SJAG_04815","SJAG_04179","SJAG_01385","SJAG_04131","SJAG_06449","SJAG_02990","SJAG_03230","SJAG_03045","SJAG_01711","SJAG_03215","SJAG_03579","SJAG_02920","SJAG_04355","SJAG_00411","SJAG_03145","SJAG_03668","SJAG_02773","SJAG_04793","SJAG_02927","SJAG_01009"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043189"},{"annotations":[84545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000123"},{"annotations":[95725,86844,100476,101341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[112828,85498,106461,113994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[98615,111378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[99637,101520,108829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"},{"annotations":[103965,90023,101342,102547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[95726,109190,90078,95015,93298,97739,90374,100088,88441,97022,102914,114568,108279,111627,105108,100753,86783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[93890,108590,113625,101802,110344,111417,103728,112323,113576,94570,87482,107789,84608,109017,84460,85382,99423,102938,103370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[69887,62457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of acetyltransferase activity.","definition_xrefs":["GOC:bhm","PMID:8077207","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00411":null,"SJAG_00545":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00783":null,"SJAG_01009":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01826":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02385":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02629":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02920":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03045":null,"SJAG_03145":null,"SJAG_03215":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03628":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04631":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_05282":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902493","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0031415":null,"GO:0031416":null,"GO:0031417":null,"GO:0033100":null,"GO:0035267":null,"GO:0036410":null,"GO:0043189":null,"GO:0046695":null,"GO:1990467":null}}


id: GO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 3Fe-4S iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["RESID:AA0139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron tetrasulphide","type":"exact"}],"termid":"GO:0018287"}


id: PBO:0016077
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dhp1 INteracting protein","termid":"PBO:0016077"}


id: FYPO:0000549
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115477,115476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein modification is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"normal protein modification during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal protein modification during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000549","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0034789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase Msp1","termid":"PBO:0034789"}


id: GO:0050030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-pipecolate + acceptor = delta1-piperideine-6-carboxylate + reduced acceptor. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["MetaCyc:L-PIPECOLATE-DEHYDROGENASE-RXN","EC:1.5.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-pipecolate dehydrogenase activity","secondary_identifiers":["RHEA:19777"],"synonyms":[{"name":"L-pipecolate:(acceptor) 1,6-oxidoreductase activity","type":"related"},{"name":"L-pipecolate:acceptor 1,6-oxidoreductase activity","type":"related"}],"termid":"GO:0050030"}


id: FYPO:0002249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of fructose binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased fructose binding","synonyms":[{"name":"reduced fructose binding","type":"exact"}],"termid":"FYPO:0002249"}


id: PBO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3101","termid":"PBO:0015699"}


id: GO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = alpha-D-galactosyl-beta-D-galactosyldiacylglycerol + 1,2-diacylglycerol.","definition_xrefs":["EC:2.4.1.184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactolipid galactosyltransferase activity","secondary_identifiers":["RHEA:15921","MetaCyc:RXN-1226"],"synonyms":[{"name":"3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol:mono-3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol beta-D-galactosyltransferase activity","type":"related"},{"name":"DGDG synthase activity","type":"broad"},{"name":"GGGT activity","type":"related"},{"name":"digalactosyldiacylglycerol synthase activity","type":"broad"},{"name":"galactolipid-galactolipid galactosyltransferase activity","type":"related"},{"name":"galactolipid:galactolipid galactosyltransferase activity","type":"exact"},{"name":"interlipid galactosyltransferase activity","type":"related"}],"termid":"GO:0046480"}


id: PR:Q9US42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- urg3 gene.","definition_xrefs":["UniProtKB:Q9US42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein urg3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.18","synonyms":[{"name":"Spom972h-urg3","type":"exact"}],"termid":"PR:Q9US42"}


id: PBO:0111066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cnt5","termid":"PBO:0111066"}


id: PBO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4 (predicted)","termid":"PBO:0008894"}


id: GO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + all-trans-retinyl ester = 11-cis-retinol + fatty acid.","definition_xrefs":["RHEA:31771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","secondary_identifiers":["MetaCyc:RXN-12550","EC:3.1.1.64","KEGG_REACTION:R08388"],"synonyms":[{"name":"all-trans-retinol isomerase:hydrolase activity","type":"broad"},{"name":"all-trans-retinyl ester acylhydrolase, 11-cis retinol forming activity","type":"related"},{"name":"all-trans-retinylester 11-cis isomerohydrolase activity","type":"related"},{"name":"retinoid isomerohydrolase activity","type":"broad"},{"name":"retinol isomerase activity","type":"broad"}],"termid":"GO:0052885"}


id: GO:0018600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-pinene + O2 + 2 H+ + 2 e- = H2O + myrtenol.","definition_xrefs":["UM-BBD_reactionID:r0709"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-pinene dehydrogenase activity (obsolete GO:0018600)","termid":"GO:0018600"}


id: PBO:0048036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicle stimulating hormone subunit beta","termid":"PBO:0048036"}


id: GO:0018754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammelide + H2O = cyanuric acid + NH3.","definition_xrefs":["PMID:1991731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ammelide aminohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8017"],"termid":"GO:0018754"}


id: FYPO:0000409
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115378,115379,115377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or more cell cycle phase transitions begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"delayed cell cycle phase transition","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle progression: delayed","type":"related"},{"name":"delayed cell cycle phase transition during mitotic cell cycle","type":"related"},{"name":"delayed cell cycle phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000409","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000324":null}}


id: FYPO:0000054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization phenotype","termid":"FYPO:0000297"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization","termid":"FYPO:0000802"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization","secondary_identifiers":["FYPO:0000053"],"synonyms":[{"name":"abnormal microtubule cytoskeleton organisation","type":"exact"},{"name":"abnormal microtubule organisation","type":"related"},{"name":"abnormal microtubule organization","type":"related"},{"name":"disorganized microtubule cytoskeleton","type":"related"},{"name":"microtubule cytoskeleton defects","type":"exact"},{"name":"microtubule organization defects","type":"related"}],"termid":"FYPO:0000054"}


id: GO:0033584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate L-arogenate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via L-arogenate","secondary_identifiers":["MetaCyc:PWY-3461"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine formation from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via L-arogenate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via L-arogenate","type":"broad"}],"termid":"GO:0033584"}


id: PBO:0089302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, citrate","termid":"PBO:0089302"}


id: PBO:0005737
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin subunit CuT3 Interacting protein","termid":"PBO:0005737"}


id: FYPO:0002874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"premature protein localization to cell division site","termid":"FYPO:0007829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"premature protein localization to medial cortex during vegetative growth","synonyms":[{"name":"advanced protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"faster protein localization to medial cortex during vegetative growth","type":"related"},{"name":"premature protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"premature protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"premature protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002874"}


id: MOD:01470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (E)-dehydrobutyrine.","definition_xrefs":["RESID:AA0547","PubMed:1547888","PubMed:20805503","PubMed:3769923","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(E)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2E)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(E)-2-amino-2-butenoic acid","type":"exact"},{"name":"(E)-2-aminobutenoic acid","type":"exact"},{"name":"(E)-dehydrobutyrine","type":"exact"},{"name":"(E)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (E)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01470"}


id: PBO:0080913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 2","termid":"PBO:0080913"}


id: PATO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomer.","definition_xrefs":["neurolex:http://neurolex.org/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinated","synonyms":[{"name":"Ubiquitylation","type":"related"}],"termid":"PATO:0002216"}


id: FYPO:0000630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal biofilm formation","termid":"FYPO:0000630"}


id: PBO:0031610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_transport","termid":"PBO:0031610"}


id: GO:0140303
data:
  {"annotated_genes":["SJAG_02957","SJAG_01470","SJAG_03050","SJAG_00669","SJAG_01945","SJAG_02943","SJAG_00587","SJAG_00018","SJAG_02516","SJAG_03100","SJAG_02114","SJAG_01095","SJAG_02897","SJAG_01731","SJAG_00589","SJAG_02132","SJAG_02581","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86628,86634,86631,86629,101115,86630,86626,98396,86632,86627,86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[90499,94002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[95530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[94004,90501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[96247,90502,94005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[94006,95532,90503,96248,108541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[95533,108543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[90504,108544,95534,94007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[99651,92696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"}]},"cv_name":"molecular_function","definition":"Enables the transport of a lipid from a region of a membrane to a different region on the same membrane.","definition_xrefs":["PMID:16828084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03100":null,"SJAG_05209":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intramembrane lipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"flippase activity","type":"related"},{"name":"translocase activity","type":"broad"}],"termid":"GO:0140303","terms_by_termid":{"GO:0017128":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: PBO:0059632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 4","termid":"PBO:0059632"}


id: GO:0051756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the centromeres of sister chromatids are physically detached from each other during meiosis.","definition_xrefs":["PMID:16325576","GOC:ai","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere separation","termid":"GO:0034510"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"},{"relation_name":"part_of","term_name":"meiotic sister chromatid separation","termid":"GO:0051757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"meiotic sister chromatid centromere separation","termid":"GO:0051756"}


id: PR:G2TRM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.17","synonyms":[{"name":"Spom972h-coa2","type":"exact"}],"termid":"PR:G2TRM8"}


id: PBO:0091927
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gcnFour Induction Like","termid":"PBO:0091927"}


id: GO:0032074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclease activity","termid":"GO:0032069"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclease activity","synonyms":[{"name":"down regulation of nuclease activity","type":"exact"},{"name":"down-regulation of nuclease activity","type":"exact"},{"name":"downregulation of nuclease activity","type":"exact"},{"name":"inhibition of nuclease activity","type":"narrow"},{"name":"nuclease inhibitor","type":"related"}],"termid":"GO:0032074"}


id: GO:0086081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of an atrial cardiomyocyte with an AV node cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098631","GO:0005515"],"is_obsolete":false,"name":"cell adhesive protein binding involved in atrial cardiac muscle cell-AV node cell communication","synonyms":[{"name":"cell adhesive protein binding involved in atrial cardiomyocyte-AV node cell communication","type":"exact"},{"name":"cell adhesive protein binding involved in atrial cardiomyocyte-atrioventricular node cell communication","type":"exact"}],"termid":"GO:0086081"}


id: GO:1902972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication DNA ligation","termid":"GO:1902333"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"premeiotic DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in meiotic DNA replication","type":"exact"},{"name":"DNA ligation involved in meiotic cell cycle DNA replication","type":"related"}],"termid":"GO:1902972"}


id: GO:0036295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting an increase in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to increased oxygen levels","termid":"GO:0036296"},{"relation_name":"is_a","term_name":"cellular response to oxygen levels","termid":"GO:0071453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to increased oxygen levels","synonyms":[{"name":"cellular response to raised oxygen levels","type":"exact"}],"termid":"GO:0036295"}


id: GO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which the polar microtubules elongate and the two poles of the spindle move farther apart as part of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic anaphase","termid":"GO:0000090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000090"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0000087","GO:0000090","GO:0008150"],"is_obsolete":false,"name":"mitotic anaphase B","termid":"GO:0000092"}


id: PR:P87147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nascent polypeptide-associated complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03638","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.05","secondary_identifiers":["UniProtKB:P87147"],"synonyms":[{"name":"NAC-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NACA2","type":"exact"},{"name":"alpha-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87147"}


id: PBO:0073013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit alpha","termid":"PBO:0073013"}


id: GO:0061308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell development","termid":"GO:0014032"},{"relation_name":"part_of","term_name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}


id: PBO:0110260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb11","termid":"PBO:0110260"}


id: GO:0045049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which N-terminal cleaved signal sequences direct polypeptides to the ER.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein insertion into ER membrane by N-terminal cleaved signal sequence","synonyms":[{"name":"N-terminal cleaved signal sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, N-terminal cleaved signal sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by N-terminal cleaved signal sequence","type":"exact"},{"name":"protein-ER insertion by N-terminal cleaved signal sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by N-terminal cleaved signal sequence","type":"exact"}],"termid":"GO:0045049"}


id: PBO:0036538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase Uro1","termid":"PBO:0036538"}


id: GO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-3 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-3 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-3_receptor"],"synonyms":[{"name":"IL-3 receptor activity","type":"exact"},{"name":"IL-3R","type":"exact"}],"termid":"GO:0004912"}


id: PBO:0088281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase","termid":"PBO:0088281"}


id: PATO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having three lobes.","direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trilobed","termid":"PATO:0002241"}


id: GO:0050284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + sinapate = UDP + 1-sinapoyl-D-glucose.","definition_xrefs":["MetaCyc:SINAPATE-1-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"sinapate 1-glucosyltransferase activity","secondary_identifiers":["RHEA:13305"],"synonyms":[{"name":"UDP-glucose:sinapate D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:sinapate D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:sinapic acid glucosyltransferase activity","type":"related"},{"name":"uridine 5'-diphosphoglucose-hydroxycinnamic acid acylglucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-sinapate glucosyltransferase activity","type":"related"}],"termid":"GO:0050284"}


id: PBO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn5","termid":"PBO:0001871"}


id: PBO:0069500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 767, pseudogene","termid":"PBO:0069500"}


id: GO:0033427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"CAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamine tRNA","type":"related"}],"termid":"GO:0033427"}


id: SO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 3 modification where the modification is the acetylation of the residue.","definition_xrefs":["EBI:nj","SO:ke","ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_3_acetylation_site","synonyms":[{"name":"H3ac","type":"exact"},{"name":"histone 3 acetylation site","type":"exact"}],"termid":"SO:0001973"}


id: GO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus under conditions of oxidative stress.","definition_xrefs":["GOC:al","PMID:9585505"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus in response to oxidative stress (obsolete GO:0036283)","synonyms":[{"name":"positive regulation of transcription factor import into nucleus in response to hydrogen peroxide","type":"related"}],"termid":"GO:0036283"}


id: PBO:0059418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 4","termid":"PBO:0059418"}


id: GO:0110056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin filament annealing, i.e. the end-to-end joining of existing actin filaments.","definition_xrefs":["PMID:10585915","PMID:11575927","GOC:mah","PMID:19244341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament annealing","termid":"GO:0110054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament annealing","termid":"GO:0110056"}


id: PBO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 4 pseudogene","termid":"PBO:0062163"}


id: GO:0046567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate + H2O = aphidicolan-16-beta-ol + diphosphate.","definition_xrefs":["EC:4.2.3.42","PMID:12149019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aphidicolan-16 beta-ol synthase activity","secondary_identifiers":["RHEA:26213","KEGG_REACTION:R06313","MetaCyc:RXN-10631"],"synonyms":[{"name":"9-alpha-copalyl-diphosphate diphosphate-lyase (aphidicolan-16-beta-ol-forming)","type":"related"}],"termid":"GO:0046567"}


id: PBO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit H (predicted)","termid":"PBO:0001641"}


id: PBO:0086831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function identified by gene-trapping; microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element","termid":"PBO:0086831"}


id: PBO:0074217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 3","termid":"PBO:0074217"}


id: GO:0005115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor tyrosine kinase-like orphan receptor (Ror).","definition_xrefs":["GOC:vw","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"receptor tyrosine kinase-like orphan receptor binding","synonyms":[{"name":"Ror binding","type":"broad"},{"name":"Ror ligand","type":"related"},{"name":"receptor tyrosine kinase-like orphan receptor ligand","type":"narrow"}],"termid":"GO:0005115"}


id: PBO:0017053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U3B","termid":"PBO:0017053"}


id: PBO:0055904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 27","termid":"PBO:0055904"}


id: PBO:0070219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 152 pseudogene","termid":"PBO:0070219"}


id: GO:0001216
data:
  {"annotated_genes":["SJAG_01062","SJAG_04036","SJAG_02730","SJAG_02252","SJAG_02472","SJAG_01694","SJAG_03484","SJAG_05153","SJAG_03879","SJAG_03519","SJAG_02311","SJAG_05288","SJAG_01243","SJAG_02326","SJAG_04092","SJAG_04388","SJAG_04855","SJAG_03538","SJAG_04813","SJAG_05247","SJAG_04249","SJAG_02218","SJAG_00266","SJAG_03241","SJAG_03346","SJAG_04712","SJAG_02406","SJAG_01583","SJAG_00693","SJAG_04839","SJAG_02810","SJAG_00802","SJAG_00210","SJAG_01916","SJAG_03143","SJAG_00698","SJAG_03735","SJAG_00163","SJAG_00987","SJAG_03183","SJAG_04009","SJAG_01307","SJAG_04749"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105402],"is_not":false,"summary":null,"term":"GO:0001216"},{"annotations":[105741,107966,107965,110619,85149,114071,91771,107925,106773,112118,84081,84576,88820,102147,103096,101874,87987,89784,95857,94185,109731,113507,84906,93373,105232,96548,92356,84152,86194,94494,90813,104021,85566,98335,100492,83712,100818,103625,89359,95556,104851,110129,105096,105233,112512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001228"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00802":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01916":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0140110","GO:0003674","GO:0003700"],"is_obsolete":false,"name":"DNA-binding transcription activator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001215","GO:0001140"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"related"},{"name":"bacterial-type RNA polymerase transcriptional activator activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional activator activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"related"}],"termid":"GO:0001216","terms_by_termid":{"GO:0001216":null,"GO:0001228":null}}


id: GO:0052504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of callose deposition by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont callose deposition (obsolete GO:0052504)","synonyms":[{"name":"induction by organism of defense-related papilla formation in symbiont","type":"narrow"},{"name":"induction by organism of defense-related symbiont callose deposition","type":"narrow"},{"name":"positive regulation by organism of defense-related papilla formation in symbiont","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052504"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: PBO:0085599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in C/D snoRNP assembly; regulates abundance of Rsa1p; required for growth at high temperature; similar to human ZNHIT3","termid":"PBO:0085599"}


id: PBO:0062663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily E member 1 pseudogene","termid":"PBO:0062663"}


id: PBO:0055367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2796","termid":"PBO:0055367"}


id: GO:0036501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex that contains the co-factors for the ATPase VCP/p97 (Cdc48p in budding yeast). In mammals, this complex consists of UFD1L (UFD1) and NPLOC4 (NPL4). In budding yeast, the complex is a dimer of Ufd1p and Npl4p.","definition_xrefs":["PMID:17289586","GOC:bf","GOC:PARL","PMID:10811609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"UFD1-NPL4 complex","synonyms":[{"name":"Npl4p-Ufd1p complex","type":"exact"},{"name":"UFD1L-NPLOC4 complex","type":"exact"},{"name":"Ufd1-Npl4 binary complex","type":"exact"},{"name":"Ufd1-Npl4 cofactor complex","type":"exact"},{"name":"Ufd1/Npl4 complex","type":"exact"}],"termid":"GO:0036501"}


id: PATO:0001005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A time quality inhering in a bearer by virtue of the time it elapses for the bearer to respond to a stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed","termid":"PATO:0000502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latency","termid":"PATO:0001005"}


id: GO:0009120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["ISBN:0140512713","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside metabolic process","synonyms":[{"name":"deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0009120"}


id: PBO:0043752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7C","termid":"PBO:0043752"}


id: PBO:0046941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member C","termid":"PBO:0046941"}


id: PBO:0078035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 25 (non-functional)","termid":"PBO:0078035"}


id: PBO:0049301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 3 pseudogene 1","termid":"PBO:0049301"}


id: GO:0098649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidyl-dipeptidase A inhibitor stimulus.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete response to peptidyl-dipeptidase A inhibitor (obsolete GO:0098649)","synonyms":[{"name":"response to ACE inhibitor","type":"narrow"},{"name":"response to angiotensin-converting enzyme inhibitor","type":"narrow"}],"termid":"GO:0098649"}


id: PBO:0056005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4","termid":"PBO:0056005"}


id: PBO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-nucleosidyl)-tetraphosphatase","termid":"PBO:0005147"}


id: GO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole metabolic process","termid":"GO:0042431"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole catabolic process","synonyms":[{"name":"indole breakdown","type":"exact"},{"name":"indole catabolism","type":"exact"},{"name":"indole degradation","type":"exact"}],"termid":"GO:0042433"}


id: PBO:0042608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 8","termid":"PBO:0042608"}


id: PBO:0055911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 2","termid":"PBO:0055911"}


id: SO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including J-heptamer, J-spacer and J-nonamer in 5' of J-region of a J-gene or J-sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_gene_recombination_feature","synonyms":[{"name":"J gene recombination feature","type":"exact"},{"name":"J-RS","type":"exact"}],"termid":"SO:0000302"}


id: PBO:0083875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein that regulates pheromone-dependent morphogenesis; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain","termid":"PBO:0083875"}


id: PBO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidyl transferase Rev1","termid":"PBO:0090405"}


id: PBO:0050550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparanase 2 (inactive)","termid":"PBO:0050550"}


id: PBO:0059904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 27","termid":"PBO:0059904"}


id: PBO:0058155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4450","termid":"PBO:0058155"}


id: PBO:0064109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD1 antisense RNA 1","termid":"PBO:0064109"}


id: PBO:0040549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNT2 pseudogene 1","termid":"PBO:0040549"}


id: GO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a phenylpropanoid stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. A phenylpropanoid is any of secondary metabolites with structures based on a phenylpropane skeleton. The class includes phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules. Phenylpropanoids are also precursors of lignin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylpropanoid","termid":"GO:0080184"}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: GO:1905153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane invagination.","definition_xrefs":["PMID:26589353","GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of membrane invagination","termid":"GO:1905153"}


id: FYECO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing water only.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water medium","termid":"FYECO:0000100"}


id: GO:0106196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic anions linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to the hydrolysis of a nucleoside triphosphate (obsolete GO:0106196)","secondary_identifiers":["EC:7.3.2.-"],"termid":"GO:0106196"}


id: GO:0042669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into an auditory hair cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of inner ear auditory receptor cell differentiation","termid":"GO:0045607"},{"relation_name":"regulates","term_name":"auditory receptor cell fate specification","termid":"GO:0042667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear auditory receptor cell fate specification","synonyms":[{"name":"regulation of auditory hair cell fate specification","type":"exact"}],"termid":"GO:0042669"}


id: PBO:0055299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2726","termid":"PBO:0055299"}


id: PBO:0081288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72A, pseudogene","termid":"PBO:0081288"}


id: FYPO:0005546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during S phase of the mitotic cell cycle. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein-protein interaction during mitotic S phase","synonyms":[{"name":"decreased protein binding during mitotic S phase","type":"exact"},{"name":"reduced protein-protein interaction during mitotic S phase","type":"exact"}],"termid":"FYPO:0005546"}


id: PBO:0077213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 4","termid":"PBO:0077213"}


id: PBO:0080353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 7 pseudogene","termid":"PBO:0080353"}


id: MOD:00601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively produces an heterocyclic amino acid with a covalent bond between the side chain and either its alpha amino or 1-carboxyl group, possibly breaking the peptide chain.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized residue","synonyms":[{"name":"CycRes","type":"exact"}],"termid":"MOD:00601"}


id: GO:1904479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal absorption.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","PMID:12469120","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"negatively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal absorption","synonyms":[{"name":"down regulation of intestinal absorption","type":"exact"},{"name":"down-regulation of intestinal absorption","type":"exact"},{"name":"downregulation of intestinal absorption","type":"exact"},{"name":"inhibition of intestinal absorption","type":"narrow"}],"termid":"GO:1904479"}


id: GO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heparan sulfate proteoglycan binding","synonyms":[{"name":"heparin proteoglycan binding","type":"related"}],"termid":"GO:0043395"}


id: PBO:0076079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin interacting protein 1","termid":"PBO:0076079"}


id: PBO:0080233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VLDLR antisense RNA 1","termid":"PBO:0080233"}


id: FYPO:0002920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 36 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K36 methylation during vegetative growth","synonyms":[{"name":"normal histone H3 K36 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K36 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K36me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K36 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002920"}


id: GO:1902311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:di","PMID:21489137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of copper ion transmembrane transport","synonyms":[{"name":"regulation of copper cation transmembrane transport","type":"exact"},{"name":"regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902311"}


id: GO:0046391
data:
  {"annotated_genes":["SJAG_04970","SJAG_04882","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93782,105965,110997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006015"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5-phosphoribose 1-diphosphate, also known as 5-phosphoribosyl-1-pyrophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate metabolic process","termid":"GO:0019693"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-phosphoribose 1-diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PRPP-PWY"],"synonyms":[{"name":"5-phosphoribose 1-diphosphate metabolism","type":"exact"},{"name":"PRPP metabolic process","type":"exact"}],"termid":"GO:0046391","terms_by_termid":{"GO:0006015":null}}


id: PBO:0048928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi membrane protein 1","termid":"PBO:0048928"}


id: PBO:0069036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 281, pseudogene","termid":"PBO:0069036"}


id: GO:0045841
data:
  {"annotated_genes":["SJAG_04699","SJAG_01297","SJAG_01679","SJAG_03126","SJAG_00883","SJAG_01837","SJAG_01330","SJAG_04259","SJAG_01082","SJAG_02451","SJAG_03681","SJAG_04126","SJAG_02336","SJAG_03353","SJAG_02169","SJAG_04884","SJAG_04999"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102354,111590],"is_not":false,"summary":null,"term":"GO:0045841"},{"annotations":[86815,110309,111940,109829,95641,104297,103274,99950,108000],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[95489,105954,110538,97850,109833,86817,111589,112712,102353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[90271],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112716],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90272],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"negative regulation of mitotic nuclear division","termid":"GO:0045839"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid separation","termid":"GO:2000816"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0044772","GO:0000070","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of mitotic metaphase/anaphase transition","type":"narrow"}],"termid":"GO:0045841","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase (predicted)","termid":"PBO:0001675"}


id: PATO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000829 absolute visual ability value (obsolete PATO:0000829)","termid":"PATO:0000829"}


id: PR:O94652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoporin GLE1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12960:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin gle1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.05","secondary_identifiers":["UniProtKB:O94652"],"synonyms":[{"name":"RNA export factor gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC31E1.05","type":"related"},{"name":"Spom972h-GLE1","type":"exact"},{"name":"nuclear pore protein gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94652"}


id: GO:0009569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter, and located in chloroplasts. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch grain","termid":"GO:0043036"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast starch grain","synonyms":[{"name":"chloroplast starch granule","type":"exact"}],"termid":"GO:0009569"}


id: PBO:0070569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 35","termid":"PBO:0070569"}


id: GO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more phosphate groups from thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thiamine diphosphate dephosphorylation","synonyms":[{"name":"TPP dephosphorylation","type":"exact"},{"name":"thiamin diphosphate dephosphorylation","type":"exact"}],"termid":"GO:0042370"}


id: GO:0050438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanate + acetyl-CoA + H2O = (R)-2-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:23040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-ethylmalate synthase activity","secondary_identifiers":["EC:2.3.3.6","MetaCyc:2-ETHYLMALATE-SYNTHASE-RXN","KEGG_REACTION:R00998"],"synonyms":[{"name":"(R)-2-ethylmalate 2-oxobutanoyl-lyase (CoA-acetylating) activity","type":"related"},{"name":"2-ethylmalate-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"acetyl-CoA:2-oxobutanoate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"propylmalate synthase activity","type":"related"},{"name":"propylmalic synthase activity","type":"related"}],"termid":"GO:0050438"}


id: GO:0042065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell growth","termid":"GO:0042065"}


id: GO:0051266
data:
  {"annotated_genes":["SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93871],"is_not":false,"summary":null,"term":"GO:0051266"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: siroheme + 2 H+ = Fe(2+) + sirohydrochlorin.","definition_xrefs":["RHEA:24360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrochelatase activity","termid":"GO:0004325"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sirohydrochlorin ferrochelatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SIROHEME-FERROCHELAT-RXN","EC:4.99.1.4","KEGG_REACTION:R02864"],"synonyms":[{"name":"siroheme ferro-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"siroheme synthase activity","type":"broad"},{"name":"sirohydrochlorin ferro-lyase activity","type":"exact"}],"termid":"GO:0051266","terms_by_termid":{"GO:0051266":null}}


id: GO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of phosphorylation","termid":"GO:0042326"},{"relation_name":"negatively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein phosphorylation","synonyms":[{"name":"down regulation of protein amino acid phosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"downregulation of protein amino acid phosphorylation","type":"exact"},{"name":"inhibition of protein amino acid phosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001933"}


id: GO:0018919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gamma-1,2,3,4,5,6-hexachlorocyclohexane (also known as Lindane), the most common form of hexachlorohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.","definition_xrefs":["UM-BBD_pathwayID:ghch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexachlorocyclohexane metabolic process","termid":"GO:0019497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","secondary_identifiers":["MetaCyc:GAMMAHEXCHLORDEG-PWY"],"synonyms":[{"name":"gamma-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018919"}


id: PBO:0005821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel subunit (predicted)","termid":"PBO:0005821"}


id: FYPO:0000447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of protein complex assembly at the cellular level is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein complex assembly","synonyms":[{"name":"abnormal protein complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal protein complex assembly during vegetative growth","type":"exact"},{"name":"abnormal protein-containing complex assembly","type":"exact"}],"termid":"FYPO:0000447"}


id: PBO:0039828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase 2","termid":"PBO:0039828"}


id: PBO:0072592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRS1 divergent transcript","termid":"PBO:0072592"}


id: PBO:0086625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086625"}


id: PBO:0084324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin/importin that interacts with the nuclear pore complex; acts as the nuclear import receptor for specific proteins, including Pdr1p, Yap1p, Ste12p, and Aft1p; required for stability of the Dam1p-Duo1p complex","termid":"PBO:0084324"}


id: GO:0102978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2,5-dimethylfuran-3-one + NADP = 4-hydroxy-5-methyl-2-methylenefuran-3-one + NADPH + H+.","definition_xrefs":["EC:1.3.1.105","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"furaneol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9564","MetaCyc:RXN-9563","MetaCyc:RXN-9565","RHEA:39111"],"termid":"GO:0102978"}


id: PBO:0075301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2","termid":"PBO:0075301"}


id: PR:O60159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H(+)/Cl(-) exchange transporter 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anion/proton exchange transporter C19C7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.11","secondary_identifiers":["UniProtKB:O60159"],"synonyms":[{"name":"Spom972h-CLCN3","type":"exact"}],"termid":"PR:O60159"}


id: GO:0071182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch4 (ICN4), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN4 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch4 complex","type":"exact"}],"termid":"GO:0071182"}


id: GO:0033655
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of the host cell cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"},{"relation_name":"part_of","term_name":"host cell cytoplasm","termid":"GO:0030430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasm part","synonyms":[{"name":"cytoplasm component","type":"broad"}],"termid":"GO:0033655"}


id: GO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An eating behavior process whereby detection of a dietary excess results in a decrease in intake of nutrients.","definition_xrefs":["GOC:pg","PMID:12161655","GOC:pr","PMID:12840200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating behavior","termid":"GO:0042755"},{"relation_name":"part_of","term_name":"response to dietary excess","termid":"GO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reduction of food intake in response to dietary excess","termid":"GO:0002023"}


id: PBO:0071620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 38","termid":"PBO:0071620"}


id: GO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells. Some or all of the chromosome(s) of the donor cell is transferred into the recipient cell.","definition_xrefs":["Wikipedia:Bacterial_conjugation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidirectional conjugation","synonyms":[{"name":"bacterial conjugation","type":"related"}],"termid":"GO:0009291"}


id: GO:0097629
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90693],"is_not":false,"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"The component of the omegasome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["PMID:24591649","PMID:18725538","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"omegasome membrane","termid":"GO:1903349"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of omegasome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to omegasome membrane","type":"exact"},{"name":"omegasome peripheral membrane","type":"related"}],"termid":"GO:0097629","terms_by_termid":{"GO:0097629":null}}


id: PBO:0069763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1046, pseudogene","termid":"PBO:0069763"}


id: PBO:0069688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 967, pseudogene","termid":"PBO:0069688"}


id: PBO:0087215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase; catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; SAM1 has a paralog, SAM2, that arose from the whole genome duplication","termid":"PBO:0087215"}


id: GO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from the minus end of a microtubule.","definition_xrefs":["GOC:sart","PMID:17452528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"minus-end specific microtubule depolymerization","termid":"GO:0036078"}


id: PBO:0051543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor pseudogene 1","termid":"PBO:0051543"}


id: PBO:0051104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-17 (pseudogene)","termid":"PBO:0051104"}


id: MOD:01072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one potassium atom for one hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium containing modified residue","termid":"MOD:00849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopotassium salt","synonyms":[{"name":"K1Res","type":"exact"}],"termid":"MOD:01072"}


id: PBO:0072462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 26","termid":"PBO:0072462"}


id: PBO:0091328
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Protein Sorting","termid":"PBO:0091328"}


id: PBO:0086451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane glycoprotein; has strong similarity to Vth1p and Pep1p/Vps10p; may be involved in vacuolar protein sorting","termid":"PBO:0086451"}


id: PBO:0051729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 2","termid":"PBO:0051729"}


id: PBO:0034578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell","termid":"PBO:0034578"}


id: GO:0030465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete autophagic death (sensu Fungi) (obsolete GO:0030465)","synonyms":[{"name":"autophagic death (sensu Fungi)","type":"exact"}],"termid":"GO:0030465"}


id: GO:0160153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(27/28) in mitochondrial tRNA = pseudouridine(27/28) in mitochondrial tRNA.","definition_xrefs":["EC:5.4.99.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"mitochondrial tRNA pseudouridine(27/28) synthase activity","secondary_identifiers":["RHEA:42560"],"termid":"GO:0160153"}


id: GO:1904370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to actin cortical patch","synonyms":[{"name":"regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904370"}


id: PBO:0080299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 63 pseudogene","termid":"PBO:0080299"}


id: PBO:0086927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate kinase; appears to be modulated by phosphorylation; transcription repressed by glucose, and Pyk2p may be active under low glycolytic flux; PYK2 has a paralog, CDC19, that arose from the whole genome duplication","termid":"PBO:0086927"}


id: PBO:0041427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 58","termid":"PBO:0041427"}


id: _global:interaction_double_mutant_genotype
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_double_mutant_genotype","termid":"_global:interaction_double_mutant_genotype"}


id: PBO:0017740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog Tma19/Tpt1","termid":"PBO:0017740"}


id: GO:0060609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the hollowing out of an epithelial rod or cord to form the central hole in a tube.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in tube lumen cavitation","synonyms":[{"name":"apoptosis involved in tube lumen cavitation","type":"narrow"}],"termid":"GO:0060609"}


id: SO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_thiouridine","secondary_identifiers":["RNAMOD:058"],"synonyms":[{"name":"4-thiouridine","type":"exact"},{"name":"four thiouridine","type":"exact"},{"name":"s4U","type":"exact"}],"termid":"SO:0001350"}


id: GO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"peptide antibiotic catabolic process","synonyms":[{"name":"peptide antibiotic breakdown","type":"exact"},{"name":"peptide antibiotic catabolism","type":"exact"},{"name":"peptide antibiotic degradation","type":"exact"}],"termid":"GO:0030652"}


id: PBO:0040254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 10","termid":"PBO:0040254"}


id: _global:has_part
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Inverse of part_of.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part","secondary_identifiers":["BFO:0000051"],"synonyms":[{"name":"has part","type":"exact"}],"termid":"_global:has_part"}


id: GO:1990631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the protein-tyrosine kinase receptor ErbB-4/HER4.","definition_xrefs":["GOC:sl","PMID:18523588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ErbB-4 class receptor binding","synonyms":[{"name":"HER4 receptor binding","type":"exact"}],"termid":"GO:1990631"}


id: GO:1902878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in spinal cord association neuron specification.","definition_xrefs":["PMID:21730158","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:1902878)","synonyms":[{"name":"regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:1902878"}


id: PBO:0078014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 4","termid":"PBO:0078014"}


id: PBO:0027836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_disassembly","termid":"PBO:0027836"}


id: PBO:0029883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_heterochromatin-encoded_proteins","termid":"PBO:0029883"}


id: GO:0035843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound structure present in the nucleus of a spermatozoon. There is variation in the number of endonuclear canals between sperm of different organisms, and some species lack these structures altogether. The endonuclear canal may provide a supporting role for the sperm nucleus, and originates during spermiogenesis from an invagination of the nuclear envelope.","definition_xrefs":["GOC:bf","PMID:18359585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"male germ cell nucleus","termid":"GO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"endonuclear canal","termid":"GO:0035843"}


id: GO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 2-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["EC:3.1.3.19","RHEA:13105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glycerol-2-phosphatase activity","secondary_identifiers":["MetaCyc:GLYCEROL-2-PHOSPHATASE-RXN","KEGG_REACTION:R01043"],"synonyms":[{"name":"2-glycerophosphatase activity","type":"related"},{"name":"beta-glycerophosphatase activity","type":"related"},{"name":"beta-glycerophosphate phosphatase activity","type":"related"},{"name":"glycerol-2-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047954"}


id: PBO:0109977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109977"}


id: PATO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of giving significant resistance to pressure.","definition_xrefs":["PATOC:CM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"firm","termid":"PATO:0002450"}


id: PR:Q10215
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.07c","secondary_identifiers":["UniProtKB:Q10215"],"synonyms":[{"name":"Spom972h-TSTD1","type":"exact"},{"name":"rhodanese-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10215"}


id: PBO:0078467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-5","termid":"PBO:0078467"}


id: GO:0160124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a guanyl nucleotide exchange factor.","definition_xrefs":["PMID:37463208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"guanyl nucleotide exchange factor activator activity","termid":"GO:0160124"}


id: PBO:0027622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_linear_element_morphology","termid":"PBO:0027622"}


id: GO:0120165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a perithecium over time, from its formation to the mature structure. Peritheicum is a flask-shaped fruiting body of certain molds and ascomycetous fungi having a pore for the escape of spores. In the ascomycetous fungi such as Neurospora crassa and Sordaria macrospora, these perithecia are formed in the sexual phase and they discharge ascospores through the ostiolum at the tip of the perithecial neck.","definition_xrefs":["PMID:20739093","PMID:19547974","PMID:125266","PMID:25311923","DOI:10.1007/978-3-642-00286-1_2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perithecium development","termid":"GO:0120165"}


id: GO:0000014
data:
  {"annotated_genes":["SJAG_04183","SJAG_01948","SJAG_05373","SJAG_02828","SJAG_02556","SJAG_02031"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84674,86484,106079,106870],"is_not":false,"summary":null,"term":"GO:0000014"},{"annotations":[114768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[100214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01948":null,"SJAG_02031":null,"SJAG_02556":null,"SJAG_02828":null,"SJAG_04183":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"single-stranded DNA endodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific endodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific endodeoxyribonuclease activity","type":"related"}],"termid":"GO:0000014","terms_by_termid":{"GO:0000014":null,"GO:1990599":null,"GO:1990601":null}}


id: GO:0006887
data:
  {"annotated_genes":["SJAG_02587","SJAG_04509","SJAG_01772","SJAG_03536","SJAG_04966","SJAG_01925","SJAG_04343","SJAG_02012","SJAG_02368","SJAG_00661","SJAG_00280","SJAG_00332","SJAG_04517","SJAG_03718","SJAG_03763","SJAG_03499","SJAG_03246","SJAG_07004","SJAG_00430","SJAG_02004","SJAG_01697","SJAG_04044","SJAG_02572","SJAG_03915","SJAG_03754","SJAG_03864","SJAG_03938","SJAG_04058","SJAG_01722","SJAG_02529","SJAG_02753","SJAG_01563","SJAG_02518","SJAG_01324","SJAG_03005","SJAG_03357","SJAG_00826","SJAG_01048","SJAG_02166","SJAG_02320","SJAG_00355","SJAG_04960","SJAG_01448","SJAG_02366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84112,84517,84875,86839,87226,87366,87550,88089,88342,89934,90316,91065,91101,93524,96898,97972,98714,101102,103429,104248,108951,109981,111679,112262,113158,113562,114541,114834],"is_not":false,"summary":null,"term":"GO:0006887"},{"annotations":[96229],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[89918,84020,94472],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[96307,114215,114440,85820,86670,88401,113527,114837],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[95603,109916,97974,86841,114838,110198,84743,113740],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for example of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.","definition_xrefs":["ISBN:0716731363","PMID:22323285","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01324":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02529":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016194","GO:0016195","Wikipedia:Exocytosis"],"synonyms":[{"name":"nonselective vesicle exocytosis","type":"related"},{"name":"vesicle exocytosis","type":"exact"}],"termid":"GO:0006887","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: PR:O59827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disulfide-bond oxidoreductase YfcG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.07c","secondary_identifiers":["UniProtKB:O59827"],"synonyms":[{"name":"GST-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yfcG","type":"exact"}],"termid":"PR:O59827"}


id: FYPO:0002117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified transporter activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002114","FYPO:0000138","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished transporter activity","synonyms":[{"name":"transporter activity abolished","type":"exact"}],"termid":"FYPO:0002117"}


id: PBO:0070677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 48","termid":"PBO:0070677"}


id: PBO:0079133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic stromal lymphopoietin","termid":"PBO:0079133"}


id: GO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute behavioral change resulting from a perceived external threat.","definition_xrefs":["PMID:9920659","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral defense response","termid":"GO:0002209"},{"relation_name":"is_a","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral fear response","synonyms":[{"name":"behavioural fear response","type":"exact"}],"termid":"GO:0001662"}


id: PBO:0091818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aberrant Microtubules when Overexpressed","termid":"PBO:0091818"}


id: FYPO:0002882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription","synonyms":[{"name":"normal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0002882"}


id: GO:0070809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of Hulle cell development","termid":"GO:0070808"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Hulle cell development","termid":"GO:0070809"}


id: FYPO:0007175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during mitotic interphase","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localization to plasma membrane at cell division site abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007175"}


id: PBO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies2","termid":"PBO:0001540"}


id: FYPO:0000650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index","synonyms":[{"name":"increased number of septated cells","type":"exact"},{"name":"increased septation","type":"related"},{"name":"septated","type":"related"}],"termid":"FYPO:0000650"}


id: FYPO:0000975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to mercury ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to mercury ion","synonyms":[{"name":"normal cellular response to mercury","type":"exact"},{"name":"normal cellular response to mercury ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to mercury ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000975"}


id: GO:0009276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The peptidoglycan layer of the Gram-negative cell envelope. In Gram-negative cells the peptidoglycan is relatively thin (1-2nm) and is linked to the outer membrane by lipoproteins. In Gram-negative cells the peptidoglycan is too thin to retain the primary stain in the Gram staining procedure and therefore cells appear red after Gram stain.","definition_xrefs":["ISBN:0815108893","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-based cell wall","termid":"GO:0009274"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell wall","synonyms":[{"name":"1-2nm peptidoglycan-based cell wall","type":"exact"},{"name":"cell wall inner membrane","type":"exact"}],"termid":"GO:0009276"}


id: GO:1902141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["PMID:16496115","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to inositol","termid":"GO:1902140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to inositol","termid":"GO:1902141"}


id: GO:1903784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["PMID:19376779","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:nc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"positively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion import across plasma membrane","synonyms":[{"name":"activation of sodium ion import across plasma membrane","type":"narrow"},{"name":"up regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"up-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"upregulation of sodium ion import across plasma membrane","type":"exact"}],"termid":"GO:1903784"}


id: FYPO:0003908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of genes that are expressed in response to stress measured in a cell is greater than normal. All stress-responsive genes, or a specific subset of such genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased stress response gene antisense RNA level","synonyms":[{"name":"increased antisense RNA level at stress response genes","type":"related"},{"name":"increased level of stress response gene antisense transcripts","type":"exact"},{"name":"increased stress response gene antisense RNA accumulation","type":"related"},{"name":"increased stress response gene antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased stress response gene antisense RNA level during vegetative growth","type":"exact"},{"name":"increased stress response gene antisense transcript level","type":"exact"}],"termid":"FYPO:0003908"}


id: PBO:0064664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4G","termid":"PBO:0064664"}


id: GO:0042457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene metabolic process","termid":"GO:0009692"},{"relation_name":"is_a","term_name":"alkene catabolic process","termid":"GO:0043451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"ethylene catabolic process","synonyms":[{"name":"ethene catabolic process","type":"exact"},{"name":"ethene catabolism","type":"exact"},{"name":"ethylene breakdown","type":"exact"},{"name":"ethylene catabolism","type":"exact"},{"name":"ethylene degradation","type":"exact"}],"termid":"GO:0042457"}


id: PBO:0072804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 3","termid":"PBO:0072804"}


id: PR:G2TRR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.10","synonyms":[{"name":"Spom972h-SPBPB21E7.10","type":"exact"}],"termid":"PR:G2TRR8"}


id: PBO:0078843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 5-1","termid":"PBO:0078843"}


id: PR:O94490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.09c gene.","definition_xrefs":["UniProtKB:O94490","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C417.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.09c","synonyms":[{"name":"Spom972h-SPCC417.09c","type":"exact"}],"termid":"PR:O94490"}


id: SO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000760 YAC_clone (obsolete SO:0000760)","termid":"SO:0000760"}


id: PBO:0075710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2D (pseudogene)","termid":"PBO:0075710"}


id: PBO:0086341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudosubstrate inhibitor of the APC/C; suppresses APC/C [Cdh1]-mediated proteolysis of mitotic cyclins; associates with Cdh1p, Bmh1p and Bmh2p; cell cycle regulated protein; the anaphase-promoting complex/cyclosome is also known as APC/C","termid":"PBO:0086341"}


id: PBO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 14","termid":"PBO:0046356"}


id: PBO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acidic_medium","termid":"PBO:0030062"}


id: GO:0050497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alkylthio group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alkylthioltransferase activity","secondary_identifiers":["EC:2.8.4.-"],"synonyms":[{"name":"transferase activity, transferring alkylthio groups","type":"exact"}],"termid":"GO:0050497"}


id: PBO:0047688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 1","termid":"PBO:0047688"}


id: PBO:0046847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7 pseudogene 2","termid":"PBO:0046847"}


id: FYPO:0007468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during G0","termid":"FYPO:0007467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation during G0","synonyms":[{"name":"increased histone H3 K9 dimethylation during G0","type":"exact"},{"name":"increased histone H3-K9 dimethylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 dimethylation during quiescence","type":"exact"},{"name":"increased histone H3K9me2 during G0","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation during G0","type":"exact"}],"termid":"FYPO:0007468"}


id: PBO:0030150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_diethyl_maleate","termid":"PBO:0030150"}


id: PBO:0079003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 3-1","termid":"PBO:0079003"}


id: PBO:0038574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRA C-terminal like","termid":"PBO:0038574"}


id: PBO:0077319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 54","termid":"PBO:0077319"}


id: GO:0052634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C-19 gibberellin + 2-oxoglutarate + O2 = a C-19 2-beta-hydroxygibberellin + succinate + CO2. C-19 gibberellin refers to a gibberellin with nineteen carbons.","definition_xrefs":["GOC:kad","EC:1.14.11.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin 2-beta-dioxygenase activity","termid":"GO:0045543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-19 gibberellin 2-beta-dioxygenase activity","synonyms":[{"name":"(C-19 gibberellin-1),2-oxoglutarate:oxygen oxidoreductase (2beta-hydroxylating)","type":"exact"},{"name":"C(19) gibberellin 2-oxidase activity","type":"exact"},{"name":"C-19 GA 2-oxidase activity","type":"exact"},{"name":"C-19 gibberellin 2-beta-hydroxylase activity","type":"exact"},{"name":"C-19 gibberellin 2-oxidase activity","type":"exact"},{"name":"C-19 gibberellin 2beta-dioxygenase activity","type":"exact"},{"name":"C-19 gibberellin 2beta-hydroxylase activity","type":"exact"}],"termid":"GO:0052634"}


id: PBO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_cells_with_1C_DNA_content","termid":"PBO:0034608"}


id: PATO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000478 poor value (obsolete PATO:0000478)","termid":"PATO:0000478"}


id: PBO:0057285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 505","termid":"PBO:0057285"}


id: PBO:0034042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_hemiplasy_relationship_with","termid":"PBO:0034042"}


id: GO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular enzyme complex that catalyzes the removal of serine- or threonine-bound phosphate groups from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase.","definition_xrefs":["PMID:17517611","PMID:22343722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"magnesium-dependent protein serine/threonine phosphatase complex","termid":"GO:0005963"}


id: PBO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_size","termid":"PBO:0030679"}


id: CHEBI:3312
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dichloride","termid":"CHEBI:3312"}


id: PBO:0066368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 11","termid":"PBO:0066368"}


id: GO:0032953
data:
  {"annotated_genes":["SJAG_04462","SJAG_03705","SJAG_04666","SJAG_04771","SJAG_04668","SJAG_00610","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[88489,83635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[113918,86862,88475,88491,98901,101377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan metabolic process","termid":"GO:0032952"},{"relation_name":"regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1,3-beta-glucan anabolism","type":"exact"},{"name":"regulation of 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"regulation of 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"regulation of 1,3-beta-glucan formation","type":"exact"},{"name":"regulation of 1,3-beta-glucan synthesis","type":"exact"}],"termid":"GO:0032953","terms_by_termid":{"GO:0060635":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0082281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 accessory protein; colocalizes with clathrin to the late-Golgi apparatus; involved in TGN-endosome transport; physically interacts with AP-1; similar to the mammalian p200; may interact with ribosomes; YJL207C is a non-essential gene","termid":"PBO:0082281"}


id: GO:2001135
data:
  {"annotated_genes":["SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84017],"is_not":false,"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocytic recycling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of endocytic recycling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of retrograde transport of endocytic vesicles","type":"related"}],"termid":"GO:2001135","terms_by_termid":{"GO:2001135":null}}


id: PBO:0058643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6772","termid":"PBO:0058643"}


id: PBO:0038516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF1 divergent transcript","termid":"PBO:0038516"}


id: GO:0019764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete high affinity Fc receptor activity (obsolete GO:0019764)","synonyms":[{"name":"high affinity Fc receptor activity","type":"exact"}],"termid":"GO:0019764"}


id: PBO:0069638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 915, pseudogene","termid":"PBO:0069638"}


id: PBO:0031092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_at_high_temperature","termid":"PBO:0031092"}


id: GO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"biotin binding","synonyms":[{"name":"vitamin B7 binding","type":"exact"},{"name":"vitamin H binding","type":"exact"}],"termid":"GO:0009374"}


id: PBO:0050140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 50","termid":"PBO:0050140"}


id: PBO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit alpha","termid":"PBO:0048191"}


id: PBO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 2","termid":"PBO:0042924"}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: GO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex disassembly process that contributes to protein import into the nucleus, and that results in the dissociation of the cargo protein and the carrier (such as an importin alpha/beta heterodimer) from each other and from the nuclear pore complex.","definition_xrefs":["PMID:9687515","PMID:14570049","PMID:9126736","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, substrate release (obsolete GO:0000061)","synonyms":[{"name":"protein import into cell nucleus, substrate release","type":"exact"},{"name":"protein substrate release during protein import into nucleus","type":"exact"},{"name":"protein substrate release during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein substrate release during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, substrate release","type":"exact"},{"name":"protein-nucleus import, substrate release","type":"exact"}],"termid":"GO:0000061"}


id: GO:0102783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-carotene + 2 O2 = 2 beta-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-carotene oxygenase activity (obsolete GO:0102783)","termid":"GO:0102783"}


id: PBO:0028380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hypoxanthine_DNA_N-glycosylase_activity","termid":"PBO:0028380"}


id: PBO:0082737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition","termid":"PBO:0082737"}


id: PBO:0090384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, CENP-A recruiting complex Mis16","termid":"PBO:0090384"}


id: PBO:0028460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_galactose-specific_flocculation","termid":"PBO:0028460"}


id: GO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to low light intensity stimulus","termid":"GO:0071487"}


id: SO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of intron whereby the excision is driven by lariat formation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lariat_intron","synonyms":[{"name":"lariat intron","type":"exact"}],"termid":"SO:0001958"}


id: PBO:0083281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene ABF1","termid":"PBO:0083281"}


id: FYPO:0001383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal DNA content","termid":"FYPO:0001383"}


id: GO:0018031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.","definition_xrefs":["PMID:29074776","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}


id: GO:1900855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fumitremorgin B biosynthetic process (obsolete GO:1900855)","synonyms":[{"name":"regulation of Lanosulin anabolism","type":"related"},{"name":"regulation of Lanosulin biosynthesis","type":"related"},{"name":"regulation of Lanosulin biosynthetic process","type":"related"},{"name":"regulation of Lanosulin formation","type":"related"},{"name":"regulation of Lanosulin synthesis","type":"related"},{"name":"regulation of fumitremorgin B anabolism","type":"exact"},{"name":"regulation of fumitremorgin B biosynthesis","type":"exact"},{"name":"regulation of fumitremorgin B formation","type":"exact"},{"name":"regulation of fumitremorgin B synthesis","type":"exact"}],"termid":"GO:1900855"}


id: GO:0106025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of onset of pupariation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of pupariation","termid":"GO:0106023"},{"relation_name":"positively_regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pupariation","termid":"GO:0106025"}


id: PBO:0029147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029147"}


id: PBO:0066128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 7","termid":"PBO:0066128"}


id: GO:0070877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds to heme and to pri-miRNAs, and is required for the formation of a pre-microRNA (pre-miRNA), the initial step of microRNA (miRNA) biogenesis. The complex is composed of the double-stranded-RNA-specific RNase Drosha (also called RNASEN) and the RNA-binding protein DGCR8 (heme-free or heme-bound forms). Within the complex, DGCR8 function as a molecular anchor necessary for the recognition of pri-miRNA at dsRNA-ssRNA junction and directs RNASEN/Drosha to cleave the 3' and 5' strands of a stem-loop to release hairpin-shaped pre-miRNAs.","definition_xrefs":["PMID:16963499","PMID:17159994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonuclease III complex","termid":"GO:1903095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"microprocessor complex","termid":"GO:0070877"}


id: PBO:0085390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane low glucose sensor, regulates glucose transport; high affinity sensor that contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; also senses fructose and mannose; SNF3 has a paralog, RGT2, that arose from the whole genome duplication","termid":"PBO:0085390"}


id: GO:0031674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end.","definition_xrefs":["ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"I band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"I disc","type":"exact"},{"name":"J disc","type":"exact"},{"name":"isotropic disc","type":"exact"}],"termid":"GO:0031674"}


id: PBO:0031799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_G2/M_phase_transition","termid":"PBO:0031799"}


id: GO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An angiotensin-mediated signaling pathway that contributes to a circulatory system process carried out by the heart, where the activated receptor transmits the signal via Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). DAG activates protein kinase C (PKC), whilst IP3 binds intracellular receptors to induce the release of Ca2+ from intracellular stores.","definition_xrefs":["GOC:BHF","PMID:17376402","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating angiotensin-activated signaling pathway","termid":"GO:0086097"},{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway involved in heart process","termid":"GO:0086098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating angiotensin-activated signaling pathway involved in heart process","synonyms":[{"name":"Gq-coupled angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"PLC-activating angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"angiotensin receptor signaling pathway via activation of phospholipase C involved in heart process","type":"exact"},{"name":"cardiac angiotensin receptor signaling pathway via activation of PLC","type":"exact"},{"name":"phospholipase C-activating angiotensin-mediated signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086099"}


id: PBO:0040356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 5","termid":"PBO:0040356"}


id: PBO:0053867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1142","termid":"PBO:0053867"}


id: SO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of peptide with secondary structure has hydrogen bonding along the peptide chain that causes a defined conformation of the chain.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_secondary_structure","secondary_identifiers":["BS:00003","http://en.wikipedia.org/wiki/Secondary_structure"],"synonyms":[{"name":"2nary structure","type":"related"},{"name":"polypeptide secondary structure","type":"exact"},{"name":"secondary structure","type":"related"},{"name":"secondary structure region","type":"related"},{"name":"secondary_structure","type":"related"}],"termid":"SO:0001078"}


id: GO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a J-chain-containing polymeric immunoglobulin of the IgA or IgM isotypes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polymeric immunoglobulin binding","termid":"GO:0001790"}


id: GO:0043136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 3-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-8955794","MetaCyc:GLYCEROL-1-PHOSPHATASE-RXN"],"termid":"GO:0043136"}


id: PBO:0056167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 2","termid":"PBO:0056167"}


id: GO:1900112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 trimethylation (obsolete GO:1900112)","termid":"GO:1900112"}


id: PBO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 1","termid":"PBO:0061701"}


id: FYECO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"LNB medium is a Low Nutrient medium containing yeast nitrogen base without amino acids, glucose, salts and vitamins.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNB glucose medium","termid":"FYECO:0000328"}


id: PBO:0062434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 97 pseudogene","termid":"PBO:0062434"}


id: GO:0099159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of synaptic structure","termid":"GO:1905244"},{"relation_name":"regulates","term_name":"modification of postsynaptic structure","termid":"GO:0099010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic structure","synonyms":[{"name":"regulation of postsynapse remodelling","type":"exact"}],"termid":"GO:0099159"}


id: PBO:0080669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 21, pseudogene","termid":"PBO:0080669"}


id: PBO:0028282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028282"}


id: GO:1905261
data:
  {"annotated_genes":["SJAG_00100","SJAG_03048","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104401,98434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[112278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["GOC:TermGenie","PMID:26653857","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation","termid":"GO:1903341"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905261","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: PBO:0072208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 7","termid":"PBO:0072208"}


id: FYPO:0006103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short cytoplasmic microtubules","termid":"FYPO:0002760"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"short interphase microtubules","synonyms":[{"name":"short cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules","type":"exact"},{"name":"short interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006103"}


id: PBO:0076981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase 1, pseudogene","termid":"PBO:0076981"}


id: PBO:0078149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 27","termid":"PBO:0078149"}


id: PBO:0084747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial lysine-tRNA synthetase; required for import of both aminoacylated and deacylated forms of tRNA(Lys) into mitochondria and for aminoacylation of mitochondrially encoded tRNA(Lys)","termid":"PBO:0084747"}


id: PBO:0089591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Thi5","termid":"PBO:0089591"}


id: PBO:0074409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 12","termid":"PBO:0074409"}


id: PBO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_activator","termid":"PBO:0000018"}


id: PBO:0046168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 5","termid":"PBO:0046168"}


id: PBO:0091627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA","termid":"PBO:0091627"}


id: PBO:0004879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex subunit Eaf7","termid":"PBO:0004879"}


id: PBO:0073158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit gamma","termid":"PBO:0073158"}


id: PBO:0087362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific activator of Chs3p (chitin synthase III); required for the synthesis of the chitosan layer of ascospores; transcriptionally induced at alkaline pH; SHC1 has a paralog, SKT5, that arose from the whole genome duplication","termid":"PBO:0087362"}


id: PBO:0072877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 2","termid":"PBO:0072877"}


id: PBO:0073971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 20, pseudogene","termid":"PBO:0073971"}


id: GO:0038078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of innate immune response (obsolete GO:0038078)","synonyms":[{"name":"MAPK phosphatase activity involved in regulation of innate immune response","type":"exact"}],"termid":"GO:0038078"}


id: FYPO:0000532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic cell cycle arrest in response to pheromone is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"decreased pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: decreased","type":"related"},{"name":"reduced mitotic cell cycle arrest in response to pheromone","type":"exact"}],"termid":"FYPO:0000532"}


id: SO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA_gene","synonyms":[{"name":"ncRNA gene","type":"exact"},{"name":"non-coding RNA gene","type":"exact"}],"termid":"SO:0001263"}


id: PBO:0070346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 19","termid":"PBO:0070346"}


id: PBO:0077834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP73 antisense RNA 2","termid":"PBO:0077834"}


id: PBO:0047450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor and transporter","termid":"PBO:0047450"}


id: GO:0030687
data:
  {"annotated_genes":["SJAG_02644","SJAG_02427","SJAG_00271","SJAG_04346","SJAG_04395","SJAG_03697","SJAG_02759","SJAG_03012","SJAG_04491","SJAG_02830","SJAG_00311","SJAG_04492","SJAG_02436","SJAG_01606","SJAG_00689","SJAG_01454","SJAG_04992","SJAG_03413","SJAG_03496","SJAG_01275","SJAG_04330","SJAG_03466","SJAG_00882","SJAG_01494","SJAG_03719","SJAG_00722","SJAG_01839","SJAG_01811"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85724,86909,88168,88872,88959,89266,90905,94040,94046,95235,95513,96456,98571,99565,102036,103993,106852,108327,112204,112269,112690,113309,114193,114895],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[84053,88078,93950],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[108477,88079,84054],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00271":null,"SJAG_00311":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_01275":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02644":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03012":null,"SJAG_03413":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0030684","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"preribosome, large subunit precursor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome","type":"narrow"}],"termid":"GO:0030687","terms_by_termid":{"GO:0030687":null,"GO:0030690":null,"GO:0030691":null}}


id: PBO:0054502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1902","termid":"PBO:0054502"}


id: GO:0140341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:10029989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"phosphatidylethanolamine floppase activity","synonyms":[{"name":"phosphatidylethanolamine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"}],"termid":"GO:0140341"}


id: PBO:0017015
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orc4 binding footprint at replication origins is extended in G1 in the presence of Cdc1 and the MCM complex","termid":"PBO:0017015"}


id: PR:P0CT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.09c","synonyms":[{"name":"EF-1-alpha-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef101","type":"exact"}],"termid":"PR:P0CT53"}


id: GO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticotropin-releasing hormone, a polypeptide hormone involved in the stress response. It is released by the hypothalamus and stimulates the release of corticotropin by the anterior pituitary gland.","definition_xrefs":["PMID:7556876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"corticotropin-releasing hormone binding","secondary_identifiers":["GO:0017047"],"synonyms":[{"name":"CRF binding","type":"exact"},{"name":"CRH binding","type":"exact"},{"name":"corticoliberin binding","type":"exact"},{"name":"corticotropin-releasing factor binding","type":"exact"}],"termid":"GO:0051424"}


id: PBO:0086159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proteasome assembly during quiescence; binds to base of the proteasome regulartory particle; required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086159"}


id: PBO:0052145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP1 overlapping transcript 1","termid":"PBO:0052145"}


id: PR:P40901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asc-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative amino-acid permease isp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.09","secondary_identifiers":["UniProtKB:P40901"],"synonyms":[{"name":"Spom972h-SLC7A10","type":"exact"}],"termid":"PR:P40901"}


id: GO:0040008
data:
  {"annotated_genes":["SJAG_03705","SJAG_02169","SJAG_00216","SJAG_02723","SJAG_02838","SJAG_03581","SJAG_00244","SJAG_03486","SJAG_01456","SJAG_04322","SJAG_00514","SJAG_02392","SJAG_04724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90649,85963,91920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[95789,99547,106806,112521,102892,113914,84175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[102693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030307"},{"annotations":[111087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development.","definition_xrefs":["GOC:ems","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"growth","termid":"GO:0040007"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0040008","terms_by_termid":{"GO:0030307":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null}}


id: PBO:0067626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 798, pseudogene","termid":"PBO:0067626"}


id: GO:0043178
data:
  {"annotated_genes":["SJAG_02591","SJAG_03325","SJAG_03847","SJAG_00233","SJAG_03362","SJAG_04131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86697,97364,104740,99640,111830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000822"},{"annotations":[95582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"}]},"cv_name":"molecular_function","definition":"Binding to an alcohol, any of a class of alkyl compounds containing a hydroxyl group.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_02591":null,"SJAG_03325":null,"SJAG_03362":null,"SJAG_03847":null,"SJAG_04131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alcohol binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043178","terms_by_termid":{"GO:0000822":null,"GO:0030975":null}}


id: GO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, by which the anatomical structures of the ectodermal digestive tract are generated and organized.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic digestive tract morphogenesis","termid":"GO:0048557"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"embryonic ectodermal digestive tract development","termid":"GO:0048611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048613"}


id: PBO:0060114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 15","termid":"PBO:0060114"}


id: PBO:0055433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2863","termid":"PBO:0055433"}


id: GO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->3)- and (1->6)-linked alpha-D-mannose residues in the mannosyl-oligosaccharide Man(5)(GlcNAc)(3).","definition_xrefs":["EC:3.2.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity","secondary_identifiers":["Reactome:R-HSA-975814","RHEA:56052","MetaCyc:3.2.1.114-RXN"],"synonyms":[{"name":"1,3-(1,6-)mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"GlcNAc transferase I-dependent alpha1,3[alpha1,6]mannosidase activity","type":"related"},{"name":"Golgi alpha-mannosidase II","type":"related"},{"name":"ManII activity","type":"narrow"},{"name":"alpha-(1,3/6)-mannosidase activity","type":"related"},{"name":"alpha-D-mannosidase II","type":"related"},{"name":"alpha-mannosidase II","type":"related"},{"name":"exo-1,3-1,6-alpha-mannosidase activity","type":"related"},{"name":"mannosidase II activity","type":"narrow"},{"name":"mannosyl-oligosaccharide (1->3)-(1->6)-alpha-mannosidase activity","type":"exact"},{"name":"mannosyl-oligosaccharide (1->3,6)-alpha-mannosidase activity","type":"exact"},{"name":"mannosyl-oligosaccharide (1->3/6)-alpha-mannosidase activity","type":"exact"}],"termid":"GO:0004572"}


id: PBO:0038947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase 1 pseudogene 2","termid":"PBO:0038947"}


id: GO:0046203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine catabolic process","synonyms":[{"name":"spermidine breakdown","type":"exact"},{"name":"spermidine catabolism","type":"exact"},{"name":"spermidine degradation","type":"exact"}],"termid":"GO:0046203"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: FYPO:0004031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased UV-damage excision repair","synonyms":[{"name":"decreased UV-damage excision repair during mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during vegetative growth","type":"exact"},{"name":"decreased cyclobutane pyrimidine dimer repair","type":"narrow"},{"name":"decreased pyrimidine-pyrimidone 6-4 photoproduct repair","type":"narrow"},{"name":"reduced UV-damage excision repair","type":"exact"},{"name":"reduced removal of 6-4 photoproducts","type":"narrow"},{"name":"reduced removal of cyclobutane pyrimidine dimers","type":"narrow"}],"termid":"FYPO:0004031"}


id: PR:O74971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An autophagy protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13040:SF2","OMA:SCHPO03703","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.10c","secondary_identifiers":["UniProtKB:O74971"],"synonyms":[{"name":"Spom972h-ATG5","type":"exact"},{"name":"meiotically up-regulated gene 77 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74971"}


id: PBO:0081482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 362","termid":"PBO:0081482"}


id: GO:0010611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle hypertrophy","termid":"GO:0010611"}


id: GO:0019928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an aspartic acid residue to form 3-(S-L-cysteinyl)-L-aspartic acid.","definition_xrefs":["PMID:11717396","RESID:AA0314","PMID:11555656","PDB:1JJU"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid (obsolete GO:0019928)","termid":"GO:0019928"}


id: PBO:0090761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL family protein Orm1","termid":"PBO:0090761"}


id: PBO:0109102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3107","termid":"PBO:0109102"}


id: PBO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0030530"}


id: PBO:0088123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar integral membrane protein required for efflux of amino acids; required for efflux of amino acids during autophagic body breakdown in the vacuole; null mutation causes a gradual loss of viability during starvation","termid":"PBO:0088123"}


id: PBO:0082554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane","termid":"PBO:0082554"}


id: GO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization of a calyciferous axon which forms large synapses in the mammalian auditory central nervous system.","definition_xrefs":["PMID:11823805","NIF_Subcellular:sao1684283879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"calyx of Held","termid":"GO:0044305"}


id: MOD:00919
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-tyrosine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-tyrosine residue","synonyms":[{"name":"ModTyr","type":"exact"}],"termid":"MOD:00919"}


id: PR:C6Y4C3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein ecl3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.12c","synonyms":[{"name":"Spom972h-ecl3","type":"exact"}],"termid":"PR:C6Y4C3"}


id: _global:transcribed_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is transcribed_from Y if X is synthesized from template Y.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"_global:transcribed_from"}


id: PBO:0070104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 18 pseudogene","termid":"PBO:0070104"}


id: PBO:0082651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Psy3, Csm2, Shu2, and promotes error-free DNA repair, mediates inhibition of Srs2p function; essential for promoting the establishment of homolog bias during meiotic homologous recombination; promotes both crossover (CO) and non-crossover (NCO) pathways of meiotic recombination and formation of Rad51p filaments","termid":"PBO:0082651"}


id: GO:1901863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle tissue development.","definition_xrefs":["PMID:23150719","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"positively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle tissue development","synonyms":[{"name":"activation of muscle tissue development","type":"narrow"},{"name":"up regulation of muscle tissue development","type":"exact"},{"name":"up-regulation of muscle tissue development","type":"exact"},{"name":"upregulation of muscle tissue development","type":"exact"}],"termid":"GO:1901863"}


id: PBO:0079545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA6 divergent transcript","termid":"PBO:0079545"}


id: PBO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX importer","termid":"PBO:0090741"}


id: PBO:0005310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-B (predicted)","termid":"PBO:0005310"}


id: PBO:0069368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 628, pseudogene","termid":"PBO:0069368"}


id: PATO:0000763
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's being affected by loss of the ability to move a body part.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement behavioral quality","termid":"PATO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralysed","synonyms":[{"name":"palsy","type":"narrow"}],"termid":"PATO:0000763"}


id: GO:0004551
data:
  {"annotated_genes":["SJAG_03091","SJAG_00705"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107879],"is_not":false,"summary":null,"term":"GO:0004551"},{"annotations":[101148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000210"},{"annotations":[101149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035529"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides.","definition_xrefs":["PMID:4405504","PMID:2848456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00705":null,"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dinucleotide phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NUCLEOTIDE-PYROPHOSPHATASE-RXN","Reactome:R-HSA-196955"],"synonyms":[{"name":"dinucleotide nucleotidohydrolase activity","type":"related"},{"name":"nucleotide diphosphatase activity","type":"broad"},{"name":"nucleotide pyrophosphatase activity","type":"exact"}],"termid":"GO:0004551","terms_by_termid":{"GO:0000210":null,"GO:0004551":null,"GO:0035529":null}}


id: PBO:0058026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3976","termid":"PBO:0058026"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: PBO:0027564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiosis_II","termid":"PBO:0027564"}


id: PATO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal proportion around a central point or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial symmetry","termid":"PATO:0001325"}


id: PBO:0050129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 39","termid":"PBO:0050129"}


id: GO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of the N-terminal pyroglutamyl group from pGlu-His-Xaa tripeptides and pGlu-His-Xaa-Gly tetrapeptides.","definition_xrefs":["EC:3.4.19.6"],"gene_count":0,"genotype_count":0,"name":"obsolete pyroglutamyl-peptidase II activity (obsolete GO:0016921)","secondary_identifiers":["MetaCyc:3.4.19.6-RXN"],"synonyms":[{"name":"PAP-II activity","type":"related"},{"name":"TRH-DE activity","type":"narrow"},{"name":"TRH-degrading ectoenzyme activity","type":"narrow"},{"name":"TRH-specific aminopeptidase activity","type":"narrow"},{"name":"pyroglutamate aminopeptidase II","type":"related"},{"name":"pyroglutamyl aminopeptidase II activity","type":"related"},{"name":"pyroglutamyl peptidase II","type":"related"},{"name":"pyroglutamyl-peptidase II activity","type":"exact"},{"name":"thyroliberin-hydrolyzing pyroglutamate aminopeptidase activity","type":"related"},{"name":"thyroliberinase activity","type":"narrow"},{"name":"thyrotropin-releasing factor pyroglutamate aminopeptidase activity","type":"related"},{"name":"thyrotropin-releasing hormone degrading ectoenzyme activity","type":"narrow"},{"name":"thyrotropin-releasing hormone-degrading peptidase activity","type":"related"},{"name":"thyrotropin-releasing hormone-degrading pyroglutamate aminopeptidase activity","type":"related"}],"termid":"GO:0016921"}


id: GO:0032477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms.","definition_xrefs":["PMID:14519123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"homodimeric polyprenyl diphosphate synthase complex","synonyms":[{"name":"homodimeric decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032477"}


id: PBO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Puc1","termid":"PBO:0004621"}


id: PBO:0053763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1005","termid":"PBO:0053763"}


id: FYPO:0005499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a lower extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"decreased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"},{"name":"expression of CRE target genes decreased during cellular response to miconazole","type":"related"}],"termid":"FYPO:0005499"}


id: PBO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, shugoshin, Sgo1","termid":"PBO:0003409"}


id: PBO:0068053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 358","termid":"PBO:0068053"}


id: GO:0042804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with identical proteins to form a homooligomer.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein homooligomerization activity (obsolete GO:0042804)","synonyms":[{"name":"oligomerization activity","type":"broad"},{"name":"protein homooligomerization activity","type":"exact"}],"termid":"GO:0042804"}


id: GO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"flavin adenine dinucleotide catabolic process","synonyms":[{"name":"FAD or FADH2 catabolic process","type":"exact"},{"name":"flavin adenine dinucleotide breakdown","type":"exact"},{"name":"flavin adenine dinucleotide catabolism","type":"exact"},{"name":"flavin adenine dinucleotide degradation","type":"exact"}],"termid":"GO:0072389"}


id: PBO:0046187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 2","termid":"PBO:0046187"}


id: GO:1900554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"asperfuranone metabolic process","termid":"GO:1900552"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"asperfuranone biosynthetic process","synonyms":[{"name":"asperfuranone anabolism","type":"exact"},{"name":"asperfuranone biosynthesis","type":"exact"},{"name":"asperfuranone formation","type":"exact"},{"name":"asperfuranone synthesis","type":"exact"}],"termid":"GO:1900554"}


id: PBO:0081256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF25 divergent transcript","termid":"PBO:0081256"}


id: PBO:0043298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 17A","termid":"PBO:0043298"}


id: PBO:0039157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 4","termid":"PBO:0039157"}


id: PBO:0054973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2387","termid":"PBO:0054973"}


id: FYPO:0000046
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115203,115215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"},{"annotations":[115364,115239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000082"},{"annotations":[115390,115499,115374,115376,115375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000080"},{"annotations":[115568,115575,115579,115583,115407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001355"},{"annotations":[115616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cell population growth is decreased relative to normal. 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aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32243490":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYPO:0000222"],"single_locus_annotated_genes":["SJAG_00409","SJAG_05207","SJAG_00266","SJAG_04703","SJAG_03198","SJAG_00514","SJAG_04697","SJAG_01794","SJAG_03453","SJAG_02527","SJAG_02592","SJAG_01946","SJAG_04464"],"single_locus_genotype_uniquenames":["scd1delta","cmp7delta","scd2delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","for3delta","gpd1delta","atf1delta","oar2delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","ras1delta","sty1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","cem1delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression"],"synonyms":[{"name":"aerobic growth defects","type":"related"},{"name":"decreased aerobic cell population growth","type":"narrow"},{"name":"decreased growth","type":"broad"},{"name":"reduced aerobic cell population growth","type":"narrow"},{"name":"reduced cell population growth","type":"exact"},{"name":"slow aerobic cell population growth","type":"narrow"}],"termid":"FYPO:0000046","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000117":null,"FYECO:0000137":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0001355":null,"FYPO:0001408":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1901193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0044085","GO:0008150","GO:0065003","GO:0010467"],"is_obsolete":false,"name":"regulation of formation of translation preinitiation complex","synonyms":[{"name":"regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901193"}


id: PBO:0089542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, membrane-tethered Sre2","termid":"PBO:0089542"}


id: PBO:0083960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General splicing factor; required for stable U2 snRNP binding to primary transcripts; essential for the first step of splicing; component of the pre-catalytic spliceosome complex containing Cef1p; similar to S. pombe Cwf24p","termid":"PBO:0083960"}


id: MOD:01521
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}


id: PBO:0059229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L1","termid":"PBO:0059229"}


id: GO:1900673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving olefin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefin metabolic process","synonyms":[{"name":"olefin metabolism","type":"exact"}],"termid":"GO:1900673"}


id: PBO:0078419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-5","termid":"PBO:0078419"}


id: PBO:0082274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anchorage subunit of a-agglutinin of a-cells; highly O-glycosylated protein with N-terminal secretion signal and C-terminal signal for addition of GPI anchor to cell wall, linked to adhesion subunit Aga2p via two disulfide bonds; AGA1 has a paralog, FIG2, that arose from the whole genome duplication","termid":"PBO:0082274"}


id: GO:1990656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering process in which t-SNARES are localized to distinct domains in the cell membrane. t-SNAREs are cell surface proteins which are part of secretory microdomain assemblies.","definition_xrefs":["PMID:22528485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"t-SNARE clustering","termid":"GO:1990656"}


id: FYPO:0006605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"},{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","termid":"FYPO:0006437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000257","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006605"}


id: GO:0120031
data:
  {"annotated_genes":["SJAG_02379","SJAG_02864","SJAG_02700","SJAG_01894","SJAG_01943","SJAG_04509","SJAG_03453","SJAG_01794","SJAG_01993","SJAG_02989","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94360,84379,88579,94957,95035,110362],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[107403,85967,84014,86936,89546],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Formation of a prolongation or process extending and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eupodium","type":"narrow"}],"termid":"GO:0120031","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: PBO:0049434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 11","termid":"PBO:0049434"}


id: PBO:0058510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5700","termid":"PBO:0058510"}


id: PBO:0045935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1 pseudogene 2","termid":"PBO:0045935"}


id: PBO:0060108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 9","termid":"PBO:0060108"}


id: PR:Q9UTC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13303:SF0","PRO:DNx","OMA:SCHPO00201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: GO:0071708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin light chain V and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin V(D)J recombination","termid":"GO:0033152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"immunoglobulin light chain V-J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"broad"},{"name":"immunoglobulin V(D)J recombination","type":"broad"},{"name":"immunoglobulin V-J joining","type":"exact"}],"termid":"GO:0071708"}


id: GO:0033000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-gamma RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without additional signaling components. The complex functions primarily as an activating receptor for IgG.","definition_xrefs":["PMID:12413532","GOC:add","PMID:11244038","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Fc-gamma receptor I complex","synonyms":[{"name":"FcgRI complex","type":"exact"},{"name":"IgG receptor complex","type":"broad"},{"name":"immunoglobulin G receptor complex","type":"broad"}],"termid":"GO:0033000"}


id: GO:0032438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanosome organization","synonyms":[{"name":"melanosome organisation","type":"exact"},{"name":"melanosome organization and biogenesis","type":"related"}],"termid":"GO:0032438"}


id: FYPO:0004542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"increased gene silencing","termid":"FYPO:0000577"},{"relation_name":"is_a","term_name":"increased chromatin silencing","termid":"FYPO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0006367"],"synonyms":[{"name":"increased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at telomere","type":"related"}],"termid":"FYPO:0004542"}


id: PBO:0058106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4321","termid":"PBO:0058106"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: GO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-4 production","secondary_identifiers":["GO:0045402","GO:0150133"],"synonyms":[{"name":"regulation of IL-4 production","type":"exact"},{"name":"regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032673"}


id: PBO:0054423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1819","termid":"PBO:0054423"}


id: MOD:00413
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a cysteine residue with biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine.","definition_xrefs":["Unimod:20#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine derivatized cysteine","synonyms":[{"name":"Biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine","type":"related"},{"name":"PEO-Iodoacetyl-LC-Biotin","type":"related"}],"termid":"MOD:00413"}


id: GO:0018419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a protein structure comprising two or more rings that are interlocked but not covalently joined; resembling the links of a chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"protein catenane formation","termid":"GO:0018419"}


id: GO:0007492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoderm development","termid":"GO:0007492"}


id: PBO:0003723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase Fba1","termid":"PBO:0003723"}


id: PBO:0017520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD transmembrane transporter Yea6 (predicted)","termid":"PBO:0017520"}


id: GO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the left horn of the sinus venosus from its initial formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left horn of sinus venosus development","termid":"GO:0061079"}


id: GO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pullulan to panose (6-alpha-D-glucosylmaltose).","definition_xrefs":["EC:3.2.1.135","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"neopullulanase activity","secondary_identifiers":["MetaCyc:3.2.1.135-RXN"],"synonyms":[{"name":"pullulan 4-D-glucanohydrolase (panose-forming)","type":"related"},{"name":"pullulanase II activity","type":"exact"}],"termid":"GO:0031216"}


id: PBO:0060866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 9","termid":"PBO:0060866"}


id: PBO:0011956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_mutation","termid":"PBO:0011956"}


id: GO:0010883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid storage","synonyms":[{"name":"regulation of lipid sequestration","type":"narrow"}],"termid":"GO:0010883"}


id: PBO:0088042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); involved in postreplication repair as a heterodimer with Rad18p, regulation of K63 polyubiquitination in response to oxidative stress, DSBR and checkpoint control as a heterodimer with Bre1p, ubiquitin-mediated N-end rule protein degradation as a heterodimer with Ubr1p, ERAD with Ubr1p in the absence of canonical ER membrane ligases, and Rpn4p turnover as part of proteasome homeostasis, in complex with Ubr2p and Mub1p","termid":"PBO:0088042"}


id: PBO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex component Spt16","termid":"PBO:0004611"}


id: PATO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an earlier onset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predisplaced growth","synonyms":[{"name":"precocious growth","type":"exact"}],"termid":"PATO:0001754"}


id: PBO:0089546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body cell cycle signalling scaffold Cut12","termid":"PBO:0089546"}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: PR:Q7Z9I4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- osr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.06c","synonyms":[{"name":"Spom972h-osr1","type":"exact"}],"termid":"PR:Q7Z9I4"}


id: PBO:0046649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase A4","termid":"PBO:0046649"}


id: PBO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AZ member 1 pseudogene","termid":"PBO:0062227"}


id: PBO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 6","termid":"PBO:0048861"}


id: GO:1900866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycolate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycolate transport","termid":"GO:1900866"}


id: GO:0018511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2,3-dihydroxy-2,3-dihydro-p-cumate + NAD+ = 2,3-dihydroxy-p-cumate + H+ + NADH.","definition_xrefs":["RHEA:23772","EC:1.3.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0396","KEGG_REACTION:R05240","MetaCyc:RXN-665"],"synonyms":[{"name":"cis-2,3-dihydroxy-2,3-dihydro-p-cumate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018511"}


id: SO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The leftmost segment of homology in the HML and MAT mating loci, but not present in HMR.","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"W_region","secondary_identifiers":["SO:0002000"],"synonyms":[{"name":"W-region","type":"exact"}],"termid":"SO:0002024"}


id: PBO:0084198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone methyltransferase, subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3K4; Set1p-dependent H3K4 trimethylation recruits Nrd1p, allowing efficient termination of snoRNAs and cryptic unstable transcripts (CUTs) by Nrd1p-Nab3p-Sen1p pathway; modulates histone acetylation levels in promoter proximal regions to ensure efficient Nrd1p-dependent termination; required in transcriptional silencing near telomeres and at silent mating type loci; has a SET domain","termid":"PBO:0084198"}


id: GO:0036151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylcholine, through sequential deacylation and re-acylation reactions, to generate phosphatidylcholine containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:18458083","PMID:18195019","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine acyl-chain remodeling","synonyms":[{"name":"phosphatidylcholine acyl-chain remodelling","type":"exact"}],"termid":"GO:0036151"}


id: PBO:0059031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP20 antisense RNA 1","termid":"PBO:0059031"}


id: PBO:0028138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_large_ribosomal_subunit_level","termid":"PBO:0028138"}


id: GO:0051094
data:
  {"annotated_genes":["SJAG_04853","SJAG_03581","SJAG_04509","SJAG_01794","SJAG_01212","SJAG_02379","SJAG_02392","SJAG_03453","SJAG_02169","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90649,91920,85963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[98344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[84014,86936,107403,85967,89546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[104924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[86821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043938"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"positively_regulates","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01212":null,"SJAG_01794":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04509":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of developmental process","type":"narrow"},{"name":"stimulation of developmental process","type":"narrow"},{"name":"up regulation of developmental process","type":"exact"},{"name":"up-regulation of developmental process","type":"exact"},{"name":"upregulation of developmental process","type":"exact"}],"termid":"GO:0051094","terms_by_termid":{"GO:0043938":null,"GO:0051519":null,"GO:0075296":null,"GO:0090141":null,"GO:1902917":null,"GO:1903024":null}}


id: FYPO:0004054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to salt stress","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to salt stress","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during salt stress","type":"exact"},{"name":"nuclear exclusion during cellular response to salt stress","type":"related"},{"name":"nuclear protein exclusion during cellular response to salt stress","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004054"}


id: PBO:0058188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4481","termid":"PBO:0058188"}


id: GO:0019715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-aspartic acid to form peptidyl-L-erythro-beta-hydroxyaspartic acid; catalyzed by peptide-aspartate beta-dioxygenase (EC:1.14.11.16).","definition_xrefs":["RESID:AA0027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid hydroxylation","termid":"GO:0042264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid hydroxylation to form L-erythro-beta-hydroxyaspartic acid","termid":"GO:0019715"}


id: GO:0015012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating alpha-(1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues.","definition_xrefs":["RESID:AA0210","GOC:mah","ISBN:0198547684","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6558"],"synonyms":[{"name":"heparan sulfate proteoglycan anabolism","type":"exact"},{"name":"heparan sulfate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulfate proteoglycan formation","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process","type":"exact"},{"name":"heparin proteoglycan biosynthetic process","type":"related"}],"termid":"GO:0015012"}


id: GO:0050102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-beta-D-glucosyl(n) + phosphate = 1,4-beta-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate.","definition_xrefs":["MetaCyc:CELLODEXTRIN-PHOSPHORYLASE-RXN","EC:2.4.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cellodextrin phosphorylase activity","secondary_identifiers":["RHEA:23024"],"synonyms":[{"name":"1,4-beta-D-oligo-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,4-oligoglucan:orthophosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0050102"}


id: GO:0101021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estrogen + donor-H2 + O2 = 2-hydroxyestrogen + H2O.","definition_xrefs":["GOC:rl","PMID:14559847","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"estrogen 2-hydroxylase activity","synonyms":[{"name":"oestrogen 2-hydroxylase activity","type":"exact"}],"termid":"GO:0101021"}


id: GO:0019530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["GOC:jl","ISBN:0198600461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"taurine metabolic process","synonyms":[{"name":"taurine metabolism","type":"exact"}],"termid":"GO:0019530"}


id: GO:0061085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 methylation (obsolete GO:0061085)","termid":"GO:0061085"}


id: GO:0061866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of one or more phosphate groups to histone H3 on a serine residue at position 10.","definition_xrefs":["PMID:27521428"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-S10 phosphorylation (obsolete GO:0061866)","termid":"GO:0061866"}


id: PBO:0076720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohyalin","termid":"PBO:0076720"}


id: SO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert made from cDNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cDNA","termid":"SO:0000756"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_cDNA_insert","synonyms":[{"name":"cloned cDNA insert","type":"exact"}],"termid":"SO:0000913"}


id: PBO:0087528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4, an essential histone acetyltransferase complex; positions Piccolo NuA4 for efficient acetylation of histone H4 or histone H2A; relocalizes to the cytosol in response to hypoxia; similar to human tumor suppressor ING1 and its isoforms ING4 and ING5","termid":"PBO:0087528"}


id: PBO:0028585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cAMP_absent_from_cell","termid":"PBO:0028585"}


id: PBO:0055983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 1","termid":"PBO:0055983"}


id: GO:1904887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Wnt signalosome.","definition_xrefs":["GOC:PARL","GO_REF:0000079","PMID:22899650","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Wnt signalosome assembly","synonyms":[{"name":"LRP5/6 signalosome assembly","type":"exact"},{"name":"LRP5/6 signalosome formation","type":"exact"},{"name":"LRP6 signalosome assembly","type":"narrow"},{"name":"LRP6 signalosome formation","type":"narrow"},{"name":"Wnt signalosome complex assembly","type":"exact"},{"name":"Wnt signalosome complex formation","type":"exact"},{"name":"Wnt signalosome formation","type":"exact"},{"name":"Wnt-LRP5/6 signalosome assembly","type":"exact"},{"name":"Wnt-LRP5/6 signalosome formation","type":"exact"}],"termid":"GO:1904887"}


id: GO:0031626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-endorphin, a peptide generated by the cleavage of pro-opiomelanocortin.","definition_xrefs":["PMID:6267560","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"beta-endorphin binding","termid":"GO:0031626"}


id: MOD:01657
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form N6-Dabsyl-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Dabsyl derivatized lysine","synonyms":[{"name":"N6-[4-([4-(dimethylamino)phenyl]diazenyl)benzenesulfonyl]lysine","type":"exact"},{"name":"N6DabsylLys","type":"exact"}],"termid":"MOD:01657"}


id: GO:0009693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene metabolic process","termid":"GO:0009692"},{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene biosynthetic process","secondary_identifiers":["MetaCyc:ETHYL-PWY","GO:0042456"],"synonyms":[{"name":"ethene biosynthesis","type":"exact"},{"name":"ethene biosynthesis from L-methionine","type":"exact"},{"name":"ethene biosynthetic process","type":"exact"},{"name":"ethene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene anabolism","type":"exact"},{"name":"ethylene biosynthesis","type":"exact"},{"name":"ethylene biosynthesis from L-methionine","type":"exact"},{"name":"ethylene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene formation","type":"exact"},{"name":"ethylene synthesis","type":"exact"}],"termid":"GO:0009693"}


id: GO:0021658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 3 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:cls","GOC:curators","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 3 development","termid":"GO:0021569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}


