# terms

id: GO:0102500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + a plant soluble heteroglycan = a plant soluble heteroglycan + maltose.","definition_xrefs":["GOC:pz","EC:2.4.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-maltose 4-alpha-glucanotransferase activity","secondary_identifiers":["MetaCyc:RXN-14354"],"termid":"GO:0102500"}


id: GO:0100057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates phenotypic switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100057)","termid":"GO:0100057"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: PBO:0050340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 42","termid":"PBO:0050340"}


id: GO:0071476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic response","termid":"GO:0006971"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic response","synonyms":[{"name":"cellular hypo-osmotic response","type":"exact"}],"termid":"GO:0071476"}


id: PBO:0090511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin chaperone involved protein complex assembly Uri1","termid":"PBO:0090511"}


id: GO:0000171
data:
  {"annotated_genes":["SJAG_03952","SJAG_04916","SJAG_02547","SJAG_01623","SJAG_03796","SJAG_01551","SJAG_00955","SJAG_06613","SJAG_03234","SJAG_03425","SJAG_02553","SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90855,92643,92934,95622,100670,100889,101772,101773,109616,111425,111509,114683],"is_not":false,"summary":null,"term":"GO:0000171"}]},"cv_name":"molecular_function","definition":"Catalysis of the site-specific cleavage of RNA by a catalytic RNA-mediated mechanism; substrates include the A3 site in the ITS1 of pre-rRNA.","definition_xrefs":["PMID:17881380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00955":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribonuclease MRP activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:RNase_MRP"],"synonyms":[{"name":"RNase MRP","type":"exact"}],"termid":"GO:0000171","terms_by_termid":{"GO:0000171":null}}


id: GO:0102382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rebaudioside B + UDP-alpha-D-glucose = rebaudioside A + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"rebaudioside B glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13518"],"termid":"GO:0102382"}


id: GO:0003397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite of a neuron in the amphid sensory organ.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration involved in dendrite retrograde extension","termid":"GO:0003395"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003397"}


id: PBO:0089976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP assembly factor Naf1","termid":"PBO:0089976"}


id: PBO:0045434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 2","termid":"PBO:0045434"}


id: SO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A light region between two darkly staining bands in a polytene chromosome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interband","synonyms":[{"name":"chromosome interband","type":"related"}],"termid":"SO:0000450"}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107017],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: GO:0031133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection size","termid":"GO:0032536"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon diameter","termid":"GO:0031133"}


id: PBO:0059704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 12","termid":"PBO:0059704"}


id: GO:0071077
data:
  {"annotated_genes":["SJAG_04325","SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[86994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"}]},"cv_name":"molecular_function","definition":"Enables the transfer of adenosine 3',5'-bisphosphate from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03452":null,"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 3',5'-diphosphate transporter activity","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0071077","terms_by_termid":{"GO:0008521":null,"GO:0015228":null}}


id: PBO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 27","termid":"PBO:0072498"}


id: PBO:0091154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase","termid":"PBO:0091154"}


id: GO:0045678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of R7 cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"is_a","term_name":"positive regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110117"},{"relation_name":"positively_regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R7 cell differentiation","synonyms":[{"name":"activation of R7 differentiation","type":"narrow"},{"name":"positive regulation of R7 differentiation","type":"exact"},{"name":"stimulation of R7 differentiation","type":"narrow"},{"name":"up regulation of R7 differentiation","type":"exact"},{"name":"up-regulation of R7 differentiation","type":"exact"},{"name":"upregulation of R7 differentiation","type":"exact"}],"termid":"GO:0045678"}


id: PBO:0059916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 2","termid":"PBO:0059916"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["GOC:bf","Wikipedia:Enkephalin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: PBO:0081245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 16","termid":"PBO:0081245"}


id: PBO:0050983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 52","termid":"PBO:0050983"}


id: PBO:0046185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 1","termid":"PBO:0046185"}


id: SO:0000659
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a transfer-messenger RNA (tmRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_encoding","synonyms":[{"name":"tmRNA encoding","type":"exact"}],"termid":"SO:0000659"}


id: GO:0030268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydromethanopterin + coenzyme F420 + 2 H+ = 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + reduced coenzyme F420.","definition_xrefs":["EC:1.5.98.1","RHEA:16721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylenetetrahydromethanopterin dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04456","MetaCyc:1.5.99.9-RXN","UM-BBD_reactionID:r0348","GO:0018536"],"synonyms":[{"name":"5,10-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"5,10-methylenetetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"N(5),N(10)-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"}],"termid":"GO:0030268"}


id: PBO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart disease","termid":"PBO:0004906"}


id: GO:2000443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"regulation of TLR21 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000443"}


id: GO:0018316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of two peptidyl-cysteine residues to form a peptidyl-L-cystine (dicysteine) in which segments of peptide chain are linked by a disulfide bond; the cross-link may be between different or the same peptide chain.","definition_xrefs":["RESID:AA0025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide cross-linking","termid":"GO:0018149"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking via L-cystine","termid":"GO:0018316"}


id: GO:0047161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymalonate + sinapoyl-CoA = CoA + sinapoyltartronate.","definition_xrefs":["RHEA:10952","EC:2.3.1.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tartronate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.106-RXN","KEGG_REACTION:R03965"],"synonyms":[{"name":"hydroxycinnamoyl-coenzyme-A:tartronate hydroxycinnamoyltransferase activity","type":"related"},{"name":"sinapoyl-CoA:2-hydroxymalonate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"tartronate sinapoyltransferase activity","type":"related"}],"termid":"GO:0047161"}


id: GO:0031146
data:
  {"annotated_genes":["SJAG_03651","SJAG_01022","SJAG_01068","SJAG_04573","SJAG_00651","SJAG_01617","SJAG_02162","SJAG_03219","SJAG_00341","SJAG_00192","SJAG_02591","SJAG_02651","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86769,90496,91690,93917,94600,98237,100702,100978,103345,105210,106450,111914,112967],"is_not":false,"summary":null,"term":"GO:0031146"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:15380083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00651":null,"SJAG_01022":null,"SJAG_01068":null,"SJAG_01617":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SCF-dependent proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"SCF-dependent proteasomal ubiquitin-dependent protein degradation","type":"exact"}],"termid":"GO:0031146","terms_by_termid":{"GO:0031146":null}}


id: PBO:0077243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 4","termid":"PBO:0077243"}


id: PBO:0028100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alcohol_dehydrogenase_activity","termid":"PBO:0028100"}


id: GO:0102802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thebaine + 2-oxoglutarate + O2 = neopinone + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["GOC:pz","EC:1.14.11.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"thebaine 6-O-demethylase activity","secondary_identifiers":["MetaCyc:RXN-8151","MetaCyc:RXN-8147","RHEA:27477"],"termid":"GO:0102802"}


id: PBO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM like Rab escort protein","termid":"PBO:0043020"}


id: GO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nematode pharynx are generated and organized.","definition_xrefs":["PMID:20805556","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx morphogenesis","termid":"GO:0110040"}


id: GO:0008168
data:
  {"annotated_genes":["SJAG_04736","SJAG_03877","SJAG_02271","SJAG_03367","SJAG_01434","SJAG_02417","SJAG_02350","SJAG_02290","SJAG_01079","SJAG_05225","SJAG_05334","SJAG_00722","SJAG_03869","SJAG_02637","SJAG_02659","SJAG_00943","SJAG_02868","SJAG_02099","SJAG_01054","SJAG_02281","SJAG_04642","SJAG_04627","SJAG_02973","SJAG_00832","SJAG_03332","SJAG_01314","SJAG_00499","SJAG_02817","SJAG_05016","SJAG_03554","SJAG_00596","SJAG_02756","SJAG_01193","SJAG_03901","SJAG_03289","SJAG_04181","SJAG_00769","SJAG_05693","SJAG_04574","SJAG_02660","SJAG_03713","SJAG_03531","SJAG_01146","SJAG_03487","SJAG_01192","SJAG_02024","SJAG_00325","SJAG_04453","SJAG_01375","SJAG_03322","SJAG_04159","SJAG_03773","SJAG_03548","SJAG_04735","SJAG_01482","SJAG_03087","SJAG_00886","SJAG_02692","SJAG_04680","SJAG_01043","SJAG_01425","SJAG_02873","SJAG_00257","SJAG_03630","SJAG_03228","SJAG_01958","SJAG_02821","SJAG_03825","SJAG_04658","SJAG_00812","SJAG_04034","SJAG_01269","SJAG_00559","SJAG_03008","SJAG_03016","SJAG_00286","SJAG_01261","SJAG_00825","SJAG_02042","SJAG_02467","SJAG_00508","SJAG_03949","SJAG_02386","SJAG_04993","SJAG_01536","SJAG_00255","SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85052,86423,87800,97150,106621],"is_not":false,"summary":null,"term":"GO:0008168"},{"annotations":[105221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[113202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008425"},{"annotations":[91335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[110991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010420"},{"annotations":[110992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061542"},{"annotations":[96796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003871"},{"annotations":[101261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030735"},{"annotations":[99761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030745"},{"annotations":[113556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141133"},{"annotations":[113557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004164"},{"annotations":[99763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052706"},{"annotations":[100653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[106325,104217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[91630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[91631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[112617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[112660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[112661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[106615,106616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046974"},{"annotations":[106617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[106618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[106619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[113130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"},{"annotations":[108784,111544,96550,109647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042054"},{"annotations":[86623,90074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062152"},{"annotations":[112870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[105886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001734"},{"annotations":[96739,86072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071885"},{"annotations":[96740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008112"},{"annotations":[105407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080101"},{"annotations":[105408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000773"},{"annotations":[103514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004608"},{"annotations":[91134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[109649,102041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[84035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"},{"annotations":[91648,92624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102559"},{"annotations":[108785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016274"},{"annotations":[108786,96551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"},{"annotations":[91649,92625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036009"},{"annotations":[83845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018064"},{"annotations":[93097,83846,111545,113274,100841,95465,112940,92850,106622,108519,110138,96741,100169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016279"},{"annotations":[104158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990276"},{"annotations":[92187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071164"},{"annotations":[108816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008173"},{"annotations":[83613,94993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016433"},{"annotations":[94551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[109742,91769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[91046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[85803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[87470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070037"},{"annotations":[97473,85804,104504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[112326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"},{"annotations":[104220,106327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008649"},{"annotations":[114119,66650,88140,84770,94215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008757"},{"annotations":[94668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008898"},{"annotations":[105244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090486"},{"annotations":[100395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003838"},{"annotations":[85558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004799"},{"annotations":[90823,90827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046547"},{"annotations":[84771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[108274,97095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160107"},{"annotations":[93995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106339"},{"annotations":[101891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016427"},{"annotations":[102882,106284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052735"},{"annotations":[90075,90076,101892,86624,86625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016428"},{"annotations":[100266,103391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160102"},{"annotations":[103392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160104"},{"annotations":[103393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160103"},{"annotations":[93996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106340"},{"annotations":[97505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052906"},{"annotations":[115068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008176"},{"annotations":[95538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052905"},{"annotations":[94222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[93997,87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106050"},{"annotations":[102042,90846,94217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008175"},{"annotations":[114059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"},{"annotations":[91336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120048"},{"annotations":[111548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to an acceptor molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":87,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00257":null,"SJAG_00286":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00508":null,"SJAG_00559":null,"SJAG_00596":null,"SJAG_00722":null,"SJAG_00769":null,"SJAG_00812":null,"SJAG_00825":null,"SJAG_00832":null,"SJAG_00886":null,"SJAG_00943":null,"SJAG_01043":null,"SJAG_01054":null,"SJAG_01079":null,"SJAG_01146":null,"SJAG_01192":null,"SJAG_01193":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_01425":null,"SJAG_01434":null,"SJAG_01482":null,"SJAG_01536":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02271":null,"SJAG_02281":null,"SJAG_02290":null,"SJAG_02350":null,"SJAG_02386":null,"SJAG_02417":null,"SJAG_02467":null,"SJAG_02637":null,"SJAG_02659":null,"SJAG_02660":null,"SJAG_02692":null,"SJAG_02756":null,"SJAG_02817":null,"SJAG_02821":null,"SJAG_02868":null,"SJAG_02873":null,"SJAG_02973":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03087":null,"SJAG_03228":null,"SJAG_03289":null,"SJAG_03322":null,"SJAG_03332":null,"SJAG_03367":null,"SJAG_03487":null,"SJAG_03531":null,"SJAG_03548":null,"SJAG_03554":null,"SJAG_03630":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03825":null,"SJAG_03869":null,"SJAG_03877":null,"SJAG_03901":null,"SJAG_03949":null,"SJAG_04034":null,"SJAG_04159":null,"SJAG_04181":null,"SJAG_04425":null,"SJAG_04453":null,"SJAG_04574":null,"SJAG_04627":null,"SJAG_04642":null,"SJAG_04658":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04993":null,"SJAG_05016":null,"SJAG_05225":null,"SJAG_05334":null,"SJAG_05693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9710490","Reactome:R-HSA-71286","EC:2.1.1.-","Reactome:R-HSA-379387","GO:0004480","Reactome:R-HSA-379464","Reactome:R-HSA-212269","Reactome:R-HSA-6800149"],"synonyms":[{"name":"methylase","type":"broad"}],"termid":"GO:0008168","terms_by_termid":{"GO:0000179":null,"GO:0000773":null,"GO:0001734":null,"GO:0003838":null,"GO:0003871":null,"GO:0004164":null,"GO:0004482":null,"GO:0004608":null,"GO:0004671":null,"GO:0004799":null,"GO:0004851":null,"GO:0008112":null,"GO:0008168":null,"GO:0008173":null,"GO:0008175":null,"GO:0008176":null,"GO:0008425":null,"GO:0008469":null,"GO:0008649":null,"GO:0008650":null,"GO:0008757":null,"GO:0008898":null,"GO:0009383":null,"GO:0010420":null,"GO:0016274":null,"GO:0016279":null,"GO:0016427":null,"GO:0016428":null,"GO:0016433":null,"GO:0018064":null,"GO:0018423":null,"GO:0019702":null,"GO:0030697":null,"GO:0030735":null,"GO:0030745":null,"GO:0035242":null,"GO:0036009":null,"GO:0042054":null,"GO:0042800":null,"GO:0046547":null,"GO:0046974":null,"GO:0052706":null,"GO:0052735":null,"GO:0052905":null,"GO:0052906":null,"GO:0052907":null,"GO:0052909":null,"GO:0061542":null,"GO:0062122":null,"GO:0062152":null,"GO:0070037":null,"GO:0070039":null,"GO:0070042":null,"GO:0070043":null,"GO:0071164":null,"GO:0071885":null,"GO:0080101":null,"GO:0090486":null,"GO:0102559":null,"GO:0106050":null,"GO:0106142":null,"GO:0106335":null,"GO:0106339":null,"GO:0106340":null,"GO:0120048":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null,"GO:0141101":null,"GO:0141133":null,"GO:0160102":null,"GO:0160103":null,"GO:0160104":null,"GO:0160107":null,"GO:1990259":null,"GO:1990276":null}}


id: GO:0032930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide anion generation","termid":"GO:0032928"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of superoxide anion generation","synonyms":[{"name":"activation of superoxide release","type":"narrow"},{"name":"positive regulation of superoxide release","type":"exact"},{"name":"stimulation of superoxide release","type":"narrow"},{"name":"up regulation of superoxide release","type":"exact"},{"name":"up-regulation of superoxide release","type":"exact"},{"name":"upregulation of superoxide release","type":"exact"}],"termid":"GO:0032930"}


id: PBO:0073280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 1","termid":"PBO:0073280"}


id: PATO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a father.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000433 paternal (obsolete PATO:0000433)","termid":"PATO:0000433"}


id: GO:0033962
data:
  {"annotated_genes":["SJAG_03157","SJAG_02638","SJAG_03460","SJAG_03023","SJAG_04640","SJAG_02213","SJAG_03070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88688,101692,102247,104659,108124,108279,109008],"is_not":false,"summary":null,"term":"GO:0033962"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.","definition_xrefs":["GOC:mah","PMID:17429074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02213":null,"SJAG_02638":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03157":null,"SJAG_03460":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"P-body assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P body assembly","type":"exact"},{"name":"P body biogenesis","type":"related"},{"name":"cytoplasmic mRNA processing body assembly","type":"exact"}],"termid":"GO:0033962","terms_by_termid":{"GO:0033962":null}}


id: PBO:0041773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 12","termid":"PBO:0041773"}


id: PBO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 2","termid":"PBO:0043493"}


id: PBO:0056824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14B","termid":"PBO:0056824"}


id: FYPO:0001110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, normal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, normal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, normal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, normal morphology","type":"exact"}],"termid":"FYPO:0001110"}


id: GO:0033838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.239-RXN","RHEA:18893"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-glucoside 2''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033838"}


id: GO:0097662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Das1 in S. cerevisiae.","definition_xrefs":["GOC:jd","PMID:14747994","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Das1 ubiquitin ligase complex","termid":"GO:0097662"}


id: PATO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000533 osmotic response sensitivity (obsolete PATO:0000533)","termid":"PATO:0000533"}


id: GO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["EC:2.1.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dimethylglycine N-methyltransferase activity","secondary_identifiers":["EC:2.1.1.161","RHEA:10072","KEGG_REACTION:R07244","EC:2.1.1.162","MetaCyc:RXN-9680"],"synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"related"}],"termid":"GO:0052729"}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_02427","SJAG_02374","SJAG_03012","SJAG_04992","SJAG_00479","SJAG_04346","SJAG_04919","SJAG_04066","SJAG_04562","SJAG_02759","SJAG_02754","SJAG_01954","SJAG_02475","SJAG_00390","SJAG_02868","SJAG_01161","SJAG_04176","SJAG_01420","SJAG_04004","SJAG_05248","SJAG_03658","SJAG_01621","SJAG_00271","SJAG_01122","SJAG_02535","SJAG_00689","SJAG_04492","SJAG_01811","SJAG_03080","SJAG_05679","SJAG_02417","SJAG_05223","SJAG_00932","SJAG_01494","SJAG_04308","SJAG_02436","SJAG_04395","SJAG_00166","SJAG_02830","SJAG_01813","SJAG_04304","SJAG_03697","SJAG_01606","SJAG_03905","SJAG_02644","SJAG_03458","SJAG_03466","SJAG_04669","SJAG_03773","SJAG_03496","SJAG_04289","SJAG_00921","SJAG_04599","SJAG_01581","SJAG_00722","SJAG_04108","SJAG_00882","SJAG_01339","SJAG_02952","SJAG_03789","SJAG_01364","SJAG_02275","SJAG_00949","SJAG_00752","SJAG_02840","SJAG_04414","SJAG_00537","SJAG_00749","SJAG_03413","SJAG_04940","SJAG_02890","SJAG_04180","SJAG_03713","SJAG_00323","SJAG_05190","SJAG_01568","SJAG_01454","SJAG_03666","SJAG_00841","SJAG_02508","SJAG_04330","SJAG_01752","SJAG_04847","SJAG_02745","SJAG_01839"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84130,86120,86531,86983,87210,87211,88154,94549,96602,96861,97999,99035,99529,100681,101837,101838,103089,104071,104113,104293,107186,108409,108922,112237,112675,113391,114995,115046,115047],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[94121,114978,112285,108264,105132,111889,109021,85799,111890,88944,107560,106932,96716,112772,102112,89341,98645,103554,88528,96532,95311,96859,99638],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[100243,87837,114646,91101],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[90979,93212,98646,83844,88240,106861,112696,100916,95589,98029,100409,101323,94122,98030,100260,106862,111469,112695,111470,100180],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[112287,89035,114980,88946,109739,103995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[86013,88529,85801,96860,102114,106934,94124,110966,111891,113763,94091,111892,113742],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[104503],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[98612,101664,111764,111831,113867,114276,99805,93624,93623,98611,97332,89503],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03413":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03666":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: FYPO:0004459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more translation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) when the cell is subject to nitrogen starvation. Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased level of translation gene mRNA during nitrogen starvation","synonyms":[{"name":"increased level of translation gene RNA during nitrogen starvation","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen depletion","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen deprivation","type":"exact"},{"name":"increased level of translation gene transcripts nitrogen starvation","type":"exact"},{"name":"increased translation gene mRNA accumulation during nitrogen starvation","type":"related"}],"termid":"FYPO:0004459"}


id: PBO:0036191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0036191"}


id: PBO:0057092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 188","termid":"PBO:0057092"}


id: GO:0019588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process","synonyms":[{"name":"glycerol fermentation","type":"exact"}],"termid":"GO:0019588"}


id: GO:0060446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches in the open tracheal system are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in open tracheal system development","termid":"GO:0060446"}


id: PBO:0056825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14C, pseudogene","termid":"PBO:0056825"}


id: PBO:0066146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 2","termid":"PBO:0066146"}


id: GO:0098830
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An endosome present in the presynapse that fuses with endocytic vesicles arising in the presynaptic endocytic zone. This organelle is believed to be involved in regeneration of synaptic vesicles.","definition_xrefs":["PMID:20200227","PMID:25939282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"presynaptic endosome","termid":"GO:0098830"}


id: GO:1990576
data:
  {"annotated_genes":["SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111645],"is_not":false,"summary":null,"term":"GO:1990576"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular glucose molecule and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:15667320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled glucose receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled glucose receptor activity","type":"exact"}],"termid":"GO:1990576","terms_by_termid":{"GO:1990576":null}}


id: PBO:0112746
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive Gene","termid":"PBO:0112746"}


id: PR:Q9USQ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine--ammonia ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.12","synonyms":[{"name":"Spom972h-dph6","type":"exact"},{"name":"diphthamide synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diphthamide synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ7"}


id: PBO:0049462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 2","termid":"PBO:0049462"}


id: PBO:0045175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A3","termid":"PBO:0045175"}


id: PBO:0089130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor alpha subunit Srp101","termid":"PBO:0089130"}


id: PBO:0076886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 37","termid":"PBO:0076886"}


id: FYPO:0005512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the meiosis I spindle assembly checkpoint is activated more frequently than normal, typically under conditions that do not cause checkpoint activation in wild-type cells. The meiosis I spindle assembly checkpoint normally delays the metaphase/anaphase transition of the first meiotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:vw","PMID:26483559","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint phenotype","termid":"FYPO:0005511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"increased activation of meiosis I spindle assembly checkpoint","synonyms":[{"name":"increased activation of first meiotic nuclear division spindle assembly checkpoint","type":"exact"},{"name":"increased activation of meiosis I cell cycle spindle assembly checkpoint","type":"exact"},{"name":"increased activation of spindle assembly checkpoint during meiosis I","type":"exact"},{"name":"increased meiosis I spindle assembly checkpoint activation","type":"exact"}],"termid":"FYPO:0005512"}


id: GO:0004055
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106592],"is_not":false,"summary":null,"term":"GO:0004055"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate.","definition_xrefs":["EC:6.3.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"argininosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ARGSUCCINSYN-RXN","RHEA:10932","Reactome:R-HSA-70577"],"synonyms":[{"name":"L-citrulline:L-aspartate ligase (AMP-forming)","type":"related"},{"name":"arginine succinate synthetase activity","type":"related"},{"name":"argininosuccinate synthetase activity","type":"related"},{"name":"argininosuccinic acid synthetase activity","type":"related"},{"name":"arginosuccinate synthetase activity","type":"related"},{"name":"citrulline--aspartate ligase activity","type":"related"}],"termid":"GO:0004055","terms_by_termid":{"GO:0004055":null}}


id: GO:0061302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a smooth muscle cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:dph","PMID:8837777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}


id: PBO:0050973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 18","termid":"PBO:0050973"}


id: GO:0099118
data:
  {"annotated_genes":["SJAG_00851","SJAG_01546","SJAG_02761","SJAG_01297","SJAG_03540","SJAG_03437","SJAG_05319","SJAG_05220","SJAG_02336","SJAG_01775","SJAG_01224","SJAG_02731","SJAG_05266","SJAG_00918","SJAG_01371","SJAG_01211"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[104386,114753,100032,96517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[92918,85921,113031,96645,106017,85321,87141,94765,103624,105007,110219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of proteins.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02336":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"microtubule-based protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099118","terms_by_termid":{"GO:0099117":null,"GO:0140210":null,"GO:1990976":null}}


id: PBO:0072179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 6","termid":"PBO:0072179"}


id: PBO:0069796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1082, pseudogene","termid":"PBO:0069796"}


id: PBO:0061248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2","termid":"PBO:0061248"}


id: PBO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (predicted)","termid":"PBO:0005499"}


id: FYPO:0001602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in vacuole","synonyms":[{"name":"decreased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"decreased vacuolar level of substance","type":"exact"},{"name":"reduced level of substance in vacuole","type":"exact"}],"termid":"FYPO:0001602"}


id: GO:0010432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["PMID:16554366","PO:0009055","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract development","termid":"GO:0010432"}


id: PBO:0054346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1739","termid":"PBO:0054346"}


id: PBO:0108837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase activating complex subunit Npr3","termid":"PBO:0108837"}


id: PBO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 24","termid":"PBO:0072093"}


id: GO:0097579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining copper ions in an extracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mr","PMID:3099306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of copper ion","termid":"GO:0097578"},{"relation_name":"part_of","term_name":"intracellular copper ion homeostasis","termid":"GO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extracellular sequestering of copper ion","synonyms":[{"name":"extracellular copper ion retention","type":"exact"},{"name":"extracellular copper ion sequestering","type":"exact"},{"name":"extracellular copper ion sequestration","type":"exact"},{"name":"extracellular copper ion storage","type":"exact"},{"name":"extracellular retention of copper ion","type":"exact"},{"name":"extracellular sequestration of copper ion","type":"exact"},{"name":"extracellular storage of copper ion","type":"exact"}],"termid":"GO:0097579"}


id: PBO:0073273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 9","termid":"PBO:0073273"}


id: SO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The simplest repeated component of a repeat region. A single repeat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_unit","secondary_identifiers":["http://www.insdc.org/files/feature_table.html"],"synonyms":[{"name":"repeat unit","type":"exact"}],"termid":"SO:0000726"}


id: GO:0016561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are moved across the peroxisomal membrane into the matrix. It is likely that the peroxisome targeting sequence receptor remains associated with cargo proteins during translocation.","definition_xrefs":["PMID:11687502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"part_of","term_name":"protein import into peroxisome matrix","termid":"GO:0016558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0007031","GO:0055085"],"is_obsolete":false,"name":"protein import into peroxisome matrix, translocation","synonyms":[{"name":"peroxisome matrix protein import, translocation","type":"exact"},{"name":"peroxisome receptor translocation","type":"related"},{"name":"protein translocation during peroxisome matrix protein import","type":"exact"},{"name":"protein translocation during protein import into peroxisome matrix","type":"exact"},{"name":"protein translocation during protein transport into peroxisome matrix","type":"exact"},{"name":"protein transport into peroxisome matrix, translocation","type":"exact"}],"termid":"GO:0016561"}


id: GO:0043445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acetone, propan-2-one.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone biosynthetic process (obsolete GO:0043445)","synonyms":[{"name":"2-propanone biosynthesis","type":"exact"},{"name":"2-propanone biosynthetic process","type":"exact"},{"name":"acetone anabolism","type":"exact"},{"name":"acetone biosynthesis","type":"exact"},{"name":"acetone formation","type":"exact"},{"name":"acetone synthesis","type":"exact"},{"name":"dimethyl ketone biosynthesis","type":"exact"},{"name":"dimethyl ketone biosynthetic process","type":"exact"},{"name":"propan-2-one biosynthesis","type":"exact"},{"name":"propan-2-one biosynthetic process","type":"exact"}],"termid":"GO:0043445"}


id: PBO:0073321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 4","termid":"PBO:0073321"}


id: FYPO:0006003
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component organization at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0016043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization phenotype","termid":"FYPO:0000334"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular component organization","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"normal cellular component organisation","type":"exact"},{"name":"normal cellular component organization at cellular level","type":"exact"}],"termid":"FYPO:0006003","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PBO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-18","termid":"PBO:0051419"}


id: FYPO:0002722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"phytochelatin absent from cell","synonyms":[{"name":"cadystin absent from cell","type":"exact"},{"name":"phytochelatin absent from cell during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002722"}


id: FYPO:0004697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,2-dioctanoyl-sn-glycerol (DiC8 DAG). Cells stop growing (and may die) at a concentration of 1,2-dioctanoyl-sn-glycerol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 1,2-dioctanoyl-sn-glycerol","synonyms":[{"name":"hypersensitive to 1,2-dioctanoyl-sn-glycerol","type":"exact"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during vegetative growth","type":"exact"},{"name":"sensitive to DiC8 DAG","type":"exact"}],"termid":"FYPO:0004697"}


id: PBO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-11","termid":"PBO:0051137"}


id: PBO:0031609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G1_phase_progression","termid":"PBO:0031609"}


id: PBO:0013069
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complement S. cerevisiae CDC28 when introns removed","termid":"PBO:0013069"}


id: GO:0033204
data:
  {"annotated_genes":["SJAG_03796","SJAG_01623"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100672,114685],"is_not":false,"summary":null,"term":"GO:0033204"}]},"cv_name":"molecular_function","definition":"Binding to RNA subunit of ribonuclease P.","definition_xrefs":["GOC:pg","PMID:11455963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01623":null,"SJAG_03796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribonuclease P RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase P RNA binding","type":"exact"}],"termid":"GO:0033204","terms_by_termid":{"GO:0033204":null}}


id: PBO:0075347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS Ras/Rho guanine nucleotide exchange factor 2","termid":"PBO:0075347"}


id: FYPO:0001722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased sodium export","synonyms":[{"name":"decreased cellular sodium export","type":"exact"},{"name":"decreased sodium export during mitotic cell cycle","type":"related"},{"name":"decreased sodium export during vegetative growth","type":"exact"},{"name":"decreased sodium export from cell","type":"exact"},{"name":"decreased sodium ion export","type":"exact"},{"name":"reduced sodium export","type":"exact"}],"termid":"FYPO:0001722"}


id: GO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the second transesterification reaction of U2-type spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. The catalytic site is thought to be formed by U6 and/or U2 snRNAs and/or associated proteins.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete second U2-type spliceosomal transesterification activity (obsolete GO:0000364)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"second U2-type spliceosomal transesterification activity","type":"exact"}],"termid":"GO:0000364"}


id: GO:0032424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mismatch repair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mismatch repair","termid":"GO:0032423"},{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"negatively_regulates","term_name":"mismatch repair","termid":"GO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"negative regulation of mismatch repair","synonyms":[{"name":"down regulation of mismatch repair","type":"exact"},{"name":"down-regulation of mismatch repair","type":"exact"},{"name":"downregulation of mismatch repair","type":"exact"},{"name":"inhibition of mismatch repair","type":"narrow"}],"termid":"GO:0032424"}


id: SO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an mRNA sequence that has been reprogrammed at translation, causing localized alterations.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded","termid":"SO:0000881"}


id: SO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a signal recognition particle (SRP) RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"SRP_RNA_encoding","termid":"SO:0000642"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_gene","synonyms":[{"name":"SRP RNA gene","type":"exact"}],"termid":"SO:0001269"}


id: PBO:0078923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-2","termid":"PBO:0078923"}


id: GO:0005559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ribozyme (obsolete GO:0005559)","synonyms":[{"name":"ribozyme","type":"exact"}],"termid":"GO:0005559"}


id: SO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:069"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five methoxycarbonylmethyl two prime O methyluridine","type":"exact"},{"name":"mcm5Um","type":"exact"}],"termid":"SO:0001361"}


id: PBO:0058868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9901","termid":"PBO:0058868"}


id: PBO:0075073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 123","termid":"PBO:0075073"}


id: GO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nucleolar RNA (snoRNA) from a DNA template by RNA polymerase III, originating at a type 2 RNA polymerase III promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"sno(s)RNA transcription","termid":"GO:0009302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"snoRNA transcription by RNA polymerase III","synonyms":[{"name":"snoRNA transcription from a type 2 RNA polymerase III promoter","type":"narrow"}],"termid":"GO:0001014"}


id: GO:1990201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of alkanesulfonate monooxygenase activity. Involved in the utilization of alkanesulfonates as sulfur sources under conditions of sulfate or cysteine starvation, catalyzing the conversion of alkanesulfonates into aldehydes and sulfite. In E.coli the complex consists of a SsuD tetramer.","definition_xrefs":["GOC:bhm","PMID:10480865","PMID:16997955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"alkanesulfonate monooxygenase complex","synonyms":[{"name":"SsuD complex","type":"narrow"}],"termid":"GO:1990201"}


id: PBO:0077424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM161B divergent transcript","termid":"PBO:0077424"}


id: PBO:0061041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 2","termid":"PBO:0061041"}


id: PBO:0071725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 23","termid":"PBO:0071725"}


id: PBO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyltransferase Cid1","termid":"PBO:0031894"}


id: PBO:0030620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha-glucosidase_activity","termid":"PBO:0030620"}


id: GO:1901570
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid derivative biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative anabolism","type":"exact"},{"name":"fatty acid derivative biosynthesis","type":"exact"},{"name":"fatty acid derivative formation","type":"exact"},{"name":"fatty acid derivative synthesis","type":"exact"}],"termid":"GO:1901570","terms_by_termid":{"GO:0035338":null}}


id: PBO:0076290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin III","termid":"PBO:0076290"}


id: PBO:0003528
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localization dependent on F-actin","termid":"PBO:0003528"}


id: PBO:0044589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBT pseudogene 1","termid":"PBO:0044589"}


id: PBO:0017435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spatially_disjoint_from","termid":"PBO:0017435"}


id: PBO:0076871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 19","termid":"PBO:0076871"}


id: GO:0035281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transport of pre-microRNAs (pre-miRNAs) from the nucleus to the cytoplasm. Pre-miRNAs are a ~60-70 nucleotide stem loop intermediate in miRNA production, produced by the nuclear cleavage of a primary miRNA (pri-mRNA) transcript. Pre-miRNAs are transported from the nucleus to the cytoplasm where further cleavage occurs to produce a mature miRNA product.","definition_xrefs":["PMID:14744438","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"part_of","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"pre-miRNA export from nucleus","synonyms":[{"name":"pre-microRNA export from cell nucleus","type":"exact"},{"name":"pre-microRNA export from nucleus","type":"related"},{"name":"pre-microRNA export out of nucleus","type":"exact"},{"name":"pre-microRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"pre-microRNA-nucleus export","type":"exact"}],"termid":"GO:0035281"}


id: PBO:0068749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 4, pseudogene","termid":"PBO:0068749"}


id: PBO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decorin","termid":"PBO:0044637"}


id: PBO:0078374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase pseudogene 1","termid":"PBO:0078374"}


id: PBO:0064936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase domain and WD repeat containing 1","termid":"PBO:0064936"}


id: PBO:0069161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 413, pseudogene","termid":"PBO:0069161"}


id: PBO:0078195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-5","termid":"PBO:0078195"}


id: GO:1905252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GO_REF:0000060","GOC:BHF_miRNA","GOC:bc","GOC:TermGenie","GOC:BHF","PMID:23069713"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of epidermal growth factor receptor signaling pathway involved in heart process (obsolete GO:1905252)","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"}],"termid":"GO:1905252"}


id: PBO:0091617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf2, reactive intermediate imine deaminase A homolog","termid":"PBO:0091617"}


id: PBO:0074845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36B","termid":"PBO:0074845"}


id: GO:0014904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell development","termid":"GO:0055001"},{"relation_name":"part_of","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube cell development","termid":"GO:0014904"}


id: GO:0090160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to lysosomes.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to vacuole transport","termid":"GO:0006896"},{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"Golgi to lysosome transport","termid":"GO:0090160"}


id: PBO:0063907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase adaptor protein 1","termid":"PBO:0063907"}


id: PBO:0079815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like with PHD and ring finger domains 2","termid":"PBO:0079815"}


id: GO:0010624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:dph","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation","termid":"GO:0010624"}


id: PBO:0083834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); non-essential gene; interacts with Rpn4p; protein abundance increases in response to DNA replication stress; ortholog of human p27","termid":"PBO:0083834"}


id: PBO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8","termid":"PBO:0042541"}


id: GO:0000175
data:
  {"annotated_genes":["SJAG_04006","SJAG_00081","SJAG_04084","SJAG_02540","SJAG_03876","SJAG_01798","SJAG_03745","SJAG_00966","SJAG_04369","SJAG_04824","SJAG_04153","SJAG_01822","SJAG_04407","SJAG_02993","SJAG_01836","SJAG_00401","SJAG_03132","SJAG_04818","SJAG_04519","SJAG_00841","SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86152,88397,91776,95075,98214,99073,99807,100530,101376,103583,103907,104611,107372,111442,111772,112727,114391],"is_not":false,"summary":null,"term":"GO:0000175"},{"annotations":[110551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[111777,109043,103908,89549,112728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[89872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787","GO:0140098","GO:0004527"],"is_obsolete":false,"name":"3'-5'-RNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6791222","Reactome:R-HSA-9682603","Reactome:R-HSA-9836585","Reactome:R-HSA-6791227","Reactome:R-HSA-9836822","Reactome:R-HSA-430028","Reactome:R-HSA-9694632","Reactome:R-HSA-9822437"],"synonyms":[{"name":"3'-5' exoribonuclease activity","type":"exact"},{"name":"3'-5'-exoribonuclease activity","type":"exact"}],"termid":"GO:0000175","terms_by_termid":{"GO:0000175":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: PBO:0041291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1s","termid":"PBO:0041291"}


id: FYPO:0006183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abnormal during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to nucleus during meiotic prophase I","synonyms":[{"name":"abnormal protein localisation to nucleus during meiotic prophase I","type":"exact"},{"name":"abnormal protein localization to nucleus during prophase I","type":"exact"}],"termid":"FYPO:0006183"}


id: PBO:0003960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, involved in translation (predicted)","termid":"PBO:0003960"}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:expert_rsh","GOC:ma","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: PBO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc14-related protein phosphatase Clp1/Flp1","termid":"PBO:0002680"}


id: GO:0033070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of ansamycins, any of a group of complex macrolactam compounds characterized by a cyclic structure in which an aliphatic ansa chain forms a bridge between two non-adjacent positions of a cyclic p-system; many exhibit antibacterial, antifungal or antitumor activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ansamycin metabolic process","termid":"GO:0033069"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ansamycin biosynthetic process","synonyms":[{"name":"ansamycin anabolism","type":"exact"},{"name":"ansamycin biosynthesis","type":"exact"},{"name":"ansamycin formation","type":"exact"},{"name":"ansamycin synthesis","type":"exact"}],"termid":"GO:0033070"}


id: GO:0032795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heterotrimeric G-protein.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heterotrimeric G-protein binding","termid":"GO:0032795"}


id: GO:0003689
data:
  {"annotated_genes":["SJAG_00272","SJAG_00863","SJAG_02563","SJAG_00806","SJAG_04150","SJAG_01010","SJAG_02610","SJAG_02373","SJAG_00729","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85306,85753,87855,90115,91418,92455,103106,108403,108863,108955],"is_not":false,"summary":null,"term":"GO:0003689"}]},"cv_name":"molecular_function","definition":"Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex, driven by ATP hydrolysis.","definition_xrefs":["PMID:16082778","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00806":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02373":null,"SJAG_02563":null,"SJAG_02610":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA clamp loader activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033170","Reactome:R-HSA-176264","Reactome:R-HSA-174439"],"synonyms":[{"name":"DNA clamp loading ATPase activity","type":"exact"},{"name":"DNA-protein loading ATPase activity","type":"related"},{"name":"PCNA loading activity","type":"narrow"},{"name":"PCNA loading complex activity","type":"narrow"},{"name":"protein-DNA loading ATPase activity","type":"related"}],"termid":"GO:0003689","terms_by_termid":{"GO:0003689":null}}


id: GO:0021970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the cerebral peduncle through the basilar pons in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","PMID:9878731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the basilar pons","synonyms":[{"name":"corticospinal neuron axon pathfinding through the basilar pons","type":"exact"}],"termid":"GO:0021970"}


id: PBO:0081374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 213","termid":"PBO:0081374"}


id: GO:0052630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + N-acetyl-alpha-D-galactosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-galactosamine.","definition_xrefs":["RHEA:34363","EC:2.7.7.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine diphosphorylase activity","synonyms":[{"name":"N-acetylgalactosamine 1-phosphate uridylyltransferase","type":"exact"},{"name":"N-acetylgalactosamine-1-phosphate uridyltransferase activity","type":"exact"},{"name":"UDP-GalNAc pyrophosphorylase activity","type":"exact"},{"name":"UDP-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UDP-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UTP:2-acetamido-2-deoxy-alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"UTP:N-acetyl-alpha-D-galactosamine-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphate-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine phosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine pyrophosphorylase activity","type":"exact"}],"termid":"GO:0052630"}


id: PBO:0013071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-Two Homolog","termid":"PBO:0013071"}


id: PBO:0059304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L50","termid":"PBO:0059304"}


id: PR:Q92365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.05","synonyms":[{"name":"Spom972h-rpl3601","type":"exact"}],"termid":"PR:Q92365"}


id: GO:0033116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.","definition_xrefs":["PMID:16723730","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment membrane","synonyms":[{"name":"ER-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:0033116"}


id: GO:0002936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the peptide hormone bradykinin.","definition_xrefs":["PMID:11226291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bradykinin biosynthetic process","termid":"GO:0002936"}


id: FYPO:0007487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which insertion of the newly formed spindle pole body into the nuclear envelope does not occur during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:27889481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during meiosis II","synonyms":[{"name":"abolished new meiotic SPB insertion into nuclear envelope during meiosis II","type":"exact"},{"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during second meiotic nuclear division","type":"exact"},{"name":"abolished new spindle pole body insertion into nuclear envelope during meiosis II","type":"exact"}],"termid":"FYPO:0007487"}


id: GO:0032381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"negative regulation of intracellular lipid transport","termid":"GO:0032378"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"negatively_regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular sterol transport","synonyms":[{"name":"down regulation of intracellular sterol transport","type":"exact"},{"name":"down-regulation of intracellular sterol transport","type":"exact"},{"name":"downregulation of intracellular sterol transport","type":"exact"},{"name":"inhibition of intracellular sterol transport","type":"narrow"}],"termid":"GO:0032381"}


id: PBO:0067118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 163, pseudogene","termid":"PBO:0067118"}


id: GO:0090234
data:
  {"annotated_genes":["SJAG_00718","SJAG_01837","SJAG_03048","SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[98505,85823,112796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of kinetochore assembly, the aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centromere complex assembly","termid":"GO:0090230"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901719"],"synonyms":[{"name":"regulation of NMS complex assembly","type":"narrow"},{"name":"regulation of chromosome-kinetochore attachment","type":"narrow"}],"termid":"GO:0090234","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: PBO:0031901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp2 (predicted)","termid":"PBO:0031901"}


id: PBO:0071709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 7","termid":"PBO:0071709"}


id: FYPO:0000949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"output_of","term_name":"abolished septum assembly","termid":"FYPO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"aseptate","synonyms":[{"name":"absent septum","type":"exact"},{"name":"aseptate during mitotic cell cycle","type":"related"},{"name":"aseptate during vegetative growth","type":"exact"}],"termid":"FYPO:0000949"}


id: PBO:0054879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2293","termid":"PBO:0054879"}


id: PBO:0000481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 3 Pac10 (predicted)","termid":"PBO:0000481"}


id: FYPO:0007617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium azide (NaN3). Cells stop growing (and may die) at a concentration of sodium azide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sodium azide","synonyms":[{"name":"sensitive to NaN3","type":"exact"},{"name":"sensitive to sodium azide during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium azide during vegetative growth","type":"exact"}],"termid":"FYPO:0007617"}


id: PBO:0072691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 2","termid":"PBO:0072691"}


id: PBO:0052498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 10","termid":"PBO:0052498"}


id: PBO:0091401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex proline-rich subunit Iss10/Pir1","termid":"PBO:0091401"}


id: SO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe","termid":"SO:0001817"}


id: PBO:0082392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta' regulatory subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerase","termid":"PBO:0082392"}


id: PR:O94711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp2 gene.","definition_xrefs":["UniProtKB:O94711","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.11c","synonyms":[{"name":"Spom972h-gyp2","type":"exact"}],"termid":"PR:O94711"}


id: _global:level_fluctuates_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification site occupancy is observed to vary.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"level_fluctuates_during","synonyms":[{"name":"occupancy_fluctuates_during","type":"exact"}],"termid":"_global:level_fluctuates_during"}


id: PBO:0079184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 13, pseudogene","termid":"PBO:0079184"}


id: GO:0048815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of hermaphrodite genitalia are generated and organized.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete hermaphrodite genitalia morphogenesis (obsolete GO:0048815)","termid":"GO:0048815"}


id: PBO:0069139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 390, pseudogene","termid":"PBO:0069139"}


id: GO:1900156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of bone trabecula formation","termid":"GO:1900154"},{"relation_name":"positively_regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone trabecula formation","synonyms":[{"name":"activation of bone trabecula biogenesis","type":"related"},{"name":"activation of bone trabecula formation","type":"narrow"},{"name":"activation of bone trabeculation","type":"narrow"},{"name":"activation of skeletal trabecula biogenesis","type":"related"},{"name":"activation of skeletal trabecula formation","type":"narrow"},{"name":"activation of skeletal trabeculation","type":"narrow"},{"name":"positive regulation of bone trabecula biogenesis","type":"related"},{"name":"positive regulation of bone trabeculation","type":"exact"},{"name":"positive regulation of skeletal trabecula biogenesis","type":"related"},{"name":"positive regulation of skeletal trabecula formation","type":"exact"},{"name":"positive regulation of skeletal trabeculation","type":"exact"},{"name":"up regulation of bone trabecula biogenesis","type":"related"},{"name":"up regulation of bone trabecula formation","type":"exact"},{"name":"up regulation of bone trabeculation","type":"exact"},{"name":"up regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up regulation of skeletal trabecula formation","type":"exact"},{"name":"up regulation of skeletal trabeculation","type":"exact"},{"name":"up-regulation of bone trabecula biogenesis","type":"related"},{"name":"up-regulation of bone trabecula formation","type":"exact"},{"name":"up-regulation of bone trabeculation","type":"exact"},{"name":"up-regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up-regulation of skeletal trabecula formation","type":"exact"},{"name":"up-regulation of skeletal trabeculation","type":"exact"},{"name":"upregulation of bone trabecula biogenesis","type":"related"},{"name":"upregulation of bone trabecula formation","type":"exact"},{"name":"upregulation of bone trabeculation","type":"exact"},{"name":"upregulation of skeletal trabecula biogenesis","type":"related"},{"name":"upregulation of skeletal trabecula formation","type":"exact"},{"name":"upregulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900156"}


id: PR:P41389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11630:SF42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.05","secondary_identifiers":["UniProtKB:P41389"],"synonyms":[{"name":"SPAC1B2.05","type":"related"},{"name":"Spom972h-MCM5","type":"exact"},{"name":"cell division control protein nda4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nda4","type":"related"}],"termid":"PR:P41389"}


id: PBO:0088915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate-tRNA ligase Drs1","termid":"PBO:0088915"}


id: PBO:0079865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 2","termid":"PBO:0079865"}


id: GO:2001032
data:
  {"annotated_genes":["SJAG_03048","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[103526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NHEJ","type":"exact"}],"termid":"GO:2001032","terms_by_termid":{"GO:2001033":null,"GO:2001034":null}}


id: PATO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population that undergo sexual reproduction.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological sex","termid":"PATO:0000047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type","termid":"PATO:0001895"}


id: PBO:0065825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5 interacting factor","termid":"PBO:0065825"}


id: PBO:0049752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 2","termid":"PBO:0049752"}


id: GO:1904191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of cyclin-dependent protein serine/threonine kinase activity that is involved in meiotic nuclear division.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:15791259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0045737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in meiotic nuclear division","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"positive regulation of CDK activity involved in meiotic nuclear division","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in meiosis","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"up regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"}],"termid":"GO:1904191"}


id: GO:0006161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine metabolic process","termid":"GO:0042453"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyguanosine catabolic process","synonyms":[{"name":"deoxyguanosine breakdown","type":"exact"},{"name":"deoxyguanosine catabolism","type":"exact"},{"name":"deoxyguanosine degradation","type":"exact"}],"termid":"GO:0006161"}


id: PBO:0050410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPD divergent transcript","termid":"PBO:0050410"}


id: PBO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 2","termid":"PBO:0039696"}


id: PBO:0041597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 8","termid":"PBO:0041597"}


id: GO:2000741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell differentiation","termid":"GO:2000741"}


id: GO:0120225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"coenzyme A binding","synonyms":[{"name":"CoA binding","type":"exact"}],"termid":"GO:0120225"}


id: GO:0098639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any collagen binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen binding","termid":"GO:0005518"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0098631","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"collagen binding involved in cell-matrix adhesion","termid":"GO:0098639"}


id: PBO:0079066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 2-1","termid":"PBO:0079066"}


id: GO:0021901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neuroepithelial cell to become a neuron that will reside in the forebrain.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","PMID:16226447","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"},{"relation_name":"part_of","term_name":"early neuron differentiation in forebrain","termid":"GO:0021862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"early neuron fate commitment in forebrain","termid":"GO:0021901"}


id: GO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous GTP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in the yeast Saccharomyces cerevisiae where the ligation reaction also produces a 2'-phosphate at the splice junction which is subsequently removed as part of the ligation process.","definition_xrefs":["GOC:krc","PMID:18217203","PMID:9299409"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing GTP as source of linkage phosphate (obsolete GO:0000970)","termid":"GO:0000970"}


id: GO:0050191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + GTP = 3-phospho-D-glyceroyl phosphate + GDP + H+.","definition_xrefs":["RHEA:23332","EC:2.7.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate kinase (GTP) activity","secondary_identifiers":["KEGG_REACTION:R01517","MetaCyc:PHOSPHOGLYCERATE-KINASE-GTP-RXN"],"synonyms":[{"name":"GTP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0050191"}


id: GO:0099149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor internalization","termid":"GO:0098884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor internalization","synonyms":[{"name":"regulation of postsynaptic neurotransmitter receptor endocytosis","type":"exact"}],"termid":"GO:0099149"}


id: GO:0075241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zoospore formation","termid":"GO:0075240"},{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"positively_regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore formation","termid":"GO:0075241"}


id: PBO:0064435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1","termid":"PBO:0064435"}


id: GO:0097016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a L27 domain of a protein. L27 is composed of conserved negatively charged amino acids and a conserved aromatic amino acid. L27 domains can assemble proteins involved in signaling and establishment and maintenance of cell polarity into complexes by interacting in a heterodimeric manner.","definition_xrefs":["GOC:BHF","Prosite:PDOC51022","PMID:15241471","PMID:17237226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"L27 domain binding","termid":"GO:0097016"}


id: PBO:0089122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent oxidoreductase domain","termid":"PBO:0089122"}


id: PBO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit (predicted)","termid":"PBO:0004490"}


id: GO:1990923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of at least EXD1, TDRD12 and some PIWI protein. The complex is required for MILI slicing-triggered biogenesis and loading of MIWI2 piRNAs.","definition_xrefs":["PMID:26669262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PET complex","termid":"GO:1990923"}


id: PBO:0046466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum aminopeptidase 2","termid":"PBO:0046466"}


id: PBO:0003453
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.15","termid":"PBO:0003453"}


id: GO:0102592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delphinidin 3-O-rutinoside-7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) + 1-O-4-hydroxybenzoyl-beta-D-glucose = violdelphin + beta-D-glucose.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"delphinidin 7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) acyltransferase (acyl-glucose dependent activity","secondary_identifiers":["MetaCyc:RXN-15354"],"termid":"GO:0102592"}


id: GO:1901349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glucosinolate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glucosinolate transport","termid":"GO:1901349"}


id: GO:0048089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female pigmentation","termid":"GO:0048089"}


id: FYPO:0004630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"decreased transcript level during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004630"}


id: PBO:0045905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 3","termid":"PBO:0045905"}


id: GO:1902344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltose transport.","definition_xrefs":["GOC:dph","PMID:23770568","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltose transport","termid":"GO:1902343"},{"relation_name":"negatively_regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltose transport","synonyms":[{"name":"down regulation of maltose transport","type":"exact"},{"name":"down-regulation of maltose transport","type":"exact"},{"name":"downregulation of maltose transport","type":"exact"},{"name":"inhibition of maltose transport","type":"narrow"}],"termid":"GO:1902344"}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: PBO:0085261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral protein of cytosolic face of mitochondrial outer membrane; required for mitochondrial fission; interacts with Fis1p and with the self-assembled oligomeric form of the dynamin-related GTPase Dnm1p; contains WD repeats; MDV1 has a paralog, CAF4, that arose from the whole genome duplication","termid":"PBO:0085261"}


id: PBO:0075018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-29","termid":"PBO:0075018"}


id: GO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. High molecular weight (100-300 kDa) proteins that associate with intermediate filaments to cross-link them into loose networks.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type II intermediate filament associated protein (obsolete GO:0001723)","synonyms":[{"name":"type II intermediate filament associated protein","type":"exact"}],"termid":"GO:0001723"}


id: PBO:0110496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 11","termid":"PBO:0110496"}


id: PBO:0038878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 5","termid":"PBO:0038878"}


id: PBO:0038804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 8","termid":"PBO:0038804"}


id: PBO:0081850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 783","termid":"PBO:0081850"}


id: GO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-3 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-3 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-3_receptor"],"synonyms":[{"name":"IL-3 receptor activity","type":"exact"},{"name":"IL-3R","type":"exact"}],"termid":"GO:0004912"}


id: GO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-5 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-5 receptor activity","synonyms":[{"name":"IL-5 receptor activity","type":"exact"},{"name":"IL-5R","type":"exact"}],"termid":"GO:0004914"}


id: PBO:0005620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cek1","termid":"PBO:0005620"}


id: PBO:0029166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation","termid":"PBO:0029166"}


id: GO:0008589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of smoothened signaling pathway","secondary_identifiers":["GO:0007226","GO:0043109"],"synonyms":[{"name":"regulation of hedgehog signaling pathway","type":"exact"},{"name":"regulation of hh signaling pathway","type":"exact"},{"name":"regulation of smoothened activity","type":"related"},{"name":"regulation of smoothened by patched","type":"related"},{"name":"regulation of smoothened receptor activity by patched","type":"related"},{"name":"regulation of smoothened signalling pathway","type":"exact"}],"termid":"GO:0008589"}


id: SO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_cis_hydroxyisopentenyl_adenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_cis_hydroxyisopentenyl_adenosine","secondary_identifiers":["RNAMOD:008"],"synonyms":[{"name":"N6 cis hydroxyisopentenyl adenosine","type":"exact"},{"name":"N6-(cis-hydroxyisopentenyl)adenosine","type":"exact"},{"name":"io6A","type":"exact"}],"termid":"SO:0001302"}


id: PBO:0058693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6821","termid":"PBO:0058693"}


id: PBO:0052707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 8","termid":"PBO:0052707"}


id: GO:0047726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferrocytochrome c + Fe3+ = ferricytochrome c + Fe2+.","definition_xrefs":["EC:1.9.98.1","MetaCyc:IRON--CYTOCHROME-C-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"iron-cytochrome-c reductase activity","secondary_identifiers":["RHEA:15617"],"synonyms":[{"name":"ferrocytochrome-c:Fe3+ oxidoreductase activity","type":"related"},{"name":"iron-cytochrome c reductase activity","type":"related"}],"termid":"GO:0047726"}


id: GO:1990147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.","definition_xrefs":["GOC:hjd","PMID:23372168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"talin binding","termid":"GO:1990147"}


id: PBO:0028847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_splicing","termid":"PBO:0028847"}


id: PBO:0067851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 153","termid":"PBO:0067851"}


id: PBO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Cft1","termid":"PBO:0090030"}


id: PBO:0110873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, DDB1 and CUL4-associated factor Dca7, implicated in gene expression","termid":"PBO:0110873"}


id: GO:0031721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hemoglobin alpha chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobin binding","termid":"GO:0030492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"hemoglobin alpha binding","termid":"GO:0031721"}


id: GO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: PBO:0085335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine synthase; functions in phospholipid biosynthesis; transcriptionally repressed by myo-inositol and choline","termid":"PBO:0085335"}


id: FYPO:0000232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring splits upon initiation of contraction during anaphase B, resulting in the formation of a primary ring that undergoes constriction and a secondary ring that does not constrict.","definition_xrefs":["PMID:18272786","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring morphology","termid":"FYPO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0004803"],"is_obsolete":false,"name":"split actomyosin contractile ring","synonyms":[{"name":"abnormal contractile ring contraction with contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting upon contraction","type":"related"},{"name":"cytokinesis defects, splitting of the actinomyosin ring","type":"related"},{"name":"split actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"split actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"split cytokinetic contractile ring","type":"exact"},{"name":"split mitotic contractile ring","type":"exact"}],"termid":"FYPO:0000232"}


id: GO:1990899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process following clipping in double-strand break processing of SPO11 induced breaks, where long-tract single-stranded 3'-end DNA is generated from naked (SPO11 has been removed) 5' ends.","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break resectioning (obsolete GO:1990899)","termid":"GO:1990899"}


id: PATO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keel-shaped","termid":"PATO:0002522"}


id: PBO:0072257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 32","termid":"PBO:0072257"}


id: GO:0075117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075117)","synonyms":[{"name":"downregulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"inhibition by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"negative regulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075117"}


id: GO:0061650
data:
  {"annotated_genes":["SJAG_00300","SJAG_04573","SJAG_01561","SJAG_05022","SJAG_00855","SJAG_01251","SJAG_01679","SJAG_02918","SJAG_00604","SJAG_05340","SJAG_04612","SJAG_00208","SJAG_01018","SJAG_02082","SJAG_00293","SJAG_04857","SJAG_00931"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061651"},{"annotations":[105898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141046"},{"annotations":[114481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"},{"annotations":[100598,92352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[112903,83993,84207,87393,98104,84365,104298,109111,98392,102565,98241,110394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of a ubiquitin-like protein (ULP) from one protein to another molecule, usually another protein, via the reaction X-SCP + Y = Y-SCP + X, where both the X-SCP and Y-SCP linkages are thioester bonds between the C-terminal amino acid of SCP and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00604":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01018":null,"SJAG_01251":null,"SJAG_01561":null,"SJAG_01679":null,"SJAG_02082":null,"SJAG_02918":null,"SJAG_04573":null,"SJAG_04612":null,"SJAG_04857":null,"SJAG_05022":null,"SJAG_05340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0019787","GO:0016740","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like protein conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"},{"name":"small conjugating protein conjugating enzyme activity","type":"exact"}],"termid":"GO:0061650","terms_by_termid":{"GO:0061631":null,"GO:0061651":null,"GO:0061654":null,"GO:0061656":null,"GO:0141046":null}}


id: PBO:0067261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 335, pseudogene","termid":"PBO:0067261"}


id: PBO:0053874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1150","termid":"PBO:0053874"}


id: SO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small temporal RNA (stRNA). Found in roundworm development.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stRNA_encoding","synonyms":[{"name":"stRNA encoding","type":"exact"}],"termid":"SO:0000656"}


id: GO:2000815
data:
  {"annotated_genes":["SJAG_03886","SJAG_05014","SJAG_02573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85974,86366,87668],"is_not":false,"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"A process of regulation of mRNA stability that is involved in a response to oxidative stress.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability involved in response to stress","termid":"GO:0010610"},{"relation_name":"part_of","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to oxidative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000815","terms_by_termid":{"GO:2000815":null}}


id: PBO:0088017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments","termid":"PBO:0088017"}


id: GO:0051101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA binding","termid":"GO:0051101"}


id: PBO:0044766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 50","termid":"PBO:0044766"}


id: GO:0010458
data:
  {"annotated_genes":["SJAG_03048","SJAG_03126","SJAG_01801","SJAG_04943","SJAG_00082","SJAG_01050","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98496,88978],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0001100"},{"annotations":[108083,86169,89896,98503],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031536"},{"annotations":[107135,113253],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0007096"}]},"cv_name":"biological_process","definition":"The cell cycle transition where a cell leaves M phase and enters a new G1 phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01050":null,"SJAG_01801":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04464":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"exit from mitosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"exit from mitotic division","type":"exact"},{"name":"mitotic exit","type":"exact"}],"termid":"GO:0010458","terms_by_termid":{"GO:0001100":null,"GO:0007096":null,"GO:0031536":null}}


id: PBO:0079999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 10","termid":"PBO:0079999"}


id: GO:0009367
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the cleavage of a Gly-Phe bond to release an N-terminal, basic peptide of 5-8 residues from type IV prepilin, and then N-methylates the new N-terminal amino group.","definition_xrefs":["EC:3.4.23.43"],"gene_count":0,"genotype_count":0,"name":"obsolete prepilin peptidase complex (obsolete GO:0009367)","synonyms":[{"name":"prepilin peptidase complex","type":"exact"}],"termid":"GO:0009367"}


id: FYPO:0004620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spindle disassembly is abnormal. Spindle disassembly is the controlled breakdown of the spindle.","definition_xrefs":["PomBase:mah","GO:0051230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle disassembly","termid":"FYPO:0004620"}


id: PBO:0077717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 3","termid":"PBO:0077717"}


id: GO:0010737
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97977],"is_not":false,"summary":null,"term":"GO:0010737"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with the activation of protein kinase A (PKA), and ends with the regulation of a downstream cellular process, e.g. transcription. The PKA catalytic subunit (PKA-C) is normally present in a complex with its regulatory subunit, PKA-R. The inhibitory action of PKA-R is released upon cAMP binding, which results in the activation of PKA-C.","definition_xrefs":["PMID:35252178","PMID:36431013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"protein kinase A signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PKA signaling cascade","type":"related"},{"name":"protein kinase A signal transduction","type":"exact"},{"name":"protein kinase A signaling cascade","type":"related"},{"name":"protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010737","terms_by_termid":{"GO:0010737":null}}


id: GO:1900257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of beta1-adrenergic receptor activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of beta1-adrenergic receptor activity (obsolete GO:1900257)","synonyms":[{"name":"down regulation of beta1 adrenoceptor","type":"exact"},{"name":"down regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"down-regulation of beta1 adrenoceptor","type":"exact"},{"name":"down-regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"downregulation of beta1 adrenoceptor","type":"exact"},{"name":"downregulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"inhibition of beta1 adrenoceptor","type":"exact"},{"name":"inhibition of beta1-adrenergic receptor activity","type":"narrow"},{"name":"negative regulation of beta1 adrenoceptor","type":"exact"}],"termid":"GO:1900257"}


id: PBO:0036386
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Saitoella complicata DPS1","termid":"PBO:0036386"}


id: PBO:0071123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 125","termid":"PBO:0071123"}


id: FYPO:0007018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 2'-O-methylguanosine is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal tRNA guanosine 2'-O-methylation","synonyms":[{"name":"normal 2'-O-methylguanosine level in tRNA","type":"related"},{"name":"normal tRNA 2'-O-methylguanosine formation","type":"exact"},{"name":"normal tRNA Gm formation","type":"exact"},{"name":"normal tRNA guanosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA guanosine 2'-O-methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007018"}


id: PBO:0042552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 15","termid":"PBO:0042552"}


id: GO:0030680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex that contains a single RNA molecule that is necessary and usually sufficient for catalysis, and a single protein molecule. Examples of this complex are found in Bacterial species.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease P complex","termid":"GO:0030677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dimeric ribonuclease P complex","synonyms":[{"name":"dimeric RNase P complex","type":"exact"}],"termid":"GO:0030680"}


id: PBO:0081138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP36 ring finger protein like 1","termid":"PBO:0081138"}


id: PBO:0004177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor, Arf family Arf1","termid":"PBO:0004177"}


id: GO:0090447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = CoA + a 2-acyl-sn-glycerol 3-phosphate.","definition_xrefs":["RHEA:33559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate 2-O-acyltransferase activity","secondary_identifiers":["EC:2.3.1.198"],"termid":"GO:0090447"}


id: GO:0048153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S100 alpha protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete S100 alpha biosynthetic process (obsolete GO:0048153)","synonyms":[{"name":"S100 alpha anabolism","type":"exact"},{"name":"S100 alpha biosynthesis","type":"exact"},{"name":"S100 alpha formation","type":"exact"},{"name":"S100 alpha synthesis","type":"exact"}],"termid":"GO:0048153"}


id: GO:0004084
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052656"},{"annotations":[106562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052654"},{"annotations":[106564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid.","definition_xrefs":["EC:2.6.1.42","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"branched-chain-amino-acid transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70723","Reactome:R-HSA-70724","Reactome:R-HSA-508189","Reactome:R-HSA-508179"],"synonyms":[{"name":"L-branched chain amino acid aminotransferase activity","type":"related"},{"name":"branched-chain amino acid aminotransferase activity","type":"exact"},{"name":"branched-chain amino acid-glutamate transaminase activity","type":"related"},{"name":"branched-chain aminotransferase activity","type":"related"},{"name":"branched-chain-amino-acid:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"glutamate-branched-chain amino acid transaminase activity","type":"related"},{"name":"transaminase B activity","type":"related"}],"termid":"GO:0004084","terms_by_termid":{"GO:0052654":null,"GO:0052655":null,"GO:0052656":null}}


id: PBO:0064493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit F","termid":"PBO:0064493"}


id: PBO:0070739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 9","termid":"PBO:0070739"}


id: PBO:0064548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 10, pseudogene","termid":"PBO:0064548"}


id: FYPO:0000093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an arsenic-containing substance. Cells stop growing (and may die) at a concentration of arsenic that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to arsenic","synonyms":[{"name":"hypersensitive to arsenic","type":"exact"},{"name":"sensitive to arsenic during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenic during vegetative growth","type":"exact"},{"name":"sensitive to arsenic molecular entity","type":"exact"},{"name":"sensitive to arsenic-containing substance","type":"exact"}],"termid":"FYPO:0000093"}


id: GO:0046828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of movement of RNA from the cytoplasm to the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"regulation of RNA import into nucleus","synonyms":[{"name":"regulation of RNA import into cell nucleus","type":"exact"},{"name":"regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046828"}


id: PBO:0059792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 18","termid":"PBO:0059792"}


id: PR:Q9UTM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02037","PRO:DNx","PANTHER:PTHR10855:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn5 (Schizosaccharomyces pombe 972h-)","secondary_identifiers":["UniProtKB:Q9UTM3"],"synonyms":[{"name":"Spom972h-PSMD12","type":"exact"}],"termid":"PR:Q9UTM3"}


id: PBO:0058642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6771","termid":"PBO:0058642"}


id: GO:0070099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070099"}


id: GO:0141146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of a host tissue. This can occur via the disruption of the extracellular matrix, or the detachment of cells from the extracellular matrix, or the dissociation of the cells composing that tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26355030","PMID:11982763","PMID:14651638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host tissue","synonyms":[{"name":"cytopathogenic effect","type":"related"}],"termid":"GO:0141146"}


id: GO:0030793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-demethylstaurosporine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + H+ + staurosporine.","definition_xrefs":["EC:2.1.1.139","RHEA:11696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3'-demethylstaurosporine O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.139-RXN","KEGG_REACTION:R05757"],"synonyms":[{"name":"3'-demethoxy-3'-hydroxystaurosporine O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3'-demethylstaurosporine O-methyltransferase activity","type":"related"},{"name":"staurosporine synthase activity","type":"related"}],"termid":"GO:0030793"}


id: FYPO:0000499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitophagy","synonyms":[{"name":"abolished autophagy of mitochondrion","type":"exact"},{"name":"absent mitophagy","type":"exact"},{"name":"mitophagy abolished","type":"exact"},{"name":"mitophagy: absent","type":"related"}],"termid":"FYPO:0000499"}


id: GO:0003935
data:
  {"annotated_genes":["SJAG_00376","SJAG_04711"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83664,97272],"is_not":false,"summary":null,"term":"GO:0003935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 4 H2O = 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + formate + 3 H+ + 2 phosphate.","definition_xrefs":["EC:3.5.4.25","RHEA:23704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"GTP cyclohydrolase II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00425","MetaCyc:GTP-CYCLOHYDRO-II-RXN"],"synonyms":[{"name":"GTP 7,8-8,9-dihydrolase (diphosphate-forming)","type":"related"},{"name":"GTP-8-formylhydrolase activity","type":"related"},{"name":"guanosine triphosphate cyclohydrolase II","type":"related"}],"termid":"GO:0003935","terms_by_termid":{"GO:0003935":null}}


id: GO:0042651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any thylakoid.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic membrane","termid":"GO:0034357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid membrane","termid":"GO:0042651"}


id: FYPO:0004169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the population in which the cell is found is in stationary phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level in stationary phase","synonyms":[{"name":"decreased RNA accumulation in stationary phase","type":"related"},{"name":"decreased transcript level in stationary phase","type":"exact"},{"name":"reduced RNA level in stationary phase","type":"exact"}],"termid":"FYPO:0004169"}


id: PR:Q9P7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf4 gene.","definition_xrefs":["UniProtKB:Q9P7S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.09","synonyms":[{"name":"Spom972h-taf4","type":"exact"},{"name":"TBP-associated factor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S4"}


id: PBO:0064005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 39","termid":"PBO:0064005"}


id: GO:0033775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deoxysarpagine + H+ + NADPH + O2 = H2O + NADP+ + sarpagine.","definition_xrefs":["EC:1.14.14.136","RHEA:14237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"deoxysarpagine hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05828","MetaCyc:1.14.13.91-RXN"],"synonyms":[{"name":"10-deoxysarpagine,NADPH:oxygen oxidoreductase (10-hydroxylating) activity","type":"related"},{"name":"DOSH","type":"related"}],"termid":"GO:0033775"}


id: MOD:01229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to an L-iodohistidine.","definition_xrefs":["Unimod:129#H","PubMed:15627961","PubMed:2026710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoiodinated residue","termid":"MOD:00500"},{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-iodohistidine","synonyms":[{"name":"I1His","type":"exact"},{"name":"Iodination","type":"related"},{"name":"Iodo","type":"related"}],"termid":"MOD:01229"}


id: PBO:0041661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 6","termid":"PBO:0041661"}


id: PR:O60066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alkylated DNA repair protein alkB homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR16557:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate-dependent dioxygenase abh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.04c","secondary_identifiers":["UniProtKB:O60066"],"synonyms":[{"name":"SPBC13G1.04c","type":"related"},{"name":"Spom972h-ALKBH1","type":"exact"},{"name":"alkylated DNA repair protein alkB homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60066"}


id: GO:2000254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male germ cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"regulates","term_name":"male germ cell proliferation","termid":"GO:0002176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male germ cell proliferation","termid":"GO:2000254"}


id: PBO:0058074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4292","termid":"PBO:0058074"}


id: GO:0031970
data:
  {"annotated_genes":["SJAG_00480","SJAG_00230","SJAG_00576","SJAG_05398","SJAG_04116","SJAG_04533","SJAG_02229","SJAG_02524","SJAG_02038","SJAG_00668","SJAG_02656","SJAG_00564","SJAG_02917","SJAG_03199","SJAG_01949","SJAG_00196","SJAG_06440","SJAG_03574","SJAG_05261","SJAG_02744","SJAG_01560","SJAG_02887","SJAG_04208","SJAG_00449","SJAG_01140","SJAG_02592","SJAG_02360","SJAG_00687","SJAG_04008","SJAG_05199","SJAG_00455","SJAG_01996","SJAG_02504","SJAG_01647"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90508,112227,103288,103603,113163,113313,98341,100143,112897,105635,93280,94630,90582,98333,109245,96281,101009,111151,103594,102976,105367,105887,91110,103092,97403,94270,110772,84521,106496,101008,96196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005758"},{"annotations":[84848,86559,112388,88924],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of an organelle envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00230":null,"SJAG_00449":null,"SJAG_00455":null,"SJAG_00480":null,"SJAG_00564":null,"SJAG_00576":null,"SJAG_00668":null,"SJAG_00687":null,"SJAG_01140":null,"SJAG_01560":null,"SJAG_01647":null,"SJAG_01949":null,"SJAG_01996":null,"SJAG_02038":null,"SJAG_02229":null,"SJAG_02360":null,"SJAG_02504":null,"SJAG_02524":null,"SJAG_02592":null,"SJAG_02656":null,"SJAG_02744":null,"SJAG_02887":null,"SJAG_02917":null,"SJAG_03199":null,"SJAG_03574":null,"SJAG_04008":null,"SJAG_04116":null,"SJAG_04208":null,"SJAG_04533":null,"SJAG_05199":null,"SJAG_05261":null,"SJAG_05398":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle envelope lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organelle intermembrane space","type":"exact"}],"termid":"GO:0031970","terms_by_termid":{"GO:0005758":null,"GO:0042719":null}}


id: PBO:0057990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3914-2","termid":"PBO:0057990"}


id: GO:0018131
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxazole or thiazole, five-membered heterocyclic ring structures containing an oxygen and a sulfur, respectively, in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole or thiazole metabolic process","termid":"GO:0046484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxazole or thiazole biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxazole or thiazole anabolism","type":"exact"},{"name":"oxazole or thiazole biosynthesis","type":"exact"},{"name":"oxazole or thiazole formation","type":"exact"},{"name":"oxazole or thiazole synthesis","type":"exact"}],"termid":"GO:0018131","terms_by_termid":{"GO:0052837":null}}


id: GO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development","termid":"GO:0061062"}


id: GO:0004471
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114594],"is_not":false,"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.","definition_xrefs":["EC:1.1.1.38","EC:1.1.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malic enzyme activity","termid":"GO:0004470"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malate dehydrogenase (decarboxylating) (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00214","RHEA:12653","Reactome:R-HSA-9012268","GO:0004472","MetaCyc:1.1.1.39-RXN","GO:0016619"],"synonyms":[{"name":"'malic' enzyme","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating)","type":"related"},{"name":"NAD-linked malic enzyme","type":"related"},{"name":"NAD-malic enzyme activity","type":"broad"},{"name":"NAD-specific malic enzyme","type":"related"},{"name":"malate dehydrogenase (decarboxylating) activity","type":"related"},{"name":"malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"GO:0004471","terms_by_termid":{"GO:0004471":null}}


id: GO:1990253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of leucine.","definition_xrefs":["PMID:19033384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leucine starvation","termid":"GO:1990253"}


id: GO:1901323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythromycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to erythromycin","termid":"GO:1901323"}


id: PBO:0031444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_central_constriction","termid":"PBO:0031444"}


id: PBO:0040295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3","termid":"PBO:0040295"}


id: PBO:0059729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 3","termid":"PBO:0059729"}


id: GO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a fungal-type vacuole membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of fungal-type vacuolar membrane (obsolete GO:0071628)","termid":"GO:0071628"}


id: GO:0102360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose(2-) + 7,8-dihydroxycoumarin = UDP(3-) + 3-O-beta-D-glucosyl-daphnetin + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"daphnetin 3-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13452"],"termid":"GO:0102360"}


id: GO:0042779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA; may involve endonucleolytic or exonucleolytic cleavage, or both.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA 3'-trailer cleavage (obsolete GO:0042779)","synonyms":[{"name":"removal of tRNA 3'-trailer sequence","type":"exact"},{"name":"tRNA 3'-end cleavage","type":"exact"}],"termid":"GO:0042779"}


id: PBO:0071315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27","termid":"PBO:0071315"}


id: PBO:0034657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_3'_overhang_length","termid":"PBO:0034657"}


id: PBO:0072924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 5","termid":"PBO:0072924"}


id: PBO:0066848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 148","termid":"PBO:0066848"}


id: GO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine secretion","termid":"GO:0048243"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"norepinephrine secretion, neurotransmission","synonyms":[{"name":"noradrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061533"}


id: FYECO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethylene glycol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethylene glycol","termid":"FYECO:0000325"}


id: PBO:0078967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 6-1","termid":"PBO:0078967"}


id: GO:0030950
data:
  {"annotated_genes":["SJAG_04461","SJAG_02838","SJAG_00661","SJAG_02392","SJAG_03748","SJAG_00152","SJAG_00030","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84661,85611,91993,95453,96301,100761,101463,106886],"is_not":false,"summary":null,"term":"GO:0030950"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of actin cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030950","terms_by_termid":{"GO:0030950":null}}


id: PBO:0042221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 2","termid":"PBO:0042221"}


id: PBO:0111856
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0111856"}


id: GO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anticonvulsant stimulus, a drug used to prevent seizures or reduce their severity.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anticonvulsant","termid":"GO:0036277"}


id: PBO:0055888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8D divergent transcript","termid":"PBO:0055888"}


id: GO:0006020
data:
  {"annotated_genes":["SJAG_03739","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111161],"is_not":false,"summary":null,"term":"GO:0006020"},{"annotations":[65174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Inositol"],"synonyms":[{"name":"inositol metabolism","type":"exact"},{"name":"myo-inositol metabolic process","type":"narrow"},{"name":"myo-inositol metabolism","type":"narrow"},{"name":"vitamin Bh metabolic process","type":"exact"},{"name":"vitamin Bh metabolism","type":"exact"}],"termid":"GO:0006020","terms_by_termid":{"GO:0006020":null,"GO:0006021":null}}


id: FYPO:0006522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after arrest at the mitotic G2/M phase transition of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:11598020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"decreased viability following cell cycle arrest in mitotic G2 phase","type":"exact"},{"name":"loss of cell population viability following cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"loss of viability following mitotic G2/M arrest","type":"exact"},{"name":"loss of viability of mitotic G2-arrested cells","type":"related"},{"name":"reduced viability following cell cycle arrest at mitotic G2/M phase transition","type":"related"}],"termid":"FYPO:0006522"}


id: FYPO:0007376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations entirely loses heterochromatic structure.","definition_xrefs":["PMID:29899117","PMID:31278118","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0007477"}],"interesting_parent_ids":["FYPO:0007477","FYPO:0001985"],"is_obsolete":false,"name":"abolished epigenetic heterochromatin inheritance","synonyms":[{"name":"abolished PEV","type":"related"},{"name":"abolished epigenetic heterochromatin propagation","type":"exact"},{"name":"abolished epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007376"}


id: FYPO:0007212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at heterochromatin islands is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at heterochromatin island","synonyms":[{"name":"decreased chromatin silencing at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at heterochromatin island during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at heterochromatin island","type":"exact"}],"termid":"FYPO:0007212"}


id: GO:0010831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotube differentiation","termid":"GO:0010831"}


id: PBO:0076995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP9 antisense RNA 1","termid":"PBO:0076995"}


id: PBO:0047422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 11 pseudogene 1","termid":"PBO:0047422"}


id: PBO:0013801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase Arg12","termid":"PBO:0013801"}


id: GO:0004931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when ATP is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["GOC:mah","PMID:9755289","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"extracellularly ATP-gated monoatomic cation channel activity","secondary_identifiers":["Reactome:R-HSA-877187"],"synonyms":[{"name":"P2X receptor","type":"related"},{"name":"extracellularly ATP-gated cation channel activity","type":"broad"},{"name":"purinoceptor","type":"broad"},{"name":"purinoreceptor","type":"broad"}],"termid":"GO:0004931"}


id: PBO:0058580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6529","termid":"PBO:0058580"}


id: PBO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Bet3 (predicted)","termid":"PBO:0001689"}


id: GO:0071811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of fever generation via positive regulation of the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of prostaglandin biosynthetic process","termid":"GO:0031394"},{"relation_name":"is_a","term_name":"positive regulation of fever generation","termid":"GO:0031622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of fever generation by positive regulation of prostaglandin biosynthesis","termid":"GO:0071811"}


id: PBO:0083722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-I subunit required to stabilize ESCRT-I core complex oligomers; the ESCRT-I core complex (Stp22p, Vps28p, Srn2p) is involved in ubiquitin-dependent sorting of proteins into the endosome; deletion mutant is sensitive to rapamycin and nystatin","termid":"PBO:0083722"}


id: PBO:0065251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20D","termid":"PBO:0065251"}


id: GO:0120280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cilary pro-basal body is an immature, partially assembled form of a ciliary basal body found next to the basal body of a cilium. Pro-basal bodies are not capable of nucleating a cilium. As the cell progresses through the cell cycle, continuing assembly will convert the pro-basal body into a mature basal body that is capable of nucleating a cilium.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary pro-basal body","synonyms":[{"name":"flagellar pro-basal body","type":"exact"},{"name":"flagellar probasal body","type":"exact"},{"name":"pro-basal body","type":"broad"},{"name":"pro-centriole","type":"broad"},{"name":"probasal body","type":"broad"}],"termid":"GO:0120280"}


id: PBO:0089438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex subunit Raf2","termid":"PBO:0089438"}


id: GO:0044290
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space bounded by the mitochondrial cristae membranes, continuous with the intermembrane space.","definition_xrefs":["NIF_Subcellular:sao508958414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrion","termid":"GO:0005739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial intracristal space","termid":"GO:0044290"}


id: SO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the V-heptamer and the V-nonamer of a V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_spacer","synonyms":[{"name":"V spacer","type":"exact"},{"name":"V-SPACER","type":"exact"}],"termid":"SO:0000537"}


id: PBO:0038762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 7","termid":"PBO:0038762"}


id: PBO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP38 divergent transcript","termid":"PBO:0080076"}


id: GO:1905111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","PMID:22161164","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pulmonary blood vessel remodeling","termid":"GO:1905109"},{"relation_name":"is_a","term_name":"positive regulation of blood vessel remodeling","termid":"GO:2000504"},{"relation_name":"positively_regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"activation of pulmonary blood vessel remodeling","type":"narrow"},{"name":"positive regulation of pulmonary blood vessel remodelling","type":"exact"},{"name":"up regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"up-regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"upregulation of pulmonary blood vessel remodeling","type":"exact"}],"termid":"GO:1905111"}


id: PBO:0060272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 7","termid":"PBO:0060272"}


id: PBO:0077689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 1","termid":"PBO:0077689"}


id: PBO:0109220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6S antisense RNA 1","termid":"PBO:0109220"}


id: PBO:0080304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 68 pseudogene","termid":"PBO:0080304"}


id: SO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting element found in the 3' UTR of some mRNA which is bound by the Drosophila Bruno protein and its homologs.","definition_xrefs":["PMID:10893231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruno_response_element","synonyms":[{"name":"BRE","type":"related"},{"name":"Bruno response element","type":"exact"}],"termid":"SO:0001181"}


id: PBO:0079995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 33","termid":"PBO:0079995"}


id: GO:1905858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heparan sulfate proteoglycan binding.","definition_xrefs":["PMID:7683668","GO_REF:0000059","GOC:aruk","GOC:bc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate proteoglycan binding","synonyms":[{"name":"regulation of heparin proteoglycan binding","type":"related"}],"termid":"GO:1905858"}


id: SO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2A modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2A_acetylation_site","synonyms":[{"name":"H2Aac","type":"exact"},{"name":"histone 2A acetylation site","type":"exact"}],"termid":"SO:0002142"}


id: PBO:0004657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf4","termid":"PBO:0004657"}


id: PBO:0063447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 7B","termid":"PBO:0063447"}


id: GO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating type switching","synonyms":[{"name":"activation of mating type switching","type":"narrow"},{"name":"stimulation of mating type switching","type":"narrow"},{"name":"up regulation of mating type switching","type":"exact"},{"name":"up-regulation of mating type switching","type":"exact"},{"name":"upregulation of mating type switching","type":"exact"}],"termid":"GO:0031496"}


id: PBO:0090372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type ATPase, calcium transporting Pmr1","termid":"PBO:0090372"}


id: GO:0048891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lateral line ganglion neuron.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"},{"relation_name":"part_of","term_name":"lateral line ganglion development","termid":"GO:0048890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line ganglion neuron differentiation","synonyms":[{"name":"gLL neuron differentiation","type":"exact"}],"termid":"GO:0048891"}


id: PBO:0079046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 2-1","termid":"PBO:0079046"}


id: GO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of heparan sulfate; can degrade both heparan sulfate and heparin glycosaminoglycan chains.","definition_xrefs":["PMID:10916150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"heparanase activity","secondary_identifiers":["Reactome:R-HSA-1667005"],"synonyms":[{"name":"heparinase activity","type":"related"}],"termid":"GO:0030305"}


id: PBO:0005879
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein in cox1 intron-1","termid":"PBO:0005879"}


id: PBO:0082219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport","termid":"PBO:0082219"}


id: PBO:0005628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-Mg/Pi carrier (predicted)","termid":"PBO:0005628"}


id: PBO:0041557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 47","termid":"PBO:0041557"}


id: PBO:0031797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G2/M_phase_transition_(obsolete_FYPO:0000404)","termid":"PBO:0031797"}


id: GO:0051229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"is_a","term_name":"spindle disassembly","termid":"GO:0051230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"meiotic spindle disassembly","synonyms":[{"name":"meiotic spindle breakdown","type":"exact"},{"name":"meiotic spindle catabolism","type":"exact"},{"name":"meiotic spindle degradation","type":"exact"},{"name":"spindle breakdown during meiosis","type":"exact"},{"name":"spindle degradation during meiosis","type":"exact"},{"name":"spindle disassembly during meiosis","type":"exact"}],"termid":"GO:0051229"}


id: PBO:0043345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClpB family mitochondrial disaggregase","termid":"PBO:0043345"}


id: FYPO:0002110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable tapered cell","termid":"FYPO:0002108"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"viable tapered vegetative cell","synonyms":[{"name":"viable bottle-shaped vegetative cell","type":"exact"},{"name":"viable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable bottle/skittle vegetative cell","type":"exact"},{"name":"viable skittle-shaped vegetative cell","type":"exact"},{"name":"viable tapered cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002110"}


id: GO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.153","RHEA:21292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity","secondary_identifiers":["Reactome:R-HSA-9664940","Reactome:R-HSA-1839091","Reactome:R-HSA-5637801","Reactome:R-HSA-2730870","Reactome:R-HSA-2076220","Reactome:R-HSA-5654692","Reactome:R-HSA-1839107","Reactome:R-HSA-201510","Reactome:R-HSA-5655290","Reactome:R-HSA-9665407","Reactome:R-HSA-5655323","Reactome:R-HSA-8852019","Reactome:R-HSA-5654705","Reactome:R-HSA-5654717","Reactome:R-HSA-1676048","Reactome:R-HSA-5655235","Reactome:R-HSA-9603445","Reactome:R-HSA-5654697","Reactome:R-HSA-9672162","Reactome:R-HSA-1250462","Reactome:R-HSA-437162","Reactome:R-HSA-1306979","Reactome:R-HSA-392300","Reactome:R-HSA-5654701","Reactome:R-HSA-5655289","Reactome:R-HSA-9021627","Reactome:R-HSA-389158","KEGG_REACTION:R04545","Reactome:R-HSA-2424480","Reactome:R-HSA-5218819","Reactome:R-HSA-186800","Reactome:R-HSA-5654690","Reactome:R-HSA-1306957","Reactome:R-HSA-177939","Reactome:R-HSA-9712084","Reactome:R-HSA-202365","Reactome:R-HSA-198266","Reactome:R-HSA-1250370","Reactome:R-HSA-5654709","Reactome:R-HSA-9664664","Reactome:R-HSA-2316434","Reactome:R-HSA-5654714","Reactome:R-HSA-9672177","Reactome:R-HSA-2029271","Reactome:R-HSA-2394007","Reactome:R-HSA-1226014","MetaCyc:2.7.1.153-RXN"],"synonyms":[{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase activity","type":"exact"},{"name":"type I phosphoinositide 3-kinase activity","type":"narrow"}],"termid":"GO:0046934"}


id: GO:0016453
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"},{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"C-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016453","terms_by_termid":{"GO:0003985":null}}


id: PBO:0044038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 10","termid":"PBO:0044038"}


id: PBO:0065231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 12","termid":"PBO:0065231"}


id: PBO:0056206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B1","termid":"PBO:0056206"}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: GO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corrin metabolic process","termid":"GO:0015009"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"corrin biosynthetic process","synonyms":[{"name":"corrin anabolism","type":"exact"},{"name":"corrin biosynthesis","type":"exact"},{"name":"corrin formation","type":"exact"},{"name":"corrin synthesis","type":"exact"}],"termid":"GO:0046140"}


id: PBO:0031415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle","termid":"PBO:0031415"}


id: GO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of testicular cells, an organelle derived from the spectrosome.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"testicular fusome organization","synonyms":[{"name":"testicular fusome organisation","type":"exact"},{"name":"testicular fusome organization and biogenesis","type":"related"}],"termid":"GO:0030724"}


id: GO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"pheromone metabolic process","termid":"GO:0042810"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044248"],"is_obsolete":false,"name":"pheromone catabolic process","secondary_identifiers":["GO:0046614","GO:0007327"],"synonyms":[{"name":"pheromone breakdown","type":"exact"},{"name":"pheromone catabolism","type":"exact"},{"name":"pheromone degradation","type":"exact"}],"termid":"GO:0042812"}


id: PBO:0054087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1440","termid":"PBO:0054087"}


id: PBO:0029696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_polymerase_II_core_promoter_proximal_region_sequence-specific_DNA_binding","termid":"PBO:0029696"}


id: SO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000066 gene_by_polyadenylation_attribute (obsolete SO:0000066)","termid":"SO:0000066"}


id: PR:O13898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ogm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.07c","synonyms":[{"name":"Spom972h-ogm1","type":"exact"}],"termid":"PR:O13898"}


id: PBO:0041316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 2","termid":"PBO:0041316"}


id: PBO:0084603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YML033W was originally annotated as an independent ORF, but was later demonstrated to be an exon of an adjacent ORF, YML034W","termid":"PBO:0084603"}


id: PBO:0028851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_UV","termid":"PBO:0028851"}


id: PBO:0067240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 311, pseudogene","termid":"PBO:0067240"}


id: PBO:0063005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2","termid":"PBO:0063005"}


id: PBO:0050902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha inducible protein 27 like 2","termid":"PBO:0050902"}


id: GO:0034384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle clearance","synonyms":[{"name":"HDL clearance","type":"exact"}],"termid":"GO:0034384"}


id: PBO:0029553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_ethyl_methanesulfonate","termid":"PBO:0029553"}


id: GO:0140599
data:
  {"annotated_genes":["SJAG_03200","SJAG_01374","SJAG_03729","SJAG_04148","SJAG_01745","SJAG_04578","SJAG_04284","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86295,87102,87479,92267,106545,106581,112158,112535],"is_not":false,"summary":null,"term":"GO:0140599"}]},"cv_name":"cellular_component","definition":"A nuclear membrane part at the midzone of the mitotic nuclear bridge. The midzone forms a bulge that is enriched in nuclear pores that lack baskets.","definition_xrefs":["PMID:32502403","PMID:25963819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge midzone","termid":"GO:0140512"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mitotic nuclear bridge midzone membrane domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140599","terms_by_termid":{"GO:0140599":null}}


id: GO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + methanol = H2O2 + formaldehyde.","definition_xrefs":["MetaCyc:METHANOL-OXIDASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete methanol oxidase activity (obsolete GO:0046563)","termid":"GO:0046563"}


id: PBO:0086314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with sequence similarity to acireductone synthases; involved in methionine salvage; found in both the cytoplasm and nucleus","termid":"PBO:0086314"}


id: GO:0055096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of low-density lipoprotein particle.","definition_xrefs":["PMID:16013438","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to low-density lipoprotein particle stimulus","termid":"GO:0071404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle mediated signaling","synonyms":[{"name":"low-density lipoprotein mediated signalling","type":"exact"},{"name":"low-density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"low-density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055096"}


id: PBO:0082308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor","termid":"PBO:0082308"}


id: GO:1990443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own threonine amino acid residues, or a threonine residue on an identical protein.","definition_xrefs":["PMID:7803855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine autophosphorylation","termid":"GO:1990443"}


id: GO:0010340
data:
  {"annotated_genes":["SJAG_01261","SJAG_02660","SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109649,102041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[84035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the carboxyl group of an acceptor molecule to form a methyl ester.","definition_xrefs":["PMID:17220201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_02660":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"carboxyl-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010340","terms_by_termid":{"GO:0004671":null,"GO:0018423":null}}


id: PBO:0089184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps51","termid":"PBO:0089184"}


id: PBO:0058080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4298","termid":"PBO:0058080"}


id: PBO:0040527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azurocidin 1 pseudogene 1","termid":"PBO:0040527"}


id: GO:1903655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 2 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:19328067"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903655)","termid":"GO:1903655"}


id: FYPO:0001948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased level of substance in cytosol","synonyms":[{"name":"increased cytosolic level of substance","type":"exact"},{"name":"increased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"increased level of substance in cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0001948"}


id: PBO:0089705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase beta subunit Atp2","termid":"PBO:0089705"}


id: GO:2001237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"negative regulation of extrinsic apoptosis","type":"narrow"},{"name":"negative regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001237"}


id: GO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of trophectoderm cells.","definition_xrefs":["GOC:dph","ISBN:0124020607","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cellular morphogenesis","synonyms":[{"name":"trophectoderm cellular morphogenesis","type":"exact"}],"termid":"GO:0001831"}


id: FYPO:0003169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell occurs to a greater extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased amino acid import during vegetative growth","synonyms":[{"name":"increased amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"increased amino acid import during mitotic cell cycle","type":"related"},{"name":"increased amino acid import into cell during vegetative growth","type":"exact"},{"name":"increased amino acid uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0003169"}


id: PR:P33532
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bsu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P33532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin B6 transporter bsu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.01","synonyms":[{"name":"Spom972h-bsu1","type":"exact"},{"name":"amiloride transporter car1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"changed amiloride resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vitamin B6 uptake protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P33532"}


id: GO:0019646
data:
  {"annotated_genes":["SJAG_00080","SJAG_05629","SJAG_03920","SJAG_00260","SJAG_01490","SJAG_07007","SJAG_MIT20","SJAG_00976","SJAG_01190","SJAG_01355","SJAG_MIT04","SJAG_02398","SJAG_02646","SJAG_MIT03","SJAG_01077","SJAG_02504","SJAG_01671","SJAG_07006","SJAG_00601","SJAG_02744","SJAG_00755","SJAG_03490","SJAG_01763","SJAG_04152","SJAG_MIT13"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112936,115130,115154,110348,111570,88094,115109,104404,112230,84392,110775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[108977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[112875,85362,109321,85002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[86147,109525,111216,113778,104081,115134,114246,100205,100608,112231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic electron transport chain","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006136","GO:0006137","GO:0006138"],"synonyms":[{"name":"NADH-O2 electron transport","type":"narrow"},{"name":"succinate-O2 electron transport","type":"narrow"},{"name":"ubiquinone-8-O2 electron transport","type":"narrow"}],"termid":"GO:0019646","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null}}


id: GO:0098685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse between the Schaffer collateral axon of a CA3 pyramidal cell and a CA1 pyramidal cell.","definition_xrefs":["PMID:16399689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer collateral - CA1 synapse","termid":"GO:0098685"}


id: PBO:0027348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_in_stationary_phase","termid":"PBO:0027348"}


id: PBO:0087698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; phosphorylated by Cdc28p; mutation in the human Orc6p is linked to Meier-Gorlin syndrome","termid":"PBO:0087698"}


id: GO:0005955
data:
  {"annotated_genes":["SJAG_03631","SJAG_03793"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109475,114655],"is_not":false,"summary":null,"term":"GO:0005955"}]},"cv_name":"cellular_component","definition":"A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin.","definition_xrefs":["PMID:26794871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03631":null,"SJAG_03793":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcineurin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase complex","type":"narrow"},{"name":"protein phosphatase type 2B complex","type":"exact"}],"termid":"GO:0005955","terms_by_termid":{"GO:0005955":null}}


id: PATO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001148 relative resistance value (obsolete PATO:0001148)","termid":"PATO:0001148"}


id: GO:0020011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plastid organelle found in apicomplexans.","definition_xrefs":["ISBN:0521664470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"apicoplast","secondary_identifiers":["Wikipedia:Apicoplast"],"termid":"GO:0020011"}


id: GO:0047393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 1,2-cyclic phosphate + H2O = glycerol 1-phosphate + H+.","definition_xrefs":["RHEA:16493","EC:3.1.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"glycerol-1,2-cyclic-phosphate 2-phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R02648","MetaCyc:3.1.4.42-RXN"],"synonyms":[{"name":"rac-glycerol 1:2-cyclic phosphate 2-phosphodiesterase activity","type":"related"},{"name":"rac-glycerol-1,2-cyclic-phosphate 2-glycerophosphohydrolase activity","type":"related"}],"termid":"GO:0047393"}


id: PBO:0059311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 2","termid":"PBO:0059311"}


id: RO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"relationship between a neuron and a neuron projection bundle (e.g.- tract or nerve bundle) that one or more of its projections travels through.\\n","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculates_with","termid":"RO:0002101"}


id: PBO:0111763
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone fold","termid":"PBO:0111763"}


id: GO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.","definition_xrefs":["PMID:15746074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light reaction","secondary_identifiers":["Wikipedia:Photolysis#Photolysis_in_photosynthesis","MetaCyc:PWY-101"],"synonyms":[{"name":"photolysis","type":"related"}],"termid":"GO:0019684"}


id: SO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA sequence produced from an aligment algorithm that uses multiple sequences as input.","direct_ancestors":[{"relation_name":"has_quality","term_name":"consensus","termid":"SO:0000993"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_mRNA","synonyms":[{"name":"consensus mRNA","type":"exact"}],"termid":"SO:0000995"}


id: PBO:0054257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1641","termid":"PBO:0054257"}


id: GO:0005039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor-associated factor activity (obsolete GO:0005039)","synonyms":[{"name":"death receptor-associated factor activity","type":"exact"}],"termid":"GO:0005039"}


id: PBO:0004479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sjogren's syndrome/scleroderma autoantigen 1 family (predicted)","termid":"PBO:0004479"}


id: GO:0006915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["ISBN:0198506732","GOC:ecd","PMID:18846107","GOC:dhl","GOC:go_curators","GOC:mtg_apoptosis","GOC:cjm","PMID:21494263","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process","secondary_identifiers":["GO:0008632","Wikipedia:Apoptosis","GO:0006917"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"apoptosis","type":"narrow"},{"name":"apoptosis activator activity","type":"related"},{"name":"apoptosis signaling","type":"narrow"},{"name":"apoptotic cell death","type":"exact"},{"name":"apoptotic program","type":"narrow"},{"name":"apoptotic programmed cell death","type":"exact"},{"name":"caspase-dependent programmed cell death","type":"related"},{"name":"cell suicide","type":"broad"},{"name":"cellular suicide","type":"broad"},{"name":"commitment to apoptosis","type":"related"},{"name":"induction of apoptosis","type":"related"},{"name":"induction of apoptosis by p53","type":"related"},{"name":"programmed cell death by apoptosis","type":"exact"},{"name":"signaling (initiator) caspase activity","type":"related"},{"name":"type I programmed cell death","type":"narrow"}],"termid":"GO:0006915"}


id: GO:0060674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the placenta over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"placenta blood vessel development","termid":"GO:0060674"}


id: PBO:0070529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 28","termid":"PBO:0070529"}


id: PBO:0078018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 8","termid":"PBO:0078018"}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: FYPO:0003988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has actin cortical patches in one or more abnormal locations.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized actin cortical patches","termid":"FYPO:0006771"},{"relation_name":"output_of","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"mislocalized actin cortical patches during vegetative growth","synonyms":[{"name":"abnormal actin cortical patch location during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch position during vegetative growth","type":"exact"},{"name":"mislocalised actin cortical patches during vegetative growth","type":"exact"},{"name":"mislocalized F-actin patches during vegetative growth","type":"exact"},{"name":"mislocalized actin cortical patches during mitotic cell cycle","type":"related"},{"name":"mislocalized actin patches during vegetative growth","type":"exact"}],"termid":"FYPO:0003988"}


id: PBO:0011120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A regulator, PTPA family Ypa1","termid":"PBO:0011120"}


id: GO:0043981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K5 acetylation (obsolete GO:0043981)","synonyms":[{"name":"histone H4 acetylation at K5","type":"exact"}],"termid":"GO:0043981"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_04640","SJAG_03023","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88687,101691],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[87812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225542","GOC:krc","PMID:15225544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: PBO:0081898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 849, pseudogene","termid":"PBO:0081898"}


id: PBO:0052411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 5","termid":"PBO:0052411"}


id: GO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: CDP-acylglycerol + arachidonyl-CoA = CDP-diacylglycerol + CoA.","definition_xrefs":["MetaCyc:2.3.1.70-RXN","EC:2.3.1.70"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP-acylglycerol O-arachidonoyltransferase activity (obsolete GO:0047193)","synonyms":[{"name":"CDP-acylglycerol O-arachidonoyltransferase activity","type":"exact"},{"name":"CDP-acylglycerol O-arachidonyltransferase activity","type":"exact"},{"name":"CDPacylglycerol O-arachidonyltransferase activity","type":"related"},{"name":"arachidonoyl-CoA:CDP-acylglycerol O-arachidonoyltransferase activity","type":"related"},{"name":"arachidonyl-CoA:CDP-acylglycerol O-arachidonyltransferase activity","type":"related"}],"termid":"GO:0047193"}


id: PBO:0086182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; required for gluconeogenic gene activation","termid":"PBO:0086182"}


id: GO:0042839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:mah","GOC:jsg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-glucuronate metabolic process","synonyms":[{"name":"D-glucuronate metabolism","type":"exact"}],"termid":"GO:0042839"}


id: PBO:0091394
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small conserved C term region SMGDKMKGNMEKMAGKLTRDPELVQKGEDLKTG","termid":"PBO:0091394"}


id: PBO:0111936
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKC subfamily","termid":"PBO:0111936"}


id: GO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming distinct miRNA isoforms from a mature miRNA that differ at their 3'-ends.","definition_xrefs":["PMID:22055292","PMID:22055293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA processing","termid":"GO:0031054"},{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"},{"relation_name":"part_of","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pre-miRNA 3'-end processing","synonyms":[{"name":"mature miRNA 3'-end processing","type":"related"},{"name":"miRNA 3' end terminal trimming","type":"broad"},{"name":"miRNA 3'-end processing","type":"broad"},{"name":"miRNA trimming","type":"broad"}],"termid":"GO:0044747"}


id: GO:0032299
data:
  {"annotated_genes":["SJAG_01884","SJAG_02039","SJAG_00400"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84499,94261,99077],"is_not":false,"summary":null,"term":"GO:0032299"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses ribonuclease H activity, in which the catalytic subunit is a member of the RNase H2 (or HII) class. For example, in Saccharomyces the complex contains Rnh201p, Rnh202p and Rnh203p.","definition_xrefs":["GOC:mah","PMID:14734815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribonuclease H2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase H2 complex","type":"exact"}],"termid":"GO:0032299","terms_by_termid":{"GO:0032299":null}}


id: PATO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spiny","termid":"PATO:0001365"}


id: PBO:0043241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 1","termid":"PBO:0043241"}


id: GO:0001405
data:
  {"annotated_genes":["SJAG_01615","SJAG_04432","SJAG_02077","SJAG_04014","SJAG_01597","SJAG_00373"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85709,95371,96444,99411,105999,107921],"is_not":false,"summary":null,"term":"GO:0001405"}]},"cv_name":"cellular_component","definition":"Protein complex located on the matrix side of the mitochondrial inner membrane and associated with the TIM23 mitochondrial import inner membrane translocase complex (GO:0005744); ATPase motor activity to drive import of proteins into the mitochondrial matrix.","definition_xrefs":["GOC:vw","GOC:mcc","PMID:14517234","PMID:14638855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"TIM23 mitochondrial import inner membrane translocase complex","termid":"GO:0005744"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_02077":null,"SJAG_04014":null,"SJAG_04432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"PAM complex, Tim23 associated import motor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAM complex","type":"exact"},{"name":"mitochondrial import motor","type":"exact"},{"name":"pre-sequence translocase-associated import motor","type":"exact"},{"name":"presequence translocase-associated import motor","type":"exact"}],"termid":"GO:0001405","terms_by_termid":{"GO:0001405":null}}


id: MOD:01593
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01593"}


id: PBO:0080003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 12","termid":"PBO:0080003"}


id: PBO:0110076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated protein","termid":"PBO:0110076"}


id: GO:0014001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sclerenchyma cell. A sclerenchyma cell is a plant cell with thick lignified walls, normally dead at maturity and specialized for structural strength. Includes fiber cells, that are greatly elongated; and sclereids, that are more isodiametric. Intermediate types exist. Cells may or may not be devoid of protoplasm at maturity. Cell form and size are variable.","definition_xrefs":["CL:0000276","PO:0000077","GOC:jid","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerenchyma cell differentiation","termid":"GO:0014001"}


id: PBO:0065855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB12, member RAS oncogene family","termid":"PBO:0065855"}


id: PBO:0058720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6848","termid":"PBO:0058720"}


id: PBO:0088884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II accessory factor, Cdc73 family","termid":"PBO:0088884"}


id: PBO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13/L16 (predicted)","termid":"PBO:0002365"}


id: FYPO:0000799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide. Cells stop growing (and may die) at a concentration of diamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to diamide","synonyms":[{"name":"hypersensitive to diamide","type":"exact"},{"name":"sensitive to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"sensitive to diamide during mitotic cell cycle","type":"related"},{"name":"sensitive to diamide during vegetative growth","type":"exact"}],"termid":"FYPO:0000799"}


id: GO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + 2-oxoglutarate + O2 = (3S)-3-hydroxy-L-histidyl-[protein] + succinate + CO2.","definition_xrefs":["PMID:21251231","RHEA:54256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"peptidyl-histidine dioxygenase activity","secondary_identifiers":["EC:1.14.11.79","MetaCyc:RXN-22839","Reactome:R-HSA-9630967","Reactome:R-HSA-9630993"],"synonyms":[{"name":"protein histidyl hydroxylase","type":"broad"},{"name":"protein-L-histidine (3S)-3-hydroxylase","type":"exact"}],"termid":"GO:0036139"}


id: FYPO:0002655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal, and the vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"has_part","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"},{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"is_a","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"enlarged exocytic vesicles present in increased numbers","synonyms":[{"name":"accumulation of enlarged exocytic vesicles","type":"related"},{"name":"additional enlarged exocytic vesicles present","type":"exact"},{"name":"enlarged exocytic vesicles present in greater numbers","type":"exact"},{"name":"enlarged exocytic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"enlarged exocytotic vesicles present in increased numbers","type":"exact"},{"name":"enlarged post-Golgi secretory vesicles present in increased numbers","type":"related"},{"name":"extra enlarged exocytic vesicles","type":"exact"}],"termid":"FYPO:0002655"}


id: PBO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible gene merge, unusual domain combination","termid":"PBO:0002450"}


id: PBO:0050128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 38","termid":"PBO:0050128"}


id: PBO:0054650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2055","termid":"PBO:0054650"}


id: GO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the labyrinthine layer of the placenta progresses, from its formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer development","termid":"GO:0060711"}


id: PBO:0079773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose ceramide glucosyltransferase","termid":"PBO:0079773"}


id: PBO:0059988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 8","termid":"PBO:0059988"}


id: CHEBI:61049
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tacrolimus (anhydrous)","termid":"CHEBI:61049"}


id: FYPO:0002299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable germinated spores with curved germ tubes, and in which some cells divide once and others do not divide. In the cells that divide once, an inviable cell forms from the growing end of the germ tube, but does not divide further.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including divided and undivided germinated spores, with curved germ tubes (obsolete FYPO:0002299)","termid":"FYPO:0002299"}


id: GO:0016102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diterpenoid compounds, terpenoids with four isoprene units.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"diterpenoid biosynthetic process","synonyms":[{"name":"diterpene biosynthesis","type":"narrow"},{"name":"diterpene biosynthetic process","type":"narrow"},{"name":"diterpenoid anabolism","type":"exact"},{"name":"diterpenoid biosynthesis","type":"exact"},{"name":"diterpenoid formation","type":"exact"},{"name":"diterpenoid synthesis","type":"exact"}],"termid":"GO:0016102"}


id: PBO:0055350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2779","termid":"PBO:0055350"}


id: GO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont hormone or growth regulator levels (obsolete GO:0052184)","synonyms":[{"name":"modulation by organism of symbiont hormone or growth regulator levels","type":"exact"}],"termid":"GO:0052184"}


id: PBO:0076702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 3 pseudogene 1","termid":"PBO:0076702"}


id: GO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide biosynthetic process","synonyms":[{"name":"activation of antimicrobial peptide biosynthetic process","type":"narrow"},{"name":"stimulation of antimicrobial peptide biosynthetic process","type":"narrow"},{"name":"up regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"up-regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"upregulation of antimicrobial peptide biosynthetic process","type":"exact"}],"termid":"GO:0002807"}


id: PBO:0065666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRN2 antisense RNA 1","termid":"PBO:0065666"}


id: PBO:0047776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXC2 antisense RNA 1","termid":"PBO:0047776"}


id: PBO:0070374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 1","termid":"PBO:0070374"}


id: PBO:0088868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P2","termid":"PBO:0088868"}


id: PR:Q9P3U2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC328.04 gene.","definition_xrefs":["UniProtKB:Q9P3U2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C328.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.04","synonyms":[{"name":"Spom972h-SPAC328.04","type":"exact"}],"termid":"PR:Q9P3U2"}


id: GO:0034124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"regulation ofMyD88-dependent TLR signaling pathway","type":"exact"},{"name":"regulation ofMyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034124"}


id: PATO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000267 relative visual_acuity (obsolete PATO:0000267)","termid":"PATO:0000267"}


id: PBO:0053742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 968","termid":"PBO:0053742"}


id: PBO:0056786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 3","termid":"PBO:0056786"}


id: PBO:0086059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; has a putative RNA binding domain; interacts with Tma22p; null mutant exhibits translation defects; has homology to human oncogene MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0086059"}


id: PR:Q9HGL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Ts, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11741:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Ts, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.07c","secondary_identifiers":["UniProtKB:Q9HGL5"],"synonyms":[{"name":"EF-Ts (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"EF-TsMt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC800.07c","type":"related"},{"name":"Spom972h-TSFM","type":"exact"}],"termid":"PR:Q9HGL5"}


id: PBO:0081795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 725, pseudogene","termid":"PBO:0081795"}


id: PBO:0110332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 2","termid":"PBO:0110332"}


id: PBO:0067751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 50","termid":"PBO:0067751"}


id: GO:0097583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt1p-Pmt3p.","definition_xrefs":["GOC:jd","PMID:12551906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005789","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt1p-Pmt3p dimer complex","synonyms":[{"name":"Pmt1p-Pmt3p complex","type":"narrow"}],"termid":"GO:0097583"}


id: PBO:0054857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2271","termid":"PBO:0054857"}


id: PBO:0051738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6L antisense RNA 1","termid":"PBO:0051738"}


id: GO:0060039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery.","definition_xrefs":["PMID:15138308","PMID:16376438","GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardium development","termid":"GO:0060039"}


id: GO:0071034
data:
  {"annotated_genes":["SJAG_02622","SJAG_03984","SJAG_03939","SJAG_00701","SJAG_03745","SJAG_01830","SJAG_04321","SJAG_01521","SJAG_01064","SJAG_04360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89204,92057],"is_not":false,"summary":null,"term":"GO:0071034"},{"annotations":[99118,88387,111488,114198,95897,109387,108875,107981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cryptic unstable transcripts (CUTs).","definition_xrefs":["GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CUT metabolic process","termid":"GO:0071043"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01521":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04321":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CUT catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cryptic unstable transcript catabolic process","type":"exact"}],"termid":"GO:0071034","terms_by_termid":{"GO:0071034":null,"GO:0071039":null}}


id: PBO:0040558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNTL1 pseudogene 1","termid":"PBO:0040558"}


id: PBO:0063480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase like, testis expressed","termid":"PBO:0063480"}


id: PBO:0044705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX5 pseudogene 1","termid":"PBO:0044705"}


id: FYPO:0007985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly occurs earlier than normal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PMID:15068790","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eMTOC assembly","termid":"FYPO:0005690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"early eMTOC assembly","termid":"FYPO:0007985"}


id: FYPO:0003917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process during vegetative growth","termid":"FYPO:0002137"},{"relation_name":"is_a","term_name":"abnormal nonsense-mediated decay","termid":"FYPO:0003916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased nonsense-mediated decay","synonyms":[{"name":"decreased NMD","type":"exact"},{"name":"decreased nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"decreased nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"decreased nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"},{"name":"reduced nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003917"}


id: PATO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's having arrived at the onset of puberty (the age at which sex glands become functional) but not yet fully mature.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent","termid":"PATO:0000455"}


id: PBO:0066784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 82","termid":"PBO:0066784"}


id: PBO:0075405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 3","termid":"PBO:0075405"}


id: PBO:0073692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 4","termid":"PBO:0073692"}


id: PATO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001157 absolute concentration value (obsolete PATO:0001157)","termid":"PATO:0001157"}


id: GO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonyl-[acyl-carrier protein] = acetoacyl-[acyl-carrier protein] + CoA + CO2.","definition_xrefs":["EC:2.3.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-ketoacyl-acyl-carrier-protein synthase III activity","secondary_identifiers":["RHEA:12080","MetaCyc:2.3.1.180-RXN"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase III activity","type":"related"},{"name":"3-oxoacyl:ACP synthase III activity","type":"related"},{"name":"FabH","type":"related"},{"name":"KAS III","type":"related"},{"name":"KASIII","type":"related"},{"name":"acetyl-CoA:malonyl-acyl-carrier-protein C-acyltransferase activity","type":"related"},{"name":"beta-ketoacyl (acyl carrier protein) synthase III activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase III activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase III activity","type":"related"}],"termid":"GO:0033818"}


id: PBO:0013446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4","termid":"PBO:0013446"}


id: GO:0062235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal basal plate.","definition_xrefs":["PMID:30810527","PMID:23352055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"axonemal basal plate assembly","synonyms":[{"name":"axonemal basal plate formation","type":"narrow"},{"name":"axoneme basal plate assembly","type":"exact"},{"name":"basal plate assembly","type":"broad"}],"termid":"GO:0062235"}


id: PBO:0082552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central kinetochore protein and subunit of the Ctf19 complex; mutants have elevated rates of chromosome loss; orthologous to fission yeast kinetochore protein cnl2","termid":"PBO:0082552"}


id: PBO:0082104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; mutations in human PEX6 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082104"}


id: PBO:0048850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone receptor","termid":"PBO:0048850"}


id: GO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"negatively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage activation","synonyms":[{"name":"down regulation of macrophage activation","type":"exact"},{"name":"down-regulation of macrophage activation","type":"exact"},{"name":"downregulation of macrophage activation","type":"exact"},{"name":"inhibition of macrophage activation","type":"narrow"},{"name":"negative regulation of macrophage polarization","type":"exact"}],"termid":"GO:0043031"}


id: GO:0015748
data:
  {"annotated_genes":["SJAG_00589","SJAG_04370","SJAG_03172","SJAG_02897","SJAG_01225","SJAG_03710","SJAG_03644","SJAG_05268","SJAG_03338","SJAG_01095","SJAG_03452","SJAG_00276","SJAG_04325","SJAG_03851","SJAG_00835","SJAG_00576","SJAG_02581","SJAG_01116","SJAG_01470","SJAG_03746","SJAG_00154","SJAG_02050","SJAG_02516","SJAG_00612","SJAG_04328","SJAG_03503","SJAG_16459","SJAG_03334","SJAG_03416","SJAG_02943","SJAG_04406","SJAG_03741","SJAG_00760","SJAG_00669","SJAG_03721","SJAG_03050","SJAG_02957","SJAG_01731","SJAG_01229","SJAG_00232","SJAG_05209","SJAG_02114","SJAG_06440","SJAG_00018","SJAG_01945","SJAG_05325","SJAG_00230","SJAG_01960","SJAG_00587","SJAG_01305","SJAG_02132"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[98982,107015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[67875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[107016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[61270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035350"},{"annotations":[98716,98715,98717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001407"},{"annotations":[111267,63291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[96649,93632,103642,93693,100171,103771,97406,85403,94769,102852,87065,104772,112366,105651,101954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[97480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[107017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[107018,98983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[103684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[89038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[99771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[107019,61269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901679"},{"annotations":[89473,108381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[96317,98467,86686,86684,86682,94072,95601,86683,101188,86685,86689,86687,97408,86681,98344,105637,86688,90569,108617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[60631,64479,103144,93694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015914"},{"annotations":[92766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[95429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[108382,89474,89241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"}]},"cv_name":"biological_process","definition":"The directed movement of organophosphate esters into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organophosphate esters are small organic molecules containing phosphate ester bonds.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00154":null,"SJAG_00230":null,"SJAG_00232":null,"SJAG_00276":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00612":null,"SJAG_00669":null,"SJAG_00760":null,"SJAG_00835":null,"SJAG_01095":null,"SJAG_01116":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03334":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04370":null,"SJAG_04406":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_05325":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"organophosphate ester transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015748","terms_by_termid":{"GO:0001407":null,"GO:0015866":null,"GO:0015867":null,"GO:0015914":null,"GO:0017121":null,"GO:0035348":null,"GO:0035350":null,"GO:0035436":null,"GO:0045332":null,"GO:0120010":null,"GO:0140021":null,"GO:0140331":null,"GO:1901679":null,"GO:1903790":null,"GO:1990519":null,"GO:1990536":null,"GO:1990544":null,"GO:1990545":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0030575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_isoleucine_level","termid":"PBO:0030575"}


id: GO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of phosphatidylcholine-sterol O-acyltransferase.","definition_xrefs":["GOC:dph","GOC:BHF","PMID:4335615","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"phosphatidylcholine-sterol O-acyltransferase activator activity","synonyms":[{"name":"LCAT activator activity","type":"narrow"}],"termid":"GO:0060228"}


id: PBO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 1","termid":"PBO:0048145"}


id: FYPO:0006155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mating mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mating genes are normally transcribed during conjugation with cellular fusion (i.e. mating).","definition_xrefs":["PomBase:mah","PMID:19056896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mating gene mRNA during vegetative growth","synonyms":[{"name":"increased level of conjugation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mating gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of mating with cellular fusion gene mRNA during vegetative growth","type":"exact"},{"name":"increased mating gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006155"}


id: GO:0080018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an anthocyanin + UDP-D-glucose = an anthocyanin-5-O-glucoside + UDP.","definition_xrefs":["PMID:15807784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"anthocyanin 5-O-glucosyltransferase activity","termid":"GO:0080018"}


id: GO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte proliferation","termid":"GO:0050672"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"negatively_regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell proliferation","synonyms":[{"name":"down regulation of T cell proliferation","type":"exact"},{"name":"down-regulation of T cell proliferation","type":"exact"},{"name":"downregulation of T cell proliferation","type":"exact"},{"name":"inhibition of T cell proliferation","type":"narrow"},{"name":"negative regulation of T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of T-cell proliferation","type":"exact"},{"name":"negative regulation of T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042130"}


id: PBO:0056600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm1 nuclear protein","termid":"PBO:0056600"}


id: GO:0016674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or a related compound, oxygen, NAD, NADP, an iron-sulfur protein, disulfide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on sulfur group of donors, other acceptors (obsolete GO:0016674)","synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on sulphur group of donors, other acceptors","type":"exact"}],"termid":"GO:0016674"}


id: PBO:0083438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR072W; originally identified by fungal homology and RT-PCR","termid":"PBO:0083438"}


id: PBO:0040713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 antisense RNA 1","termid":"PBO:0040713"}


id: PBO:0086607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; gene expression induced in response to ketoconazole; YPL272C is not an essential gene","termid":"PBO:0086607"}


id: PBO:0073815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 17","termid":"PBO:0073815"}


id: PBO:0089632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm2","termid":"PBO:0089632"}


id: GO:0032228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"}


id: PBO:0004766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT II complex subunit Vps36","termid":"PBO:0004766"}


id: FYPO:0007580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during anaphase B of mitosis.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during anaphase","termid":"FYPO:0005211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"decreased protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"decreased protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic anaphase B","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during anaphase B","type":"exact"}],"termid":"FYPO:0007580"}


id: GO:1990739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of granulosa cells, resulting in the expansion of the granulosa cells population. A granulosa cell is a supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge.","definition_xrefs":["PMID:22383759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell proliferation","termid":"GO:1990739"}


id: GO:0034685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta6 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alphav-beta6 complex","synonyms":[{"name":"ITGAV-ITGB6 complex","type":"narrow"},{"name":"alphav-beta6 integrin complex","type":"exact"}],"termid":"GO:0034685"}


id: PBO:0066296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member X, pseudogene","termid":"PBO:0066296"}


id: PBO:0033772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pointed_nucleus_during_mitotic_interphase","termid":"PBO:0033772"}


id: GO:0080086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the filament over time, from its formation to the mature structure. Filament is the stalk of a stamen.","definition_xrefs":["PMID:19139039","PO:0009067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen filament development","synonyms":[{"name":"filament development","type":"exact"}],"termid":"GO:0080086"}


id: PBO:0064484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase lambda","termid":"PBO:0064484"}


id: PBO:0112468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2, for APC Ubc11/UbcP4","termid":"PBO:0112468"}


id: PBO:0081314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 98","termid":"PBO:0081314"}


id: GO:0033186
data:
  {"annotated_genes":["SJAG_02198","SJAG_02439","SJAG_04272"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90962,91210,103849],"is_not":false,"summary":null,"term":"GO:0033186"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). In many species the CAF-1 subunits are designated p150, p60, and p48.","definition_xrefs":["PMID:17065558","PMID:17083276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02198":null,"SJAG_02439":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CAF-1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromatin assembly factor 1 complex","type":"exact"}],"termid":"GO:0033186","terms_by_termid":{"GO:0033186":null}}


id: PBO:0048869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA4 antisense RNA 1","termid":"PBO:0048869"}


id: PBO:0039797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3","termid":"PBO:0039797"}


id: PBO:0029960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytochrome-c_oxidase_activity","termid":"PBO:0029960"}


id: PBO:0068601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 52, pseudogene","termid":"PBO:0068601"}


id: GO:0097685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow (or groove) found on a dinoflagellate apex. It typically loops around the apex.","definition_xrefs":["GOC:at","PMID:20561119","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"},{"relation_name":"part_of","term_name":"dinoflagellate epicone","termid":"GO:0097613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical groove","synonyms":[{"name":"apical groove","type":"broad"}],"termid":"GO:0097685"}


id: PBO:0070535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a","termid":"PBO:0070535"}


id: GO:0070108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"negatively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070108"}


id: GO:0051804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051804)","synonyms":[{"name":"activation of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"positive regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"},{"name":"stimulation of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"},{"name":"up-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"},{"name":"upregulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0051804"}


id: PBO:0089510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF5102 family conserved fungal protein, associated with clathrin coated vesicles","termid":"PBO:0089510"}


id: GO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIId subcomplex (obsolete GO:0030088)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"exact"}],"termid":"GO:0030088"}


id: PBO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 27","termid":"PBO:0071524"}


id: GO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai","LIGAND:C03367","PubChem_Compound:439991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose metabolic process","synonyms":[{"name":"6-alpha-maltosylglucose metabolism","type":"exact"},{"name":"isopanose metabolic process","type":"exact"},{"name":"isopanose metabolism","type":"exact"}],"termid":"GO:0051679"}


id: PBO:0083104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; structurally and functionally related to Pif1p","termid":"PBO:0083104"}


id: PBO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C14","termid":"PBO:0045226"}


id: PBO:0011423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0011423"}


id: GO:0014018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuroblast in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"neuroblast fate commitment","termid":"GO:0014017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate specification","termid":"GO:0014018"}


id: PBO:0074885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63","termid":"PBO:0074885"}


id: FYPO:0005865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 in silent mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"normal histone H3-K9 methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal silent mating-type cassette histone H3-K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005865"}


id: FYPO:0000813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which plasma membrane organization is abnormal. Plasma membrane organization results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0007009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal plasma membrane organization","synonyms":[{"name":"abnormal plasma membrane organisation","type":"exact"},{"name":"abnormal plasma membrane organization during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000813"}


id: SO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that reverts the sequence of a previous frameshift mutation back to the initial frame.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frame_restoring_variant","synonyms":[{"name":"frame restoring variant","type":"exact"}],"termid":"SO:0001591"}


id: SO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A haplotype is one of a set of coexisting sequence variants of a haplotype block.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"haplotype_block","termid":"SO:0000355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haplotype","secondary_identifiers":["http://en.wikipedia.org/wiki/Haplotype"],"termid":"SO:0001024"}


id: GO:0140049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocardial cushion to mesenchymal transition.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GOC:BHF","PMID:21778427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"regulates","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140049"}


id: SO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to a repeating unit made of a 2-deoxy-D-ribose ring connected to a phosphate backbone.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA","termid":"SO:0000352"}


id: PBO:0059303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49 pseudogene 2","termid":"PBO:0059303"}


id: FYPO:0006518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering G0 phase.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nitrogen starvation","termid":"FYPO:0001178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability in G0","synonyms":[{"name":"loss of viability in cell quiescence","type":"exact"},{"name":"loss of viability in quiescence","type":"exact"}],"termid":"FYPO:0006518"}


id: PBO:0017926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Shy1 (predicted)","termid":"PBO:0017926"}


id: GO:0062063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BBSome complex.","definition_xrefs":["PMID:20603001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BBSome binding","termid":"GO:0062063"}


id: GO:0045229
data:
  {"annotated_genes":["SJAG_04073","SJAG_01888","SJAG_05001","SJAG_02590","SJAG_03631","SJAG_01835","SJAG_04620","SJAG_03013","SJAG_03646","SJAG_00163","SJAG_01646","SJAG_04238","SJAG_02649","SJAG_01171","SJAG_00218","SJAG_01290","SJAG_01862","SJAG_02192","SJAG_00667","SJAG_01321","SJAG_00974","SJAG_03295","SJAG_03444","SJAG_02446","SJAG_01181","SJAG_04462","SJAG_04483","SJAG_00340","SJAG_01017","SJAG_02718","SJAG_04868","SJAG_01227","SJAG_03483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87912,84406,113873,86418,84896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[84476,96273,98073,104191,107436,85276,90168,98074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[110204,103900,98585,109483,87729,86097,93287,85511,94796,84265,91248,83638,84477,87991,90361,105428,86763,104513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[83784,107102,101453],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00218":null,"SJAG_00340":null,"SJAG_00667":null,"SJAG_00974":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01227":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01646":null,"SJAG_01835":null,"SJAG_01862":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03483":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_04073":null,"SJAG_04238":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04620":null,"SJAG_04868":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"external encapsulating structure organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"external encapsulating structure organisation","type":"exact"},{"name":"external encapsulating structure organization and biogenesis","type":"exact"}],"termid":"GO:0045229","terms_by_termid":{"GO:0030476":null,"GO:0031505":null,"GO:0060237":null,"GO:1904541":null}}


id: PBO:0110396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member A6","termid":"PBO:0110396"}


id: PBO:0073341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 3","termid":"PBO:0073341"}


id: FYPO:0001329
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is lower than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03689":null,"SJAG_04697":null},"genotype_count":2,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of substance in cell during vegetative growth","references_by_uniquename":{"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta","gms1delta"],"synonyms":[{"name":"decreased level of substance in cell during mitotic cell cycle","type":"related"},{"name":"reduced level of substance in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001329","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell of the intestine to attain its fully functional state. A columnar/cuboidal epithelial cell of the intestine mature as they migrate from the intestinal crypt to the villus.","definition_xrefs":["GOC:dph","PMID:18824147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell maturation","termid":"GO:0060574"}


id: PR:Q10426
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rik1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein rik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.08","synonyms":[{"name":"Spom972h-rik1","type":"exact"},{"name":"silencing protein rik1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10426"}


id: GO:0060301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the activity of a molecule that controls the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"},{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cytokine activity","termid":"GO:0060301"}


id: PBO:0039663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit beta 1","termid":"PBO:0039663"}


id: PBO:0064673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 8","termid":"PBO:0064673"}


id: PBO:0011151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0011151"}


id: PBO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 5","termid":"PBO:0050970"}


id: GO:0051694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a protein or protein complex to the pointed (or minus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament capping","termid":"GO:0051693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"pointed-end actin filament capping","synonyms":[{"name":"minus-end F-actin capping activity","type":"exact"},{"name":"minus-end actin filament capping activity","type":"exact"},{"name":"pointed-end F-actin capping activity","type":"exact"},{"name":"pointed-end actin capping activity","type":"exact"}],"termid":"GO:0051694"}


id: GO:0017163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transcription regulator activity that prevents or downregulates basal transcription. Basal transcription results from transcription that is controlled by the minimal complement of proteins necessary to reconstitute transcription from a minimal promoter.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete basal transcription repressor activity (obsolete GO:0017163)","synonyms":[{"name":"basal transcription repressor activity","type":"exact"}],"termid":"GO:0017163"}


id: GO:0061207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}


id: GO:1903150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any calcium ion transmembrane transporter activity that is involved in calcium ion import into cell.","definition_xrefs":["GO_REF:0000061","GOC:dos","ISBN:0-8249-3695-6","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium ion transmembrane transporter activity involved in calcium ion import into cell (obsolete GO:1903150)","synonyms":[{"name":"calcium ion transmembrane transporter activity involved in calcium ion import into cell","type":"exact"},{"name":"calcium ion transmembrane transporter activity involved in calcium ion uptake into cell","type":"exact"}],"termid":"GO:1903150"}


id: GO:0071661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granzyme B production","termid":"GO:0071661"}


id: PBO:0109467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone dehydrogenase 2","termid":"PBO:0109467"}


id: PBO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 31","termid":"PBO:0060011"}


id: PBO:0045502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSN1 component of MIS12 kinetochore complex","termid":"PBO:0045502"}


id: FYPO:0005039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071619","PomBase:mah","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during nitrogen starvation","termid":"FYPO:0005034"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen depletion","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II CTD serine 2 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005039"}


id: PBO:0056350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 7","termid":"PBO:0056350"}


id: PBO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh2 (predicted)","termid":"PBO:0010193"}


id: PBO:0027520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_phase","termid":"PBO:0027520"}


id: PBO:0075800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 like 2 pseudogene 1","termid":"PBO:0075800"}


id: PBO:0005100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal protein associated with endocytosis (predicted)","termid":"PBO:0005100"}


id: GO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylphylloquinone + S-adenosyl-L-methionine = phylloquinone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:14617060","MetaCyc:RXN-7569","MetaCyc:RXN-6723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"2-phytyl-1,4-naphthoquinone methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06859"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-phytyl-1,4-naphthoquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:salicylate carboxyl methyltransferase activity","type":"exact"},{"name":"SA methyltransferase activity","type":"broad"},{"name":"demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"salicylate methyltransferase activity","type":"broad"},{"name":"salicylic acid methyltransferase activity","type":"broad"}],"termid":"GO:0052624"}


id: GO:0051900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial depolarization","termid":"GO:0051900"}


id: GO:0061802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane in the part of a cell that is closest to the anterior as defined by the developing, or existing, anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:15666355","GOC:kmv","GOC:17981131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"anterior cell cortex","termid":"GO:0061802"}


id: PBO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 33","termid":"PBO:0051609"}


id: GO:0010795
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006744"],"is_obsolete":false,"name":"regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010795","terms_by_termid":{"GO:1904775":null}}


id: GO:0048219
data:
  {"annotated_genes":["SJAG_04739"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94242],"is_not":false,"summary":null,"term":"GO:0048219"}]},"cv_name":"biological_process","definition":"The directed movement of substances from one Golgi cisterna to another, mediated by small transport vesicles.","definition_xrefs":["GOC:jid","PMID:10219233","GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"inter-Golgi cisterna vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inter-Golgi cisterna transport","type":"exact"}],"termid":"GO:0048219","terms_by_termid":{"GO:0048219":null}}


id: GO:0005977
data:
  {"annotated_genes":["SJAG_03851","SJAG_00963","SJAG_06309","SJAG_00115","SJAG_01089","SJAG_02076","SJAG_02178","SJAG_04963","SJAG_01376","SJAG_01209","SJAG_01561","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110560,114576],"is_not":false,"summary":null,"term":"GO:0005977"},{"annotations":[105023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[99433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[94744,104771,105895,96412,86255,93749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[87093,77791],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy reserve metabolic process","termid":"GO:0006112"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00963":null,"SJAG_01089":null,"SJAG_01209":null,"SJAG_01376":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_02076":null,"SJAG_02178":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glycogen metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycogen metabolism","type":"exact"}],"termid":"GO:0005977","terms_by_termid":{"GO:0005977":null,"GO:0005978":null,"GO:0005980":null,"GO:0045719":null,"GO:0061723":null}}


id: PBO:0041774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 13","termid":"PBO:0041774"}


id: GO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of excretion","termid":"GO:0044062"}


id: FYPO:0006611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex less frequently than normal.","definition_xrefs":["PomBase:mah","PMID:29514920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"decreased frequency of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during transient localization to Cdr2 medial cortical node complex","type":"exact"},{"name":"decreased frequency of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"reduced frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006611"}


id: PBO:0065436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 9","termid":"PBO:0065436"}


id: PBO:0074328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4","termid":"PBO:0074328"}


id: RO:HOM0000023
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a lineage-specific duplication subsequent to a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_in-paralogy_relationship_with","synonyms":[{"name":"in-paralogous to","type":"exact"},{"name":"inparalogy","type":"exact"},{"name":"symparalogy","type":"exact"}],"termid":"RO:HOM0000023"}


id: GO:0106422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Zeaxanthin + O2 = (3R)-11-cis-3-hydroxyretinal + (3R)-all-trans-3-hydroxyretinal.","definition_xrefs":["PMID:19020100","PMID:19889630","RHEA:33931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid dioxygenase activity","termid":"GO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"carotenoid isomerooxygenase activity","secondary_identifiers":["EC:1.13.11.65"],"termid":"GO:0106422"}


id: GO:0150062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic pruning mediated by complement system signaling.","definition_xrefs":["PMID:22632727","PMID:18083105","GOC:bc","PMID:29844190","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement-mediated synapse pruning","synonyms":[{"name":"complement-dependent synapse pruning","type":"exact"},{"name":"synapse clearance","type":"broad"},{"name":"synapse disassembly","type":"broad"},{"name":"synapse elimination","type":"broad"},{"name":"synapse removal","type":"broad"}],"termid":"GO:0150062"}


id: GO:0005076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein serine/threonine kinase signaling protein activity (obsolete GO:0005076)","synonyms":[{"name":"receptor signaling protein serine/threonine kinase signaling protein activity","type":"exact"},{"name":"receptor signalling protein serine/threonine kinase signalling protein activity","type":"exact"}],"termid":"GO:0005076"}


id: PBO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 1","termid":"PBO:0039004"}


id: PBO:0088730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase The13","termid":"PBO:0088730"}


id: GO:1901650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actomyosin contractile ring localization (obsolete GO:1901650)","termid":"GO:1901650"}


id: GO:0099521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ATPase coupled ion transmembrane transporter activity, occurring in the presynaptic membrane, that is involved in regulation of presynaptic membrane potential.","definition_xrefs":["GOC:dos","PMID:17220883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"ATPase-coupled ion transmembrane transporter activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0099521"}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:als","PMID:22995177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: PBO:0075918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 10","termid":"PBO:0075918"}


id: PBO:0070612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 80","termid":"PBO:0070612"}


id: PBO:0030236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_calcium_level","termid":"PBO:0030236"}


id: GO:0140624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein catabolic pathway which selectively extracts ER-resident membrane proteins exported to the Golgi and endosomes for degradation by cytosolic proteasomes. It begins with phosphorylation of the ER-resident membrane protein, which triggers export of the protein from the ER to the Golgi and endosomes, followed by polyubiquitination by the Dsc E3 ubiquitin ligase complex and extraction of the ubiquitinated target, and ends with proteasomal degradation.","definition_xrefs":["PMID:31368600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"EGAD pathway","termid":"GO:0140624"}


id: GO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive sensory mechanical stimulus resulting from air flow, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["PMID:19279637","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of wind","synonyms":[{"name":"perception of wind","type":"exact"},{"name":"sensory perception of air flow","type":"exact"}],"termid":"GO:0071063"}


id: FYPO:0004950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, and the nucleus is longer than normal and undergoes oscillatory movement.","definition_xrefs":["PMID:16611238","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated vegetative cell with oscillating nucleus","termid":"FYPO:0005002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"elongated vegetative cell with elongated oscillating nucleus","synonyms":[{"name":"elongated cell with elongated oscillating nucleus during vegetative growth","type":"exact"},{"name":"elongated vegetative cell with elongated oscillating nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004950"}


