# terms

id: PBO:0030417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_plasmid_loss","termid":"PBO:0030417"}


id: PR:Q10191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein LTV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01197","PRO:DNx","PANTHER:PTHR21531:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein LTV1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.17","secondary_identifiers":["UniProtKB:Q10191"],"synonyms":[{"name":"Spom972h-LTV1","type":"exact"}],"termid":"PR:Q10191"}


id: PBO:0091624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein","termid":"PBO:0091624"}


id: PBO:0082122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; responsible for incorporation of N4-acetylcytidine into mRNAs; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance; essential gene; NAT10, the human homolog, implicated in several types of cancer and premature aging","termid":"PBO:0082122"}


id: FYPO:0001480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity","synonyms":[{"name":"normal neutral trehalase activity","type":"exact"},{"name":"normal trehalase activity","type":"broad"}],"termid":"FYPO:0001480"}


id: GO:1904185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PMID:15004232","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"equatorial microtubule organizing center assembly","synonyms":[{"name":"EMTOC assembly","type":"exact"},{"name":"EMTOC formation","type":"exact"},{"name":"equatorial microtubule organising centre assembly","type":"exact"},{"name":"equatorial microtubule organising centre formation","type":"exact"},{"name":"equatorial microtubule organizing center formation","type":"exact"}],"termid":"GO:1904185"}


id: GO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine nucleobase, an organic nitrogenous base with a pyrimidine skeleton.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase binding","termid":"GO:0002054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrimidine nucleobase binding","synonyms":[{"name":"1,3-diazine binding","type":"narrow"},{"name":"pyrimidine base binding","type":"exact"},{"name":"pyrimidine binding","type":"related"}],"termid":"GO:0002061"}


id: GO:0070613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing, a protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"regulation of protein processing","secondary_identifiers":["GO:0010953"],"synonyms":[{"name":"regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0070613"}


id: PBO:0056461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBL associated serine protease 1","termid":"PBO:0056461"}


id: PBO:0013051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fhl1","termid":"PBO:0013051"}


id: PBO:0080294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 58 pseudogene","termid":"PBO:0080294"}


id: PBO:0069490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 757, pseudogene","termid":"PBO:0069490"}


id: PBO:0029656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_premeiotic_DNA_replication","termid":"PBO:0029656"}


id: PBO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid24 family protein (predicted)","termid":"PBO:0002931"}


id: PBO:0084190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical subtypes (see also HTA2); DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p; N-terminally propionylated in vivo","termid":"PBO:0084190"}


id: PBO:0050978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 22","termid":"PBO:0050978"}


id: GO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in pronephric nephron development","synonyms":[{"name":"pronephros proximal/distal pattern formation","type":"exact"}],"termid":"GO:0072196"}


id: MOD:01179
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N,N-dimethyl-L-alanine.","definition_xrefs":["RESID:AA0433","PubMed:17691833","PubMed:387091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-alanine","synonyms":[{"name":"(S)-1-carboxy-N,N-dimethylaminoethane","type":"exact"},{"name":"(S)-2-(dimethylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylalanine","type":"exact"},{"name":"N,N-dimethyl-L-alanine","type":"exact"},{"name":"N,N-dimethylalanine","type":"exact"},{"name":"NMe2Ala","type":"exact"}],"termid":"MOD:01179"}


id: PBO:0111767
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PY motif","termid":"PBO:0111767"}


id: PR:O94401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicular integral-membrane protein VIP36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type lectin-like domain-containing protein C126.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.08c","secondary_identifiers":["UniProtKB:O94401"],"synonyms":[{"name":"Spom972h-LMAN2","type":"exact"}],"termid":"PR:O94401"}


id: PBO:0111786
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAT domain","termid":"PBO:0111786"}


id: PBO:0052336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2013","termid":"PBO:0052336"}


id: SO:1000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The replacement of a single amino acid by another.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000093 sequence_variant_causing_amino_acid_substitution (obsolete SO:1000093)","synonyms":[{"name":"mutation causing amino acid substitution","type":"related"},{"name":"sequence variant causing amino acid substitution","type":"exact"}],"termid":"SO:1000093"}


id: PBO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit G (predicted)","termid":"PBO:0000536"}


id: FYPO:0006455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis I","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006455"}


id: PBO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"below 100 amino acid size threshold","termid":"PBO:0000800"}


id: PBO:0051097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant mu","termid":"PBO:0051097"}


id: PBO:0084492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein essential for chromosome synapsis; involved in completion of nuclear divisions during meiosis; induced early in meiosis","termid":"PBO:0084492"}


id: GO:1901562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paraquat stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paraquat","termid":"GO:1901562"}


id: GO:1900046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemostasis","termid":"GO:1900046"}


id: GO:0000731
data:
  {"annotated_genes":["SJAG_02667","SJAG_00406","SJAG_02818","SJAG_04877","SJAG_04089","SJAG_05197","SJAG_04190","SJAG_03906","SJAG_16460","SJAG_02199","SJAG_00611","SJAG_00573","SJAG_00153","SJAG_04791","SJAG_00814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91130],"is_not":false,"summary":null,"term":"GO:0000731"},{"annotations":[98882,105156,100964,91308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904161"},{"annotations":[100278,98932,113341,95361,100038,98952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[100279,91950,95362,100039,109612,113342,98933,98953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[107801],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[94381,113343,100043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"Synthesis of DNA that proceeds from the broken 3' single-strand DNA end and uses the homologous intact duplex as the template.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA synthesis involved in DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA repair synthesis","type":"broad"},{"name":"DNA synthesis during DNA repair","type":"related"},{"name":"mitotic DNA repair synthesis","type":"narrow"}],"termid":"GO:0000731","terms_by_termid":{"GO:0000731":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904161":null,"GO:1904332":null}}


id: FYPO:0002387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at subtelomeres is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to telomere","termid":"FYPO:0003803"},{"relation_name":"is_a","term_name":"decreased protein localization to subtelomeric heterochromatin","termid":"FYPO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to telomeric heterochromatin during vegetative growth","type":"related"},{"name":"reduced protein localization to subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002387"}


id: GO:0015303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: galactose or glucose(out) = galactose or glucose(in).","definition_xrefs":["TC:2.A.1.1.6"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose, glucose uniporter activity (obsolete GO:0015303)","synonyms":[{"name":"galactose, glucose uniporter activity","type":"exact"}],"termid":"GO:0015303"}


id: GO:0075097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein gamma subunit (obsolete GO:0075097)","termid":"GO:0075097"}


id: PBO:0043539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 7","termid":"PBO:0043539"}


id: PBO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-globally_decreased_mitotic_recombination","termid":"PBO:0034649"}


id: GO:0034149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 5 signaling pathway","termid":"GO:0034147"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"positive regulation of TLR5 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034149"}


id: PBO:0083808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that promotes the first step of splicing; required for the final stages of spliceosome maturation and activation; interacts with Prp2p, which may release Spp2p from the spliceosome following the first cleavage reaction; stimulates Prp2p ATPase activity","termid":"PBO:0083808"}


id: GO:0055017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a cardiac muscle, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"cardiac muscle tissue development","termid":"GO:0048738"},{"relation_name":"part_of","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue growth","synonyms":[{"name":"heart muscle growth","type":"exact"}],"termid":"GO:0055017"}


id: PBO:0109033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MESD pseudogene 1","termid":"PBO:0109033"}


id: PBO:0068576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 27, pseudogene","termid":"PBO:0068576"}


id: PBO:0063889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P pseudogene 2","termid":"PBO:0063889"}


id: PBO:0081333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 133","termid":"PBO:0081333"}


id: PBO:0067734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 33","termid":"PBO:0067734"}


id: PBO:0039990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 4","termid":"PBO:0039990"}


id: PBO:0040905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 9","termid":"PBO:0040905"}


id: PBO:0056962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR22 host gene","termid":"PBO:0056962"}


id: PR:P36624
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorbitol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11695:SF38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.05c","secondary_identifiers":["UniProtKB:P36624"],"synonyms":[{"name":"L-iditol 2-dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1773.05c","type":"related"},{"name":"Spom972h-SORD","type":"exact"},{"name":"protein tms1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36624"}


id: GO:0021910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that results in the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GOC:tb","GOC:cls","GOC:dph","GOC:jid","PMID:11262869","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021910"}


id: PBO:0002792
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear elongation and deformation","termid":"PBO:0002792"}


id: PBO:0048383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 6","termid":"PBO:0048383"}


id: GO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction:(2E,6E,10E)-geranylgeranyl diphosphate + sn-glycerol 1-phosphate = diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate.","definition_xrefs":["PMID:17253090","RHEA:23404","PMID:8408023","PMID:12801917"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-3-O-geranylgeranylglyceryl phosphate synthase activity (obsolete GO:0043889)","synonyms":[{"name":"(S)-3-O-geranylgeranylglycerylphosphate synthase activity","type":"exact"},{"name":"(S)-GGGP synthase activity","type":"exact"},{"name":"GGGP synthase activity","type":"exact"},{"name":"GGGPS","type":"exact"}],"termid":"GO:0043889"}


id: GO:0036292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which interchain hydrogen bonds between two single-stranded DNA (ssDNA) are reformed to regenerate double-stranded DNA (dsDNA). ssDNA is often bound and stabilized by proteins such as replication protein A (RPA) to form ssDNA bubbles. The bubbles can be rewound by ATP-dependent motors to reform base pairs between strands and thus dsDNA.","definition_xrefs":["PMID:21078962","PMID:22704558","PMID:22705370","PMID:22759634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA geometric change","termid":"GO:0032392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA rewinding","synonyms":[{"name":"DNA annealing","type":"related"},{"name":"RPA-dependent DNA rewinding","type":"narrow"},{"name":"single-stranded DNA bubble rewinding","type":"narrow"}],"termid":"GO:0036292"}


id: GO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"}


id: PBO:0046445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythropoietin","termid":"PBO:0046445"}


id: PBO:0083681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication","termid":"PBO:0083681"}


id: GO:1903306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["PMID:12526776","GOC:TermGenie","GOC:pad","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"negatively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of regulated secretory pathway","synonyms":[{"name":"down regulation of regulated secretory pathway","type":"exact"},{"name":"down-regulation of regulated secretory pathway","type":"exact"},{"name":"downregulation of regulated secretory pathway","type":"exact"},{"name":"inhibition of regulated secretory pathway","type":"narrow"}],"termid":"GO:1903306"}


id: PBO:0067863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 165","termid":"PBO:0067863"}


id: PBO:0085805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; dgr1 null mutant is resistant to 2-deoxy-D-glucose","termid":"PBO:0085805"}


id: FYPO:0007248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is shorter than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PMID:9042863","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"},{"relation_name":"is_a","term_name":"decreased duration of mitotic G2 DNA damage checkpoint","termid":"FYPO:0004870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"advanced mitotic G2 DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"}],"termid":"FYPO:0007248"}


id: FYPO:0002095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"increased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to DNA damaging agent","type":"related"},{"name":"increased protein phosphorylation during response to DNA damage stimulus","type":"exact"}],"termid":"FYPO:0002095"}


id: GO:0010011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to auxin, a plant hormone that regulates aspects of plant growth.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"auxin binding","synonyms":[{"name":"auxin receptor","type":"narrow"}],"termid":"GO:0010011"}


id: GO:1901418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"positively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to ethanol","synonyms":[{"name":"activation of response to ethanol","type":"narrow"},{"name":"up regulation of response to ethanol","type":"exact"},{"name":"up-regulation of response to ethanol","type":"exact"},{"name":"upregulation of response to ethanol","type":"exact"}],"termid":"GO:1901418"}


id: PBO:0036069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_polymerization","termid":"PBO:0036069"}


id: PR:Q9HDZ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.05c gene.","definition_xrefs":["UniProtKB:Q9HDZ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0553 protein C589.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.05c","synonyms":[{"name":"Spom972h-SPAC589.05c","type":"exact"}],"termid":"PR:Q9HDZ9"}


id: GO:1990628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of RseA, RseB and RpoE. It form the inactive form of the sigma-E transcription factor. In response to stress, outer membrane proteins accumulate in the periplasm and activate cleavage of RseA periplasmic domain by DegS, triggering a proteolytic cascade that frees sigma-E to activate gene expression. RseB binding to RseA prevents activated DegS from cleaving RseA. Sigma-E-mediated envelope stress response is the major pathway to ensure homeostasis in the envelope compartment of the cell.","definition_xrefs":["PMID:20190044","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete Sigma-E factor negative regulation complex (obsolete GO:1990628)","synonyms":[{"name":"RseA-RseB-RpoE complex","type":"related"},{"name":"Sigma-E factor negative regulation complex","type":"exact"}],"termid":"GO:1990628"}


id: PBO:0071967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A6","termid":"PBO:0071967"}


id: PBO:0062580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 4","termid":"PBO:0062580"}


id: PR:P78921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit theta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit theta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.05c","secondary_identifiers":["UniProtKB:P78921"],"synonyms":[{"name":"CCT-theta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT8","type":"exact"},{"name":"TCP-1-theta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78921"}


id: GO:0021937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from Purkinje cells to granule cell precursors resulting in an increase in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","PMID:15157725","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"positive regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation","synonyms":[{"name":"Purkinje cell-granule cell precursor cell signalling involved in regulation of granule cell precursor cell proliferation","type":"exact"}],"termid":"GO:0021937"}


id: GO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine metabolic process","synonyms":[{"name":"dopamine metabolism","type":"exact"}],"termid":"GO:0042417"}


id: PBO:0062888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like transcriptional repressor 1","termid":"PBO:0062888"}


id: PBO:0060720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A8 pseudogene 1","termid":"PBO:0060720"}


id: PBO:0044690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDR1 divergent transcript","termid":"PBO:0044690"}


id: SO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to a repeating unit made of a D-ribose ring connected to a phosphate backbone.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA","termid":"SO:0000356"}


id: PBO:0059321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 6","termid":"PBO:0059321"}


id: GO:0010286
data:
  {"annotated_genes":["SJAG_03527","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100370,100262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of an organism in response to high temperatures.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thermotolerance","type":"related"}],"termid":"GO:0010286","terms_by_termid":{"GO:0070370":null}}


id: FYPO:0001665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is lower than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"decreased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"decreased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"decreased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"},{"name":"reduced cellular cAMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001665"}


id: GO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delta2-isopentenyl diphosphate + ADP = diphosphate + N6-(delta(2)-isopentenyl)adenosine 5'-diphosphate.","definition_xrefs":["MetaCyc:RXN-4305","EC:2.5.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP dimethylallyltransferase activity","secondary_identifiers":["KEGG_REACTION:R08051","EC:2.5.1.-"],"synonyms":[{"name":"2-isopentenyl-diphosphate:ADP 2-isopentenyltransferase activity","type":"exact"},{"name":"2-isopentenyl-diphosphate:ADP delta2-isopentenyltransferase activity","type":"exact"},{"name":"ADP isopentenyltransferase activity","type":"exact"},{"name":"dimethylallyl-diphosphate:ADP dimethylallyltransferase activity","type":"related"}],"termid":"GO:0052623"}


id: GO:0010455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate commitment","termid":"GO:0010455"}


id: FYPO:0006485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4)P2 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4-bisphosphate level","type":"exact"}],"termid":"FYPO:0006485"}


id: PBO:0017440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transcription_of","termid":"PBO:0017440"}


id: GO:0031798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 metabotropic glutamate receptor binding","synonyms":[{"name":"type 1 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031798"}


id: GO:0009070
data:
  {"annotated_genes":["SJAG_01880","SJAG_02972","SJAG_00881","SJAG_04964","SJAG_02450","SJAG_03914","SJAG_01766","SJAG_04449","SJAG_02313","SJAG_02791","SJAG_04305","SJAG_00283","SJAG_03152","SJAG_00582"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[105506,97943,106550,91569,92962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[90275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[90557,87376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[108008,102026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[106551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[112943,106187,96316,88288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00582":null,"SJAG_00881":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null,"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid anabolism","type":"exact"},{"name":"serine family amino acid biosynthesis","type":"exact"},{"name":"serine family amino acid formation","type":"exact"},{"name":"serine family amino acid synthesis","type":"exact"}],"termid":"GO:0009070","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006564":null,"GO:0009090":null,"GO:0019264":null,"GO:0019344":null,"GO:0071269":null}}


id: FYPO:0006290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle and during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to hydroxyurea","termid":"FYPO:0002099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during mitotic S phase during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during S phase during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006290"}


id: PBO:0028270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028270"}


id: GO:0016683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors (obsolete GO:0016683)","synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"exact"}],"termid":"GO:0016683"}


id: PBO:0073508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 3A","termid":"PBO:0073508"}


id: PBO:0084937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mu3-like subunit of the clathrin associated protein complex (AP-3); functions in transport of alkaline phosphatase to the vacuole via the alternate pathway","termid":"PBO:0084937"}


id: GO:1901670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of superoxide dismutase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of superoxide dismutase activity","termid":"GO:1901668"},{"relation_name":"is_a","term_name":"negative regulation of removal of superoxide radicals","termid":"GO:1904832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0098754"},{"rel_name":"regulates","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"negative regulation of superoxide dismutase activity","synonyms":[{"name":"inhibition of SOD-3","type":"related"},{"name":"inhibition of SOD-4","type":"related"},{"name":"inhibition of SODF","type":"related"},{"name":"inhibition of SODS","type":"related"},{"name":"down regulation of Cu,Zn-SOD","type":"related"},{"name":"down regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"down regulation of Fe-SOD","type":"related"},{"name":"down regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"down regulation of Mn-SOD","type":"related"},{"name":"down regulation of SOD","type":"related"},{"name":"down regulation of SOD-1","type":"related"},{"name":"down regulation of SOD-2","type":"related"},{"name":"down regulation of SOD-3","type":"related"},{"name":"down regulation of SOD-4","type":"related"},{"name":"down regulation of SODF","type":"related"},{"name":"down regulation of SODS","type":"related"},{"name":"down regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"down regulation of cuprein","type":"related"},{"name":"down regulation of cytocuprein","type":"related"},{"name":"down regulation of erythrocuprein","type":"related"},{"name":"down regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"down regulation of hemocuprein","type":"related"},{"name":"down regulation of hepatocuprein","type":"related"},{"name":"down regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"down regulation of iron superoxide oxidoreductase","type":"related"},{"name":"down regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"down regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"down regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"down regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"down regulation of superoxide dismutase I","type":"related"},{"name":"down regulation of superoxide dismutase II","type":"related"},{"name":"down regulation of superoxide dismutase activity","type":"exact"},{"name":"down regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"down regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"down-regulation of Cu,Zn-SOD","type":"related"},{"name":"down-regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"down-regulation of Fe-SOD","type":"related"},{"name":"down-regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"down-regulation of Mn-SOD","type":"related"},{"name":"down-regulation of SOD","type":"related"},{"name":"down-regulation of SOD-1","type":"related"},{"name":"down-regulation of SOD-2","type":"related"},{"name":"down-regulation of SOD-3","type":"related"},{"name":"down-regulation of SOD-4","type":"related"},{"name":"down-regulation of SODF","type":"related"},{"name":"down-regulation of SODS","type":"related"},{"name":"down-regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"down-regulation of cuprein","type":"related"},{"name":"down-regulation of cytocuprein","type":"related"},{"name":"down-regulation of erythrocuprein","type":"related"},{"name":"down-regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"down-regulation of hemocuprein","type":"related"},{"name":"down-regulation of hepatocuprein","type":"related"},{"name":"down-regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"down-regulation of iron superoxide oxidoreductase","type":"related"},{"name":"down-regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"down-regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"down-regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"down-regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"down-regulation of superoxide dismutase I","type":"related"},{"name":"down-regulation of superoxide dismutase II","type":"related"},{"name":"down-regulation of superoxide dismutase activity","type":"exact"},{"name":"down-regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"down-regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"downregulation of Cu,Zn-SOD","type":"related"},{"name":"downregulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"downregulation of Fe-SOD","type":"related"},{"name":"downregulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"downregulation of Mn-SOD","type":"related"},{"name":"downregulation of SOD","type":"related"},{"name":"downregulation of SOD-1","type":"related"},{"name":"downregulation of SOD-2","type":"related"},{"name":"downregulation of SOD-3","type":"related"},{"name":"downregulation of SOD-4","type":"related"},{"name":"downregulation of SODF","type":"related"},{"name":"downregulation of SODS","type":"related"},{"name":"downregulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"downregulation of cuprein","type":"related"},{"name":"downregulation of cytocuprein","type":"related"},{"name":"downregulation of erythrocuprein","type":"related"},{"name":"downregulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"downregulation of hemocuprein","type":"related"},{"name":"downregulation of hepatocuprein","type":"related"},{"name":"downregulation of iron superoxide dismutase activity","type":"narrow"},{"name":"downregulation of iron superoxide oxidoreductase","type":"related"},{"name":"downregulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"downregulation of manganese superoxide oxidoreductase","type":"related"},{"name":"downregulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"downregulation of nickel superoxide oxidoreductase","type":"related"},{"name":"downregulation of superoxide dismutase I","type":"related"},{"name":"downregulation of superoxide dismutase II","type":"related"},{"name":"downregulation of superoxide dismutase activity","type":"exact"},{"name":"downregulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"downregulation of zinc superoxide oxidoreductase","type":"related"},{"name":"inhibition of Cu,Zn-SOD","type":"related"},{"name":"inhibition of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"inhibition of Fe-SOD","type":"related"},{"name":"inhibition of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"inhibition of Mn-SOD","type":"related"},{"name":"inhibition of SOD","type":"related"},{"name":"inhibition of SOD-1","type":"related"},{"name":"inhibition of SOD-2","type":"related"},{"name":"inhibition of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"inhibition of cuprein","type":"related"},{"name":"inhibition of cytocuprein","type":"related"},{"name":"inhibition of erythrocuprein","type":"related"},{"name":"inhibition of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"inhibition of hemocuprein","type":"related"},{"name":"inhibition of hepatocuprein","type":"related"},{"name":"inhibition of iron superoxide dismutase activity","type":"narrow"},{"name":"inhibition of iron superoxide oxidoreductase","type":"related"},{"name":"inhibition of manganese superoxide dismutase activity","type":"narrow"},{"name":"inhibition of manganese superoxide oxidoreductase","type":"related"},{"name":"inhibition of nickel superoxide dismutase activity","type":"narrow"},{"name":"inhibition of nickel superoxide oxidoreductase","type":"related"},{"name":"inhibition of superoxide dismutase I","type":"related"},{"name":"inhibition of superoxide dismutase II","type":"related"},{"name":"inhibition of superoxide dismutase activity","type":"narrow"},{"name":"inhibition of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"inhibition of zinc superoxide oxidoreductase","type":"related"},{"name":"negative regulation of Cu,Zn-SOD","type":"related"},{"name":"negative regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"negative regulation of Fe-SOD","type":"related"},{"name":"negative regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"negative regulation of Mn-SOD","type":"related"},{"name":"negative regulation of SOD","type":"related"},{"name":"negative regulation of SOD-1","type":"related"},{"name":"negative regulation of SOD-2","type":"related"},{"name":"negative regulation of SOD-3","type":"related"},{"name":"negative regulation of SOD-4","type":"related"},{"name":"negative regulation of SODF","type":"related"},{"name":"negative regulation of SODS","type":"related"},{"name":"negative regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"negative regulation of cuprein","type":"related"},{"name":"negative regulation of cytocuprein","type":"related"},{"name":"negative regulation of erythrocuprein","type":"related"},{"name":"negative regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"negative regulation of hemocuprein","type":"related"},{"name":"negative regulation of hepatocuprein","type":"related"},{"name":"negative regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"negative regulation of iron superoxide oxidoreductase","type":"related"},{"name":"negative regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"negative regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"negative regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"negative regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"negative regulation of superoxide dismutase I","type":"related"},{"name":"negative regulation of superoxide dismutase II","type":"related"},{"name":"negative regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of zinc superoxide oxidoreductase","type":"related"}],"termid":"GO:1901670"}


id: PBO:0083863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty acid elongase, involved in sphingolipid biosynthesis; acts on fatty acids of up to 24 carbons in length; mutations have regulatory effects on 1,3-beta-glucan synthase, vacuolar ATPase, and the secretory pathway; ELO2 has a paralog, ELO1, that arose from the whole genome duplication; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083863"}


id: PBO:0072608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 3","termid":"PBO:0072608"}


id: GO:0003711
data:
  {"annotated_genes":["SJAG_02691","SJAG_02238","SJAG_03211","SJAG_00483","SJAG_04353","SJAG_02097","SJAG_00540","SJAG_03481","SJAG_01707","SJAG_02209","SJAG_02393"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88049,88708,90022,95979,101546,102202,102864,103938,109231,110115,113945],"is_not":false,"summary":null,"term":"GO:0003711"}]},"cv_name":"molecular_function","definition":"A molecular function that stimulates the elongation properties of the RNA polymerase during the elongation phase of transcription. A subclass of transcription elongation factors enable the transition from transcription initiation to elongation, while another class rescue stalled RNA polymerases.","definition_xrefs":["GOC:txnOH-2018","PMID:28892040","PMID:23878398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00483":null,"SJAG_00540":null,"SJAG_01707":null,"SJAG_02097":null,"SJAG_02209":null,"SJAG_02238":null,"SJAG_02393":null,"SJAG_02691":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_04353":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"transcription elongation factor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"transcription elongation regulator activity","type":"related"},{"name":"transcriptional elongation regulator activity","type":"related"}],"termid":"GO:0003711","terms_by_termid":{"GO:0003711":null}}


id: SO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together transcript regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_fusion","synonyms":[{"name":"transcript fusion","type":"exact"}],"termid":"SO:0001886"}


id: GO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Replication of circular DNA following excision from the chromosome; replication of extrachromosomal circular DNA generally occurs independently of chromosomal replication.","definition_xrefs":["PMID:33867825","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"replication of extrachromosomal circular DNA","termid":"GO:0001326"}


id: GO:0051285
data:
  {"annotated_genes":["SJAG_03705","SJAG_03379","SJAG_01118","SJAG_00104","SJAG_02379","SJAG_04776","SJAG_04703","SJAG_00030","SJAG_02169","SJAG_02838","SJAG_02166","SJAG_04982","SJAG_02045","SJAG_00851","SJAG_03637","SJAG_01453","SJAG_00700","SJAG_00397","SJAG_03486","SJAG_00268","SJAG_04724","SJAG_01964","SJAG_01448","SJAG_02392","SJAG_03581","SJAG_01925","SJAG_04666","SJAG_02695","SJAG_00805","SJAG_01855","SJAG_01738","SJAG_04620","SJAG_03655","SJAG_01196","SJAG_05285","SJAG_00216","SJAG_04690","SJAG_00661","SJAG_01167","SJAG_03625","SJAG_04771","SJAG_03748","SJAG_00140","SJAG_03126","SJAG_04509","SJAG_01360","SJAG_02320","SJAG_03011","SJAG_01268","SJAG_02222","SJAG_00845","SJAG_01787","SJAG_02087","SJAG_04781","SJAG_04322","SJAG_02989","SJAG_01456","SJAG_03453","SJAG_00800","SJAG_01114","SJAG_02241","SJAG_00514","SJAG_04901","SJAG_02368","SJAG_04765","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83628,83645,83995,84173,84268,84579,85434,85950,86830,86853,86923,87145,87448,87971,89625,89927,90639,91271,91433,91484,91912,92335,92371,92930,93040,93789,94890,95030,95785,95940,96219,96977,98687,98706,99018,99302,99543,99751,99798,100678,102128,102887,103050,103075,104377,106145,106797,106902,107395,107691,107905,108340,109088,109119,110074,110189,112211,112515,113908,114632],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[90640,102129,110190,85951,93271,107985,112212,86803,83996,114824,113909,109089,88478,112516,111844,86831,114633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902716"},{"annotations":[96978,113910,107986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane at the cell tip. The cell tip is the region at either end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00104":null,"SJAG_00140":null,"SJAG_00216":null,"SJAG_00268":null,"SJAG_00397":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_00700":null,"SJAG_00800":null,"SJAG_00805":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_01114":null,"SJAG_01118":null,"SJAG_01167":null,"SJAG_01196":null,"SJAG_01268":null,"SJAG_01360":null,"SJAG_01448":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01738":null,"SJAG_01787":null,"SJAG_01855":null,"SJAG_01925":null,"SJAG_01964":null,"SJAG_02045":null,"SJAG_02087":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02695":null,"SJAG_02838":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03126":null,"SJAG_03379":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_04001":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04620":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"cell cortex of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cortex of cell end","type":"exact"}],"termid":"GO:0051285","terms_by_termid":{"GO:0051285":null,"GO:0140472":null,"GO:1902716":null}}


id: GO:0012509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances within the Golgi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"},{"relation_name":"part_of","term_name":"COPI-coated inter-Golgi transport vesicle","termid":"GO:0030143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"inter-Golgi transport vesicle membrane","synonyms":[{"name":"inter-Golgi transport constitutive secretory pathway transport vesicle membrane","type":"exact"}],"termid":"GO:0012509"}


id: PBO:0108672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK/PAR-1 kinase Kin1","termid":"PBO:0108672"}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: PBO:0065047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 1","termid":"PBO:0065047"}


id: PBO:0006333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYK family kinase of unknown specificity (predicted)","termid":"PBO:0006333"}


id: PBO:0067234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 305, pseudogene","termid":"PBO:0067234"}


id: PBO:0078957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 1-1","termid":"PBO:0078957"}


id: PR:Q09818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mot2 gene.","definition_xrefs":["UniProtKB:Q09818","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription C16C9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.04c","synonyms":[{"name":"Spom972h-mot2","type":"exact"}],"termid":"PR:Q09818"}


id: PBO:0040880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 5","termid":"PBO:0040880"}


id: PBO:0051246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-74-1 (pseudogene)","termid":"PBO:0051246"}


id: GO:0052386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification in which the cell wall is reinforced and made thicker.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall thickening","termid":"GO:0052386"}


id: PBO:0041167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 3","termid":"PBO:0041167"}


id: PBO:0082204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the first alpha-1,2-linked mannose to form the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082204"}


id: GO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052225)","synonyms":[{"name":"energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052225"}


id: GO:0140713
data:
  {"annotated_genes":["SJAG_02035","SJAG_02348","SJAG_04670","SJAG_04547","SJAG_02416","SJAG_02906","SJAG_04272","SJAG_00914","SJAG_00925","SJAG_03867","SJAG_04257","SJAG_01005","SJAG_00259","SJAG_04038","SJAG_00913","SJAG_04561","SJAG_02798","SJAG_02314","SJAG_02698","SJAG_03366","SJAG_04692","SJAG_03128","SJAG_02571","SJAG_02439","SJAG_02198","SJAG_00170","SJAG_00942","SJAG_04758","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84940,86172,90689,91391,98964,105715,107221,109656,113975],"is_not":false,"summary":null,"term":"GO:0140713"},{"annotations":[84104,94310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[92521,99623,90686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[109132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[107314,94218,109655,109654,104151,112941,107313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[88452,108849,113974,103781,104823,90898,91146,111121,91525,99624,104828,106272,110584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome. The histone can be newly synthesized or result from nucleosome disassembly (either spontaneously, or by a histone chaperone).","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_01005":null,"SJAG_02035":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140597","GO:0140104","GO:0003674"],"is_obsolete":false,"name":"histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822185"],"synonyms":[{"name":"histone carrier activity","type":"exact"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140713","terms_by_termid":{"GO:0000510":null,"GO:0000511":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: FYPO:0006522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after arrest at the mitotic G2/M phase transition of the mitotic cell cycle.","definition_xrefs":["PMID:11598020","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"decreased viability following cell cycle arrest in mitotic G2 phase","type":"exact"},{"name":"loss of cell population viability following cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"loss of viability following mitotic G2/M arrest","type":"exact"},{"name":"loss of viability of mitotic G2-arrested cells","type":"related"},{"name":"reduced viability following cell cycle arrest at mitotic G2/M phase transition","type":"related"}],"termid":"FYPO:0006522"}


id: PATO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a by virtue of the bearer's exhibiting a consistently sized and approximately round cross-section along its length, which is many times larger than its diameter.","definition_xrefs":["PATOC:DC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcylindrical","termid":"PATO:0002226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fiber shaped","termid":"PATO:0002309"}


id: FYPO:0001195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased galactomannan level","synonyms":[{"name":"decreased cellular galactomannan level","type":"exact"},{"name":"decreased galactomannan accumulation","type":"related"},{"name":"decreased galactomannan level during mitotic cell cycle","type":"related"},{"name":"decreased galactomannan level during vegetative growth","type":"exact"},{"name":"reduced galactomannan level","type":"exact"}],"termid":"FYPO:0001195"}


id: PBO:0041481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 87","termid":"PBO:0041481"}


id: FYPO:0006242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication forks stall at a lower frequency in mutant cells than in wild type during a cellular response to DNA damage.","definition_xrefs":["PMID:28806726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased replication fork stalling during cellular response to DNA damage","synonyms":[{"name":"decreased frequency of replication fork stalling during cellular response to DNA damage","type":"exact"},{"name":"decreased replication fork stalling during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased replication fork stalling during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced replication fork stalling during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0006242"}


id: PBO:0072426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28","termid":"PBO:0072426"}


id: MOD:01124
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldohexosyl lysyl","termid":"MOD:01124"}


id: GO:0140813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: urate(out) + anion (in) = urate (in) + anion (out).","definition_xrefs":["PMID:12024214","PMID:18411268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"urate:monoatomic anion antiporter activity","synonyms":[{"name":"urate:anion antiporter activity","type":"broad"},{"name":"urate:organic anion antiporter activity","type":"narrow"}],"termid":"GO:0140813"}


id: PBO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor C","termid":"PBO:0080190"}


id: MOD:00756
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 4-hydroxy-D-valine.","definition_xrefs":["RESID:AA0388","PubMed:15853325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-D-valine","synonyms":[{"name":"(2R,3Xi)-2-amino-4-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"4-hydroxy-D-valine","type":"exact"},{"name":"D-4HyVal","type":"exact"},{"name":"D-gamma-hydroxyvaline","type":"exact"},{"name":"MOD_RES D-4-hydroxyvaline","type":"exact"}],"termid":"MOD:00756"}


id: PBO:0045331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 8","termid":"PBO:0045331"}


id: GO:0050433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of catecholamines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of catecholamine secretion","termid":"GO:0050433"}


id: PBO:0045384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase like 6","termid":"PBO:0045384"}


id: PBO:0057123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 206","termid":"PBO:0057123"}


id: PBO:0078560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 48","termid":"PBO:0078560"}


id: GO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups to histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation at centromere (obsolete GO:0031067)","synonyms":[{"name":"down regulation of histone deacetylation at centromere","type":"exact"},{"name":"down-regulation of histone deacetylation at centromere","type":"exact"},{"name":"downregulation of histone deacetylation at centromere","type":"exact"},{"name":"inhibition of histone deacetylation at centromere","type":"narrow"}],"termid":"GO:0031067"}


id: GO:0006860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed extracellular movement of amino acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular transport","termid":"GO:0006858"},{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"extracellular amino acid transport","termid":"GO:0006860"}


id: PBO:0013131
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PUS1","termid":"PBO:0013131"}


id: PBO:0074518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A10","termid":"PBO:0074518"}


id: GO:0004558
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97648,97649],"is_not":false,"summary":null,"term":"GO:0004558"},{"annotations":[97653,97652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032450"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->4)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["EC:3.2.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"alpha-1,4-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016982","Reactome:R-HSA-189053","Reactome:R-HSA-5659861","Reactome:R-HSA-5659922","Reactome:R-HSA-191116","GO:0004562","Reactome:R-HSA-191101","Reactome:R-HSA-5659899","Reactome:R-HSA-191108","Reactome:R-HSA-5659879","Reactome:R-HSA-189102","MetaCyc:MALTODEXGLUCOSID-RXN"],"synonyms":[{"name":"acid maltase activity","type":"related"},{"name":"alpha-D-glucosidase activity","type":"related"},{"name":"alpha-D-glucoside glucohydrolase activity","type":"related"},{"name":"alpha-glucopyranosidase activity","type":"related"},{"name":"alpha-glucosidase II","type":"related"},{"name":"alpha-glucoside hydrolase activity","type":"related"},{"name":"glucoinvertase activity","type":"related"},{"name":"glucosidoinvertase activity","type":"related"},{"name":"glucosidosucrase activity","type":"related"},{"name":"lysosomal alpha-glucosidase activity","type":"broad"},{"name":"maltase-glucoamylase activity","type":"related"}],"termid":"GO:0004558","terms_by_termid":{"GO:0004558":null,"GO:0032450":null}}


id: FYPO:0004630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"decreased transcript level during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004630"}


id: GO:0090180
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85146,109729],"is_not":false,"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of thiamine biosynthetic process","termid":"GO:0070623"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of thiamin biosynthetic process","type":"exact"}],"termid":"GO:0090180","terms_by_termid":{"GO:0090180":null}}


id: PBO:0036371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl7, DIPSY family","termid":"PBO:0036371"}


id: PBO:0059476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin like","termid":"PBO:0059476"}


id: GO:0008868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactitol-1-phosphate + NAD+ = D-tagatose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"galactitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.251-RXN","RHEA:15137"],"synonyms":[{"name":"galactitol-1-phosphate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008868"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111617],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: GO:0098723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myofibril of a skeletal muscle fiber.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"skeletal muscle myofibril","termid":"GO:0098723"}


id: GO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurine + 2-oxoglutarate = sulfoacetaldehyde + L-glutamate.","definition_xrefs":["PMID:16535664","RHEA:16353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"taurine-2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:RXN-2301","EC:2.6.1.55"],"synonyms":[{"name":"taurine aminotransferase activity","type":"exact"},{"name":"taurine transaminase activity","type":"exact"},{"name":"taurine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"taurine--glutamate transaminase activity","type":"related"},{"name":"taurine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0050322"}


id: GO:0014037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell differentiation","termid":"GO:0014037"}


id: PBO:0054002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1327","termid":"PBO:0054002"}


id: PBO:0088834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly NADPH-ferredoxin reductase Arh1","termid":"PBO:0088834"}


id: PBO:0065103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2A antisense RNA 1","termid":"PBO:0065103"}


id: PBO:0002836
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by salt stress","termid":"PBO:0002836"}


id: GO:0044674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric complex consisting of three polypeptides in an alpha2beta2gamma2 arrangement. Involved in the reduction of the coenzyme M-bound methyl group to methane, which is the final step in methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:9367957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methyl coenzyme M reductase complex","termid":"GO:0044674"}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: GO:1903748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["GO_REF:0000058","PMID:16857185","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"down regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"down regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"down regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"inhibition of establishment of protein localisation to mitochondrion","type":"narrow"},{"name":"inhibition of establishment of protein localization in mitochondrion","type":"narrow"},{"name":"inhibition of establishment of protein localization to mitochondrion","type":"narrow"},{"name":"negative regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"negative regulation of establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:1903748"}


id: GO:0120249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lateral wall of an outer hair cell (OHC) is a unique trilaminate composite consisting of the plasma membrane, an underlying cytoskeletal network containing an actin-spectrin cortical lattice, and an adjacent system of circumferential lamellar organelles known as the subsurface cisternae.","definition_xrefs":["GOC:krc","PMID:31920560","PMID:9412485","PMID:26352669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral wall of outer hair cell","synonyms":[{"name":"OHC lateral wall","type":"related"},{"name":"lateral wall of OHC","type":"related"},{"name":"outer hair cell lateral wall","type":"exact"}],"termid":"GO:0120249"}


id: PBO:0084334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein; tracks plus-ends and stabilizes microtubules; required for mitotic spindle assembly, chromosome segregation, and 2 micron plasmid partitioning; functionally redundant with Cin8p for chromosomal but not plasmid functions","termid":"PBO:0084334"}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: PBO:0081169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 1","termid":"PBO:0081169"}


id: PBO:0013792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-L/borderline left","termid":"PBO:0013792"}


id: FYPO:0004991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during meiotic cell cycle","synonyms":[{"name":"decreased protein accumulation during meiotic cell cycle","type":"related"},{"name":"reduced protein level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004991"}


id: PBO:0089270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane i-AAA protease complex subunit Yme1","termid":"PBO:0089270"}


id: GO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"olfactory learning","termid":"GO:0008355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olfactory learning","termid":"GO:0090328"}


id: GO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0019910"}


id: GO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells.","definition_xrefs":["GOC:dph","PMID:21508411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell homeostasis","termid":"GO:0061484"}


id: GO:0070144
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103259],"is_not":false,"summary":null,"term":"GO:0070144"}]},"cv_name":"biological_process","definition":"The process of coupling arginine to arginyl-tRNA in a mitochondrion, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginyl-tRNA aminoacylation","termid":"GO:0006420"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0010467","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial arginyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070144","terms_by_termid":{"GO:0070144":null}}


id: PR:Q9USZ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor G, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23115:SF13","OMA:SCHPO02754","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor G, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1306.01c","secondary_identifiers":["UniProtKB:Q9USZ1"],"synonyms":[{"name":"EF-Gmt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GFM1","type":"exact"},{"name":"elongation factor G 1, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"elongation factor G1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mEF-G 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ1"}


id: PBO:0063212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionyl-CoA carboxylase subunit alpha","termid":"PBO:0063212"}


id: PBO:0043495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 4","termid":"PBO:0043495"}


id: GO:0052654
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106483],"is_not":false,"summary":null,"term":"GO:0052654"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamatic acid.","definition_xrefs":["EC:2.6.1.42","MetaCyc:BRANCHED-CHAINAMINOTRANSFERLEU-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"L-leucine transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01090"],"synonyms":[{"name":"L-leucine aminotransferase activity","type":"exact"}],"termid":"GO:0052654","terms_by_termid":{"GO:0052654":null}}


id: PBO:0049461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 1","termid":"PBO:0049461"}


id: GO:0042653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The mitochondrial membrane segment of respiratory chain complex I. Respiratory chain complex I is an enzyme of the respiratory chain, consisting of at least 34 polypeptide chains. The electrons of NADH enter the chain at this complex. The complete complex is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix.","definition_xrefs":["ISBN:0716749556","GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"part_of","term_name":"mitochondrial respiratory chain complex I","termid":"GO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I, membrane segment","synonyms":[{"name":"NADH-Q oxidoreductase complex, membrane segment","type":"broad"}],"termid":"GO:0042653"}


id: PBO:0079318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 9A","termid":"PBO:0079318"}


id: GO:0005859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament of myosin found in a muscle cell of any type.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin II complex","termid":"GO:0016460"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"muscle myosin complex","termid":"GO:0005859"}


id: GO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRKC receptor activity (obsolete GO:0005016)","synonyms":[{"name":"neurotrophin TRKC receptor activity","type":"exact"}],"termid":"GO:0005016"}


id: PBO:0005497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major transcript in 972 h- is non functional as it contains a stop codon","termid":"PBO:0005497"}


id: PBO:0043295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 12 member B","termid":"PBO:0043295"}


id: PBO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2453","termid":"PBO:0055038"}


id: GO:0003353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cilium movement","termid":"GO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium movement","secondary_identifiers":["GO:1900174"],"synonyms":[{"name":"positive regulation of flagellar movement","type":"related"},{"name":"positive regulation of flagellum movement","type":"related"},{"name":"positive regulation of microtubule-based flagellum movement","type":"exact"}],"termid":"GO:0003353"}


id: PBO:0076189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 4","termid":"PBO:0076189"}


id: GO:0008342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in an insect larva.","definition_xrefs":["GOC:mah","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete larval feeding behavior (sensu Insecta) (obsolete GO:0008342)","synonyms":[{"name":"larval feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0008342"}


id: GO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arabinose, a pentose monosaccharide that occurs in both D and L configurations, and as a polymer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}


id: PBO:0043998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone like 1","termid":"PBO:0043998"}


id: GO:1904361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spore germination.","definition_xrefs":["PMID:8798577","PMID:14718564","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"positively_regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spore germination","secondary_identifiers":["GO:0075007"],"synonyms":[{"name":"activation of spore germination","type":"narrow"},{"name":"positive regulation of spore germination on or near host","type":"narrow"},{"name":"up regulation of spore germination","type":"exact"},{"name":"up-regulation of spore germination","type":"exact"},{"name":"upregulation of spore germination","type":"exact"}],"termid":"GO:1904361"}


id: PBO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin like 1","termid":"PBO:0042931"}


id: PBO:0079118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ts translation elongation factor, mitochondrial","termid":"PBO:0079118"}


id: SO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the long terminal repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_LTR_region","synonyms":[{"name":"U5 LTR region","type":"exact"},{"name":"U5 long terminal repeat region","type":"exact"}],"termid":"SO:0000422"}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:curators","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: GO:1903055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:rl","PMID:22357537","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"positively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix organization","synonyms":[{"name":"activation of extracellular matrix organisation","type":"narrow"},{"name":"activation of extracellular matrix organization","type":"narrow"},{"name":"activation of extracellular matrix organization and biogenesis","type":"related"},{"name":"positive regulation of extracellular matrix organisation","type":"exact"},{"name":"positive regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up regulation of extracellular matrix organisation","type":"exact"},{"name":"up regulation of extracellular matrix organization","type":"exact"},{"name":"up regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up-regulation of extracellular matrix organisation","type":"exact"},{"name":"up-regulation of extracellular matrix organization","type":"exact"},{"name":"up-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"upregulation of extracellular matrix organisation","type":"exact"},{"name":"upregulation of extracellular matrix organization","type":"exact"},{"name":"upregulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903055"}


id: GO:0089717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete spanning component of membrane (obsolete GO:0089717)","termid":"GO:0089717"}


id: PBO:0046690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein regulatory factor 1","termid":"PBO:0046690"}


id: PBO:0068523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 119, pseudogene","termid":"PBO:0068523"}


id: PBO:0047818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 pseudogene 2","termid":"PBO:0047818"}


id: GO:0005798
data:
  {"annotated_genes":["SJAG_00379","SJAG_02482","SJAG_02234","SJAG_00669","SJAG_04569","SJAG_04402","SJAG_01809","SJAG_02240","SJAG_00092","SJAG_04070","SJAG_01927","SJAG_03368","SJAG_00916","SJAG_02012","SJAG_04609","SJAG_04391","SJAG_01285","SJAG_04517","SJAG_04474","SJAG_00192","SJAG_01508","SJAG_02282","SJAG_04002","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91098,111034],"is_not":false,"summary":null,"term":"GO:0005798"},{"annotations":[108821,97177,109039,114878],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[108943,90961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[94520,89282,113419,94609,103162,100172,109796,99324,112414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[87677,89198,110177,95570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030137"},{"annotations":[95956,104838],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[96240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00192":null,"SJAG_00379":null,"SJAG_00669":null,"SJAG_00916":null,"SJAG_01285":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_01927":null,"SJAG_02012":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_03368":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"Golgi-associated vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao819927218"],"synonyms":[{"name":"Golgi vesicle","type":"related"},{"name":"vesicular component","type":"related"}],"termid":"GO:0005798","terms_by_termid":{"GO:0005798":null,"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030137":null,"GO:0030140":null,"GO:0034044":null}}


id: GO:0070337
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95419],"is_not":false,"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:15189154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"3'-flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070337","terms_by_termid":{"GO:0070337":null}}


id: PBO:0075503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 1","termid":"PBO:0075503"}


id: PBO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 1","termid":"PBO:0040034"}


id: FYPO:0001340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which a cellular response to oxidative stress is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress","termid":"FYPO:0000180"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to oxidative stress during vegetative growth","synonyms":[{"name":"abnormal cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"abnormal oxidative stress response during vegetative growth","type":"exact"}],"termid":"FYPO:0001340"}


id: GO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal amino acid with a broad specificity.","definition_xrefs":["EC:3.4.16.5"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase C activity (obsolete GO:0004186)","synonyms":[{"name":"carboxypeptidase C activity","type":"exact"},{"name":"carboxypeptidase Y activity","type":"related"},{"name":"cathepsin A activity","type":"narrow"},{"name":"deamidase","type":"related"},{"name":"lysosomal carboxypeptidase A","type":"narrow"},{"name":"lysosomal protective protein activity","type":"narrow"},{"name":"serine carboxypeptidase I activity","type":"related"},{"name":"serine-type carboxypeptidase I activity","type":"related"},{"name":"vacuolar carboxypeptidase Y","type":"narrow"}],"termid":"GO:0004186"}


id: RO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps y if and only if there exists some z such that x has part z and z part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps","termid":"RO:0002131"}


id: PBO:0063722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGR antisense RNA 1","termid":"PBO:0063722"}


id: GO:0030710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of border follicle cell delamination","synonyms":[{"name":"regulation of border cell delamination","type":"broad"}],"termid":"GO:0030710"}


id: PR:Q9Y7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ORAOV1 family protein C191.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.08","synonyms":[{"name":"Spom972h-lto1","type":"exact"}],"termid":"PR:Q9Y7Q1"}


id: FYPO:0007280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is decreased. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear exosome focus","termid":"FYPO:0002963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nuclear exosome focus","synonyms":[{"name":"decreased protein localisation to nuclear exosome focus","type":"exact"},{"name":"decreased protein localization to Mmi1 focus","type":"exact"},{"name":"decreased protein localization to Mmi1 nuclear focus complex","type":"exact"},{"name":"decreased protein localization to nuclear exosome foci","type":"exact"},{"name":"decreased protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"reduced protein localization to nuclear exosome focus","type":"exact"}],"termid":"FYPO:0007280"}


id: PBO:0030459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_biotin_import","termid":"PBO:0030459"}


id: GO:0062189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + N-(14,15-epoxy-5Z,8Z,11Z-eicosatrienoyl)-ethanolamine + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:21289075","RHEA:53148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anandamide epoxidase activity","termid":"GO:0062186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"anandamide 14,15 epoxidase activity","termid":"GO:0062189"}


id: GO:1990554
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97406],"is_not":false,"summary":null,"term":"GO:1990554"}]},"cv_name":"biological_process","definition":"The process in which 3'-phospho-5'-adenylyl sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-phospho-5'-adenylyl sulfate transmembrane transport","termid":"GO:1902559"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial 3'-phospho-5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990554","terms_by_termid":{"GO:1990554":null}}


id: PBO:0074891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 66","termid":"PBO:0074891"}


id: GO:0021967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed from its cell body in layer V through the cerebral cortex in response to a combination of attractive and repulsive cues.","definition_xrefs":["GO_REF:0000021","GOC:jid","PMID:9878731","GOC:dph","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the cerebral cortex","synonyms":[{"name":"corticospinal neuron axon pathfinding through the cerebral cortex","type":"narrow"}],"termid":"GO:0021967"}


id: FYPO:0004610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of prophase of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of meiotic prophase I","synonyms":[{"name":"long meiotic prophase I","type":"exact"},{"name":"prolonged meiotic prophase I","type":"exact"}],"termid":"FYPO:0004610"}


id: PBO:0039518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33B","termid":"PBO:0039518"}


id: FYPO:0007282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and branched, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable branched, swollen vegetative cell","synonyms":[{"name":"viable branched, swollen cell during vegetative growth","type":"exact"},{"name":"viable branched, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007282"}


id: PBO:0082653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of small ribosomal subunit (SSU) processosome; this complex contains U3 snoRNA; required at post-transcriptional step for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; originally isolated as bud-site selection mutant that displays a random budding pattern","termid":"PBO:0082653"}


id: PBO:0064211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 1","termid":"PBO:0064211"}


id: GO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-4 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-4 receptor binding","synonyms":[{"name":"IL-4","type":"narrow"},{"name":"interleukin-4 receptor ligand","type":"narrow"}],"termid":"GO:0005136"}


id: GO:0019057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts translation of mRNA into protein in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host translation","synonyms":[{"name":"host cell protein synthesis shutoff","type":"broad"},{"name":"modification by virus of host cell mRNA translation","type":"narrow"},{"name":"modulation by virus of host translation","type":"narrow"},{"name":"modulation of host translation by virus","type":"narrow"},{"name":"regulation of host mRNA translation","type":"exact"},{"name":"regulation of host translation","type":"exact"},{"name":"viral perturbation of host cell mRNA translation","type":"narrow"}],"termid":"GO:0019057"}


id: PBO:0040709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 14","termid":"PBO:0040709"}


id: GO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anilide + H2O = a carboxylate + aniline + H+.","definition_xrefs":["RHEA:20297","EC:3.5.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"aryl-acylamidase activity","secondary_identifiers":["KEGG_REACTION:R01862","MetaCyc:ARYL-ACYLAMIDASE-RXN"],"synonyms":[{"name":"AAA-1","type":"related"},{"name":"AAA-2","type":"related"},{"name":"aryl-acylamide amidohydrolase activity","type":"related"},{"name":"brain acetylcholinesterase (is associated with AAA-2)","type":"related"},{"name":"pseudocholinesterase (associated with arylacylamidase)","type":"related"}],"termid":"GO:0047680"}


id: PBO:0040470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR serine/threonine kinase","termid":"PBO:0040470"}


id: PBO:0027883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation","termid":"PBO:0027883"}


id: PBO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 27","termid":"PBO:0062043"}


id: GO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of alternate transcripts of immunoglobulin genes through alternate splicing of exons.","definition_xrefs":["ISBN:0781735149","PMID:9185563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via alternate splicing","termid":"GO:0002563"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"alternate splicing of immunoglobulin genes","synonyms":[{"name":"alternate splicing of antibody genes","type":"exact"}],"termid":"GO:0002564"}


id: GO:1904360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spore germination.","definition_xrefs":["PMID:8798577","GO_REF:0000058","GOC:TermGenie","PMID:14718564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"negatively_regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore germination","secondary_identifiers":["GO:0075008"],"synonyms":[{"name":"down regulation of spore germination","type":"exact"},{"name":"down-regulation of spore germination","type":"exact"},{"name":"downregulation of spore germination","type":"exact"},{"name":"inhibition of spore germination","type":"narrow"},{"name":"negative regulation of spore germination on or near host","type":"narrow"}],"termid":"GO:1904360"}


id: PBO:0071864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 2","termid":"PBO:0071864"}


id: GO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-keto-5-aminohexanoate + acetyl-CoA = L-3-aminobutyryl-CoA + acetoacetate.","definition_xrefs":["PMID:13064","MetaCyc:R125-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"3-keto-5-aminohexanoate cleavage activity","secondary_identifiers":["RHEA:31555"],"synonyms":[{"name":"3-keto-5-aminohexanoate cleavage enzyme","type":"exact"}],"termid":"GO:0043720"}


id: PATO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female pseudohermaphrodite","termid":"PATO:0001829"}


id: PBO:0078703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 5-1","termid":"PBO:0078703"}


id: FYPO:0007429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:15805471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: GO:0006943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of chemical energy into mechanical work (as in the contraction of a muscle).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete chemi-mechanical coupling (obsolete GO:0006943)","synonyms":[{"name":"chemi-mechanical coupling","type":"exact"},{"name":"mechanochemical coupling","type":"exact"}],"termid":"GO:0006943"}


id: PBO:0108960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0108960"}


id: PBO:0110414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 4","termid":"PBO:0110414"}


id: GO:0021675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nerve development","termid":"GO:0021675"}


id: PBO:0091767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific HMG-box DNA-binding transcription factor Mc at silenced MAT3 locus","termid":"PBO:0091767"}


id: PBO:0041128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 9","termid":"PBO:0041128"}


id: CHEBI:35696
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"Chloride of cobalt in which the metal is in the +2 oxidation state.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt dichloride","termid":"CHEBI:35696"}


id: GO:0050311
data:
  {"annotated_genes":["SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83893],"is_not":false,"summary":null,"term":"GO:0050311"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 oxidized ferredoxin + 3 H2O = sulfite + 3 reduced ferredoxin.","definition_xrefs":["EC:1.8.7.1","MetaCyc:SULFITE-REDUCTASE-FERREDOXIN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","termid":"GO:0016673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (ferredoxin) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:23132"],"synonyms":[{"name":"ferredoxin-sulfite reductase activity","type":"related"},{"name":"hydrogen-sulfide:ferredoxin oxidoreductase activity","type":"related"},{"name":"sulphite reductase (ferredoxin) activity","type":"exact"}],"termid":"GO:0050311","terms_by_termid":{"GO:0050311":null}}


id: CHEBI:64090
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tert-butyl hydroperoxide","termid":"CHEBI:64090"}


id: PBO:0039260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 2","termid":"PBO:0039260"}


id: PBO:0081096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 21","termid":"PBO:0081096"}


id: GO:2000259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein activation cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"positively_regulates","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"positive regulation of protein activation cascade","synonyms":[{"name":"positive regulation of protein activation pathway","type":"exact"},{"name":"positive regulation of protein activitory cascade","type":"exact"}],"termid":"GO:2000259"}


id: PBO:0087330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin; involved in the retrieval of late-Golgi SNAREs from the post-Golgi endosome to the trans-Golgi network; interacts with Snx4p","termid":"PBO:0087330"}


id: PBO:0004762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg3","termid":"PBO:0004762"}


id: PBO:0064832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10","termid":"PBO:0064832"}


id: PBO:0046956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 78 member A","termid":"PBO:0046956"}


id: PBO:0077255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 6","termid":"PBO:0077255"}


id: MOD:01045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-dichloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichlorinated tyrosine","termid":"MOD:01037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-dichloro-L-tyrosine","synonyms":[{"name":"3',5'-Cl2Tyr","type":"exact"}],"termid":"MOD:01045"}


id: PBO:0041553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 25","termid":"PBO:0041553"}


id: PBO:0047158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 185 member B, pseudogene","termid":"PBO:0047158"}


id: GO:0030757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,7-tetrahydroxy-3-methoxyflavone + S-adenosyl-L-methionine(1+) = 3',4',5-trihydroxy-3,7-dimethoxyflavone + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.82","RHEA:16181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"3-methylquercitin 7-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05323","MetaCyc:2.1.1.82-RXN"],"synonyms":[{"name":"3-methylquercetin 7-O-methyltransferase activity","type":"related"},{"name":"7-OMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5,7-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5,7,3',4'-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-methyltransferase activity","type":"related"}],"termid":"GO:0030757"}


id: PBO:0058752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6876","termid":"PBO:0058752"}


id: GO:1903200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-dopa decarboxylase activity.","definition_xrefs":["GO_REF:0000059","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:19703902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"},{"relation_name":"is_a","term_name":"regulation of L-dopa decarboxylase activity","termid":"GO:1903198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-dopa decarboxylase activity","synonyms":[{"name":"activation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"narrow"},{"name":"activation of DDC activity","type":"narrow"},{"name":"activation of DOPA decarboxylase activity","type":"narrow"},{"name":"activation of L-dopa decarboxylase activity","type":"narrow"},{"name":"positive regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"positive regulation of DDC activity","type":"exact"},{"name":"positive regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up regulation of DDC activity","type":"exact"},{"name":"up regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"up-regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up-regulation of DDC activity","type":"exact"},{"name":"up-regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up-regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"upregulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"upregulation of DDC activity","type":"exact"},{"name":"upregulation of DOPA decarboxylase activity","type":"exact"},{"name":"upregulation of L-dopa decarboxylase activity","type":"exact"}],"termid":"GO:1903200"}


id: GO:0045884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_apoptosis","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of survival gene product expression (obsolete GO:0045884)","synonyms":[{"name":"regulation of survival gene product activity","type":"broad"},{"name":"regulation of survival gene product expression","type":"exact"},{"name":"regulation of survival gene products","type":"broad"}],"termid":"GO:0045884"}


id: PBO:0051897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 6","termid":"PBO:0051897"}


id: GO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052199)","synonyms":[{"name":"down regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of enzyme activity in other organism","type":"exact"},{"name":"inhibition of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of enzyme activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052199"}


id: PBO:0038729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 24","termid":"PBO:0038729"}


id: PBO:0003185
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.2","termid":"PBO:0003185"}


id: GO:0009954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation","synonyms":[{"name":"proximal/distal pattern specification","type":"narrow"}],"termid":"GO:0009954"}


id: FYPO:0001007
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115111],"is_not":false,"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitosis","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"mitosis: normal","type":"exact"},{"name":"normal mitosis during mitotic cell cycle","type":"related"},{"name":"normal mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0001007","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PBO:0084730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; 2-oxodicarboxylate transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochondrial matrix to the cytosol for lysine and glutamate biosynthesis and lysine catabolism; suppresses, in multicopy, an fmc1 null mutation; ODC1 has a paralog, ODC2, that arose from the whole genome duplication","termid":"PBO:0084730"}


id: PBO:0085685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from arrest in response to pheromone; acts in a cell cycle arrest recovery pathway independent from Far1p; interacts with Far3p, Far7p, Far8p, Far9p, and Far11p; potential Cdc28p substrate; FAR10 has a paralog, VPS64, that arose from the whole genome duplication","termid":"PBO:0085685"}


id: PBO:0044415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily T member 1, pseudogene","termid":"PBO:0044415"}


id: PBO:0045392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 3","termid":"PBO:0045392"}


id: PBO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 43","termid":"PBO:0050981"}


id: PBO:0048872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4 pseudogene 3","termid":"PBO:0048872"}


id: PR:O74847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A brain protein 44-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04225","PANTHER:PTHR14154:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.11","secondary_identifiers":["UniProtKB:O74847"],"synonyms":[{"name":"MPC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MPC1","type":"exact"}],"termid":"PR:O74847"}


id: GO:0080024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants.","definition_xrefs":["PMID:18725356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indolebutyric acid metabolic process","synonyms":[{"name":"IBA metabolic process","type":"exact"},{"name":"IBA metabolism","type":"exact"},{"name":"indole-3-butyric acid metabolic process","type":"narrow"}],"termid":"GO:0080024"}


id: SOFP:encoded_symbol
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"dicistronic CDS/proteins are attached to a single gene feature representing the whole cassette - in which case the symbol refers to the cassette. encoded_symbol refers to a gene in the sense of non-overlapping CDS set. cf Adh and Adhr in dmel","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encoded_symbol","termid":"SOFP:encoded_symbol"}


id: PBO:0057325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519e","termid":"PBO:0057325"}


id: PBO:0082779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sum1p-Rfm1p-Hst1p complex; Rfm1p tethers the Hst1p histone deacetylase to the DNA-binding protein Sum1p; complex is involved in transcriptional repression of middle sporulation genes and in initiation of DNA replication","termid":"PBO:0082779"}


id: GO:0042116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","PMID:14506301","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation","synonyms":[{"name":"macrophage polarization","type":"exact"}],"termid":"GO:0042116"}


id: PBO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-tRNA ligase (predicted)","termid":"PBO:0001177"}


id: FYPO:0001066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of threonine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal threonine import","termid":"FYPO:0001065"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased threonine import","synonyms":[{"name":"decreased L-threonine import","type":"exact"},{"name":"decreased L-threonine import across plasma membrane","type":"exact"},{"name":"decreased threonine import during mitotic cell cycle","type":"related"},{"name":"decreased threonine import during vegetative growth","type":"exact"},{"name":"decreased threonine import into cell","type":"exact"},{"name":"decreased threonine uptake","type":"exact"},{"name":"reduced threonine import","type":"exact"}],"termid":"FYPO:0001066"}


id: GO:0022010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment in central nervous system","termid":"GO:0032291"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"oligodendrocyte development","termid":"GO:0014003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system myelination","synonyms":[{"name":"myelination in central nervous system","type":"exact"}],"termid":"GO:0022010"}


id: PBO:0108687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec73","termid":"PBO:0108687"}


id: PBO:0054376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1772","termid":"PBO:0054376"}


id: PBO:0055208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2633","termid":"PBO:0055208"}


id: GO:0061455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the muscle cell projection membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of muscle cell projection membrane (obsolete GO:0061455)","synonyms":[{"name":"integral to muscle cell projection membrane","type":"exact"}],"termid":"GO:0061455"}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: PBO:0030630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_maltose_carbon_source","termid":"PBO:0030630"}


id: FYPO:0004937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the first meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during meiosis I","synonyms":[{"name":"decreased RNA accumulation during meiosis I","type":"related"},{"name":"decreased RNA level during first meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis I","type":"exact"},{"name":"reduced RNA level during meiosis I","type":"exact"}],"termid":"FYPO:0004937"}


id: PBO:0074866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 50B","termid":"PBO:0074866"}


id: PBO:0043011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase alpha","termid":"PBO:0043011"}


id: GO:0035869
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm.","definition_xrefs":["GOC:cilia","GOC:kmv","PMID:21422230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary transition zone","synonyms":[{"name":"cilial transition zone","type":"exact"},{"name":"cilium transition zone","type":"exact"},{"name":"connecting cilium","type":"related"}],"termid":"GO:0035869"}


id: FYPO:0001969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on papulacandin B","termid":"FYPO:0001969"}


id: PBO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP95 divergent transcript","termid":"PBO:0042864"}


id: GO:0141038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a phosphatidylinositol 3-kinase (PI3K).","definition_xrefs":["PMID:31686003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase regulator activity","termid":"GO:0035014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase activator activity","termid":"GO:0141038"}


id: PBO:0027325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027325"}


id: GO:0006792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sulfur utilization","synonyms":[{"name":"regulation of sulphur utilization","type":"exact"}],"termid":"GO:0006792"}


id: PBO:0044146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiase","termid":"PBO:0044146"}


id: PBO:0049769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 7","termid":"PBO:0049769"}


id: PBO:0057261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 487a","termid":"PBO:0057261"}


id: FYPO:0005362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is abnormal during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PomBase:mah","PMID:18256284","GO:1990942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000337","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic metaphase chromosome recapture","synonyms":[{"name":"abnormal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abnormal mitotic kinetochore retrieval","type":"exact"},{"name":"abnormal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abnormal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abnormal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005362"}


id: CHEBI:75142
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal","termid":"CHEBI:75142"}


id: PR:P30655
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.13c","secondary_identifiers":["UniProtKB:P30655"],"synonyms":[{"name":"SPAC4A8.13c","type":"related"},{"name":"Spom972h-PSMB5","type":"exact"},{"name":"macropain subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"multicatalytic endopeptidase complex subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"proteasome component pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30655"}


id: GO:0047855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrobunolol + NADP+ = bunolol + H+ + NADPH.","definition_xrefs":["RHEA:15925","EC:1.1.1.160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydrobunolol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04623","MetaCyc:DIHYDROBUNOLOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+-)-5-[(tert-butylamino)-2'-hydroxypropoxy]-1,2,3,4-tetrahydro-1-naphthol:NADP+ oxidoreductase activity","type":"related"},{"name":"bunolol reductase activity","type":"related"}],"termid":"GO:0047855"}


id: GO:0039017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the pronephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in pronephros development","synonyms":[{"name":"pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039017"}


id: GO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor nuclear translocator activity (obsolete GO:0005061)","synonyms":[{"name":"aryl hydrocarbon receptor nuclear translocator activity","type":"exact"}],"termid":"GO:0005061"}


id: PBO:0073222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6C","termid":"PBO:0073222"}


id: PBO:0031814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_autophagy","termid":"PBO:0031814"}


id: GO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An supramolecular fiber that consists of an insoluble core of polymerized tropoelastin monomers and a surrounding mantle of microfibrils. Elastic fibers provide elasticity and recoiling to tissues and organs, and maintain structural integrity against mechanical strain.","definition_xrefs":["PMID:20236620","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"elastic fiber","synonyms":[{"name":"elastic fibre","type":"exact"},{"name":"elastin fiber","type":"exact"}],"termid":"GO:0071953"}


id: GO:0007214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to its receptor on the surface of a target cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gamma-aminobutyric acid signaling pathway","synonyms":[{"name":"4-aminobutanoate signaling pathway","type":"exact"},{"name":"4-aminobutanoate signalling pathway","type":"exact"},{"name":"4-aminobutyrate signaling pathway","type":"exact"},{"name":"4-aminobutyrate signalling pathway","type":"exact"},{"name":"GABA signaling pathway","type":"exact"},{"name":"GABA signalling pathway","type":"exact"},{"name":"gamma-aminobutyric acid signalling pathway","type":"exact"}],"termid":"GO:0007214"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: GO:0097753
data:
  {"annotated_genes":["SJAG_01848","SJAG_03795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115155,115161],"is_not":false,"summary":null,"term":"GO:0097753"}]},"cv_name":"biological_process","definition":"A membrane organization process resulting in the bending of a membrane.","definition_xrefs":["GOC:vw","Wikipedia:Membrane_curvature","GOC:krc","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_03795":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane bending","references_by_uniquename":{"PMID:33495454":null},"synonyms":[{"name":"membrane curvature","type":"related"}],"termid":"GO:0097753","terms_by_termid":{"GO:0097753":null}}


id: PBO:0047748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin interacting protein 1","termid":"PBO:0047748"}


id: PBO:0047505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 6","termid":"PBO:0047505"}


id: GO:0075524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A translation process in which a specific viral peptide prevents the ribosome from covalently linking a new inserted amino acid, and lets it continue translation, thereby cleaving the nascent protein while allowing translation to continue.","definition_xrefs":["GOC:ch","VZ:914","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribosomal skipping","termid":"GO:0075524"}


id: GO:0017103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + UTP = diphosphate + UDP-D-galactose.","definition_xrefs":["RHEA:14209","EC:2.7.7.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"UTP:galactose-1-phosphate uridylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00502","MetaCyc:UTPHEXPURIDYLYLTRANS-RXN","GO:0003982"],"synonyms":[{"name":"Gal-1-P uridylyltransferase activity","type":"broad"},{"name":"UDPgalactose pyrophosphorylase activity","type":"related"},{"name":"UTP-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:hexose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"alpha-D-galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"uridine diphosphate galactose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphogalactose pyrophosphorylase activity","type":"related"}],"termid":"GO:0017103"}


id: PBO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ transcription initiation factor Taf9","termid":"PBO:0000296"}


id: PBO:0004644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Did2 (predicted)","termid":"PBO:0004644"}


id: GO:0052520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of nutrient release from other organism involved in symbiotic interaction (obsolete GO:0052520)","synonyms":[{"name":"activation by organism of nutrient release from other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"promotion of nutrient release from other organism","type":"exact"},{"name":"stimulation by organism of nutrient release from other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052520"}


id: SO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reading frame that could encode a full-length protein but which contains obvious mid-sequence disablements (frameshifts or premature stop codons).","definition_xrefs":["SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disabled_reading_frame","synonyms":[{"name":"dORF","type":"exact"},{"name":"disabled ORF","type":"exact"},{"name":"disabled_reading frame","type":"related"}],"termid":"SO:0002048"}


id: PBO:0065387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 1","termid":"PBO:0065387"}


id: SO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box H/ACA sequence motif, guiding the pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_scaRNA_gene","synonyms":[{"name":"H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002373"}


id: GO:0140877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mevastatin , also known as compactin or ML-236B, and which acts as a potent competitive inhibitor of HMG-CoA reductase.","definition_xrefs":["PMID:12172803","PMID:12242508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mevastatin biosynthetic process","synonyms":[{"name":"mevastatin anabolism","type":"exact"},{"name":"mevastatin biosynthesis","type":"exact"},{"name":"mevastatin formation","type":"exact"},{"name":"mevastatin synthesis","type":"exact"}],"termid":"GO:0140877"}


id: GO:0106186
data:
  {"annotated_genes":["SJAG_02392","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91915,102628],"is_not":false,"summary":null,"term":"GO:0106186"}]},"cv_name":"cellular_component","definition":"The leaflet the plasma membrane at the cell tip that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:vw","PMID:28292899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"},{"relation_name":"part_of","term_name":"plasma membrane of cell tip","termid":"GO:0031520"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytoplasmic side of plasma membrane, cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106186","terms_by_termid":{"GO:0106186":null}}


id: PBO:0059014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 1","termid":"PBO:0059014"}


id: PBO:0108620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 3","termid":"PBO:0108620"}


id: GO:0060664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells of the submandibular salivary gland, resulting in the expansion of a cell population and the shaping of the gland.","definition_xrefs":["PMID:17336109","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in salivary gland morphogenesis","termid":"GO:0060664"}


id: PBO:0079559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAC2 antisense RNA 1","termid":"PBO:0079559"}


id: GO:0141176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which Piwi-associated RNAs (piRNAs) guide de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:38359823","PMID:32674113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"piRNA-mediated heterochromatin formation","termid":"GO:0140966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"gene silencing by piRNA-directed DNA methylation","termid":"GO:0141176"}


id: PBO:0040467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase mitochondrial F1 complex assembly factor 1","termid":"PBO:0040467"}


id: GO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of platelet aggregation","termid":"GO:0090330"}


id: PBO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-3","termid":"PBO:0052874"}


id: PBO:0027990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_small_cell","termid":"PBO:0027990"}


id: PBO:0005157
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calnexin Independence Factor","termid":"PBO:0005157"}


id: PBO:0017888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1 (predicted)","termid":"PBO:0017888"}


id: PBO:0084061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family member Ypt6p; involved in vesicle mediated protein transport","termid":"PBO:0084061"}


id: FYPO:0006777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the prospore membrane forms, and may complete closure, without enclosing a nucleus; one or more nuclei may be present in the ascus, not enclosed by any prospore membrane.","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000121","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"prospore membrane formation excluding nucleus","synonyms":[{"name":"ectopic prospore membrane formation","type":"related"},{"name":"prospore membrane assembly excluding nucleus","type":"exact"},{"name":"prospore membrane closure excluding nucleus","type":"related"},{"name":"prospore membrane excluding nucleus","type":"exact"}],"termid":"FYPO:0006777"}


id: PBO:0045942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B2","termid":"PBO:0045942"}


id: PBO:0013767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase ipp1 (predicted)","termid":"PBO:0013767"}


id: GO:0021946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the ventricular zone to the deep hindbrain nuclei.","definition_xrefs":["GOC:dph","PMID:15157725","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron cell migration","termid":"GO:0021946"}


id: GO:0016942
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor complex","termid":"GO:0036454"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"insulin-like growth factor binding protein complex","synonyms":[{"name":"IGF binding protein complex","type":"exact"}],"termid":"GO:0016942"}


id: GO:0019914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme cyclin-dependent protein kinase activating kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase regulator activity","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019914"}


id: PBO:0090865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt2","termid":"PBO:0090865"}


id: PBO:0043213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 6","termid":"PBO:0043213"}


id: GO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"negative regulation of microtubule depolymerization","synonyms":[{"name":"down regulation of microtubule depolymerization","type":"exact"},{"name":"down-regulation of microtubule depolymerization","type":"exact"},{"name":"downregulation of microtubule depolymerization","type":"exact"},{"name":"inhibition of microtubule depolymerization","type":"narrow"},{"name":"microtubule rescue","type":"narrow"},{"name":"microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule catastrophe","type":"narrow"},{"name":"negative regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0007026"}


id: PBO:0076277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 1","termid":"PBO:0076277"}


id: FYPO:0001327
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115392,115393,115394],"is_not":false,"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level during vegetative growth","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000762"],"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_03575"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation during vegetative growth","type":"related"},{"name":"increased protein level during mitotic cell cycle","type":"related"},{"name":"protein accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001327","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: GO:0098629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a trans-Golgi network membrane.","definition_xrefs":["GOC:dos","PMID:23345439","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"trans-Golgi network membrane organization","termid":"GO:0098629"}


id: PBO:0057230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 409","termid":"PBO:0057230"}


id: PBO:0059702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 10","termid":"PBO:0059702"}


id: GO:0014044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"Schwann cell differentiation","termid":"GO:0014037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell development","termid":"GO:0014044"}


id: PBO:0039546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD42 divergent transcript","termid":"PBO:0039546"}


id: PBO:0078927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-3","termid":"PBO:0078927"}


id: PBO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POlyPloidy","termid":"PBO:0018043"}


id: GO:0031590
data:
  {"annotated_genes":["SJAG_04265","SJAG_04735","SJAG_01261","SJAG_05334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90772,94141,101964,109869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["GOC:mah","RNAmods:037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wybutosine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"wybutosine metabolism","type":"exact"},{"name":"yW metabolic process","type":"exact"},{"name":"yW metabolism","type":"exact"}],"termid":"GO:0031590","terms_by_termid":{"GO:0031591":null}}


id: PBO:0055728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 2","termid":"PBO:0055728"}


id: GO:1902166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902230"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902166"}


id: PBO:0084439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL4","termid":"PBO:0084439"}


id: PBO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein like","termid":"PBO:0061068"}


id: GO:0051594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a glucose stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hexose stimulus","termid":"GO:0009732"},{"relation_name":"is_a","term_name":"response to glucose","termid":"GO:0009749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of glucose","synonyms":[{"name":"glucose detection","type":"exact"},{"name":"glucose perception","type":"related"},{"name":"glucose sensing","type":"related"}],"termid":"GO:0051594"}


id: PBO:0056569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalin 1","termid":"PBO:0056569"}


id: FYECO:0000338
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115543,115546,115539,115537,115542,115528,115529,115544,115545,115547],"is_not":false,"summary":null,"term":"FYECO:0000338"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3-BrB-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_01794":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga6delta wee1-as8(T582G aa)","display_uniquename":"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_00028","SJAG_04522"],"name":"+ 3-BrB-PP1","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYECO:0000338","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0004735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node","termid":"FYPO:0003919"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0007027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to medial cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to cortical medial dot, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes, with protein mislocalized to cytoplasm","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical nodes, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to medial cortical node, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to medial cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0004735"}


id: GO:0020018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the plasma membrane found in the ciliary pocket (also called flagellar pocket).","definition_xrefs":["GOC:cilia","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"part_of","term_name":"ciliary pocket","termid":"GO:0020016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ciliary pocket membrane","synonyms":[{"name":"cilial pocket membrane","type":"exact"},{"name":"cilium pocket membrane","type":"exact"},{"name":"flagellar pocket membrane","type":"exact"}],"termid":"GO:0020018"}


id: PATO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000392 limited (obsolete PATO:0000392)","termid":"PATO:0000392"}


id: PBO:0005208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA metabolism pathway protein Pet127","termid":"PBO:0005208"}


id: PBO:0036499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get2","termid":"PBO:0036499"}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: GO:0044787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The DNA-dependent DNA replication, exemplified by prokaryotes, that occurs as part of the cell cycle. Prokaryotic DNA replication is bi-directional and originates at a single origin of replication on the circular genome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"bacterial-type DNA replication","synonyms":[{"name":"bacterial-type cell cycle DNA replication","type":"exact"}],"termid":"GO:0044787"}


id: GO:0072655
data:
  {"annotated_genes":["SJAG_02355","SJAG_02398","SJAG_02809","SJAG_07010","SJAG_00196","SJAG_00687","SJAG_03633","SJAG_03416","SJAG_02034","SJAG_01442","SJAG_04533","SJAG_04641","SJAG_00564","SJAG_01780","SJAG_03502","SJAG_01560","SJAG_02397","SJAG_03648","SJAG_03415","SJAG_05300","SJAG_05259","SJAG_00569","SJAG_02797","SJAG_02361","SJAG_04432","SJAG_01615","SJAG_04208","SJAG_04996","SJAG_00404","SJAG_04014","SJAG_02524","SJAG_04218","SJAG_02077","SJAG_01405","SJAG_01004","SJAG_05302","SJAG_03515","SJAG_01597","SJAG_00373","SJAG_03358","SJAG_01951","SJAG_01949","SJAG_01120","SJAG_01879","SJAG_01684","SJAG_04336","SJAG_02917","SJAG_01640","SJAG_03560","SJAG_01917"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94559,84452,105810],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[113268,86985,103613,111269,96370,99340,102211,98746,103636,95483,105923,90589,112818,95298,101219,107841,95593,84453,103553,85636,92957],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[95484,112308,88854,103637,84774,86488,103337,103554,98981,103614,109241],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[96967,84913,110733,109394,95064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[110734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[94303,86995,106452,103615,94648,106092,86468,106442,107835],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[109234,98263,88377,101621,104121,105238],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[94469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to the mitochondrion or a part of the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to mitochondrion","type":"exact"},{"name":"establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:0072655","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0051204":null}}


id: MOD:01818
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two tryptophan residues to form 1'-(L-tryptophan-3'-yl)-L-tryptophan.","definition_xrefs":["PubMed:20600836","RESID:AA0544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(L-tryptophan-3'-yl)-L-tryptophan","synonyms":[{"name":"(2S,2'S)-3,3'-(3'H-1,3'-biindole-3,3'-diyl)bis(2-aminopropanoic acid)","type":"exact"},{"name":"1-(L-tryptophan-3-yl)-L-tryptophan","type":"exact"},{"name":"2-amino-3-[2-[2-amino-3-(2-carboxyethyl)-1H-indol-4-yl]-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-3-(3-[(2S)-2-amino-2-carboxyethyl]-1H-indol-2-yl)-1H-indole","type":"exact"},{"name":"3-[2-azanyl-2-carboxyethyl]-3-(3-[2-azanyl-2-carboxyethyl]-1H-indol-2-yl)-1H-indole","type":"exact"},{"name":"ditryptophan","type":"exact"}],"termid":"MOD:01818"}


id: GO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of the renal capsule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"renal capsule formation","termid":"GO:0072129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule specification","termid":"GO:0072130"}


id: PBO:0060277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 10","termid":"PBO:0060277"}


id: PBO:0049793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0049793"}


id: PBO:0079995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 33","termid":"PBO:0079995"}


id: GO:0034757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of iron ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of iron ion transport","synonyms":[{"name":"down regulation of iron ion transport","type":"exact"},{"name":"down-regulation of iron ion transport","type":"exact"},{"name":"downregulation of iron ion transport","type":"exact"},{"name":"inhibition of iron ion transport","type":"narrow"},{"name":"negative regulation of iron transport","type":"exact"}],"termid":"GO:0034757"}


id: FYPO:0006088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to DNA damage. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal DNA binding during cellular response to DNA damage","synonyms":[{"name":"normal DNA binding in response to DNA damage","type":"related"}],"termid":"FYPO:0006088"}


id: PBO:0069521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 790, pseudogene","termid":"PBO:0069521"}


id: GO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"positive regulation of bile acid metabolic process","termid":"GO:1904253"},{"relation_name":"positively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of bile acid biosynthetic process","synonyms":[{"name":"activation of bile acid biosynthetic process","type":"narrow"},{"name":"positive regulation of bile acid anabolism","type":"exact"},{"name":"positive regulation of bile acid biosynthesis","type":"exact"},{"name":"positive regulation of bile acid formation","type":"exact"},{"name":"positive regulation of bile acid synthesis","type":"exact"},{"name":"stimulation of bile acid biosynthetic process","type":"narrow"},{"name":"up regulation of bile acid biosynthetic process","type":"exact"},{"name":"up-regulation of bile acid biosynthetic process","type":"exact"},{"name":"upregulation of bile acid biosynthetic process","type":"exact"}],"termid":"GO:0070859"}


id: GO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to pathogenic protozoa (obsolete GO:0001564)","synonyms":[{"name":"resistance to pathogenic protozoa","type":"exact"}],"termid":"GO:0001564"}


id: PBO:0077100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8B pseudogene 1","termid":"PBO:0077100"}


id: PBO:0058452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5091","termid":"PBO:0058452"}


id: FYPO:0002633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular dTTP level","synonyms":[{"name":"increased cellular dTTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dTTP level during vegetative growth","type":"exact"},{"name":"increased dTTP accumulation","type":"related"}],"termid":"FYPO:0002633"}


id: PBO:0004657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf4","termid":"PBO:0004657"}


id: FYPO:0003850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an oligomycin antibiotic.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on oligomycin","synonyms":[{"name":"normal cell population growth in presence of oligomycin","type":"exact"},{"name":"normal cell population growth on oligomycin","type":"exact"},{"name":"normal cellular response to oligomycin","type":"related"},{"name":"normal vegetative cell population growth on oligomycin","type":"exact"}],"termid":"FYPO:0003850"}


id: PBO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1","termid":"PBO:0033831"}


id: GO:0033660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"modulation by symbiont of host resistance gene-dependent defense response","termid":"GO:0052158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host resistance gene-dependent defense response","synonyms":[{"name":"down regulation by symbiont of defense response in host by specific elicitors","type":"exact"},{"name":"down-regulation by symbiont of host gene-for-gene resistance","type":"exact"},{"name":"downregulation by symbiont of pathogen-race/host plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"inhibition by symbiont of host resistance gene-dependent defense response","type":"narrow"},{"name":"negative regulation by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"suppression by symbiont of host resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0033660"}


id: PBO:0042912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 2","termid":"PBO:0042912"}


id: GO:0039662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that forms the outermost layer of the cell envelope, occurring in a host cell.","definition_xrefs":["GOC:bf","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host outer membrane","termid":"GO:0044384"},{"relation_name":"part_of","term_name":"host cell envelope","termid":"GO:0044230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell outer membrane","synonyms":[{"name":"host cell envelope outer membrane","type":"exact"},{"name":"outer membrane of host cell","type":"exact"}],"termid":"GO:0039662"}


id: PBO:0025472
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microcephaly-capillary malformation syndrome (MICCAP)","termid":"PBO:0025472"}


id: GO:0098892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic specialization membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"},{"relation_name":"part_of","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic specialization membrane","termid":"GO:0098892"}


id: FYPO:0004148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxamine-phosphate oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal pyridoxamine-phosphate oxidase activity","termid":"FYPO:0004148"}


id: PBO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 13","termid":"PBO:0050727"}


id: PBO:0027285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0027285"}


id: PBO:0036365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Ptr1","termid":"PBO:0036365"}


id: PBO:0040990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2B","termid":"PBO:0040990"}


id: GO:0047538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-carboxy-D-arabinitol 1-phosphate + H2O = 2-carboxy-D-arabinitol + phosphate.","definition_xrefs":["RHEA:17837","EC:3.1.3.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-carboxy-D-arabinitol-1-phosphatase activity","secondary_identifiers":["MetaCyc:2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN","KEGG_REACTION:R04167"],"synonyms":[{"name":"2-carboxy-D-arabinitol 1-phosphate phosphohydrolase activity","type":"related"},{"name":"2-carboxy-D-arabinitol-1-phosphate 1-phosphohydrolase activity","type":"related"},{"name":"2-carboxyarabinitol 1-phosphatase activity","type":"related"}],"termid":"GO:0047538"}


id: PBO:0073471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan alpha","termid":"PBO:0073471"}


id: PBO:0065262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23 domain containing 3, pseudogene","termid":"PBO:0065262"}


id: PBO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga1","termid":"PBO:0036487"}


id: GO:0120234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A glycocalyx on the the endolymphatic surface of a cochlear hair cell that coats the external surface of each stereocilium and maintains a small distance between adjacent stereocilia in the bundle.","definition_xrefs":["PMID:31444330","GOC:krc","ISBN:9781461268918","PMID:3583936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium coat","synonyms":[{"name":"auditory hair cell glycocalyx","type":"broad"},{"name":"stereocilium glycocalyx","type":"exact"}],"termid":"GO:0120234"}


id: FYECO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which calcium chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CaCl2","synonyms":[{"name":"+ calcium chloride","type":"exact"}],"termid":"FYECO:0000261"}


id: GO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another that contributes to the migration of mesendodermal tissue.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"mesendoderm migration","termid":"GO:0090133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}


id: PBO:0090683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer1 family protein","termid":"PBO:0090683"}


id: FYPO:0004400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5823.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on KT5823","synonyms":[{"name":"normal cell population growth in presence of KT5823","type":"exact"},{"name":"normal cell population growth on KT5823","type":"exact"},{"name":"normal cellular response to KT5823","type":"related"},{"name":"normal vegetative cell population growth on KT5823","type":"exact"}],"termid":"FYPO:0004400"}


id: PBO:0078021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 11","termid":"PBO:0078021"}


id: PBO:0065382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 9","termid":"PBO:0065382"}


id: PBO:0074976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-18","termid":"PBO:0074976"}


id: GO:0070916
data:
  {"annotated_genes":["SJAG_03015","SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91213,93570],"is_not":false,"summary":null,"term":"GO:0070916"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses inositol phosphoceramide synthase activity and contains a catalytic subunit and a regulatory subunit (Aur1p and Kei1p, respectively, in Saccharomyces).","definition_xrefs":["PMID:19726565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"inositol phosphoceramide synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPC synthase complex","type":"exact"}],"termid":"GO:0070916","terms_by_termid":{"GO:0070916":null}}


id: PBO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.11","termid":"PBO:0002301"}


id: PBO:0085800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains sequence that closely resembles a J domain (typified by the E. coli DnaJ protein)","termid":"PBO:0085800"}


id: GO:1990129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication restart after a stalled replication fork has been repaired.","definition_xrefs":["GOC:bhm","PMID:17139333"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication restart (obsolete GO:1990129)","synonyms":[{"name":"pre-primosome complex involved in replication restart","type":"exact"}],"termid":"GO:1990129"}


id: GO:0102259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 1,2-diacyl-sn-glycerol = a monoglyceride + a fatty acid.","definition_xrefs":["PMID:1477884","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"1,2-diacylglycerol acylhydrolase activity","secondary_identifiers":["MetaCyc:RXN-12434"],"termid":"GO:0102259"}


id: GO:0097433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense body which may contain granules.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao730872736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"dense body","termid":"GO:0097433"}


id: GO:0034121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor signaling pathway","synonyms":[{"name":"regulation of TLR signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034121"}


id: GO:0060665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching involved in salivary gland morphogenesis as a result of signals being generated by the mesenchyme and received and interpreted by the salivary gland epithelium.","definition_xrefs":["PMID:17336109","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060665"}


id: PBO:0081068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC1 pseudogene 1","termid":"PBO:0081068"}


id: GO:1903204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oxidative stress-induced neuron death.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24252804","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oxidative stress-induced neuron death (obsolete GO:1903204)","synonyms":[{"name":"down regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"down regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"down regulation of oxidative stress-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"down-regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"down-regulation of oxidative stress-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to oxidative stress","type":"exact"},{"name":"downregulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"downregulation of oxidative stress-induced neuron death","type":"exact"},{"name":"inhibition of neuron death in response to oxidative stress","type":"narrow"},{"name":"inhibition of neuronal cell death in response to oxidative stress","type":"narrow"},{"name":"inhibition of oxidative stress-induced neuron death","type":"narrow"},{"name":"negative regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"neuronal protection under oxidative stress","type":"related"},{"name":"neuroprotection against oxidative stress","type":"related"}],"termid":"GO:1903204"}


id: PBO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRI subfamily","termid":"PBO:0000685"}


id: GO:0060717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a chorion from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The chorion is an extraembryonic membrane.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion development","termid":"GO:0060717"}


id: FYPO:0006669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell mates with two partners, leading to the fusion of three cells. The resulting zygote can then undergo sporulation to form an ascus containing more than four spores.","definition_xrefs":["PomBase:mah","PMID:30089908"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mating between three cells","synonyms":[{"name":"abnormal conjugation between three cells","type":"exact"},{"name":"abnormal mating among three cells","type":"exact"}],"termid":"FYPO:0006669"}


id: GO:0034371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:expert_pt","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chylomicron remodeling","synonyms":[{"name":"chylomicron remnant formation","type":"related"},{"name":"chylomicron remodelling","type":"exact"}],"termid":"GO:0034371"}


id: PR:Q09739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic nuclear division protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.03","secondary_identifiers":["UniProtKB:Q09739"],"synonyms":[{"name":"Spom972h-MND1","type":"exact"},{"name":"meiotically up-regulated gene 32 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09739"}


id: GO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing by host of symbiont cells","secondary_identifiers":["GO:0051852"],"synonyms":[{"name":"disruption by host of symbiont cells","type":"broad"}],"termid":"GO:0051873"}


id: GO:0051029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of rRNA, ribosomal ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"rRNA transport","termid":"GO:0051029"}


id: GO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-methylmalonyl-CoA = (S)-methylmalonyl-CoA.","definition_xrefs":["EC:5.1.99.1","RHEA:20553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylmalonyl-CoA epimerase activity","secondary_identifiers":["Reactome:R-HSA-71020","KEGG_REACTION:R02765","MetaCyc:METHYLMALONYL-COA-EPIM-RXN"],"synonyms":[{"name":"2-methyl-3-oxopropanoyl-CoA 2-epimerase activity","type":"related"},{"name":"DL-methylmalonyl-CoA racemase activity","type":"related"},{"name":"methylmalonyl coenzyme A racemase activity","type":"related"},{"name":"methylmalonyl-CoA 2-epimerase activity","type":"related"},{"name":"methylmalonyl-CoA racemase activity","type":"related"}],"termid":"GO:0004493"}


id: PBO:0076709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 7 like 2","termid":"PBO:0076709"}


id: GO:1901395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta2 activation (obsolete GO:1901395)","synonyms":[{"name":"regulation of TGF-beta 2 activation","type":"exact"},{"name":"regulation of TGFB2 activation","type":"exact"},{"name":"regulation of TGFbeta 2 activation","type":"exact"}],"termid":"GO:1901395"}


id: MOD:00702
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms or groups containing isotopes that are not the most common.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope labeled residue","synonyms":[{"name":"IsoTagRes","type":"exact"},{"name":"SILAC","type":"exact"}],"termid":"MOD:00702"}


id: PBO:0005300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA guanylyltransferase (predicted)","termid":"PBO:0005300"}


id: GO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that converts synaptic vesicles to a state of competence for calcium triggered fusion with the active zone membrane by bringing the two membranes into very close proximity. Priming typically (but not always) occurs after docking (Jahn and Fasshauer, 2012). Primed vesicles are also capable of spontaneously fusing with the active zone membrane.","definition_xrefs":["PMID:15217342","PMID:23060190","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0065003","GO:0008150","GO:0006810","GO:0023052","GO:0044085"],"is_obsolete":false,"name":"synaptic vesicle priming","termid":"GO:0016082"}


id: PBO:0088295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyrimidine nucleotide Rim2","termid":"PBO:0088295"}


id: GO:0009152
data:
  {"annotated_genes":["SJAG_02598","SJAG_07003","SJAG_01814","SJAG_00982","SJAG_01859","SJAG_04007","SJAG_03731","SJAG_06634","SJAG_02741","SJAG_04288","SJAG_04627","SJAG_03313","SJAG_02038","SJAG_05204","SJAG_00427","SJAG_01298","SJAG_04634","SJAG_MIT15","SJAG_02105","SJAG_00133","SJAG_02850","SJAG_01661","SJAG_01139","SJAG_00964","SJAG_03140","SJAG_03355","SJAG_05277","SJAG_MIT37","SJAG_MIT09","SJAG_00915","SJAG_00985","SJAG_01070","SJAG_01081","SJAG_03925","SJAG_00836","SJAG_01471","SJAG_00542","SJAG_04422","SJAG_03114","SJAG_02887","SJAG_00438","SJAG_00866","SJAG_02564","SJAG_03064","SJAG_02364","SJAG_04849","SJAG_01402","SJAG_02006","SJAG_00044","SJAG_03290","SJAG_04122","SJAG_04681","SJAG_04123","SJAG_02158"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106406],"is_not":false,"summary":null,"term":"GO:0009152"},{"annotations":[84990,99480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[106293,95624,114978,106404,110543,113374,93876,99481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[94448,89315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[95087,104637,114464,91076,110279,83544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[94199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[112876,89605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[110879,113081,88293,85480,106648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[59001,97242,104315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[98292,104316,96124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[114979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[89827,97866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[103516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[66416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[101038,99091,115054,89939,97869,88914,99713,111884,90913,115059,99742,103856,115063,103946,85235,104832,89339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114011],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[89829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic 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ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleotide anabolism","type":"exact"},{"name":"purine ribonucleotide biosynthesis","type":"exact"},{"name":"purine ribonucleotide formation","type":"exact"},{"name":"purine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009152","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006188":null,"GO:0006189":null,"GO:0009152":null,"GO:0015937":null,"GO:0015986":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0035338":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:1905706":null,"GO:1990181":null,"GO:2001295":null}}


id: PBO:0072951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase cancer associated transcript 2","termid":"PBO:0072951"}


id: GO:0007413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of axons into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"},{"relation_name":"is_a","term_name":"neuron projection fasciculation","termid":"GO:0106030"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonal fasciculation","synonyms":[{"name":"fasciculation of neuron","type":"related"}],"termid":"GO:0007413"}


id: PATO:0000862
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000862 pupillary reflex value (obsolete PATO:0000862)","termid":"PATO:0000862"}


id: PR:O13656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import receptor subunit TOM40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02828","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.13","secondary_identifiers":["UniProtKB:O13656"],"synonyms":[{"name":"Spom972h-TOMM40","type":"exact"},{"name":"translocase of outer membrane 40 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13656"}


id: GO:0045760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"positively_regulates","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of action potential","synonyms":[{"name":"activation of action potential","type":"narrow"},{"name":"stimulation of action potential","type":"narrow"},{"name":"up regulation of action potential","type":"exact"},{"name":"up-regulation of action potential","type":"exact"},{"name":"upregulation of action potential","type":"exact"}],"termid":"GO:0045760"}


id: GO:0051370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to Z-band alternatively spliced PDZ motif protein (ZASP). ZASP is a Z-band protein specifically expressed in heart and skeletal muscle. This protein contains N-terminal PDZ domain and C-terminal LIM domain.","definition_xrefs":["PMID:10427098","PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ZASP binding (obsolete GO:0051370)","synonyms":[{"name":"Z-band alternatively spliced PDZ-motif protein binding","type":"exact"},{"name":"ZASP binding","type":"exact"}],"termid":"GO:0051370"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: PBO:0072555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding A pseudogene 1","termid":"PBO:0072555"}


id: PATO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000118 absolute size (obsolete PATO:0000118)","termid":"PATO:0000118"}


id: GO:1905618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of miRNA-mediated gene silencing by inhibition of translation.","definition_xrefs":["GOC:bc","GOC:TermGenie","GOC:PARL","GO_REF:0000058","PMID:23409027"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of miRNA-mediated gene silencing by inhibition of translation (obsolete GO:1905618)","synonyms":[{"name":"activation of down regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of down-regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of downregulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of gene silencing by miRNA, negative regulation of translation","type":"narrow"},{"name":"activation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of miRNA mediated inhibition of translation","type":"narrow"},{"name":"activation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"activation of negative regulation of translation involved in gene silencing by microRNA","type":"narrow"},{"name":"positive regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"positive regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"positive regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"positive regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"positive regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"up regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"up regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"up regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"up regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"up regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"up-regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"up-regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"up-regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"up-regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"up-regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"upregulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"upregulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"upregulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"upregulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"upregulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1905618"}


id: PBO:0081053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCCHC10 pseudogene 1","termid":"PBO:0081053"}


id: GO:0009901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dehiscence of an anther to release the pollen grains contained within it.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehiscence","termid":"GO:0009900"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther dehiscence","termid":"GO:0009901"}


id: PATO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000846 auditory threshold (obsolete PATO:0000846)","termid":"PATO:0000846"}


id: PBO:0004583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication endonuclease-helicase Dna2","termid":"PBO:0004583"}


id: PBO:0056396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 3","termid":"PBO:0056396"}


id: PBO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B","termid":"PBO:0051940"}


id: GO:0034109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a second cell of the identical type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"homotypic cell-cell adhesion","termid":"GO:0034109"}


id: FYPO:0000716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to valinomycin. Cells stop growing (and may die) at a concentration of valinomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to valinomycin","synonyms":[{"name":"hypersensitive to valinomycin","type":"exact"},{"name":"sensitive to valinomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to valinomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000716"}


id: PR:P79071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10715:SF0","OMA:SCHPO04682","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.18","secondary_identifiers":["UniProtKB:P79071"],"synonyms":[{"name":"Spom972h-RPL6","type":"exact"}],"termid":"PR:P79071"}


id: GO:0050545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfopyruvate + H+ = CO2 + sulfoacetaldehyde.","definition_xrefs":["EC:4.1.1.79","RHEA:20948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sulfopyruvate decarboxylase activity","secondary_identifiers":["MetaCyc:R231-RXN","KEGG_REACTION:R05774"],"synonyms":[{"name":"sulfopyruvate carboxy-lyase (2-sulfoacetaldehyde-forming)","type":"related"},{"name":"sulfopyruvate carboxy-lyase activity","type":"related"},{"name":"sulphopyruvate decarboxylase activity","type":"exact"}],"termid":"GO:0050545"}


id: FYPO:0003202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is not spatially and temporally coupled to division septum assembly as in wild type. The edges of the growing septum and the plasma membrane do not remain in contact, and septum assembly may be slower than ring contraction.","definition_xrefs":["PomBase:mah","PMID:24165938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"actomyosin contractile ring contraction uncoupled from septum assembly","synonyms":[{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring contraction uncoupled from septum assembly","type":"exact"}],"termid":"FYPO:0003202"}


id: PBO:0038651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 1","termid":"PBO:0038651"}


id: SOFP:feature_property
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A general purpose relation between a biological feature and some value","definition_xrefs":["so:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_property","termid":"SOFP:feature_property"}


id: PBO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing","termid":"PBO:0002475"}


id: FYPO:0006414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during interphase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:17452352","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic interphase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic interphase","type":"related"},{"name":"increased level of histone gene RNA during mitotic interphase","type":"exact"},{"name":"increased level of histone gene mRNA during interphase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic interphase","type":"exact"}],"termid":"FYPO:0006414"}


id: GO:0015135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucuronate from one side of a membrane to the other. Glucuronate is the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}


id: PBO:0062892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L mitochondrial inner membrane protein","termid":"PBO:0062892"}


id: PBO:0087044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L20B; homologous to mammalian ribosomal protein L18A, no bacterial homolog; RPL20B has a paralog, RPL20A, that arose from the whole genome duplication","termid":"PBO:0087044"}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: PBO:0015238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractie ring myosin V regulator Rng8","termid":"PBO:0015238"}


id: GO:0004299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at peptide bonds with very broad specificity.","definition_xrefs":["EC:3.4.25.1"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase activity (obsolete GO:0004299)","synonyms":[{"name":"multicatalytic endopeptidase","type":"related"},{"name":"proteasome","type":"related"},{"name":"proteasome endopeptidase activity","type":"exact"},{"name":"proteasome endopeptidase complex","type":"related"}],"termid":"GO:0004299"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: PBO:0058624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6756","termid":"PBO:0058624"}


id: PBO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like exosome 3'-5' exoribonuclease","termid":"PBO:0045028"}


id: PBO:0111421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo5","termid":"PBO:0111421"}


id: PBO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA1-like protein","termid":"PBO:0002127"}


id: GO:0003865
data:
  {"annotated_genes":["SJAG_02291","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96061,96716],"is_not":false,"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor.","definition_xrefs":["EC:1.3.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","termid":"GO:0033765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02291":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9705714","RHEA:13805","MetaCyc:1.3.99.5-RXN","Reactome:R-HSA-469659","Reactome:R-HSA-9705713"],"synonyms":[{"name":"3-keto-delta4-steroid-5alpha-reductase activity","type":"related"},{"name":"3-oxo-5alpha-steroid 4-dehydrogenase activity","type":"related"},{"name":"3-oxo-5alpha-steroid delta4-dehydrogenase activity","type":"related"},{"name":"3-oxo-5alpha-steroid:(acceptor) delta4-oxidoreductase activity","type":"related"},{"name":"3-oxo-5alpha-steroid:acceptor delta4-oxidoreductase activity","type":"related"},{"name":"3-oxosteroid delta4-dehydrogenase","type":"broad"},{"name":"4-ene-3-ketosteroid-5alpha-oxidoreductase activity","type":"related"},{"name":"5alpha-reductase","type":"broad"},{"name":"delta4-3-keto steroid 5alpha-reductase activity","type":"related"},{"name":"delta4-3-ketosteroid5alpha-oxidoreductase activity","type":"related"},{"name":"delta4-3-oxo steroid reductase activity","type":"related"},{"name":"delta4-3-oxosteroid-5alpha-reductase","type":"broad"},{"name":"delta4-5alpha-dehydrogenase activity","type":"related"},{"name":"steroid 5 alpha reductase","type":"broad"},{"name":"steroid 5-alpha-reductase activity","type":"broad"},{"name":"steroid 5alpha-reductase","type":"broad"},{"name":"steroid delta4-5alpha-reductase activity","type":"related"},{"name":"testosterone 5alpha-reductase","type":"broad"}],"termid":"GO:0003865","terms_by_termid":{"GO:0003865":null}}


id: GO:1990088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a [methyl-Co(III) methanol-specific corrinoid protein] + coenzyme M = methyl-coenzyme M + a [Co(I) methanol-specific corrinoid protein] + H+.","definition_xrefs":["PMID:10077852","GOC:hjd","RHEA:45208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"[methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase","secondary_identifiers":["GO:0043851","EC:2.1.1.246","MetaCyc:RXN-8096"],"synonyms":[{"name":"methanol-specific methylcobalamin: coenzyme M methyltransferase activity","type":"exact"},{"name":"methanol-specific methylcobalamin:CoM methyltransferase activity","type":"exact"},{"name":"methanol-specific methylcobalamin:coenzyme M methyltransferase activity","type":"exact"},{"name":"methylcobamide:CoM methyltransferase activity","type":"broad"},{"name":"methylcobamide:coenzyme M methyltransferase activity","type":"broad"}],"termid":"GO:1990088"}


id: GO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction organization","synonyms":[{"name":"cell junction assembly and maintenance","type":"exact"},{"name":"cell junction biogenesis","type":"related"},{"name":"cell junction organisation","type":"exact"}],"termid":"GO:0034330"}


id: PBO:0051767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IPO9 antisense RNA 1","termid":"PBO:0051767"}


id: GO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpenoid metabolic process","synonyms":[{"name":"monoterpenoid metabolism","type":"exact"}],"termid":"GO:0016098"}


id: GO:0044532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism modulates the frequency, rate or extent of apoptosis in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of apoptotic process in another organism","synonyms":[{"name":"modulation of apoptotic process in other organism","type":"exact"},{"name":"regulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044532"}


id: PBO:0042175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 5","termid":"PBO:0042175"}


id: PBO:0068676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 57, pseudogene","termid":"PBO:0068676"}


id: GO:1904644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a curcumin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24755072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to curcumin","termid":"GO:1904643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to curcumin","termid":"GO:1904644"}


id: PBO:0005427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf3","termid":"PBO:0005427"}


id: FYPO:0003129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation","termid":"FYPO:0003483"},{"relation_name":"is_a","term_name":"loss of punctate nuclear protein localization","termid":"FYPO:0005863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation","synonyms":[{"name":"abolished punctate nuclear protein localization during cellular response to ionizing radiation","type":"exact"},{"name":"loss of punctate nuclear protein localisation during cellular response to ionising radiation","type":"exact"},{"name":"loss of punctate nuclear protein localization during cellular response to IR","type":"exact"},{"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003129"}


id: PBO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase Slm3 (predicted)","termid":"PBO:0018232"}


id: GO:1904978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome organization.","definition_xrefs":["GOC:pad","PMID:22511594","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosome organization","synonyms":[{"name":"regulation of endosome organisation","type":"exact"},{"name":"regulation of endosome organization and biogenesis","type":"related"}],"termid":"GO:1904978"}


id: PBO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma E, pseudogene","termid":"PBO:0043960"}


id: PBO:0079103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC complex subunit 1","termid":"PBO:0079103"}


id: GO:0034889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan hemisulfate + H2O = endosulfan monoalcohol + 2 H+ + sulfate.","definition_xrefs":["UM-BBD_reactionID:r1384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"endosulfan hemisulfate sulfatase activity","termid":"GO:0034889"}


id: PBO:0065716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pvt1 oncogene","termid":"PBO:0065716"}


id: PBO:0080295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 59 pseudogene","termid":"PBO:0080295"}


id: PBO:0055176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2600","termid":"PBO:0055176"}


id: PBO:0081041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZC3H18 antisense RNA 1 (head to head)","termid":"PBO:0081041"}


id: GO:0046326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucose transmembrane transport","termid":"GO:0010828"},{"relation_name":"is_a","term_name":"regulation of glucose import","termid":"GO:0046324"},{"relation_name":"positively_regulates","term_name":"glucose import","termid":"GO:0046323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of glucose import","synonyms":[{"name":"activation of glucose import","type":"narrow"},{"name":"positive regulation of glucose uptake","type":"exact"},{"name":"stimulation of glucose import","type":"narrow"},{"name":"up regulation of glucose import","type":"exact"},{"name":"up-regulation of glucose import","type":"exact"},{"name":"upregulation of glucose import","type":"exact"}],"termid":"GO:0046326"}


id: GO:1901531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hypochlorite.","definition_xrefs":["GOC:TermGenie","PMID:22223481","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hypochlorite binding","termid":"GO:1901531"}


id: SO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a transcription factor binding site.","definition_xrefs":["EBI:fc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_variant","termid":"SO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TF_binding_site_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:tf_binding_site_variant","type":"exact"},{"name":"TF binding site variant","type":"exact"},{"name":"VEP:TF_binding_site_variant","type":"exact"}],"termid":"SO:0001782"}


id: PBO:0068154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 461","termid":"PBO:0068154"}


id: GO:0090740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the pigment granule membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:11294610"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of pigment granule membrane (obsolete GO:0090740)","termid":"GO:0090740"}


id: GO:0010548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thylakoid membrane disassembly.","definition_xrefs":["GOC:tb","GOC:dph","PMID:17416733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane disassembly","termid":"GO:0010549"},{"relation_name":"regulates","term_name":"thylakoid membrane disassembly","termid":"GO:0010547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of thylakoid membrane disassembly","synonyms":[{"name":"regulation of thylakoid membrane degradation","type":"exact"}],"termid":"GO:0010548"}


id: PBO:0054685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2093","termid":"PBO:0054685"}


id: GO:0071817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the proteins MMS19, MIP18 and XPD, localizes to mitotic spindle during mitosis, and is required for proper chromosome segregation.","definition_xrefs":["PMID:20797633","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"MMXD complex","synonyms":[{"name":"MMS19-MIP18-XPD complex","type":"exact"}],"termid":"GO:0071817"}


id: GO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall cellulose (obsolete GO:0052408)","termid":"GO:0052408"}


id: GO:2001245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"regulates","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylcholine biosynthetic process","synonyms":[{"name":"regulation of phosphatidylcholine anabolism","type":"exact"},{"name":"regulation of phosphatidylcholine biosynthesis","type":"exact"},{"name":"regulation of phosphatidylcholine formation","type":"exact"},{"name":"regulation of phosphatidylcholine synthesis","type":"exact"}],"termid":"GO:2001245"}


id: PBO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase epsilon subunit Ost2 (predicted)","termid":"PBO:0001705"}


id: GO:0019199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0038023","GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"transmembrane receptor protein kinase activity","secondary_identifiers":["Reactome:R-HSA-8983059","Reactome:R-HSA-8983063"],"termid":"GO:0019199"}


id: PBO:0059083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON1 homolog A, secretory trafficking associated","termid":"PBO:0059083"}


id: PBO:0049362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 21","termid":"PBO:0049362"}


id: GO:1903421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:22745285","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle recycling","synonyms":[{"name":"regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903421"}


id: PBO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog (predicted)","termid":"PBO:0002183"}


id: PBO:0026668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_phase_transition","termid":"PBO:0026668"}


id: PR:G2TRT9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.16 gene.","definition_xrefs":["UniProtKB:G2TRT9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.16","synonyms":[{"name":"Spom972h-SPCC794.16","type":"exact"}],"termid":"PR:G2TRT9"}


id: GO:1900716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of violaceol II biosynthetic process","synonyms":[{"name":"regulation of violaceol II anabolism","type":"exact"},{"name":"regulation of violaceol II biosynthesis","type":"exact"},{"name":"regulation of violaceol II formation","type":"exact"},{"name":"regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900716"}


id: PBO:0017961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor Mti3 (predicted)","termid":"PBO:0017961"}


id: PBO:0044893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 5, GATOR1 subcomplex subunit","termid":"PBO:0044893"}


id: GO:0106215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus.","definition_xrefs":["PMID:26195667","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"negatively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106215"}


id: GO:0030669
data:
  {"annotated_genes":["SJAG_00800","SJAG_02805","SJAG_00104","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107630,92334,104376,107689],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated endocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-coated endocytic vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030669","terms_by_termid":{"GO:0030122":null}}


id: GO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of xylan in other organism involved in symbiotic interaction (obsolete GO:0052366)","synonyms":[{"name":"catabolism by organism of xylan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052366"}


id: SO:1001196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A maxicircle gene so extensively edited that it cannot be matched to its edited mRNA sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cryptic","termid":"SO:0000976"},{"relation_name":"is_a","term_name":"maxicircle_gene","termid":"SO:0000654"},{"relation_name":"is_a","term_name":"cryptic_gene","termid":"SO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptogene","termid":"SO:1001196"}


id: PBO:0084863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; also predicted to be an S-adenosylmethionine-dependent RNA methyltransferase","termid":"PBO:0084863"}


id: GO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H dehydrogenase (obsolete GO:0008751)","synonyms":[{"name":"NAD(P)H dehydrogenase","type":"exact"}],"termid":"GO:0008751"}


id: FYPO:0004029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 5' deoxyribonuclease (pyrimidine dimer) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"},{"relation_name":"is_a","term_name":"abolished endodeoxyribonuclease activity","termid":"FYPO:0007141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000002","FYPO:0000652","FYPO:0005447","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished 5' deoxyribonuclease (pyrimidine dimer) activity","synonyms":[{"name":"5' deoxyribonuclease (pyrimidine dimer) activity abolished","type":"exact"}],"termid":"FYPO:0004029"}


id: GO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(4-hydroxyphenyl)-2-aminoethanol = (4-hydroxyphenyl)acetaldehyde + NH4.","definition_xrefs":["RHEA:18173","EC:4.2.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"octopamine dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03358","MetaCyc:OCTOPAMINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"octopamine hydro-lyase (deaminating)","type":"related"},{"name":"octopamine hydro-lyase [deaminating; (4-hydroxyphenyl)acetaldehyde-forming]","type":"related"},{"name":"octopamine hydrolyase activity","type":"related"}],"termid":"GO:0050202"}


id: PR:Q92339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity gluconate transporter ght3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.01","synonyms":[{"name":"Spom972h-ght3","type":"exact"},{"name":"hexose transporter 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92339"}


id: PBO:0080718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and SOCS box containing 2","termid":"PBO:0080718"}


id: PBO:0067216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 283, pseudogene","termid":"PBO:0067216"}


id: FYPO:0000760
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115399,115402],"is_not":false,"summary":null,"term":"FYPO:0000760"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000301"],"is_obsolete":false,"name":"normal mating","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"normal conjugation","type":"exact"},{"name":"normal conjugation with cellular fusion","type":"exact"},{"name":"normal zygote formation","type":"related"}],"termid":"FYPO:0000760","terms_by_termid":{"FYECO:0000015":null,"FYPO:0000760":null}}


id: GO:2000869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of estrone secretion","termid":"GO:2000867"},{"relation_name":"positively_regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of estrone secretion","synonyms":[{"name":"positive regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"positive regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000869"}


id: GO:0036102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene B4 metabolic process","synonyms":[{"name":"LTB4 metabolism","type":"exact"}],"termid":"GO:0036102"}


id: PBO:0040247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4B cysteine peptidase","termid":"PBO:0040247"}


id: PBO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 9","termid":"PBO:0043448"}


id: PBO:0039944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 4A","termid":"PBO:0039944"}


id: PBO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 13","termid":"PBO:0070547"}


id: FYPO:0003776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased pseudohyphal growth","synonyms":[{"name":"increased filamentous growth","type":"broad"}],"termid":"FYPO:0003776"}


id: FYPO:0006977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein ubiquitination","synonyms":[{"name":"abnormal protein ubiquitinylation","type":"related"},{"name":"abnormal protein ubiquitylation","type":"exact"}],"termid":"FYPO:0006977"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: GO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a linear element. A linear element is a proteinaceous scaffold associated with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["PMID:19756689","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to condensed nuclear chromosome","termid":"GO:1903084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to linear element","synonyms":[{"name":"protein localisation to linear element","type":"exact"}],"termid":"GO:0036181"}


id: PBO:0110479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lncRNA metabolic regulator 1","termid":"PBO:0110479"}


id: PBO:0051455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 6-57","termid":"PBO:0051455"}


id: PBO:0057646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1238","termid":"PBO:0057646"}


id: FYPO:0007308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002382"},{"relation_name":"is_a","term_name":"increased histone H4-K5 acetylation at centromere during vegetative growth","termid":"FYPO:0007305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K5 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K5 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K5 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007308"}


id: PBO:0069768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1051, pseudogene","termid":"PBO:0069768"}


id: GO:0047796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexane-1,3-dione + H2O = 5-oxohexanoate + H+.","definition_xrefs":["RHEA:16473","EC:3.7.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cyclohexane-1,3-dione hydrolase activity","secondary_identifiers":["MetaCyc:CYCLOHEXANE-13-DIONE-HYDROLASE-RXN","KEGG_REACTION:R03211"],"synonyms":[{"name":"1,3-cyclohexanedione hydrolase activity","type":"related"},{"name":"cyclohexane-1,3-dione acylhydrolase (decyclizing)","type":"related"}],"termid":"GO:0047796"}


id: PR:O60060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbamoyl-phosphate synthase small chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03990","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase arginine-specific small chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.09c","secondary_identifiers":["UniProtKB:O60060"],"synonyms":[{"name":"CPS-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-carA","type":"exact"},{"name":"arginine-specific carbamoyl-phosphate synthetase, glutamine chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60060"}


id: PBO:0067299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 384, pseudogene","termid":"PBO:0067299"}


id: PBO:0087684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the multiprotein cohesin complex; required for sister chromatid cohesion in mitotic cells; also required, with Rec8p, for cohesion and recombination during meiosis; phylogenetically conserved SMC chromosomal ATPase family member","termid":"PBO:0087684"}


id: PBO:0067054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 75, pseudogene","termid":"PBO:0067054"}


id: GO:0008556
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108392],"is_not":false,"summary":null,"term":"GO:0008556"},{"annotations":[108393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + K+(out) = ADP + phosphate + K+(in).","definition_xrefs":["RHEA:16777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type potassium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-2","GO:0015618","EC:7.2.2.6"],"synonyms":[{"name":"ATP phosphohydrolase (K+-importing)","type":"related"},{"name":"ATP-dependent potassium transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled potassium transmembrane transporter activity","type":"related"},{"name":"K(+)-importing ATPase activity","type":"narrow"},{"name":"K(+)-transporting ATPase activity","type":"related"},{"name":"K+-importing ATPase activity","type":"related"},{"name":"K+-transporting ATPase activity","type":"exact"},{"name":"potassium ABC transporter","type":"narrow"},{"name":"potassium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"potassium transporting ATPase activity","type":"exact"},{"name":"potassium-importing ATPase activity","type":"narrow"},{"name":"potassium-transporting ATPase activity","type":"exact"},{"name":"potassium-uptake-ATPase activity","type":"exact"}],"termid":"GO:0008556","terms_by_termid":{"GO:0008556":null,"GO:0008900":null}}


id: PR:Q9UT09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP8A3.07c gene.","definition_xrefs":["UniProtKB:Q9UT09","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.07c","synonyms":[{"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAHP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAP8A3.07c","type":"exact"},{"name":"phospho-2-keto-3-deoxyheptonate aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT09"}


id: PBO:0049476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.0 linker histone","termid":"PBO:0049476"}


id: GO:1900889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pentadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentadecane biosynthetic process","termid":"GO:1900887"},{"relation_name":"is_a","term_name":"positive regulation of pentadecane metabolic process","termid":"GO:1900892"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"pentadecane biosynthetic process","termid":"GO:1900634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pentadecane biosynthetic process","synonyms":[{"name":"activation of pentadecane anabolism","type":"narrow"},{"name":"activation of pentadecane biosynthesis","type":"narrow"},{"name":"activation of pentadecane biosynthetic process","type":"narrow"},{"name":"activation of pentadecane formation","type":"narrow"},{"name":"activation of pentadecane synthesis","type":"narrow"},{"name":"positive regulation of pentadecane anabolism","type":"related"},{"name":"positive regulation of pentadecane biosynthesis","type":"related"},{"name":"positive regulation of pentadecane formation","type":"related"},{"name":"positive regulation of pentadecane synthesis","type":"related"},{"name":"up regulation of pentadecane anabolism","type":"related"},{"name":"up regulation of pentadecane biosynthesis","type":"related"},{"name":"up regulation of pentadecane biosynthetic process","type":"exact"},{"name":"up regulation of pentadecane formation","type":"related"},{"name":"up regulation of pentadecane synthesis","type":"related"},{"name":"up-regulation of pentadecane anabolism","type":"related"},{"name":"up-regulation of pentadecane biosynthesis","type":"related"},{"name":"up-regulation of pentadecane biosynthetic process","type":"exact"},{"name":"up-regulation of pentadecane formation","type":"related"},{"name":"up-regulation of pentadecane synthesis","type":"related"},{"name":"upregulation of pentadecane anabolism","type":"related"},{"name":"upregulation of pentadecane biosynthesis","type":"related"},{"name":"upregulation of pentadecane biosynthetic process","type":"exact"},{"name":"upregulation of pentadecane formation","type":"related"},{"name":"upregulation of pentadecane synthesis","type":"related"}],"termid":"GO:1900889"}


id: GO:0018407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The iodination of peptidyl-thyronine to form peptidyl-3',3'',5'-triiodo-L-thyronine (triiodothyronine).","definition_xrefs":["RESID:AA0177"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-thyronine iodination to form 3',3'',5'-triiodo-L-thyronine (obsolete GO:0018407)","synonyms":[{"name":"peptidyl-thyronine iodination to form triiodothyronine","type":"broad"}],"termid":"GO:0018407"}


id: PBO:0050165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 21","termid":"PBO:0050165"}


id: GO:0048619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindgut are generated and organized, during the embryonic phase.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"hindgut morphogenesis","termid":"GO:0007442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hindgut morphogenesis","termid":"GO:0048619"}


id: GO:1901568
data:
  {"annotated_genes":["SJAG_03471","SJAG_00881","SJAG_04007","SJAG_03909","SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[101634,109464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[102027,111820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00881":null,"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid derivative metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative metabolism","type":"exact"}],"termid":"GO:1901568","terms_by_termid":{"GO:0009089":null,"GO:0035336":null,"GO:0035338":null}}


id: PBO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_degradation","termid":"PBO:0034548"}


id: GO:0052332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular membrane of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of membrane in other organism involved in symbiotic interaction (obsolete GO:0052332)","synonyms":[{"name":"modification by organism of cell membrane in other organism during symbiotic interaction","type":"related"},{"name":"modification by organism of cell membrane in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052332"}


id: PBO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint kinase Bub1","termid":"PBO:0018175"}


id: PATO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000693 late (obsolete PATO:0000693)","termid":"PATO:0000693"}


id: GO:0099029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of presynaptic active zone membrane (obsolete GO:0099029)","termid":"GO:0099029"}


id: GO:0035953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dipeptide transport, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17005992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035953)","synonyms":[{"name":"regulation of dipeptide transport by regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035953"}


id: PBO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide-quinone oxidoreductase","termid":"PBO:0004116"}


id: PBO:0083148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF PCI8/YIL071C","termid":"PBO:0083148"}


id: MOD:00067
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-D-glucuronoylglycine.","definition_xrefs":["PubMed:6493057","RESID:AA0058","PubMed:7398618","PubMed:10858503","PubMed:12716131","OMSSA:50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glucuronylated residue","termid":"MOD:00447"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-D-glucuronoylglycine","synonyms":[{"name":"2-(glucuronoylamino)ethanoic acid","type":"exact"},{"name":"Glucuronyl","type":"related"},{"name":"MOD_RES N-D-glucuronoyl glycine","type":"exact"},{"name":"N-D-glucuronoyl-glycine","type":"exact"},{"name":"N-D-glucuronyl-glycine","type":"exact"},{"name":"NGlcAGly","type":"exact"},{"name":"ntermpepglucuronylg","type":"exact"}],"termid":"MOD:00067"}


id: PBO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition","termid":"PBO:0031802"}


id: PBO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derived_by_descent_from","termid":"PBO:0034349"}


id: GO:0046075
data:
  {"annotated_genes":["SJAG_04657","SJAG_04665","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114031,88507,85482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTTP, deoxyribosylthymine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dTTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTTP metabolism","type":"exact"}],"termid":"GO:0046075","terms_by_termid":{"GO:0006235":null}}


id: GO:0009931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"calcium-dependent protein kinase activity","termid":"GO:0010857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301","GO:0140096","GO:0004672"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}


id: PATO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000698 floury (obsolete PATO:0000698)","termid":"PATO:0000698"}


id: PBO:0038370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulated_by","termid":"PBO:0038370"}


id: PR:Q9URV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 2 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.08c","synonyms":[{"name":"Spom972h-mug2","type":"exact"}],"termid":"PR:Q9URV3"}


id: SO:0000832
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is part of a promoter.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000832 promoter_region (obsolete SO:0000832)","termid":"SO:0000832"}


id: PR:000046670
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe sre2 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor sre2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"Spom-sre2","type":"exact"},{"name":"sterol regulatory element-binding protein 2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046670"}


id: FYPO:0000056
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria have fused into fewer and larger structures than normal, or failed to undergo fission.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mitochondria fused","synonyms":[{"name":"fused mitochondria","type":"exact"},{"name":"mitochondria fused during mitotic cell cycle","type":"related"},{"name":"mitochondria fused during vegetative growth","type":"exact"}],"termid":"FYPO:0000056"}


id: PBO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 135","termid":"PBO:0075085"}


id: PR:Q10286
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proton myo-inositol cotransporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.15","secondary_identifiers":["UniProtKB:Q10286"],"synonyms":[{"name":"SPAC4F8.15","type":"related"},{"name":"Spom972h-SLC2A13","type":"exact"}],"termid":"PR:Q10286"}


id: PBO:0038607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACBD3 antisense RNA 1","termid":"PBO:0038607"}


id: PR:O74815
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk27 gene.","definition_xrefs":["UniProtKB:O74815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.04","synonyms":[{"name":"Spom972h-ppk27","type":"exact"}],"termid":"PR:O74815"}


id: PBO:0091760
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, antisense to Mat1-Mi","termid":"PBO:0091760"}


id: GO:0036115
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id: GO:1902356
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  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63896],"is_not":false,"summary":null,"term":"GO:1902356"},{"annotations":[84532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The directed movement of oxaloacetate(2-) across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:18682385","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate transport","termid":"GO:0015729"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"oxaloacetate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1902356","terms_by_termid":{"GO:1902356":null,"GO:1990555":null}}


id: GO:0034098
data:
  {"annotated_genes":["SJAG_04384","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85361,100024],"is_not":false,"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex required for the efficient dislocation of ER-lumenal degradation substrates, and their subsequent proteolysis by the proteasome. In budding yeast, this complex includes Cdc48p, Npl4p and Ufd1p proteins. In mammals, this complex includes a hexamer of VCP/p97 (a cytosolic ATPase) and trimers of each of its cofactors UFD1L and NPL4 (NPLOC4) (e.g. a 6:3:3 stoichiometry).","definition_xrefs":["PMID:11813000","PMID:16179952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737","GO:0032991","GO:0005789"],"is_obsolete":false,"name":"VCP-NPL4-UFD1 AAA ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex","type":"narrow"},{"name":"p97-Ufd1-Npl4 complex","type":"exact"}],"termid":"GO:0034098","terms_by_termid":{"GO:0034098":null}}


id: PBO:0052876
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-1","termid":"PBO:0052876"}


id: GO:0090207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of triglyceride metabolic process","termid":"GO:0090207"}


id: PBO:0108555
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor Cdt1","termid":"PBO:0108555"}


id: PBO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 129","termid":"PBO:0071127"}


id: PBO:0087923
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication","termid":"PBO:0087923"}


id: PBO:0061464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 0 group B member 2","termid":"PBO:0061464"}


id: GO:0016798
data:
  {"annotated_genes":["SJAG_00310","SJAG_01971","SJAG_04789","SJAG_04363","SJAG_00096","SJAG_01888","SJAG_02528","SJAG_02261","SJAG_00620","SJAG_02799","SJAG_02478","SJAG_01171","SJAG_05001","SJAG_05257","SJAG_04327","SJAG_04851","SJAG_02446","SJAG_02949","SJAG_03032","SJAG_04859","SJAG_01858","SJAG_04301","SJAG_04850","SJAG_01974","SJAG_01883","SJAG_01017","SJAG_05272","SJAG_01029","SJAG_02649","SJAG_02076","SJAG_03646","SJAG_02590","SJAG_00957","SJAG_04864","SJAG_02179","SJAG_03824","SJAG_02435","SJAG_03280","SJAG_01119","SJAG_03213","SJAG_03295","SJAG_04238","SJAG_00485","SJAG_03444","SJAG_02131","SJAG_02192","SJAG_00667","SJAG_01781","SJAG_03724","SJAG_04927","SJAG_02718","SJAG_02711"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101534],"is_not":false,"summary":null,"term":"GO:0016798"},{"annotations":[92220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[92221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[73228,90938,92222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"},{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003905"},{"annotations":[107552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004555"},{"annotations":[97649,97648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004558"},{"annotations":[113797,114339,90127,110042,100054,91290,90910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004556"},{"annotations":[96403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"},{"annotations":[92184,83746,92185,83747,83496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090599"},{"annotations":[84428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[112167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004564"},{"annotations":[104439,111659,83569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008422"},{"annotations":[97563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004568"},{"annotations":[112146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070694"},{"annotations":[97629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[73514,97630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[73519,97631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"},{"annotations":[83498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106407"},{"annotations":[95837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004573"},{"annotations":[99362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004339"},{"annotations":[85204,107356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051118"},{"annotations":[91177,90096,96201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[96202,90097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052861"},{"annotations":[90098,96203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052862"},{"annotations":[98004,98005,104117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[84404,98007,104118,98006,91178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"},{"annotations":[86692,90289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015926"},{"annotations":[102733,84811,94314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004553"},{"annotations":[97653,97652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032450"},{"annotations":[98299,93006,98311,98310,114774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[91789,66021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"},{"annotations":[86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070635"},{"annotations":[86751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070636"},{"annotations":[92225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008534"},{"annotations":[92226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000703"},{"annotations":[108216,86752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008477"},{"annotations":[90941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"},{"annotations":[94655,94656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106432"},{"annotations":[112168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"},{"annotations":[109951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"},{"annotations":[86753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045437"}]},"cv_nam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of the hydrolysis of any glycosyl bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase 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id: PBO:0077333
data:
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id: GO:0120236
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