# terms

id: GO:0033428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"CAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamine tRNA","type":"related"}],"termid":"GO:0033428"}


id: PBO:0048502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 2","termid":"PBO:0048502"}


id: PBO:0031193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_double-strand_break_repair","termid":"PBO:0031193"}


id: PBO:0043845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPX chromosome region candidate 1","termid":"PBO:0043845"}


id: PBO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGinine requiring","termid":"PBO:0036483"}


id: PBO:0051494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 11","termid":"PBO:0051494"}


id: FYPO:0003683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of spliceosomal complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abnormal spliceosomal complex assembly","synonyms":[{"name":"abnormal spliceosomal complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spliceosomal complex assembly during vegetative growth","type":"exact"},{"name":"abnormal spliceosome assembly","type":"broad"}],"termid":"FYPO:0003683"}


id: PBO:0060992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHERF family PDZ scaffold protein 4","termid":"PBO:0060992"}


id: FYPO:0001347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any nucleic acid metabolic process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"nucleic acid metabolism phenotype during vegetative growth","synonyms":[{"name":"fission yeast nucleic acid metabolism phenotype during vegetative growth","type":"exact"},{"name":"nucleic acid metabolism phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001347"}


id: PBO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCRL4 pseudogene 1","termid":"PBO:0047464"}


id: PBO:0089043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and transfer glutaredoxin Grx5","termid":"PBO:0089043"}


id: PR:O14105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31G5.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.05c","synonyms":[{"name":"PPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC31G5.05c","type":"exact"},{"name":"pentose-5-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14105"}


id: PBO:0077338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 74B","termid":"PBO:0077338"}


id: PBO:0058944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 3","termid":"PBO:0058944"}


id: GO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a cysteine residue of a glycated protein.","definition_xrefs":["PMID:14568004","PMID:25416785","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine deglycation","synonyms":[{"name":"deglycation of N-acetylcysteine","type":"related"}],"termid":"GO:0036526"}


id: PBO:0067707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 5","termid":"PBO:0067707"}


id: PBO:0082221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha aminoadipate reductase; catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-semialdehyde, which is the fifth step in biosynthesis of lysine; activation requires posttranslational phosphopantetheinylation by Lys5p","termid":"PBO:0082221"}


id: PBO:0067591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 752, pseudogene","termid":"PBO:0067591"}


id: PBO:0042199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin F","termid":"PBO:0042199"}


id: PBO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer gamma subunit Sec21 (predicted)","termid":"PBO:0001018"}


id: PBO:0051722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor","termid":"PBO:0051722"}


id: PR:P22189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.06","synonyms":[{"name":"Spom972h-cta3","type":"exact"}],"termid":"PR:P22189"}


id: PBO:0084436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA; recycles glyoxylate generated during allantoin degradation; SWAT-GFP and mCherry fusion proteins localize to the cytosol; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0084436"}


id: GO:0007011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytoskeleton (obsolete GO:0007011)","synonyms":[{"name":"regulation of cytoskeleton","type":"exact"}],"termid":"GO:0007011"}


id: GO:0032450
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97725,97726],"is_not":false,"summary":null,"term":"GO:0032450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-maltose + H2O = 2 alpha-D-glucose.","definition_xrefs":["MetaCyc:RXN-2141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,4-glucosidase activity","termid":"GO:0004558"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"maltose alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-15910","EC:3.2.1.20"],"synonyms":[{"name":"maltase activity","type":"exact"}],"termid":"GO:0032450","terms_by_termid":{"GO:0032450":null}}


id: GO:0006257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUDP, deoxyuridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUDP metabolic process","termid":"GO:0046077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dUDP catabolic process","synonyms":[{"name":"dUDP breakdown","type":"exact"},{"name":"dUDP catabolism","type":"exact"},{"name":"dUDP degradation","type":"exact"}],"termid":"GO:0006257"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: PR:Q10198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein NDC80 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10643:SF0","OMA:SCHPO03670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein ndc80 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.03","secondary_identifiers":["UniProtKB:Q10198"],"synonyms":[{"name":"NMS complex subunit ndc80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDC80","type":"exact"}],"termid":"PR:Q10198"}


id: PBO:0074365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 3","termid":"PBO:0074365"}


id: PBO:0041128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 9","termid":"PBO:0041128"}


id: FYPO:0008027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the rate of acid phosphatase activation during phosphate starvation is increased.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of acid phosphatase activation during phosphate starvation","synonyms":[{"name":"increased acid phosphatase kinetics","type":"exact"}],"termid":"FYPO:0008027"}


id: GO:0009877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nitrogen-fixing root nodules on plant roots.","definition_xrefs":["PMID:21856632","PMID:33317178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nodulation","secondary_identifiers":["GO:0009878"],"synonyms":[{"name":"nodule development","type":"exact"},{"name":"nodule formation","type":"exact"},{"name":"nodule morphogenesis","type":"related"}],"termid":"GO:0009877"}


id: PBO:0059106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 2","termid":"PBO:0059106"}


id: GO:0050480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-(4-oxo-4,5-dihydro-1H-imidazol-5-yl)propanoic acid + H2O = N-formimidoyl-L-glutamate + H+.","definition_xrefs":["EC:3.5.2.7","RHEA:23660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"imidazolonepropionase activity","secondary_identifiers":["MetaCyc:IMIDAZOLONEPROPIONASE-RXN","KEGG_REACTION:R02288"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate amidohydrolase activity","type":"related"},{"name":"4(5)-imidazolone-5(4)-propionic acid hydrolase activity","type":"related"},{"name":"imidazolone propionic acid hydrolase activity","type":"related"},{"name":"imidazolone-5-propionate hydrolase activity","type":"related"}],"termid":"GO:0050480"}


id: PBO:0017743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent flavin oxidoreductase (predicted), possibly riboflavin reductase","termid":"PBO:0017743"}


id: GO:0090009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the primitive streak from unspecified parts. The primitive streak is a ridge of cells running along the midline of the embryo where the mesoderm ingresses. It defines the anterior-posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive streak formation","termid":"GO:0090009"}


id: GO:0009209
data:
  {"annotated_genes":["SJAG_02887","SJAG_00964","SJAG_05024","SJAG_00533","SJAG_03708","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89101,111033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[102632,89559,96200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate biosynthetic process","termid":"GO:0009201"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00533":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009209","terms_by_termid":{"GO:0006228":null,"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: PBO:0085984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; null mutant has decreased levels of cardiolipin and phosphatidylethanolamine; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085984"}


id: GO:0033738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydrofolate + oxidized ferredoxin = 5,10-methylenetetrahydrofolate + reduced ferredoxin.","definition_xrefs":["EC:1.5.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, iron-sulfur protein as acceptor","termid":"GO:0033694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (ferredoxin) activity","secondary_identifiers":["RHEA:14229","MetaCyc:RXN-5061"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"5-methyltetrahydrofolate:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0033738"}


id: GO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a cytosine residue to uridine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytidine to uridine editing","termid":"GO:0016554"}


id: PATO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001211 solid_angle_quantity (obsolete PATO:0001211)","termid":"PATO:0001211"}


id: GO:0015794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycerol-3-phosphate is transported across a membrane. Glycerol-3-phosphate is a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycerol-3-phosphate transmembrane transport","synonyms":[{"name":"glycerol-3-phosphate transport","type":"related"}],"termid":"GO:0015794"}


id: GO:1904651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17024416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of fat cell apoptotic process","termid":"GO:1904649"},{"relation_name":"positively_regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fat cell apoptotic process","synonyms":[{"name":"activation of adipocyte apoptosis","type":"narrow"},{"name":"activation of adipocyte apoptotic process","type":"narrow"},{"name":"activation of adipose cell apoptosis","type":"narrow"},{"name":"activation of adipose cell apoptotic process","type":"narrow"},{"name":"activation of fat cell apoptosis","type":"narrow"},{"name":"activation of fat cell apoptotic process","type":"narrow"},{"name":"positive regulation of adipocyte apoptosis","type":"narrow"},{"name":"positive regulation of adipocyte apoptotic process","type":"exact"},{"name":"positive regulation of adipose cell apoptosis","type":"narrow"},{"name":"positive regulation of adipose cell apoptotic process","type":"exact"},{"name":"positive regulation of fat cell apoptosis","type":"narrow"},{"name":"up regulation of adipocyte apoptosis","type":"narrow"},{"name":"up regulation of adipocyte apoptotic process","type":"exact"},{"name":"up regulation of adipose cell apoptosis","type":"narrow"},{"name":"up regulation of adipose cell apoptotic process","type":"exact"},{"name":"up regulation of fat cell apoptosis","type":"narrow"},{"name":"up regulation of fat cell apoptotic process","type":"exact"},{"name":"up-regulation of adipocyte apoptosis","type":"narrow"},{"name":"up-regulation of adipocyte apoptotic process","type":"exact"},{"name":"up-regulation of adipose cell apoptosis","type":"narrow"},{"name":"up-regulation of adipose cell apoptotic process","type":"exact"},{"name":"up-regulation of fat cell apoptosis","type":"narrow"},{"name":"up-regulation of fat cell apoptotic process","type":"exact"},{"name":"upregulation of adipocyte apoptosis","type":"narrow"},{"name":"upregulation of adipocyte apoptotic process","type":"exact"},{"name":"upregulation of adipose cell apoptosis","type":"narrow"},{"name":"upregulation of adipose cell apoptotic process","type":"exact"},{"name":"upregulation of fat cell apoptosis","type":"narrow"},{"name":"upregulation of fat cell apoptotic process","type":"exact"}],"termid":"GO:1904651"}


id: FYPO:0002391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal DNA repeat regions is decreased.","definition_xrefs":["PMID:24945319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at ncRNA genes","termid":"FYPO:0004346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at rDNA","secondary_identifiers":["FYPO:0006350"],"synonyms":[{"name":"decreased protein localisation to chromatin at rDNA","type":"exact"},{"name":"decreased protein localization to chromatin at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at rDNA during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at rRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ribosomal DNA","type":"exact"},{"name":"decreased protein localization to rDNA","type":"exact"},{"name":"reduced protein localization to chromatin at rDNA","type":"exact"}],"termid":"FYPO:0002391"}


id: PBO:0017661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex biquitin protein ligase E3 subunit Vps11 (predicted)","termid":"PBO:0017661"}


id: PBO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 21, pseudogene","termid":"PBO:0060584"}


id: PBO:0057169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320e","termid":"PBO:0057169"}


id: GO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of bud outgrowth involved in lung branching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"},{"relation_name":"negatively_regulates","term_name":"bud outgrowth involved in lung branching","termid":"GO:0060447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bud outgrowth involved in lung branching","termid":"GO:0061112"}


id: PBO:0041947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 7","termid":"PBO:0041947"}


id: GO:0102595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-glucoside-7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3-O-glucoside-7-O-(6-O-(4-O-(6-O-(p-hydroxybenzoyl)-glucosyl)-oxybenzoyl)-glucoside) + beta-D-glucose.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"cyanidin 7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) acyltransferase (acyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-15374"],"termid":"GO:0102595"}


id: GO:0043269
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87368,109485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion transport","type":"broad"}],"termid":"GO:0043269","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0042869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which aldarate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"aldarate transmembrane transport","synonyms":[{"name":"aldarate transport","type":"related"}],"termid":"GO:0042869"}


id: GO:0035505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin light chain kinase activity","termid":"GO:0035504"},{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myosin light chain kinase activity","termid":"GO:0035505"}


id: GO:1990824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that depends on magnesium in order for one or more of its components to remain a part of the complex.","definition_xrefs":["PMID:10220587"],"gene_count":0,"genotype_count":0,"name":"obsolete magnesium-dependent protein complex (obsolete GO:1990824)","termid":"GO:1990824"}


id: MOD:01210
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to the copper(1+) glutamate salt.","definition_xrefs":["Unimod:531#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) L-glutamate","synonyms":[{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"},{"name":"cuprous salt","type":"exact"}],"termid":"MOD:01210"}


id: PBO:0083377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified essential gene SUI3/YPL237W","termid":"PBO:0083377"}


id: FYPO:0005219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is shorter than normal.","definition_xrefs":["PMID:26582768","SO:0000673","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0003048"],"is_obsolete":false,"name":"decreased transcript length","synonyms":[{"name":"short transcript","type":"exact"},{"name":"shortened transcript","type":"exact"}],"termid":"FYPO:0005219"}


id: GO:0141203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents host complement activation by recruiting host proteases, destroying the complement before it has its effect on the symbiont.","definition_xrefs":["PMID:34305859","PMID:26945067","PMID:15792635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by activation of host proteases","synonyms":[{"name":"symbiont-mediated suppression of host complement activation by recruitment of host proteases","type":"narrow"}],"termid":"GO:0141203"}


id: GO:0046729
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable empty viral capsid produced during the assembly of viruses.","definition_xrefs":["ISBN:0072370319","ISBN:1555811272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral procapsid","termid":"GO:0046729"}


id: GO:0043536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell migration","termid":"GO:0010595"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell migration","synonyms":[{"name":"activation of blood vessel endothelial cell migration","type":"narrow"},{"name":"stimulation of blood vessel endothelial cell migration","type":"narrow"},{"name":"up regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"up-regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"upregulation of blood vessel endothelial cell migration","type":"exact"}],"termid":"GO:0043536"}


id: GO:0060506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein. This process contributes to lung development.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in lung development","synonyms":[{"name":"smoothened signalling pathway involved in lung development","type":"exact"},{"name":"hedgehog signaling pathway involved in lung development","type":"exact"},{"name":"hh signaling pathway involved in lung development","type":"exact"}],"termid":"GO:0060506"}


id: FYPO:0001992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is elongated, and is inviable. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell with mislocalized septum and anucleate compartment","termid":"FYPO:0001226"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate monoseptate vegetative cell","termid":"FYPO:0001917"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with abnormal septum","termid":"FYPO:0002889"},{"relation_name":"output_of","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000032","FYPO:0000641","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell with mislocalized septum","secondary_identifiers":["FYPO:0001993"],"synonyms":[{"name":"inviable elongated mononucleate cell with abnormal septum location","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal septum position","type":"exact"},{"name":"inviable elongated mononucleate cell with asymmetric septum","type":"exact"},{"name":"inviable elongated mononucleate cell with asymmetrically located septum","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalised septum","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalized septum during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate monoseptate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized septum and mislocalized nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized septum during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate vegetative cell with misplaced septum","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with single mislocalized septum","type":"exact"},{"name":"inviable long mononucleate cell with mislocalized septum","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell with mislocalized septum","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell with mislocalized septum","type":"exact"}],"termid":"FYPO:0001992"}


id: GO:0050449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = casbene + diphosphate.","definition_xrefs":["EC:4.2.3.8","RHEA:14901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"casbene synthase activity","secondary_identifiers":["KEGG_REACTION:R02064","MetaCyc:CASBENE-SYNTHASE-RXN"],"synonyms":[{"name":"casbene synthetase activity","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, casbene-forming)","type":"related"}],"termid":"GO:0050449"}


id: PBO:0049735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha 1","termid":"PBO:0049735"}


id: PBO:0000648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein","termid":"PBO:0000648"}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: PBO:0028229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_trehalose_level_during_cellular_response_to_salt_stress","termid":"PBO:0028229"}


id: GO:1902194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902194"}


id: PBO:0061134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME1-NME2 readthrough","termid":"PBO:0061134"}


id: GO:0019249
data:
  {"annotated_genes":["SJAG_02106","SJAG_04674","SJAG_02988","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58843,59840,60524,61994],"is_not":false,"summary":null,"term":"GO:0019249"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactate, the anion of lactic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactate biosynthetic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"lactate anabolism","type":"exact"},{"name":"lactate biosynthesis","type":"exact"},{"name":"lactate formation","type":"exact"},{"name":"lactate synthesis","type":"exact"}],"termid":"GO:0019249","terms_by_termid":{"GO:0019249":null}}


id: PBO:0046758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOG pseudogene 1","termid":"PBO:0046758"}


id: GO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prosaposin to initiate a change in cell activity. Prosaposin is the glycoprotein precursor of four cleavage products (saposins A, B, C and D).","definition_xrefs":["PMID:23690594","GOC:bf","GOC:PARL","PMID:9388493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prosaposin receptor activity","synonyms":[{"name":"prosaposin-activated receptor activity","type":"exact"}],"termid":"GO:0036505"}


id: PBO:0045838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 28","termid":"PBO:0045838"}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: PBO:0054209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1589","termid":"PBO:0054209"}


id: PBO:0046093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 4","termid":"PBO:0046093"}


id: GO:0014042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"positively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron maturation","synonyms":[{"name":"activation of neuron maturation","type":"narrow"},{"name":"stimulation of neuron maturation","type":"narrow"},{"name":"up regulation of neuron maturation","type":"exact"},{"name":"up-regulation of neuron maturation","type":"exact"},{"name":"upregulation of neuron maturation","type":"exact"}],"termid":"GO:0014042"}


id: GO:0032707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-23 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-23 production","termid":"GO:0032667"},{"relation_name":"negatively_regulates","term_name":"interleukin-23 production","termid":"GO:0032627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-23 production","secondary_identifiers":["GO:0045397"],"synonyms":[{"name":"down regulation of interleukin-23 production","type":"exact"},{"name":"down-regulation of interleukin-23 production","type":"exact"},{"name":"downregulation of interleukin-23 production","type":"exact"},{"name":"inhibition of interleukin-23 production","type":"narrow"},{"name":"negative regulation of IL-23 production","type":"exact"},{"name":"negative regulation of interleukin-23 biosynthetic process","type":"narrow"}],"termid":"GO:0032707"}


id: GO:0021822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intracellular signaling pathway that results in the cessation of cell movement involved in lamination of the cerebral cortex.","definition_xrefs":["GOC:dph","GOC:jid","PMID:12626695","GO_REF:0000021","GOC:tb","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"negatively_regulates","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"},{"relation_name":"part_of","term_name":"layer formation in cerebral cortex","termid":"GO:0021819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell motility involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"down regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"down-regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"downregulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"inhibition of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"narrow"},{"name":"negative regulation of cell locomotion involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"negative regulation of cell locomotion involved in cerebral cortex radial glia guided migration","type":"related"}],"termid":"GO:0021822"}


id: PBO:0053407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 342","termid":"PBO:0053407"}


id: PBO:0027291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_peroxidase_activity","termid":"PBO:0027291"}


id: PBO:0066563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 2","termid":"PBO:0066563"}


id: PBO:0041033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2C","termid":"PBO:0041033"}


id: PBO:0016570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin, mitochondrial membrane organization protein (predicted)","termid":"PBO:0016570"}


id: GO:0019874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,8-diazacyclotetradecane-2,9-dione + H2O = N-(6-aminohexanoyl)-6-aminohexanoate.","definition_xrefs":["EC:3.5.2.12","RHEA:16225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"6-aminohexanoate-cyclic-dimer hydrolase activity","secondary_identifiers":["MetaCyc:3.5.2.12-RXN","UM-BBD_reactionID:r1097","KEGG_REACTION:R03448"],"synonyms":[{"name":"1,8-diazacyclotetradecane-2,9-dione lactamhydrolase activity","type":"related"}],"termid":"GO:0019874"}


id: FYPO:0006218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to potassium ion starvation","synonyms":[{"name":"decreased growth during cellular response to potassium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to potassium ion starvation","type":"exact"},{"name":"hypersensitive to potassium ion starvation","type":"exact"},{"name":"reduced growth in low potassium","type":"related"},{"name":"sensitive to potassium ion depletion","type":"exact"},{"name":"sensitive to potassium ion deprivation","type":"exact"},{"name":"sensitive to potassium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to potassium starvation","type":"exact"}],"termid":"FYPO:0006218"}


id: GO:0098967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exocytic fusion of neurotransmitter receptor containing vesicles with the postsynaptic membrane resulting in the integration of NT receptors, enabling them to participate in neurotransmitter reception. This process includes tethering and docking steps that prepare vesicles for fusion.","definition_xrefs":["PMID:19503082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytosis","termid":"GO:0006887"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"part_of","term_name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"exocytic insertion of neurotransmitter receptor to postsynaptic membrane","termid":"GO:0098967"}


id: GO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma glycoprotein (obsolete GO:0005211)","synonyms":[{"name":"plasma glycoprotein","type":"exact"}],"termid":"GO:0005211"}


id: PBO:0028019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CAAX-protein_geranylgeranyltransferase_activity","termid":"PBO:0028019"}


id: PBO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.49","termid":"PBO:0003201"}


id: GO:1904012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to platinum.","definition_xrefs":["PMID:10089464","GOC:TermGenie","GO_REF:0000067"],"gene_count":0,"genotype_count":0,"name":"obsolete platinum binding (obsolete GO:1904012)","termid":"GO:1904012"}


id: PBO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 4","termid":"PBO:0070774"}


id: PATO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000144 solid substance (obsolete PATO:0000144)","termid":"PATO:0000144"}


id: PBO:0091879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER sterol deacetylase Say1","termid":"PBO:0091879"}


id: GO:0102169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyl-phenazine-1-carboxylate + 2 H+ + NADH + O2 = CO2 + H2O + NAD+ + pyocyanin. Also converts phenazine-1-carboxylate into 1-hydroxyphenazine.","definition_xrefs":["EC:1.14.13.218","PMID:11591691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-methylphenazine-1-carboxylate 1-monooxygenase (NADH) activity","synonyms":[{"name":"pyocyanin hydroxylase activity","type":"related"}],"termid":"GO:0102169"}


id: GO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a lung. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung growth","termid":"GO:0060437"}


id: PBO:0090746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Esf2","termid":"PBO:0090746"}


id: GO:0030565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activity that provides specificity to a pseudouridine synthetase by using base complementarity to guide site-specific pseudouridylations to a small nuclear RNA molecule.","definition_xrefs":["PMID:11733745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"},{"relation_name":"is_a","term_name":"snRNA modification guide activity","termid":"GO:0030566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"snRNA pseudouridylation guide activity","termid":"GO:0030565"}


id: PBO:0040437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 2","termid":"PBO:0040437"}


id: GO:0004019
data:
  {"annotated_genes":["SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85069],"is_not":false,"summary":null,"term":"GO:0004019"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + GTP + IMP = N(6)-(1,2-dicarboxyethyl)-AMP + GDP + 3 H+ + phosphate.","definition_xrefs":["RHEA:15753","EC:6.3.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"adenylosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ADENYLOSUCCINATE-SYNTHASE-RXN","Reactome:R-HSA-111524","KEGG_REACTION:R01135"],"synonyms":[{"name":"IMP--aspartate ligase activity","type":"related"},{"name":"IMP:L-aspartate ligase (GDP-forming)","type":"related"},{"name":"adenylosuccinate synthetase activity","type":"related"},{"name":"succino-AMP synthetase activity","type":"related"},{"name":"succinoadenylic kinosynthetase activity","type":"related"}],"termid":"GO:0004019","terms_by_termid":{"GO:0004019":null}}


id: GO:0051838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The killing by an organism of a cell in its symbiont organism by means of the rupture of cell membranes and the loss of cytoplasm. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing by host of symbiont cells","termid":"GO:0051873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis by host of symbiont cells","termid":"GO:0051838"}


id: GO:0060308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of GTP cyclohydrolase I. GTP cyclohydrolase I activity catalyzes the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"GTP cyclohydrolase I regulator activity","termid":"GO:0060308"}


id: PBO:0088208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Novel ORF identified by enrichment-based proteomics","termid":"PBO:0088208"}


id: PBO:0054021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1352","termid":"PBO:0054021"}


id: PBO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity Imt1","termid":"PBO:0090437"}


id: PR:Q9HDY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt71 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.10c","synonyms":[{"name":"Spom972h-ypt71","type":"exact"}],"termid":"PR:Q9HDY0"}


id: PBO:0004588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA","termid":"PBO:0004588"}


id: PBO:0083225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with the uncharacterized ORF YGR068C","termid":"PBO:0083225"}


id: FYPO:0000449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to centromere during vegetative growth","synonyms":[{"name":"abnormal protein localisation to centromere during vegetative growth","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"abnormal protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region during vegetative growth","type":"exact"}],"termid":"FYPO:0000449"}


id: PBO:0060300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 10","termid":"PBO:0060300"}


id: PBO:0041526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 87","termid":"PBO:0041526"}


id: PBO:0013018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl3","termid":"PBO:0013018"}


id: PBO:0029611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_tapered_cell","termid":"PBO:0029611"}


id: PBO:0089950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm4","termid":"PBO:0089950"}


id: PBO:0011520
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome type 2","termid":"PBO:0011520"}


id: GO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta-adrenergic receptors; the activity involves transmitting the signal to the Gs alpha subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","GOC:cb","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor activity","termid":"GO:0004935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta-adrenergic receptor activity","synonyms":[{"name":"beta adrenoceptor","type":"exact"}],"termid":"GO:0004939"}


id: PBO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 27","termid":"PBO:0072150"}


id: PBO:0031210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snowman-shaped_spore","termid":"PBO:0031210"}


id: SO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a propeptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propeptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:propeptide","type":"exact"},{"name":"propeptide region of CDS","type":"exact"}],"termid":"SO:0002250"}


id: GO:0018340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-serine to peptidyl-O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["RESID:AA0264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine biosynthetic process from peptidyl-serine","synonyms":[{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018340"}


id: GO:0008465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD+ = 3-hydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxypyruvate reductase [NAD(P)H] activity","termid":"GO:0016618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxypyruvate reductase (NADH) activity","secondary_identifiers":["MetaCyc:GLYCERATE-DEHYDROGENASE-RXN","RHEA:17905"],"synonyms":[{"name":"glycerate dehydrogenase (NAD+) activity","type":"exact"},{"name":"glycerate dehydrogenase activity","type":"broad"},{"name":"hydroxypyruvate dehydrogenase activity","type":"broad"}],"termid":"GO:0008465"}


id: PBO:0057897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-2","termid":"PBO:0057897"}


id: SO:0001369
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyluridine","secondary_identifiers":["RNAMOD:077"],"synonyms":[{"name":"5-carboxymethylaminomethyluridine","type":"exact"},{"name":"cmnm5U","type":"exact"},{"name":"five carboxymethylaminomethyluridine","type":"exact"}],"termid":"SO:0001369"}


id: PBO:0069187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 441, pseudogene","termid":"PBO:0069187"}


id: GO:0044098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of DNA by a cell, via the type IV secretion system.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by the type IV secretion system","termid":"GO:0044097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"DNA secretion by the type IV secretion system","synonyms":[{"name":"DNA secretion via the type IV secretion system","type":"exact"}],"termid":"GO:0044098"}


id: FYPO:0002843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"output_of","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleoplasm","synonyms":[{"name":"ectopic protein localization to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002843"}


id: PBO:0029693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_iron_level","termid":"PBO:0029693"}


id: PATO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000511 absolute disease sensitivity value (obsolete PATO:0000511)","termid":"PATO:0000511"}


id: PBO:0063883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class M","termid":"PBO:0063883"}


id: PBO:0028626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_shmoo_tip","termid":"PBO:0028626"}


id: GO:0035597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) at the C2 of the adenosine ring of N6-isopentenyladenosine (i6A) in tRNA, to form 2-methylthio-N6-isopentenyladenosine (ms2i6A).","definition_xrefs":["PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N6-isopentenyladenosine methylthiotransferase activity","synonyms":[{"name":"i6A methylthiotransferase activity","type":"exact"}],"termid":"GO:0035597"}


id: PBO:0051165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-48","termid":"PBO:0051165"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: PBO:0039084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agouti related neuropeptide","termid":"PBO:0039084"}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: PR:Q9UU78
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp103 gene.","definition_xrefs":["UniProtKB:Q9UU78","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.09c","synonyms":[{"name":"Spom972h-rpp103","type":"exact"}],"termid":"PR:Q9UU78"}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: PBO:0031581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate_on_glucose_carbon_source","termid":"PBO:0031581"}


id: GO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:tb","GOC:add","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"primitive erythrocyte differentiation","termid":"GO:0060319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primitive erythrocyte differentiation","synonyms":[{"name":"regulation of primitive RBC differentiation","type":"exact"},{"name":"regulation of primitive erythropoeisis","type":"exact"},{"name":"regulation of primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010725"}


id: PBO:0027743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_camptothecin","termid":"PBO:0027743"}


id: PBO:0036069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_polymerization","termid":"PBO:0036069"}


id: GO:0050762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide catabolic process","synonyms":[{"name":"depsipeptide breakdown","type":"exact"},{"name":"depsipeptide catabolism","type":"exact"},{"name":"depsipeptide degradation","type":"exact"}],"termid":"GO:0050762"}


id: PBO:0081677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 598, E3 ubiquitin ligase","termid":"PBO:0081677"}


id: PBO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0017549"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: GO:0033583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the rhabdomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"rhabdomere membrane","termid":"GO:0033583"}


id: GO:1905905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a nematode pharyngeal gland is generated and organized.","definition_xrefs":["PMID:21868609","GOC:TermGenie","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharyngeal gland morphogenesis","synonyms":[{"name":"glandulae pharyngeae morphogenesis","type":"related"},{"name":"pharynx gland morphogenesis","type":"exact"}],"termid":"GO:1905905"}


id: PBO:0078615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64F, pseudogene","termid":"PBO:0078615"}


id: PBO:0064242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D1","termid":"PBO:0064242"}


id: GO:0019928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an aspartic acid residue to form 3-(S-L-cysteinyl)-L-aspartic acid.","definition_xrefs":["RESID:AA0314","PDB:1JJU","PMID:11555656","PMID:11717396"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid (obsolete GO:0019928)","termid":"GO:0019928"}


id: PBO:0057038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR130A host gene","termid":"PBO:0057038"}


id: PBO:0000443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain","termid":"PBO:0000443"}


id: PBO:0053215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 12","termid":"PBO:0053215"}


id: PR:O94546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug150 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 150 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.07c","synonyms":[{"name":"Spom972h-mug150","type":"exact"}],"termid":"PR:O94546"}


id: GO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of secondary lysosome in which a primary lysosome has fused with the outer membrane of an autophagosome or amphisome. It is involved in the second step of autophagy in which it degrades contents with acidic lysosomal hydrolases.","definition_xrefs":["PMID:19008921","PMID:24657946","NIF_Subcellular:sao8444068431","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary lysosome","termid":"GO:0005767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"autolysosome","synonyms":[{"name":"AVd","type":"exact"},{"name":"degrading autophagic vacuole","type":"exact"}],"termid":"GO:0044754"}


id: PATO:0001462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a cell's plasma membrane by virtue of the electrical potential difference across it.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Membrane_potential"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric potential","termid":"PATO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane potential","termid":"PATO:0001462"}


id: MOD:00786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (2)H deuterium atoms for (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium substituted residue","synonyms":[{"name":"D(H)Res","type":"exact"}],"termid":"MOD:00786"}


id: PBO:0111340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated WD repeat protein Nan1/Utp17","termid":"PBO:0111340"}


id: PBO:0082698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mannan polymerase I; complex contains Van1p and Mnn9p and is involved in the first steps of mannan synthesis; mutants are vanadate-resistant","termid":"PBO:0082698"}


id: GO:0072742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SAGA complex is transported to, or maintained in, a specific location in the transcription regulatory region of a gene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"SAGA complex localization to transcription regulatory region","synonyms":[{"name":"SAGA complex localization to promoter","type":"exact"},{"name":"SAGA complex recruitment","type":"exact"}],"termid":"GO:0072742"}


id: PBO:0070977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 1","termid":"PBO:0070977"}


id: GO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it.","definition_xrefs":["ISBN:0781735149","GOC:jal","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction","termid":"GO:0002507"}


id: PBO:0078930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-2","termid":"PBO:0078930"}


id: PBO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously expressed prefoldin like chaperone","termid":"PBO:0080118"}


id: GO:0021769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the orbitofrontal cortex over time from its initial formation until its mature state. The orbitofrontal cortex is a cerebral cortex region located in the frontal lobe.","definition_xrefs":["GOC:dgh","ISBN:0878937420","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"orbitofrontal cortex development","termid":"GO:0021769"}


id: PBO:0052409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 3","termid":"PBO:0052409"}


id: PBO:0054884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2298","termid":"PBO:0054884"}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: GO:0072329
data:
  {"annotated_genes":["SJAG_02763","SJAG_03852","SJAG_00281","SJAG_00706","SJAG_00413","SJAG_03804","SJAG_04570","SJAG_01432","SJAG_00633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94327,107696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"},{"annotations":[107955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[87605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[97154,101195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[107890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[109886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_00413":null,"SJAG_00633":null,"SJAG_00706":null,"SJAG_01432":null,"SJAG_02763":null,"SJAG_03804":null,"SJAG_03852":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"monocarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072329","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0009062":null,"GO:0009436":null,"GO:0042758":null,"GO:0046177":null,"GO:1903457":null}}


id: GO:0010832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube differentiation","termid":"GO:0010832"}


id: GO:0032211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomerase","termid":"GO:0032210"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance via telomere lengthening","termid":"GO:1904357"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via telomerase","termid":"GO:0007004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via telomerase","synonyms":[{"name":"down regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"down-regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"downregulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"inhibition of telomere maintenance via telomerase","type":"narrow"}],"termid":"GO:0032211"}


id: PBO:0053670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 851","termid":"PBO:0053670"}


id: PBO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 46","termid":"PBO:0045856"}


id: GO:0097006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma lipoprotein particle levels","synonyms":[{"name":"plasma lipoprotein particle homeostasis","type":"narrow"}],"termid":"GO:0097006"}


id: GO:0070955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of killing of cells of another organism","termid":"GO:0051711"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated cytotoxicity","termid":"GO:0070954"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of symbiont cell","synonyms":[{"name":"down regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"downregulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"inhibition of neutrophil mediated killing of symbiont cell","type":"narrow"}],"termid":"GO:0070955"}


id: PBO:0078070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 60 (pseudogene)","termid":"PBO:0078070"}


id: GO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of F2-isoprostane.","definition_xrefs":["PMID:16371369","PMID:25449649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"F2-isoprostane catabolic process","termid":"GO:0062233"}


id: PBO:0043755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 3","termid":"PBO:0043755"}


id: PBO:0088400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOR signalling network scaffold, leucine-rich repeat protein Sog2","termid":"PBO:0088400"}


id: PBO:0053628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 673","termid":"PBO:0053628"}


id: PBO:0060960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor zeta","termid":"PBO:0060960"}


id: PBO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisA","termid":"PBO:0013076"}


id: PBO:0062381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 4","termid":"PBO:0062381"}


id: PBO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L11 (predicted)","termid":"PBO:0000323"}


id: GO:0044495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which one organism modulates the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:jl","PMID:19837656","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of biological quality in another organism","termid":"GO:0044553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of blood pressure in another organism","synonyms":[{"name":"modulation of blood pressure in other organism","type":"exact"},{"name":"regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044495"}


id: PR:O14466
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichol-phosphate mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01261","PANTHER:PTHR10859:SF37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.16c","secondary_identifiers":["UniProtKB:O14466"],"synonyms":[{"name":"DPM synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPD synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DPM1","type":"exact"},{"name":"dolichol-phosphate mannose synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphate beta-D-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mannose-P-dolichol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14466"}


id: PBO:0029106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_proline_level","termid":"PBO:0029106"}


id: PBO:0046928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member B","termid":"PBO:0046928"}


id: GO:0071859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide F receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neuropeptide F receptor binding","termid":"GO:0071859"}


id: GO:0015993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of molecular hydrogen (H2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete molecular hydrogen transport (obsolete GO:0015993)","termid":"GO:0015993"}


id: GO:1905806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse pruning.","definition_xrefs":["PMID:27779093","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"exact"},{"name":"regulation of synapse disassembly","type":"exact"},{"name":"regulation of synapse elimination","type":"exact"},{"name":"regulation of synapse removal","type":"exact"}],"termid":"GO:1905806"}


id: PBO:0067570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 725, pseudogene","termid":"PBO:0067570"}


id: GO:0050528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(acyloxy)acyl group of bacterial toxin = 3-hydroxyacyl group of bacterial toxin + a fatty acid.","definition_xrefs":["MetaCyc:3.1.1.77-RXN","EC:3.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"acyloxyacyl hydrolase activity","secondary_identifiers":["RHEA:12032"],"termid":"GO:0050528"}


id: GO:1903796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","PMID:11336802","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"negatively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inorganic anion transmembrane transport","synonyms":[{"name":"down regulation of inorganic anion membrane transport","type":"exact"},{"name":"down regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"down-regulation of inorganic anion membrane transport","type":"exact"},{"name":"down-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"downregulation of inorganic anion membrane transport","type":"exact"},{"name":"downregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane inorganic anion transport","type":"exact"},{"name":"inhibition of inorganic anion membrane transport","type":"narrow"},{"name":"inhibition of inorganic anion transmembrane transport","type":"narrow"},{"name":"inhibition of transmembrane inorganic anion transport","type":"narrow"},{"name":"negative regulation of inorganic anion membrane transport","type":"exact"},{"name":"negative regulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903796"}


id: GO:0000977
data:
  {"annotated_genes":["SJAG_02252","SJAG_01062","SJAG_02709","SJAG_00266","SJAG_00386","SJAG_05247","SJAG_02052","SJAG_00741","SJAG_06599","SJAG_03388","SJAG_02138","SJAG_04249","SJAG_02472","SJAG_03473","SJAG_04813","SJAG_01583","SJAG_02326","SJAG_03538","SJAG_00163","SJAG_02569","SJAG_04036","SJAG_02938","SJAG_04421","SJAG_04712","SJAG_00664","SJAG_03484","SJAG_01725","SJAG_05153","SJAG_02458","SJAG_05343","SJAG_01441","SJAG_03519","SJAG_01243","SJAG_02956","SJAG_02048","SJAG_05288","SJAG_01157","SJAG_00926","SJAG_00210","SJAG_03735","SJAG_00698","SJAG_00037","SJAG_02311","SJAG_00987","SJAG_01930","SJAG_01916","SJAG_01532","SJAG_02218","SJAG_04839","SJAG_01707","SJAG_03241","SJAG_00792","SJAG_04009","SJAG_02691","SJAG_00304","SJAG_04584","SJAG_04749","SJAG_04855","SJAG_01694","SJAG_00693","SJAG_04388","SJAG_06576","SJAG_03346","SJAG_02149","SJAG_03622","SJAG_05337","SJAG_04191","SJAG_05006","SJAG_03918","SJAG_02730","SJAG_02752","SJAG_01343","SJAG_00802","SJAG_01307","SJAG_03143","SJAG_03911","SJAG_00124","SJAG_02406","SJAG_03879","SJAG_00421","SJAG_00861","SJAG_04092","SJAG_00979","SJAG_01740","SJAG_03183","SJAG_02810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84981,88778,98360,111748,114024,114153],"is_not":false,"summary":null,"term":"GO:0000977"},{"annotations":[92429,102481,108008,77158,110956,96253,105311,93677,84155,108049,113588,93673,110701,84597,93524,96624,98824,92192,88059,89375,90887,114152,102366,109532,105312,103173,90214,97614,104759,83786,93676,105481,107008,102224,90870,86269,93674,105175,100894,100569,95632,104346,102845,88608,105820,107183,112732,114437,106854,109811,106992,108048,98175,93447,99688,85223,95933,101951,84226,103119,104101,89859,92721,107024,112594,112199,93206,98411,110210,84652,98359,100574,93074,88895,94259,103702,79318,89435,91845,85640,104931,94568,93675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[103174,104932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[85459,108009,90291,91731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[103703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":86,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00741":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01707":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02458":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02691":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001012"],"synonyms":[{"name":"RNA polymerase II regulatory region DNA binding","type":"related"}],"termid":"GO:0000977","terms_by_termid":{"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0001162":null,"GO:0044377":null}}


id: PBO:0065029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 5","termid":"PBO:0065029"}


id: GO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-CoA hydrolase activity (obsolete GO:0016290)","synonyms":[{"name":"fatty acyl thioesterase I","type":"related"},{"name":"long-chain fatty-acyl-CoA hydrolase activity","type":"broad"},{"name":"palmitoyl coenzyme A hydrolase activity","type":"related"},{"name":"palmitoyl thioesterase activity","type":"related"},{"name":"palmitoyl-CoA deacylase activity","type":"related"},{"name":"palmityl thioesterase I","type":"related"},{"name":"palmityl thioesterase activity","type":"related"},{"name":"palmityl-CoA deacylase activity","type":"related"}],"termid":"GO:0016290"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: MOD:00910
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-isoleucine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-isoleucine residue","synonyms":[{"name":"ModIle","type":"exact"}],"termid":"MOD:00910"}


id: PBO:0002741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp14","termid":"PBO:0002741"}


id: PBO:0040483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3 like","termid":"PBO:0040483"}


id: GO:0000972
data:
  {"annotated_genes":["SJAG_02757","SJAG_03986","SJAG_04379","SJAG_00298","SJAG_01374","SJAG_04148","SJAG_03299","SJAG_04347"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87114,96545,100073,109373],"is_not":false,"summary":null,"term":"GO:0000972"},{"annotations":[98092,68865,106551,85190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000973"}]},"cv_name":"biological_process","definition":"The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery. In S. cerevisiae, this process involves cis-acting DNA sequences such as the TATA box and upstream activating sequence (UAS) elements, trans-acting transcriptional activators, and also the 3'-UTR of the transcript.","definition_xrefs":["PMID:18614049","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_01374":null,"SJAG_02757":null,"SJAG_03299":null,"SJAG_03986":null,"SJAG_04148":null,"SJAG_04347":null,"SJAG_04379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000972","terms_by_termid":{"GO:0000972":null,"GO:0000973":null}}


id: PBO:0044494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 2","termid":"PBO:0044494"}


id: PBO:0088425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP binding superfamily, implicated in heme catabolism","termid":"PBO:0088425"}


id: GO:1904117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vasopressin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22811487","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to vasopressin","termid":"GO:1904116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vasopressin","termid":"GO:1904117"}


id: GO:0099545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}


id: PBO:0011484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc1","termid":"PBO:0011484"}


id: GO:0009980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of C-terminal glutamate residues from a wide range of N-acylating groups, including peptidyl, aminoacyl, benzoyl, benzyloxycarbonyl, folyl and pteroyl groups.","definition_xrefs":["EC:3.4.17.11","MetaCyc:3.4.17.11-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate carboxypeptidase activity (obsolete GO:0009980)","synonyms":[{"name":"N-pteroyl-L-glutamate hydrolase activity","type":"related"},{"name":"carboxypeptidase G activity","type":"broad"},{"name":"carboxypeptidase G1 activity","type":"related"},{"name":"carboxypeptidase G2 activity","type":"related"},{"name":"glutamate carboxypeptidase activity","type":"exact"},{"name":"glutamyl carboxypeptidase activity","type":"related"}],"termid":"GO:0009980"}


id: GO:0090425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell differentiation","termid":"GO:0090425"}


id: PATO:0001453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An attachment quality inhering in a bearer by virtue of the bearer's lacking connection or association with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment quality","termid":"PATO:0001435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"detached from","synonyms":[{"name":"detached","type":"exact"}],"termid":"PATO:0001453"}


id: PBO:0059898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 21","termid":"PBO:0059898"}


id: GO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"negatively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pteridine metabolic process","synonyms":[{"name":"down regulation of pteridine metabolic process","type":"exact"},{"name":"down-regulation of pteridine metabolic process","type":"exact"},{"name":"downregulation of pteridine metabolic process","type":"exact"},{"name":"inhibition of pteridine metabolic process","type":"narrow"},{"name":"negative regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0045863"}


id: PBO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt3","termid":"PBO:0001420"}


id: SO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a vault RNA.","definition_xrefs":["PMID:19298825","PMID:19491402","PMID:22058117","PMID:22926522","PMID:30773316","PMID:9535882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA_gene","termid":"SO:0002358"}


id: PBO:0052382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF23 and PAQR5 antisense RNA 1","termid":"PBO:0052382"}


id: GO:0050378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate = UDP-alpha-D-galacturonate.","definition_xrefs":["RHEA:11404","EC:5.1.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"UDP-glucuronate 4-epimerase activity","secondary_identifiers":["KEGG_REACTION:R01385","MetaCyc:PWY-4861","MetaCyc:UDP-GLUCURONATE-4-EPIMERASE-RXN"],"synonyms":[{"name":"UDP glucuronic epimerase activity","type":"related"},{"name":"UDP-D-galacturonic acid 4-epimerase activity","type":"related"},{"name":"UDP-galacturonate 4-epimerase activity","type":"related"},{"name":"UDPglucuronate 4-epimerase activity","type":"related"},{"name":"uridine diphospho-D-galacturonic acid","type":"related"},{"name":"uridine diphosphoglucuronate epimerase activity","type":"related"},{"name":"uridine diphosphoglucuronic epimerase activity","type":"related"}],"termid":"GO:0050378"}


id: GO:2001206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of osteoclast differentiation","termid":"GO:0045672"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"positively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast development","synonyms":[{"name":"positive regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001206"}


id: GO:0034694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin","synonyms":[{"name":"response to prostaglandin stimulus","type":"exact"}],"termid":"GO:0034694"}


id: PBO:0069556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 828, pseudogene","termid":"PBO:0069556"}


id: PBO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecto-NOX disulfide-thiol exchanger 2","termid":"PBO:0046333"}


id: PBO:0036041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036041"}


id: PBO:0049748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HBS1 like translational GTPase","termid":"PBO:0049748"}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: GO:0072683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","GOC:mah","CL:0000084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell extravasation","synonyms":[{"name":"T lymphocyte extravasation","type":"exact"},{"name":"T-cell extravasation","type":"exact"},{"name":"T-lymphocyte extravasation","type":"exact"}],"termid":"GO:0072683"}


id: PBO:0031597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_metaphase","termid":"PBO:0031597"}


id: PBO:0041017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 4, pseudogene","termid":"PBO:0041017"}


id: PBO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-2 (pseudogene)","termid":"PBO:0051318"}


id: PBO:0068916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 159, pseudogene","termid":"PBO:0068916"}


id: GO:0061360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the progression of the optic chiasm from its initial formation to the mature structure. The process begins when the pathfinding of the axons of the developing optic nerve cause some axons to cross at the midline of the brain and ends when the axons are mature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic chiasma development","synonyms":[{"name":"optic chiasm development","type":"exact"}],"termid":"GO:0061360"}


id: PBO:0080429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 13","termid":"PBO:0080429"}


id: PBO:0087821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (48 kDa); involved in RNA polymerase II transcription initiation; potential Cdc28p substrate","termid":"PBO:0087821"}


id: PATO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's being between the onset of puberty and maturity.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adolescent","termid":"PATO:0001189"}


id: GO:0097749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane organization process resulting in the formation of a tubular projection. This may face inwardly (as in tubular membrane invaginations) or outwardly (as in endosomal tubules).","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane tubulation","termid":"GO:0097749"}


id: GO:0071678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a neuron in the olfactory bulb is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb axon guidance","synonyms":[{"name":"olfactory bulb axon pathfinding","type":"exact"}],"termid":"GO:0071678"}


id: PBO:0053614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 652","termid":"PBO:0053614"}


id: PBO:0068886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 127, pseudogene","termid":"PBO:0068886"}


id: PBO:0048715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 1","termid":"PBO:0048715"}


id: PBO:0089360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane PTR family peptide transmembrane transporter Ptr2","termid":"PBO:0089360"}


id: PBO:0067038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 52, pseudogene","termid":"PBO:0067038"}


id: PBO:0005238
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of staurosporine","termid":"PBO:0005238"}


id: GO:2000526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of glycoprotein biosynthetic process that is involved in immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"part_of","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation","synonyms":[{"name":"positive regulation of glycoprotein biosynthetic process of formation of immunological synapse","type":"exact"},{"name":"positive regulation of glycoprotein biosynthetic process of immunological synapse formation","type":"exact"}],"termid":"GO:2000526"}


id: GO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tooth development process in which the teeth enter the mouth and become visible.","definition_xrefs":["Wikipedia:Tooth_eruption"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth eruption","termid":"GO:0044691"}


id: PBO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 40 (pseudogene)","termid":"PBO:0045628"}


id: PBO:0077872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 3","termid":"PBO:0077872"}


id: PBO:0061228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing octamer binding","termid":"PBO:0061228"}


id: PBO:0043087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic gamma subunit","termid":"PBO:0043087"}


id: FYPO:0000524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of peroxisomal transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal peroxisomal transport","termid":"FYPO:0000522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased peroxisomal transport","synonyms":[{"name":"decreased peroxisomal transport during mitotic cell cycle","type":"related"},{"name":"decreased peroxisomal transport during vegetative growth","type":"exact"},{"name":"peroxisomal transport: decreased","type":"related"},{"name":"reduced peroxisomal transport","type":"exact"}],"termid":"FYPO:0000524"}


id: PBO:0031726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_recombination","termid":"PBO:0031726"}


id: PBO:0029723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_nocodazole","termid":"PBO:0029723"}


id: PBO:0091539
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TPM1 smooth muscle isoform","termid":"PBO:0091539"}


id: PBO:0042081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC148 antisense RNA 1","termid":"PBO:0042081"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: GO:0007087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which nuclear pore complexes reform during mitotic cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore complex assembly","termid":"GO:0051292"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007049","GO:0065003","GO:0008150","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"mitotic nuclear pore complex reassembly","termid":"GO:0007087"}


id: PBO:0066359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REST corepressor 3","termid":"PBO:0066359"}


id: PBO:0084771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial nuclease functioning in DNA repair and replication; modulates the stability of the mitochondrial genome, induced by exposure to mutagens, also induced during meiosis at a time nearly coincident with commitment to recombination; DIN7 has a paralog, EXO1, that arose from the whole genome duplication","termid":"PBO:0084771"}


id: GO:1903593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of histamine secretion by mast cell.","definition_xrefs":["GOC:als","PMID:18253931","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"histamine secretion by mast cell","termid":"GO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of histamine secretion by mast cell","termid":"GO:1903593"}


id: PBO:0043166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class II major histocompatibility complex transactivator","termid":"PBO:0043166"}


id: PBO:0090695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp14","termid":"PBO:0090695"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: PBO:0078633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIO and F-actin binding protein","termid":"PBO:0078633"}


id: PBO:0062531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily X member 1 pseudogene","termid":"PBO:0062531"}


id: PBO:0058426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4796","termid":"PBO:0058426"}


id: PBO:0031107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damaging_agents","termid":"PBO:0031107"}


id: GO:0052879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate = (7S,8S,9Z,12Z)-7,8-dihydroxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"9,12-octadecadienoate 8-hydroperoxide 8S-isomerase activity","secondary_identifiers":["EC:5.4.4.6","KEGG_REACTION:R07062","MetaCyc:RXN-12758"],"synonyms":[{"name":"(8R,9Z,12Z)-8-hydroperoxy-9,12-octadecadienoate mutase ((7S,8S,9Z,12Z)-5,8-dihydroxy-9,12-octadecadienoate-forming) activity","type":"related"},{"name":"8-hydroperoxide isomerase activity","type":"broad"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052879"}


id: PATO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering ina bearer by virtue of the bearer's unequal distribution of fine motor skill between its left and right hands or feet.","definition_xrefs":["birnlex:2178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"handedness","termid":"PATO:0002201"}


id: GO:0010772
data:
  {"annotated_genes":["SJAG_03221","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103787,106425],"is_not":false,"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006259","GO:0044085","GO:0007049","GO:0065003","GO:0008150","GO:0006281","GO:0006310","GO:0140013"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010772","terms_by_termid":{"GO:0010772":null}}


id: PBO:0039192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 2","termid":"PBO:0039192"}


id: PBO:0071765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 12","termid":"PBO:0071765"}


id: SO:1000092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any sequence variant effect that is known at nucleotide level but cannot be explained by using other key terms.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000092 sequence_variant_causing_complex_change_of_translational_product (obsolete SO:1000092)","synonyms":[{"name":"mutation causing complex change of translational product","type":"related"},{"name":"sequence variant causing complex change of translational product","type":"exact"}],"termid":"SO:1000092"}


id: PBO:0071788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p21","termid":"PBO:0071788"}


id: PR:O59827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disulfide-bond oxidoreductase YfcG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.07c","secondary_identifiers":["UniProtKB:O59827"],"synonyms":[{"name":"GST-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yfcG","type":"exact"}],"termid":"PR:O59827"}


id: GO:0010954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of protein maturation by peptide bond cleavage.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"positively_regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of protein processing","synonyms":[{"name":"positive regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0010954"}


id: PBO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 3","termid":"PBO:0052711"}


id: PBO:0089822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Spc24","termid":"PBO:0089822"}


id: PBO:0061393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin/nucleoplasmin 2","termid":"PBO:0061393"}


id: PBO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 4","termid":"PBO:0046023"}


id: PATO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000255 taste_acuity (obsolete PATO:0000255)","termid":"PATO:0000255"}


id: _global:finished_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Xy is finished_by Y if Y part of X, and X and Y share a 3' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_by","termid":"_global:finished_by"}


id: GO:0033927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltohexaose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltohexaosidase activity","secondary_identifiers":["MetaCyc:3.2.1.98-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltohexaohydrolase activity","type":"related"},{"name":"G6-amylase activity","type":"related"},{"name":"exo-maltohexaohydrolase activity","type":"related"},{"name":"maltohexaose-producing amylase activity","type":"related"}],"termid":"GO:0033927"}


id: PBO:0077276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14D, pseudogene","termid":"PBO:0077276"}


id: PBO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 1","termid":"PBO:0072668"}


id: PBO:0044358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 45","termid":"PBO:0044358"}


id: PBO:0036354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18c","termid":"PBO:0036354"}


id: GO:1901095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein homooligomerization","termid":"GO:0032464"},{"relation_name":"is_a","term_name":"positive regulation of protein tetramerization","termid":"GO:1901092"},{"relation_name":"is_a","term_name":"regulation of protein homotetramerization","termid":"GO:1901093"},{"relation_name":"positively_regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of protein homotetramerization","synonyms":[{"name":"activation of protein homotetramer assembly","type":"narrow"},{"name":"activation of protein homotetramer biosynthesis","type":"narrow"},{"name":"activation of protein homotetramer biosynthetic process","type":"narrow"},{"name":"activation of protein homotetramer formation","type":"narrow"},{"name":"activation of protein homotetramerization","type":"narrow"},{"name":"positive regulation of protein homotetramer assembly","type":"exact"},{"name":"positive regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"positive regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"positive regulation of protein homotetramer formation","type":"exact"},{"name":"up regulation of protein homotetramer assembly","type":"exact"},{"name":"up regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"up regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"up regulation of protein homotetramer formation","type":"exact"},{"name":"up regulation of protein homotetramerization","type":"exact"},{"name":"up-regulation of protein homotetramer assembly","type":"exact"},{"name":"up-regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"up-regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"up-regulation of protein homotetramer formation","type":"exact"},{"name":"up-regulation of protein homotetramerization","type":"exact"},{"name":"upregulation of protein homotetramer assembly","type":"exact"},{"name":"upregulation of protein homotetramer biosynthesis","type":"exact"},{"name":"upregulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"upregulation of protein homotetramer formation","type":"exact"},{"name":"upregulation of protein homotetramerization","type":"exact"}],"termid":"GO:1901095"}


id: GO:0006721
data:
  {"annotated_genes":["SJAG_03352","SJAG_04865","SJAG_00624","SJAG_00580","SJAG_04307","SJAG_00413","SJAG_01474","SJAG_04499","SJAG_03360","SJAG_03715","SJAG_04568","SJAG_03349","SJAG_02719"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105606,102642,95723,107426,109871,84890,90589,92733,94186,111022,98004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[95724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033384"},{"annotations":[105607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[84922,65752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure and including derivatives with various functional groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_01474":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03360":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"terpenoid metabolism","type":"exact"}],"termid":"GO:0006721","terms_by_termid":{"GO:0010142":null,"GO:0016104":null,"GO:0033384":null,"GO:0033386":null}}


id: GO:0010774
data:
  {"annotated_genes":["SJAG_02267","SJAG_03751","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84676,89015,96672],"is_not":false,"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic strand invasion involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010774","terms_by_termid":{"GO:0010774":null}}


id: PBO:0062732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 6","termid":"PBO:0062732"}


id: PBO:0086504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein; in the Sigma 1278B strain background YLL053C is contiguous with AQY2 which encodes an aquaporin","termid":"PBO:0086504"}


id: PBO:0065735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxidasin","termid":"PBO:0065735"}


id: PBO:0081858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF790 antisense RNA 1","termid":"PBO:0081858"}


id: GO:0097746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel diameter maintenance","secondary_identifiers":["GO:0050880","GO:0042312"],"synonyms":[{"name":"blood vessel diameter homeostasis","type":"exact"},{"name":"regulation of blood vessel diameter","type":"exact"},{"name":"regulation of blood vessel size","type":"related"},{"name":"regulation of vasodilatation","type":"related"},{"name":"regulation of vasodilation","type":"related"}],"termid":"GO:0097746"}


id: GO:0140007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates the TORC1 signaling pathway in response to nutrients. The KICSTOR complex is composed of KPTN, ITFG2, C12orf66 and SZT2.","definition_xrefs":["PMID:28199306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"KICSTOR complex","termid":"GO:0140007"}


id: GO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 7 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 7 receptor binding","type":"exact"},{"name":"type 7 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031833"}


id: PBO:0085357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheine:protein transferase (PPTase); activates mitochondrial acyl carrier protein (Acp1p) by phosphopantetheinylation","termid":"PBO:0085357"}


id: PBO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitophagy receptor Atg43","termid":"PBO:0090144"}


id: PBO:0041226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 35","termid":"PBO:0041226"}


id: FYPO:0000123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"large vacuoles","termid":"FYPO:0007821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"large vacuoles during vegetative growth","synonyms":[{"name":"enlarged vacuoles during vegetative growth","type":"exact"},{"name":"large vacuoles during mitotic cell cycle","type":"related"},{"name":"vacuole organization defects, large vacuoles","type":"exact"}],"termid":"FYPO:0000123"}


id: FYPO:0008189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister kinetochores become separated during the first meiotic nuclear division, and sister chromatids subsequently separate to result in equational segregation, only visible in the absence of chiasmata. Equational sister chromatid separation is caused by bi-orientated attachment of sister chromatids.","direct_ancestors":[{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I with  equational sister chromatid  segregation in meiosis I","termid":"FYPO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"equational sister chromatid segregation during achiasmatic meiosis I","termid":"FYPO:0008189"}


id: GO:0052749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose 6-phosphate + coenzyme F420 + H+ = 6-O-phosphono-D-glucono-1,5-lactone + reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","EC:1.1.98.2","RHEA:27294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glucose-6-phosphate dehydrogenase (coenzyme F420) activity","secondary_identifiers":["MetaCyc:RXN-11283","KEGG_REACTION:R09550"],"synonyms":[{"name":"D-glucose-6-phosphate:F420 1-oxidoreductase activity","type":"exact"},{"name":"F420-dependent glucose-6-phosphate dehydrogenase activity","type":"related"},{"name":"coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0052749"}


id: PBO:0073570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 3","termid":"PBO:0073570"}


id: PBO:0074170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 1","termid":"PBO:0074170"}


id: PBO:0003306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome homolog binding protein Lsb1 (predicted)","termid":"PBO:0003306"}


id: GO:2000133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of octopamine or tyramine signaling pathway","termid":"GO:2000127"},{"relation_name":"is_a","term_name":"regulation of tyramine signaling pathway","termid":"GO:2000131"},{"relation_name":"positively_regulates","term_name":"tyramine signaling pathway","termid":"GO:0071928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tyramine signaling pathway","synonyms":[{"name":"positive regulation of tyramine signalling pathway","type":"exact"}],"termid":"GO:2000133"}


id: GO:0019788
data:
  {"annotated_genes":["SJAG_01018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 from one protein to another via the reaction X-NEDD8 + Y = Y-NEDD8 + X, where both X-NEDD8 and Y-NEDD8 are covalent linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016740","GO:0019787","GO:0016746"],"is_obsolete":false,"name":"NEDD8 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8951764","Reactome:R-HSA-8952044","Reactome:R-HSA-8952626","Reactome:R-HSA-8952638","GO:0042295","GO:0016976","GO:0019945","Reactome:R-HSA-8951661","Reactome:R-HSA-8951648","Reactome:R-HSA-8952618","Reactome:R-HSA-8956025","Reactome:R-HSA-8952631"],"synonyms":[{"name":"Hub1 conjugating enzyme activity","type":"related"},{"name":"NEDD8 conjugating enzyme activity","type":"related"},{"name":"RUB1 conjugating enzyme activity","type":"related"}],"termid":"GO:0019788","terms_by_termid":{"GO:0061654":null}}


id: PBO:0017650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunit Seh1","termid":"PBO:0017650"}


id: GO:0000103
data:
  {"annotated_genes":["SJAG_01786","SJAG_01702","SJAG_00084","SJAG_03475","SJAG_04060","SJAG_05027","SJAG_01192","SJAG_04953","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83962,86191,93942,103634,111547,111654,113577],"is_not":false,"summary":null,"term":"GO:0000103"},{"annotations":[103635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010134"},{"annotations":[103636,84960,96128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019379"}]},"cv_name":"biological_process","definition":"The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_01192":null,"SJAG_01693":null,"SJAG_01702":null,"SJAG_01786":null,"SJAG_03475":null,"SJAG_04060":null,"SJAG_04953":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfate assimilation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019378"],"synonyms":[{"name":"sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"sulphate assimilation","type":"exact"},{"name":"sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:0000103","terms_by_termid":{"GO:0000103":null,"GO:0010134":null,"GO:0019379":null}}


id: PBO:0056450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 2","termid":"PBO:0056450"}


id: PBO:0071024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 26","termid":"PBO:0071024"}


id: GO:0052444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont salicylic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway (obsolete GO:0052444)","synonyms":[{"name":"modulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"modulation of defense-related symbiont SA-mediated signal transduction pathway by organism","type":"exact"}],"termid":"GO:0052444"}


id: PBO:0028349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_M_phase","termid":"PBO:0028349"}


id: GO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lysine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity lysine transmembrane transporter activity","synonyms":[{"name":"high affinity lysine transmembrane transporter activity","type":"exact"},{"name":"high affinity lysine transporter activity","type":"broad"}],"termid":"GO:0005292"}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.18.2-RXN","RHEA:16145"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: PBO:0024845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UreF","termid":"PBO:0024845"}


id: PBO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed from ncRNA to protein 20151128","termid":"PBO:0025457"}


id: PBO:0056667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 5","termid":"PBO:0056667"}


id: PBO:0076732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 1","termid":"PBO:0076732"}


id: GO:0046015
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102362,71049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"Any process involving glucose that modulates the frequency, rate or extent or transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription by glucose","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046015","terms_by_termid":{"GO:0000433":null}}


id: GO:0009871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by ethylene (ethene) involved in jasmonic acid/ethylene dependent systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway (jasmonic acid/ethene-dependent systemic resistance)","type":"exact"},{"name":"ethylene mediated signaling pathway (jasmonic acid/ethylene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid and ethene-dependent systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, ethene mediated signalling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, ethylene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0009871"}


id: PBO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase","termid":"PBO:0000729"}


id: GO:0048753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment granule organization","synonyms":[{"name":"pigment granule organisation","type":"exact"},{"name":"pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0048753"}


id: PBO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.47","termid":"PBO:0000984"}


id: PBO:0085436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; ribosome-bound Pub1p modulates stop codon decoding during translation termination","termid":"PBO:0085436"}


id: SO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed, resulting in a premature stop codon, leading to a shortened polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","loinc:LA6699-8","http://vat.gersteinlab.org/formats.php","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://ensembl.org/info/genome/variation/prediction/predicted_data.html"],"synonyms":[{"name":"ANNOVAR:stopgain","type":"exact"},{"name":"Jannovar:stop_gained","type":"exact"},{"name":"Seattleseq:stop-gained","type":"exact"},{"name":"Seattleseq:stop-gained-near-splice","type":"related"},{"name":"VAAST:stop_gained","type":"exact"},{"name":"VAT:prematureStop","type":"exact"},{"name":"VEP:stop_gained","type":"exact"},{"name":"nonsense","type":"exact"},{"name":"nonsense codon","type":"exact"},{"name":"snpEff:STOP_GAINED","type":"exact"},{"name":"stop codon gained","type":"related"},{"name":"stop gained","type":"exact"}],"termid":"SO:0001587"}


id: PBO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 71","termid":"PBO:0071069"}


id: GO:1904240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","PMID:17000876","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"negatively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904240"}


id: PBO:0029206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hygromycin_B","termid":"PBO:0029206"}


id: PBO:0053306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28A pseudogene 3","termid":"PBO:0053306"}


id: GO:0141000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 4 at the lysine-91 residue.","definition_xrefs":["PMID:19818714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 ubiquitin ligase activity","termid":"GO:0141056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0019787","GO:0003824","GO:0004842","GO:0016740","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"histone H4K91 ubiquitin ligase activity","synonyms":[{"name":"histone H4-K91 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H4-K91 specific)","type":"exact"}],"termid":"GO:0141000"}


id: PBO:0063293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 7","termid":"PBO:0063293"}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: PBO:0087300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin, histone H3 deacetylase; involved along with Hst4p in telomeric silencing, cell cycle progression, radiation resistance, genomic stability and short-chain fatty acid metabolism; member of the Sir2 family of NAD(+)-dependent protein deacetylases","termid":"PBO:0087300"}


id: PBO:0076210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 20","termid":"PBO:0076210"}


id: GO:0006205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine metabolic process (obsolete GO:0006205)","synonyms":[{"name":"pyrimidine metabolic process","type":"exact"}],"termid":"GO:0006205"}


id: PBO:0066360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCSD domain containing 1","termid":"PBO:0066360"}


id: FYPO:0003996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA primase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000293","FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA primase activity","synonyms":[{"name":"DNA primase activity abolished","type":"exact"}],"termid":"FYPO:0003996"}


id: GO:0051011
data:
  {"annotated_genes":["SJAG_03835","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70215,70775],"is_not":false,"summary":null,"term":"GO:0051011"}]},"cv_name":"molecular_function","definition":"Binding to the minus end of a microtubule.","definition_xrefs":["GOC:ai","PMID:14557818","PMID:14614826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02609":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005488","GO:0008017","GO:0005515"],"is_obsolete":false,"name":"microtubule minus-end binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051011","terms_by_termid":{"GO:0051011":null}}


id: PBO:0082342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, also known as pontin; member of the AAA+ and RuvB-like protein families; similar to Rvb2p; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, and the R2TP complex (Rvb1-Rvb2-Tah1-Pih1); involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly","termid":"PBO:0082342"}


id: GO:0030573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid metabolic process","termid":"GO:0008206"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"bile acid catabolic process","secondary_identifiers":["GO:0019613"],"synonyms":[{"name":"bile acid 7alpha-dehydroxylation pathway","type":"narrow"},{"name":"bile acid breakdown","type":"exact"},{"name":"bile acid catabolism","type":"exact"},{"name":"bile acid degradation","type":"exact"},{"name":"cholate catabolic process","type":"narrow"}],"termid":"GO:0030573"}


id: GO:0033931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-galactosaminidic linkages in poly(D-galactosamine).","definition_xrefs":["EC:3.2.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"endogalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.109-RXN"],"synonyms":[{"name":"galactosaminoglycan glycanohydrolase activity","type":"related"}],"termid":"GO:0033931"}


id: PBO:0080711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 11","termid":"PBO:0080711"}


id: PBO:0035961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0035961"}


id: PBO:0040629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 associated nuclear protein","termid":"PBO:0040629"}


id: GO:0050071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + L-lysyl-tRNA(Lys) = 1,2-diacyl-sn-glycero-3-phospho-1'-(3'-O-L-lysyl)-sn-glycerol + tRNA(Lys).","definition_xrefs":["EC:2.3.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylglycerol lysyltransferase activity","secondary_identifiers":["MetaCyc:LYSYLTRANSFERASE-RXN","RHEA:10668"],"synonyms":[{"name":"lysylphosphatidylglycerol synthase activity","type":"exact"},{"name":"lysyltransferase activity","type":"broad"}],"termid":"GO:0050071"}


id: GO:0016963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interaction with the alpha-2 macroglobulin receptor and glycoprotein gp330 forming a complex with the alpha-2 macroglobulin receptor light and heavy chains.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-2 macroglobulin receptor-associated protein activity (obsolete GO:0016963)","synonyms":[{"name":"alpha-2 macroglobulin receptor-associated protein activity","type":"exact"}],"termid":"GO:0016963"}


id: PBO:0054806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2219","termid":"PBO:0054806"}


id: FYPO:0001270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the separation of chromosomes into two distinct unequal masses, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PMID:22711988","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0000641"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"complete but unequal mitotic chromosome segregation","type":"exact"},{"name":"complete but unequal mitotic sister chromatid separation","type":"related"},{"name":"complete but unequal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"complete but unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001270"}


id: GO:0018612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dibenzothiophene + NADH + O2 + H+ = NAD+ + cis-1,2-dihydroxy-1,2-dihydrodibenzothiophene.","definition_xrefs":["UM-BBD_reactionID:r0160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dibenzothiophene dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018612"}


id: GO:0039555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of MDA-5 (also known as IFIH1) by binding to MDA-5 itself. For example, direct binding of viral proteins to the host MDA-5 protein can inhibit interaction of MDA-5 with MAVS, its downstream signaling effector.","definition_xrefs":["PMID:19019954","VZ:603"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host MDA-5 activity via MDA-5 binding (obsolete GO:0039555)","synonyms":[{"name":"suppression by virus of host MDA5 activity by MDA-5 binding","type":"exact"}],"termid":"GO:0039555"}


id: PBO:0088335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22","termid":"PBO:0088335"}


id: PBO:0029859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell_population_(obsolete_FYPO:0002378)","termid":"PBO:0029859"}


id: PBO:0073344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 6","termid":"PBO:0073344"}


id: PBO:0081438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 287","termid":"PBO:0081438"}


id: PBO:0055332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2760","termid":"PBO:0055332"}


id: PBO:0077362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 102","termid":"PBO:0077362"}


id: GO:0090482
data:
  {"annotated_genes":["SJAG_02780","SJAG_00835","SJAG_04673","SJAG_02779","SJAG_02962","SJAG_03652","SJAG_05175","SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70832,88206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[103686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[96805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[104409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[99772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[86324,86323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a vitamin from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"vitamin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051183"],"synonyms":[{"name":"vitamin or cofactor transporter activity","type":"broad"},{"name":"vitamin transporter activity","type":"related"}],"termid":"GO:0090482","terms_by_termid":{"GO:0008517":null,"GO:0015225":null,"GO:0015233":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: GO:0042365
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl","PMID:24365359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"vitamin catabolic process","termid":"GO:0009111"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"water-soluble vitamin catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"water-soluble vitamin breakdown","type":"exact"},{"name":"water-soluble vitamin catabolism","type":"exact"},{"name":"water-soluble vitamin degradation","type":"exact"}],"termid":"GO:0042365","terms_by_termid":{"GO:0042820":null}}


id: GO:1904576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tunicamycin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23106379"],"gene_count":0,"genotype_count":0,"name":"obsolete response to tunicamycin (obsolete GO:1904576)","termid":"GO:1904576"}


id: PBO:0077303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 42","termid":"PBO:0077303"}


id: PBO:0003431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase Coq6 (predicted)","termid":"PBO:0003431"}


id: GO:0060952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac glial cell over time, from its formation to the fully functional mature cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell development","termid":"GO:0060952"}


id: PBO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 1","termid":"PBO:0072272"}


id: PBO:0074394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 3","termid":"PBO:0074394"}


id: GO:0005673
data:
  {"annotated_genes":["SJAG_00116","SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93755,111189],"is_not":false,"summary":null,"term":"GO:0005673"}]},"cv_name":"cellular_component","definition":"A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH.","definition_xrefs":["GOC:jl","PMID:16547462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00116":null,"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"transcription factor TFIIE complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005673","terms_by_termid":{"GO:0005673":null}}


id: PBO:0088809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec72","termid":"PBO:0088809"}


id: PBO:0055824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 2","termid":"PBO:0055824"}


id: GO:0060361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air, usually by means of active wing movement.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight","termid":"GO:0060361"}


id: GO:0070137
data:
  {"annotated_genes":["SJAG_02214","SJAG_16454"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86440,102242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0008233","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ubiquitin-like protein-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small conjugating protein-specific endopeptidase activity","type":"exact"}],"termid":"GO:0070137","terms_by_termid":{"GO:0070139":null}}


id: GO:0090697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the post-embryonic phase, of a plant tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"post-embryonic plant organ development","termid":"GO:0090696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"}


id: PBO:0083712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting; SPT23 has a paralog, MGA2, that arose from the whole genome duplication","termid":"PBO:0083712"}


id: PBO:0073330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 6","termid":"PBO:0073330"}


id: PBO:0089739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS complex subunit Vac7","termid":"PBO:0089739"}


id: PBO:0053144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6F, pseudogene","termid":"PBO:0053144"}


id: PBO:0024474
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HRR25","termid":"PBO:0024474"}


id: GO:0046623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of a sphingolipid from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:ai","PMID:12034738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transporter activity","termid":"GO:0046624"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sphingolipid floppase activity","synonyms":[{"name":"sphingolipid flippase activity","type":"exact"},{"name":"sphingolipid floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"sphingolipid-translocating ATPase activity","type":"related"}],"termid":"GO:0046623"}


id: PBO:0068428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 3","termid":"PBO:0068428"}


id: FYPO:0005011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H4 acetylation during vegetative growth","termid":"FYPO:0002364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H4 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H4 acetylation during mitotic cell cycle","type":"related"},{"name":"reduced histone H4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005011"}


id: PBO:0108945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 2","termid":"PBO:0108945"}


id: PBO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping enzyme, scavenger","termid":"PBO:0044641"}


id: GO:0009597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a virus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of virus","synonyms":[{"name":"perception of virus","type":"related"}],"termid":"GO:0009597"}


id: GO:0032104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a response to an extracellular stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of response to extracellular stimulus (obsolete GO:0032104)","termid":"GO:0032104"}


id: GO:2001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin A4 metabolic process","termid":"GO:2001302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipoxin A4 biosynthetic process","synonyms":[{"name":"LXA4 anabolism","type":"exact"},{"name":"LXA4 biosynthesis","type":"exact"},{"name":"LXA4 biosynthetic process","type":"exact"},{"name":"LXA4 formation","type":"exact"},{"name":"LXA4 synthesis","type":"exact"},{"name":"lipoxin A4 anabolism","type":"exact"},{"name":"lipoxin A4 biosynthesis","type":"exact"},{"name":"lipoxin A4 formation","type":"exact"},{"name":"lipoxin A4 synthesis","type":"exact"}],"termid":"GO:2001303"}


id: PBO:0074755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 114","termid":"PBO:0074755"}


id: FYPO:0004965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is inviable, is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable pear-shaped vegetative cell","termid":"FYPO:0002904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen pear-shaped vegetative cell","synonyms":[{"name":"inviable enlarged pear-shaped vegetative cell","type":"related"},{"name":"inviable enlarged volume pear-shaped vegetative cell","type":"exact"},{"name":"inviable large pear-shaped vegetative cell","type":"related"},{"name":"inviable swollen ice cream cone-shaped vegetative cell","type":"exact"},{"name":"inviable swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"inviable swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell size","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell volume","type":"exact"},{"name":"lethal; swollen pear-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0004965"}


id: GO:0047343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + CTP = CDP-D-glucose + diphosphate.","definition_xrefs":["EC:2.7.7.33","RHEA:18213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"glucose-1-phosphate cytidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00956","MetaCyc:2.7.7.33-RXN"],"synonyms":[{"name":"CDP glucose pyrophosphorylase activity","type":"related"},{"name":"CDP-glucose diphosphorylase activity","type":"related"},{"name":"CDP-glucose pyrophosphorylase activity","type":"related"},{"name":"CTP:D-glucose-1-phosphate cytidylyltransferase activity","type":"related"},{"name":"CTP:alpha-D-glucose-1-phosphate cytidylyltransferase activity","type":"related"},{"name":"CTP:glucose-1-phosphate cytidylyltransferase activity","type":"exact"},{"name":"cytidine diphosphate glucose pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphate-D-glucose pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoglucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047343"}


id: SO:00000020002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant which disrupts the translation of an upstream open reading frame because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["PMID:32926138","PMID:32461616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_variant","termid":"SO:00000000002382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_frameshift_variant","synonyms":[{"name":"uFrameshift (UTRannotator)","type":"exact"}],"termid":"SO:00000020002382"}


id: FYPO:0001814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) under iron starvation conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal cell population growth during iron starvation","synonyms":[{"name":"normal cell population growth during iron depletion","type":"exact"},{"name":"normal cell population growth during iron deprivation","type":"exact"},{"name":"normal growth during iron starvation","type":"broad"}],"termid":"FYPO:0001814"}


id: GO:0110103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A conserved protein complex capable of 5'-3' exoribonuclease activity. It is able to promote RNA polymerase II (RNAPII) transcription termination by degrading pre-mRNA from the newly formed 5' phosphorylated end.","definition_xrefs":["PMID:23200120","PMID:25722373","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase II termination complex","synonyms":[{"name":"TXT complex","type":"exact"}],"termid":"GO:0110103"}


id: PBO:0028814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_primary_amine_oxidase_activity","termid":"PBO:0028814"}


id: PBO:0067503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 643, pseudogene","termid":"PBO:0067503"}


id: GO:0021716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the inferior olivary nucleus structure. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GOC:dgh","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"medulla oblongata structural organization","termid":"GO:0021581"},{"relation_name":"part_of","term_name":"inferior olivary nucleus morphogenesis","termid":"GO:0021714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus structural organization","synonyms":[{"name":"inferior olivary nucleus structural organisation","type":"exact"},{"name":"inferior olive structural organization","type":"related"}],"termid":"GO:0021716"}


id: PBO:0085746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32","termid":"PBO:0085746"}


id: PBO:0028850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_phenotype","termid":"PBO:0028850"}


id: PBO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 4","termid":"PBO:0060016"}


id: GO:0019939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine to form peptidyl-S-palmitoleyl-L-cysteine specifically.","definition_xrefs":["RESID:AA0308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein palmitoleylation","termid":"GO:0045234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-palmitoleyl-L-cysteine biosynthetic process from peptidyl-cysteine","synonyms":[{"name":"peptidyl-S-palmitoleyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-palmitoleyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-palmitoleyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0019939"}


id: PBO:0063327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 3","termid":"PBO:0063327"}


id: GO:0008603
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"}]},"cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme cAMP-dependent protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"cAMP-dependent protein kinase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3',5' cAMP-dependent protein kinase regulator activity","type":"exact"},{"name":"3',5'-cAMP-dependent protein kinase regulator activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-dependent protein kinase regulator activity","type":"exact"},{"name":"cAMP-dependent protein kinase, intrinsic regulator activity","type":"narrow"},{"name":"cyclic AMP-dependent protein kinase regulator activity","type":"exact"}],"termid":"GO:0008603","terms_by_termid":{"GO:0004862":null}}


id: PBO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C17orf28 ortholog 1","termid":"PBO:0001080"}


id: PBO:0064614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 4","termid":"PBO:0064614"}


id: GO:0032159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in germ tubes and hyphae in fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cap","termid":"GO:0032159"}


id: GO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:dph","PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity fructose transmembrane transporter activity","synonyms":[{"name":"high affinity fructose transmembrane transporter activity","type":"exact"}],"termid":"GO:0061486"}


id: PBO:0056348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 6","termid":"PBO:0056348"}


id: PBO:0038973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2b receptor pseudogene 1","termid":"PBO:0038973"}


id: MOD:01546
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N'-derivatized histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01546"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PATO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a tumour by virtue of the bearer's exhbiting the morphological characteristics of a glandular epithelial cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomatous","termid":"PATO:0002090"}


id: MOD:00494
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12185208","Unimod:123#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","synonyms":[{"name":"ICAT-H","type":"related"},{"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","type":"related"}],"termid":"MOD:00494"}


id: PBO:0080946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 1 pseudogene 1","termid":"PBO:0080946"}


id: PBO:0013065
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenine Nucleotide Carrier","termid":"PBO:0013065"}


id: PBO:0005763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf22","termid":"PBO:0005763"}


id: SO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001203 RNA_polymerase_promoter (obsolete SO:0001203)","synonyms":[{"name":"RNA polymerase promoter","type":"exact"}],"termid":"SO:0001203"}


id: GO:0010581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An process which modulate the frequency, rate or extent of starch biosynthesis, the chemical reactions and pathways resulting in the formation of starch.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch biosynthetic process","termid":"GO:0019252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch biosynthetic process","termid":"GO:0010581"}


id: PBO:0071760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 7","termid":"PBO:0071760"}


id: PBO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrt1","termid":"PBO:0016045"}


id: PATO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed","termid":"PATO:0001630"}


id: SO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved GC-rich region located upstream of the start point of eukaryotic transcription units which may occur in multiple copies or in either orientation; consensus=GGGCGG.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC_rich_promoter_region","synonyms":[{"name":"GC rich promoter region","type":"exact"},{"name":"GC-rich region","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:GC_rich_promoter_region","type":"exact"}],"termid":"SO:0000173"}


id: GO:0048350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"positively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"activation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"upregulation of paraxial mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048350"}


id: PBO:0084028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi-localized protein with homology to gamma-adaptin; interacts with and regulates Arf1p and Arf2p in a GTP-dependent manner in order to facilitate traffic through the late Golgi; GGA1 has a paralog, GGA2, that arose from the whole genome duplication","termid":"PBO:0084028"}


id: PBO:0078941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 8-1","termid":"PBO:0078941"}


id: PBO:0081529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 439","termid":"PBO:0081529"}


id: PBO:0109080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3104","termid":"PBO:0109080"}


id: GO:0071900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}


id: FYPO:0003405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased glyoxalase III activity","synonyms":[{"name":"reduced glyoxalase III activity","type":"exact"}],"termid":"FYPO:0003405"}


id: PBO:0076419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b pseudogene 2","termid":"PBO:0076419"}


id: PATO:0000510
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000510 temperature sensitivity value (obsolete PATO:0000510)","termid":"PATO:0000510"}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: GO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["PMID:14665680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid catabolic process","termid":"GO:0070393"},{"relation_name":"is_a","term_name":"lipoteichoic acid metabolic process","termid":"GO:0070394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid catabolic process","synonyms":[{"name":"lipoteichoic acid breakdown","type":"exact"},{"name":"lipoteichoic acid catabolism","type":"exact"},{"name":"lipoteichoic acid degradation","type":"exact"}],"termid":"GO:0070396"}


id: GO:0035738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the manifestation of some change or damage to the bitten organism.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of process in another organism","synonyms":[{"name":"envenomation resulting in modification of morphology or physiology of other organism","type":"exact"},{"name":"envenomation resulting in modulation of process in other organism","type":"exact"}],"termid":"GO:0035738"}


id: PBO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.4.1","termid":"PBO:0000262"}


id: PBO:0086162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for respiratory growth; localized to both the nucleus and mitochondrion; may interact with transcription factors to mediate the transition to respiratory growth and activate transcription of nuclear and mitochondrial genes","termid":"PBO:0086162"}


id: MOD:01284
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:10825247","PubMed:9254591","PubMed:15541752","Unimod:206#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site C","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01284"}


id: PBO:0061693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 pseudogene 1","termid":"PBO:0061693"}


id: FYPO:0000720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal fatty acid synthase activity","synonyms":[{"name":"abnormal FAS activity","type":"exact"}],"termid":"FYPO:0000720"}


id: GO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3-amino-6-acetamidohexanoate = L-glutamate + 3-oxo-6-acetamidohexanoate.","definition_xrefs":["EC:2.6.1.65","MetaCyc:2.6.1.65-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N6-acetyl-beta-lysine transaminase activity","secondary_identifiers":["RHEA:16889"],"synonyms":[{"name":"6-acetamido-3-aminohexanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N(6)-acetyl-beta-lysine aminotransferase activity","type":"related"},{"name":"N6-acetyl-beta-lysine aminotransferase activity","type":"exact"},{"name":"epsilon-acetyl-beta-lysine aminotransferase activity","type":"related"}],"termid":"GO:0047317"}


id: PATO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to detect or perceive external stimulation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity toward","synonyms":[{"name":"sensitivity","type":"exact"}],"termid":"PATO:0000085"}


id: PBO:0060824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN1 antisense RNA 1","termid":"PBO:0060824"}


id: PBO:0080292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 56 pseudogene","termid":"PBO:0080292"}


id: GO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Hulle cell development","termid":"GO:0070808"}


id: FYPO:0002066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has no septum, is elongated, and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000032","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated aseptate cell","synonyms":[{"name":"inviable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"inviable long aseptate cell","type":"exact"},{"name":"lethal; elongated aseptate cell","type":"exact"}],"termid":"FYPO:0002066"}


id: PBO:0068790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 27, pseudogene","termid":"PBO:0068790"}


id: GO:0032686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of hepatocyte growth factor production.","definition_xrefs":["GOC:mah","PMID:1838014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of hepatocyte growth factor production","termid":"GO:0032646"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"hepatocyte growth factor production","termid":"GO:0032605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte growth factor production","secondary_identifiers":["GO:0048178"],"synonyms":[{"name":"down regulation of hepatocyte growth factor production","type":"exact"},{"name":"down-regulation of hepatocyte growth factor production","type":"exact"},{"name":"downregulation of hepatocyte growth factor production","type":"exact"},{"name":"inhibition of hepatocyte growth factor production","type":"narrow"},{"name":"negative regulation of HGF production","type":"exact"},{"name":"negative regulation of hepatocyte growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of scatter factor production","type":"exact"}],"termid":"GO:0032686"}


id: PBO:0056225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E1","termid":"PBO:0056225"}


id: FYECO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was carried out in vivo.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in vivo","termid":"FYECO:0000141"}


id: PBO:0026820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_endosome","termid":"PBO:0026820"}


id: GO:1990709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic active zone.","definition_xrefs":["GOC:pr","PMID:16865347","PMID:17068967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone organization","synonyms":[{"name":"presynaptic active zone organisation","type":"exact"}],"termid":"GO:1990709"}


id: PBO:0054363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1756","termid":"PBO:0054363"}


id: GO:0102897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abietal + NADPH + O2 = abietate + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"abietadienal hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-8510","RHEA:56928"],"termid":"GO:0102897"}


id: GO:0048318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm development","termid":"GO:0048318"}


id: GO:0006897
data:
  {"annotated_genes":["SJAG_02245","SJAG_03072","SJAG_04050","SJAG_01167","SJAG_04479","SJAG_05011","SJAG_01981","SJAG_02282","SJAG_02384","SJAG_02572","SJAG_01384","SJAG_04931","SJAG_03987","SJAG_02684","SJAG_03268","SJAG_01373","SJAG_03504","SJAG_02104","SJAG_03086","SJAG_04644","SJAG_03718","SJAG_00032","SJAG_03137","SJAG_00185","SJAG_03581","SJAG_00152","SJAG_04517","SJAG_01030","SJAG_02511","SJAG_01379","SJAG_03631","SJAG_04051","SJAG_01017","SJAG_02848","SJAG_01722","SJAG_00104","SJAG_03119","SJAG_02805","SJAG_01258","SJAG_00649","SJAG_04001","SJAG_02320","SJAG_04554","SJAG_03643","SJAG_01748","SJAG_00803","SJAG_00402","SJAG_01732","SJAG_01686","SJAG_03465","SJAG_03250","SJAG_04052","SJAG_04465","SJAG_02228","SJAG_03010","SJAG_04466","SJAG_00114","SJAG_00800","SJAG_02177","SJAG_02789","SJAG_00405","SJAG_04100","SJAG_02075","SJAG_03088","SJAG_03596","SJAG_02166","SJAG_04457","SJAG_04724","SJAG_05209","SJAG_00907","SJAG_00700","SJAG_03146","SJAG_00514","SJAG_00521","SJAG_04666","SJAG_03044","SJAG_04509","SJAG_01268","SJAG_01206","SJAG_00355","SJAG_03145","SJAG_00970","SJAG_05198","SJAG_04886","SJAG_04343","SJAG_05296","SJAG_02707","SJAG_01964","SJAG_00137","SJAG_02626","SJAG_00546","SJAG_03404","SJAG_02857"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83826,84084,84319,84347,86000,86843,86911,87647,90023,90166,90193,90387,90941,93052,93734,94064,94971,95043,95452,95600,95813,95838,95988,96081,97571,97844,98247,98638,98889,99050,99194,99388,99445,100727,101255,101272,102024,102969,103007,103279,103678,104323,104863,105099,105191,106306,106387,107617,107992,108290,108313,111004,112316,112342,113622,114241,114585,114915],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[102134,106815,104180,113621,101826,107796,114953,108435,92413,88722,107777,86468,104458,87687,91038,98866,107715,88349,92432,109031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072583"},{"annotations":[84184],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120207"},{"annotations":[90724],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045806"},{"annotations":[72121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031623"},{"annotations":[114936,107788,107142],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000369"},{"annotations":[109361,86045,99063,76332,88842,77266,109488,88564,87123],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030100"},{"annotations":[114946,108436,104181,107148,92433,113624,88350,101827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070086"}]},"cv_name":"biological_process","definition":"A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a part of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["ISBN:0716731363","GOC:mah","ISBN:0198506732","Wikipedia:Endocytosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"import into 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import into cell","type":"exact"},{"name":"nonselective vesicle endocytosis","type":"related"},{"name":"plasma membrane invagination","type":"narrow"},{"name":"vesicle endocytosis","type":"exact"}],"termid":"GO:0006897","terms_by_termid":{"GO:0006897":null,"GO:0030100":null,"GO:0031623":null,"GO:0045806":null,"GO:0070086":null,"GO:0072583":null,"GO:0120207":null,"GO:2000369":null}}


id: PBO:0068638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 18, pseudogene","termid":"PBO:0068638"}


id: PBO:0051051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-8","termid":"PBO:0051051"}


id: PBO:0083592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0017","termid":"PBO:0083592"}


id: PBO:0092020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uag), mitochondrial","termid":"PBO:0092020"}


id: PBO:0074024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 2","termid":"PBO:0074024"}


id: FYPO:0001305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of any long-chain fatty acid-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abnormal lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001305"}


id: GO:0070564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"activation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"positive regulation of VDR signaling pathway","type":"exact"},{"name":"positive regulation of vitamin D receptor signalling pathway","type":"exact"},{"name":"stimulation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"up regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"up-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"upregulation of vitamin D receptor signaling pathway","type":"exact"}],"termid":"GO:0070564"}


id: PBO:0085003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of cytosolic calcium homeostasis; localizes to the plasma membrane, concentrating at the bud neck during cell division; regulated by Crz1p through a CDRE promoter element; non-essential gene; putative transporter with sequence similarity to human SLC10A7; functional homolog of C. albicans RCH1","termid":"PBO:0085003"}


id: PATO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000010 relative speed (obsolete PATO:0000010)","termid":"PATO:0000010"}


id: PR:Q1MTR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar import and degradation protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.14c","synonyms":[{"name":"Spom972h-SPBC1685.14c","type":"exact"}],"termid":"PR:Q1MTR3"}


id: PBO:0073252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN4 antisense RNA 1","termid":"PBO:0073252"}


id: SO:1001265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoded_mRNA that was modified by an alteration of codon meaning.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"codon_redefined","termid":"SO:0000882"},{"relation_name":"is_a","term_name":"recoded_mRNA","termid":"SO:1001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_recoded_by_codon_redefinition","synonyms":[{"name":"mRNA recoded by codon redefinition","type":"exact"}],"termid":"SO:1001265"}


id: PBO:0085869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has weak similarity to proteins involved in thiamin metabolism; expression is induced in the absence of thiamin","termid":"PBO:0085869"}


id: GO:1990524
data:
  {"annotated_genes":["SJAG_07008"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105849],"is_not":false,"summary":null,"term":"GO:1990524"}]},"cv_name":"cellular_component","definition":"A protein complex located in the inner membrane of mitochondria that is involved in the assembly of the peripheral (or stator) stalk of the mitochondrial proton-transporting ATP synthase (also known as the F1F0 ATP synthase). In budding yeast, this complex includes Ina22p and Ina17p.","definition_xrefs":["GOC:rn","PMID:24942160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"INA complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"INAC","type":"exact"}],"termid":"GO:1990524","terms_by_termid":{"GO:1990524":null}}


id: PBO:0078916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 5-1","termid":"PBO:0078916"}


id: GO:0010207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a photosystem II complex on the thylakoid membrane. The photosystem II complex consists of at least 20 polypeptides and around 80 cofactors in most organisms.","definition_xrefs":["GOC:pz","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem II assembly","termid":"GO:0010207"}


id: PBO:0084798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein kinase; negatively regulates activity of the pyruvate dehydrogenase complex by phosphorylating the ser-133 residue of the Pda1p subunit; acts in concert with kinase Pkp1p and phosphatases Ptc5p and Ptc6p; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084798"}


id: PBO:0075382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX21 antisense divergent transcript 1","termid":"PBO:0075382"}


id: PBO:0072211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 10","termid":"PBO:0072211"}


id: GO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen sampling carried out by dendritic cells in the mucosal-associated lymphoid tissue.","definition_xrefs":["GOC:jal","PMID:15681746","PMID:11896763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen sampling in mucosal-associated lymphoid tissue","termid":"GO:0002404"},{"relation_name":"part_of","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling by dendritic cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling by dendritic cells in MALT","type":"exact"}],"termid":"GO:0002405"}


id: PBO:0111822
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAT repeat protein","termid":"PBO:0111822"}


id: GO:0042748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"All sleep stages in the circadian sleep/wake cycle other than REM sleep. These stages are characterized by a slowing of brain waves and other physiological functions.","definition_xrefs":["GOC:jl","PMID:33537937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}


id: PBO:0073147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog A, COPII coat complex component","termid":"PBO:0073147"}


id: GO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromosome involved in sex determination.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"sex chromosome","termid":"GO:0000803"}


id: GO:0150014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the apical pole of a neuron, and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["GOC:aruk","PMID:9214543","PMID:1720142","GO:bc","PMID:20629984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical distal dendrite","termid":"GO:0150014"}


id: PATO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the relative change in the bearer's length or the bearer's volume when being stretched or squashed.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strain","termid":"PATO:0001034"}


id: PBO:0083495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL168C/SET2","termid":"PBO:0083495"}


id: PBO:0066554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17 pseudogene 1","termid":"PBO:0066554"}


id: PR:O74184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of rapamycin complex subunit LST8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02946","PANTHER:PTHR19842:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein wat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.05c","secondary_identifiers":["UniProtKB:O74184"],"synonyms":[{"name":"Spom972h-MLST8","type":"exact"},{"name":"WD repeat-containing protein pop3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74184"}


id: SO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An allele is one of a set of coexisting sequence variants of a gene.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele","secondary_identifiers":["http://en.wikipedia.org/wiki/Allele"],"synonyms":[{"name":"allelomorph","type":"exact"}],"termid":"SO:0001023"}


id: GO:0034478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylglycerols, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylglycerol catabolic process","synonyms":[{"name":"phosphatidylglycerol breakdown","type":"exact"},{"name":"phosphatidylglycerol catabolism","type":"exact"},{"name":"phosphatidylglycerol degradation","type":"exact"}],"termid":"GO:0034478"}


id: PBO:0087090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L7A; required for processing of 27SA3 pre-rRNA to 27SB pre-rRNA during assembly of large ribosomal subunit; depletion leads to a turnover of pre-rRNA; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2); binds to Domain II of 25S and 5.8S rRNAs; homologous to mammalian ribosomal protein L7 and bacterial L30; RPL7A has a paralog, RPL7B, that arose from the whole genome duplication","termid":"PBO:0087090"}


id: GO:0071808
data:
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id: PBO:0040013
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id: GO:0100062
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id: PBO:0108599
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id: GO:0060815
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id: PBO:0028812
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id: GO:0036160
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id: PR:P87233
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id: PBO:0028955
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id: GO:1990220
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id: PBO:0064376
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id: PR:Q9UT43
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id: GO:0102798
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id: GO:0046854
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id: PBO:0005433
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id: PBO:0056193
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id: GO:1905845
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id: PBO:0081806
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id: PBO:0088526
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id: GO:0016746
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id: GO:0016282
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  {"annotated_genes":["SJAG_00662","SJAG_04744","SJAG_04981","SJAG_02164","SJAG_02628","SJAG_02263","SJAG_01117","SJAG_03472","SJAG_04891","SJAG_03147","SJAG_02376","SJAG_04900","SJAG_02995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86111,90927,92229,92993,93872,93929,95059,96226,101423,101717,103134,106819,107453],"is_not":false,"summary":null,"term":"GO:0016282"}]},"cv_name":"cellular_component","definition":"A protein complex composed of the 40S ribosomal subunit plus eIF1, eIF1A, eIF3, eIF5, and eIF2-GTP-bound methionyl-initiator methionine tRNA.","definition_xrefs":["PMID:15145049","PMID:29735639","PMID:25742741","GOC:hjd","PMID:16510876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation preinitiation complex","termid":"GO:0070993"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_01117":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eukaryotic 43S preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic 43S pre-initiation complex","type":"exact"}],"termid":"GO:0016282","terms_by_termid":{"GO:0016282":null}}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: GO:0051091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of DNA-binding transcription factor activity","termid":"GO:0051090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of DNA-binding transcription factor activity","secondary_identifiers":["GO:1904169"],"synonyms":[{"name":"activation of transcription factor activity","type":"narrow"},{"name":"positive regulation of DNA binding transcription factor activity","type":"exact"},{"name":"positive regulation of sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"positive regulation of thyroid hormone receptor activity","type":"narrow"},{"name":"positive regulation of transcription factor activity","type":"broad"},{"name":"stimulation of transcription factor activity","type":"narrow"},{"name":"up regulation of transcription factor activity","type":"exact"},{"name":"up-regulation of transcription factor activity","type":"exact"},{"name":"upregulation of transcription factor activity","type":"exact"}],"termid":"GO:0051091"}


id: PBO:0029922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_FPP_level","termid":"PBO:0029922"}


id: PBO:0071602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 19","termid":"PBO:0071602"}


id: PATO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's rate of change of the position.","direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"velocity","termid":"PATO:0002242"}


id: PBO:0067994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 296","termid":"PBO:0067994"}


id: PR:G2TRU0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ost5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit ost5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.19c","synonyms":[{"name":"Spom972h-ost5","type":"exact"},{"name":"oligosaccharyl transferase subunit ost5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit zeta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRU0"}


id: GO:0003146
data:
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id: PBO:0083706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized protein of unknown function","termid":"PBO:0083706"}


id: GO:0035145
data:
  {"annotated_genes":["SJAG_02879","SJAG_04025","SJAG_01852","SJAG_05014","SJAG_01252","SJAG_00888"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87665,88502,89727,99287,101997,105908],"is_not":false,"summary":null,"term":"GO:0035145"}]},"cv_name":"cellular_component","definition":"A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:11532962","PMID:11743026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_01252":null,"SJAG_01852":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"exon-exon junction complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EJC","type":"exact"},{"name":"exon junction complex","type":"exact"}],"termid":"GO:0035145","terms_by_termid":{"GO:0035145":null}}


id: PBO:0090788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (NDR family) Sid2","termid":"PBO:0090788"}


id: GO:0070080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a titin Z protein domain, which recognizes and binds to the C-terminal calmodulin-like domain of alpha-actinin-2 (Act-EF34), adopts a helical structure, and binds in a groove formed by the two planes between the helix pairs of Act-EF34.","definition_xrefs":["InterPro:IPR015129","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"titin Z domain binding","synonyms":[{"name":"Z repeat domain binding","type":"exact"}],"termid":"GO:0070080"}


id: GO:0022607
data:
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id: GO:1900913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"positively_regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin biosynthetic process","synonyms":[{"name":"activation of olefin anabolism","type":"narrow"},{"name":"activation of olefin biosynthesis","type":"narrow"},{"name":"activation of olefin biosynthetic process","type":"narrow"},{"name":"activation of olefin formation","type":"narrow"},{"name":"activation of olefin synthesis","type":"narrow"},{"name":"positive regulation of olefin anabolism","type":"related"},{"name":"positive regulation of olefin biosynthesis","type":"related"},{"name":"positive regulation of olefin formation","type":"related"},{"name":"positive regulation of olefin synthesis","type":"related"},{"name":"up regulation of olefin anabolism","type":"related"},{"name":"up regulation of olefin biosynthesis","type":"related"},{"name":"up regulation of olefin biosynthetic process","type":"exact"},{"name":"up regulation of olefin formation","type":"related"},{"name":"up regulation of olefin synthesis","type":"related"},{"name":"up-regulation of olefin anabolism","type":"related"},{"name":"up-regulation of olefin biosynthesis","type":"related"},{"name":"up-regulation of olefin biosynthetic process","type":"exact"},{"name":"up-regulation of olefin formation","type":"related"},{"name":"up-regulation of olefin synthesis","type":"related"},{"name":"upregulation of olefin anabolism","type":"related"},{"name":"upregulation of olefin biosynthesis","type":"related"},{"name":"upregulation of olefin biosynthetic process","type":"exact"},{"name":"upregulation of olefin formation","type":"related"},{"name":"upregulation of olefin synthesis","type":"related"}],"termid":"GO:1900913"}


id: PBO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2","termid":"PBO:0043741"}


id: MOD:00169
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-cysteinyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["PubMed:2897081","RESID:AA0160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-cysteinyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPICys","type":"exact"},{"name":"LIPID GPI-anchor amidated cysteine","type":"exact"},{"name":"N-cysteinyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00169"}


id: GO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxygen","termid":"GO:0003032"}


id: GO:0050520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + choline = 1,2-diacyl-sn-glycero-3-phosphocholine + CMP + H+.","definition_xrefs":["RHEA:14597","EC:2.7.8.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine synthase activity","secondary_identifiers":["KEGG_REACTION:R05794","MetaCyc:2.7.8.24-RXN"],"synonyms":[{"name":"CDP-diacylglycerol:choline O-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-choline O-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiglyceride-choline O-phosphatidyltransferase activity","type":"related"},{"name":"PC synthase activity","type":"related"}],"termid":"GO:0050520"}


id: GO:0009073
data:
  {"annotated_genes":["SJAG_00224","SJAG_03775","SJAG_00518","SJAG_02400","SJAG_01455","SJAG_03124","SJAG_00337","SJAG_03580","SJAG_00248","SJAG_04652","SJAG_04747","SJAG_03055","SJAG_02505","SJAG_05007","SJAG_03167","SJAG_01346","SJAG_03485","SJAG_03312","SJAG_01137","SJAG_00592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87255,90733,97379,110213],"is_not":false,"summary":null,"term":"GO:0009073"},{"annotations":[100950,98433,90894,103052,111135,103982,93185,106535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[104731,86009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[99629,100508,87719,110780,93186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[110926,94491,86010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_00248":null,"SJAG_00337":null,"SJAG_00518":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02400":null,"SJAG_02505":null,"SJAG_03055":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_03485":null,"SJAG_03580":null,"SJAG_03775":null,"SJAG_04652":null,"SJAG_04747":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"aromatic amino acid family biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:COMPLETE-ARO-PWY","GO:0016089"],"synonyms":[{"name":"aromatic amino acid family anabolism","type":"exact"},{"name":"aromatic amino acid family biosynthesis","type":"exact"},{"name":"aromatic amino acid family biosynthetic process, shikimate pathway","type":"related"},{"name":"aromatic amino acid family formation","type":"exact"},{"name":"aromatic amino acid family synthesis","type":"exact"}],"termid":"GO:0009073","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006571":null,"GO:0009073":null,"GO:0009094":null}}


id: SO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uniparental disomy is a sequence_alteration where a diploid individual receives two copies for all or part of a chromosome from the father and no copies of the same chromosome or region from the mother.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UPD","termid":"SO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal_uniparental_disomy","synonyms":[{"name":"paternal uniparental disomy","type":"exact"}],"termid":"SO:0001746"}


id: SO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A noncoding RNA that binds to a specific amino acid to allow that amino acid to be used by the ribosome during translation of RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tRNA_encoding","termid":"SO:0000663"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_gene","synonyms":[{"name":"tRNA gene","type":"exact"}],"termid":"SO:0001272"}


id: PBO:0087290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA1 at HML; ALPHA1 encodes a transcriptional coactivator involved in the regulation of mating-type alpha-specific gene expression","termid":"PBO:0087290"}


id: PBO:0091518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog","termid":"PBO:0091518"}


id: PR:Q9HDV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine cleavage system H protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03446","PANTHER:PTHR11715:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system H protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.01","secondary_identifiers":["UniProtKB:Q9HDV9"],"synonyms":[{"name":"Spom972h-GCSH","type":"exact"},{"name":"glycine decarboxylase complex subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV9"}


id: PBO:0088378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40","termid":"PBO:0088378"}


id: PBO:0080370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VOPP1 WW domain binding protein","termid":"PBO:0080370"}


id: PBO:0083159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the dubious ORF YBR056W-A","termid":"PBO:0083159"}


id: GO:0046202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"cyanide metabolic process","termid":"GO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide biosynthetic process","synonyms":[{"name":"cyanide anabolism","type":"exact"},{"name":"cyanide biosynthesis","type":"exact"},{"name":"cyanide formation","type":"exact"},{"name":"cyanide synthesis","type":"exact"}],"termid":"GO:0046202"}


id: PBO:0088551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar polyphosphatase","termid":"PBO:0088551"}


id: GO:0160036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of postsynaptic density assembly.","definition_xrefs":["PMID:17626212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic density assembly","termid":"GO:0099151"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of postsynaptic density organization","termid":"GO:1905876"},{"relation_name":"positively_regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of postsynaptic density assembly","termid":"GO:0160036"}


id: PBO:0044531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defender against cell death 1","termid":"PBO:0044531"}


id: GO:0033134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ubiquitin activating enzyme, any of the E1 proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small protein activating enzyme binding","termid":"GO:0044388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"ubiquitin activating enzyme binding","termid":"GO:0033134"}


id: PBO:0073449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 4","termid":"PBO:0073449"}


id: PBO:0085444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Porphobilinogen deaminase; catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane, the third step in heme biosynthesis; localizes to the cytoplasm and nucleus; expression is regulated by Hap2p-Hap3p, but not by levels of heme; human homolog HMBS can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0085444"}


id: GO:0120015
data:
  {"annotated_genes":["SJAG_03718","SJAG_01590","SJAG_01329","SJAG_02323","SJAG_02375","SJAG_01722","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90394,98738,102441,104330,105491,107450,112348],"is_not":false,"summary":null,"term":"GO:0120015"}]},"cv_name":"molecular_function","definition":"Removes a sterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:krc","PMID:24220498","PMID:20823909","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01329":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"sterol transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane sterol transfer activity","type":"narrow"},{"name":"sterol carrier activity","type":"exact"}],"termid":"GO:0120015","terms_by_termid":{"GO:0120015":null}}


id: PBO:0079695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 3","termid":"PBO:0079695"}


id: PATO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000024 sporophytic compatability (obsolete PATO:0000024)","termid":"PATO:0000024"}


id: FYPO:0004992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during interphase of the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiotic cell cycle","termid":"FYPO:0004991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during meiotic interphase","synonyms":[{"name":"decreased protein accumulation during meiotic interphase","type":"related"},{"name":"decreased protein level during interphase of meiotic cell cycle","type":"exact"},{"name":"reduced protein level during meiotic interphase","type":"exact"}],"termid":"FYPO:0004992"}


id: PBO:0035797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation_during_vegetative_growth","termid":"PBO:0035797"}


id: PBO:0042644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 19 pseudogene","termid":"PBO:0042644"}


id: FYPO:0005564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are shorter and thinner than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thin stable microtubule bundle","termid":"FYPO:0005560"},{"relation_name":"is_a","term_name":"short stable microtubule bundle","termid":"FYPO:0005562"},{"relation_name":"is_a","term_name":"short disorganized microtubule bundle","termid":"FYPO:0005796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"short, thin stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle length and thickness","type":"exact"},{"name":"short, thin Q-MT bundles","type":"exact"},{"name":"short, thin quiescent cell MT bundle","type":"exact"},{"name":"short, thin quiescent cell microtubule bundle","type":"exact"},{"name":"short, thin stable microtubule array","type":"related"},{"name":"short, thin static microtubule bundle","type":"exact"}],"termid":"FYPO:0005564"}


