# terms

id: PBO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2","termid":"PBO:0060936"}


id: PBO:0063971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 5","termid":"PBO:0063971"}


id: GO:0035176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior directed towards society, or taking place between members of the same species. Occurs predominantly, or only, in individuals that are part of a group.","definition_xrefs":["PMID:12848939","GOC:jh2","Wikipedia:Social_behavior"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"social behavior","synonyms":[{"name":"cooperative behavior","type":"related"},{"name":"social behaviour","type":"exact"}],"termid":"GO:0035176"}


id: GO:0045733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"acetate catabolic process","secondary_identifiers":["GO:0019663"],"synonyms":[{"name":"acetate breakdown","type":"exact"},{"name":"acetate catabolism","type":"exact"},{"name":"acetate degradation","type":"exact"},{"name":"homoacetate catabolic process","type":"related"}],"termid":"GO:0045733"}


id: PBO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 6","termid":"PBO:0061516"}


id: FYPO:0007302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect when the cell is subject to heat shock. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"protein absent from cell during heat shock","synonyms":[{"name":"protein absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"protein absent from cell during heat shock during vegetative growth","type":"exact"},{"name":"undetectable cellular protein level during heat shock","type":"exact"}],"termid":"FYPO:0007302"}


id: PBO:0051913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB1 divergent transcript","termid":"PBO:0051913"}


id: GO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elastin (obsolete GO:0001529)","synonyms":[{"name":"elastin","type":"exact"}],"termid":"GO:0001529"}


id: RO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_after","termid":"RO:0002086"}


id: PBO:0053372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 297","termid":"PBO:0053372"}


id: PBO:0091589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A) bearing, possible SPAC22E12.02 UTR","termid":"PBO:0091589"}


id: GO:0034042
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92292],"is_not":false,"summary":null,"term":"GO:0034042"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of 5-formyluracil bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar.","definition_xrefs":["PMID:17641464","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","termid":"GO:0000703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"5-formyluracil DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-foU DNA N-glycosylase activity","type":"exact"}],"termid":"GO:0034042","terms_by_termid":{"GO:0034042":null}}


id: FYPO:0005957
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115423],"is_not":false,"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation during vegetative growth","termid":"FYPO:0005956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"decreased protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005957","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0082279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anti-repressor that increases 2 micron plasmid copy number; increases 2 micron plasmid copy number by relieving repression of the FLP1 site-specific recombinase caused by the Rep1-Rep2p trascription regulator; also itself repressed by the Rep1p-Rep2p complex","termid":"PBO:0082279"}


id: PBO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 X-linked","termid":"PBO:0044701"}


id: PBO:0088138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity; serine protease of the subtilisin family; involved in protein degradation in the vacuole and required for full protein degradation during sporulation; activity inhibited by Pbi2p; protein abundance increases in response to DNA replication stress; PRB1 has a paralog, YSP3, that arose from the whole genome duplication","termid":"PBO:0088138"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: GO:0098975
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma.","definition_xrefs":["Wikipedia:Neuromuscular_junction&oldid=723623502","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse","termid":"GO:0098794"},{"relation_name":"part_of","term_name":"neuromuscular junction","termid":"GO:0031594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynapse of neuromuscular junction","termid":"GO:0098975"}


id: GO:0031542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"positive regulation of anthocyanin metabolic process","termid":"GO:0031539"},{"relation_name":"is_a","term_name":"regulation of anthocyanin biosynthetic process","termid":"GO:0031540"},{"relation_name":"positively_regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anthocyanin biosynthetic process","synonyms":[{"name":"activation of anthocyanin biosynthetic process","type":"narrow"},{"name":"positive regulation of anthocyanin anabolism","type":"exact"},{"name":"positive regulation of anthocyanin biosynthesis","type":"exact"},{"name":"positive regulation of anthocyanin formation","type":"exact"},{"name":"positive regulation of anthocyanin synthesis","type":"exact"},{"name":"stimulation of anthocyanin biosynthetic process","type":"narrow"},{"name":"up regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"up-regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"upregulation of anthocyanin biosynthetic process","type":"exact"}],"termid":"GO:0031542"}


id: GO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfite transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfite transport by transcription from RNA polymerase II promoter (obsolete GO:0100006)","termid":"GO:0100006"}


id: PBO:0056390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKAPK5 antisense RNA 1","termid":"PBO:0056390"}


id: GO:0033365
data:
  {"annotated_genes":["SJAG_00471","SJAG_02797","SJAG_04294","SJAG_01311","SJAG_05303","SJAG_00277","SJAG_04366","SJAG_03729","SJAG_04218","SJAG_04489","SJAG_02330","SJAG_01597","SJAG_01917","SJAG_01854","SJAG_02619","SJAG_03385","SJAG_01178","SJAG_04533","SJAG_05319","SJAG_02867","SJAG_00229","SJAG_05259","SJAG_02524","SJAG_00284","SJAG_05210","SJAG_03404","SJAG_04703","SJAG_04349","SJAG_03693","SJAG_01065","SJAG_01516","SJAG_02398","SJAG_00108","SJAG_00883","SJAG_01088","SJAG_02274","SJAG_02809","SJAG_01488","SJAG_01224","SJAG_02117","SJAG_01449","SJAG_02074","SJAG_01546","SJAG_02914","SJAG_02361","SJAG_03324","SJAG_01909","SJAG_03593","SJAG_00373","SJAG_06270","SJAG_01013","SJAG_03865","SJAG_03327","SJAG_03783","SJAG_03411","SJAG_00586","SJAG_00959","SJAG_00840","SJAG_01001","SJAG_03440","SJAG_04684","SJAG_01282","SJAG_01780","SJAG_00687","SJAG_02912","SJAG_05978","SJAG_03540","SJAG_04129","SJAG_03416","SJAG_02731","SJAG_01083","SJAG_03453","SJAG_03915","SJAG_05300","SJAG_00375","SJAG_03662","SJAG_01949","SJAG_03508","SJAG_01782","SJAG_03515","SJAG_04455","SJAG_01586","SJAG_05266","SJAG_02693","SJAG_02529","SJAG_01281","SJAG_04912","SJAG_00065","SJAG_04051","SJAG_01560","SJAG_01297","SJAG_03502","SJAG_01825","SJAG_02210","SJAG_01684","SJAG_04901","SJAG_04468","SJAG_16459","SJAG_04014","SJAG_00891","SJAG_07010","SJAG_00968","SJAG_02336","SJAG_01981","SJAG_04996","SJAG_01621","SJAG_02355","SJAG_01223","SJAG_04208","SJAG_00181","SJAG_01240","SJAG_01442","SJAG_01951","SJAG_01879","SJAG_02065","SJAG_02997","SJAG_01229","SJAG_03396","SJAG_05414","SJAG_02588","SJAG_03892","SJAG_01328","SJAG_00093","SJAG_01084","SJAG_03415","SJAG_02208","SJAG_03002","SJAG_04336","SJAG_01242","SJAG_02034","SJAG_00196","SJAG_05315","SJAG_02761","SJAG_03643","SJAG_00326","SJAG_02998","SJAG_01360","SJAG_03959","SJAG_02757","SJAG_00383","SJAG_01558","SJAG_00429","SJAG_01834","SJAG_03633","SJAG_00416","SJAG_04763","SJAG_00360","SJAG_01004","SJAG_00175","SJAG_03648","SJAG_03970","SJAG_02831","SJAG_02456","SJAG_03376","SJAG_04645","SJAG_00803","SJAG_01584","SJAG_00064","SJAG_00082","SJAG_03470","SJAG_01127","SJAG_01655","SJAG_02514","SJAG_03737","SJAG_03048","SJAG_04259","SJAG_03560","SJAG_04411","SJAG_02354","SJAG_01615","SJAG_03315","SJAG_03591","SJAG_00821","SJAG_03358","SJAG_02045","SJAG_04126","SJAG_01750","SJAG_01940","SJAG_03300","SJAG_03250","SJAG_02397","SJAG_00702","SJAG_01759","SJAG_03907","SJAG_00569","SJAG_02425","SJAG_04466","SJAG_01999","SJAG_03437","SJAG_03684","SJAG_00208","SJAG_02520","SJAG_03955","SJAG_03299","SJAG_05302","SJAG_01378","SJAG_01840","SJAG_01790","SJAG_00564","SJAG_02437","SJAG_04148","SJAG_02789","SJAG_01405","SJAG_03244","SJAG_04641","SJAG_03930","SJAG_04936","SJAG_04432","SJAG_00603","SJAG_00640","SJAG_00364","SJAG_01640","SJAG_02584","SJAG_02695","SJAG_02077","SJAG_03781","SJAG_01686","SJAG_01496","SJAG_01185","SJAG_00279","SJAG_01371","SJAG_02228","SJAG_00380","SJAG_01775","SJAG_00404","SJAG_02917","SJAG_01789","SJAG_00204","SJAG_03756","SJAG_01165","SJAG_03986","SJAG_04552","SJAG_01120","SJAG_05220","SJAG_01374","SJAG_02592","SJAG_00032","SJAG_01211","SJAG_00823","SJAG_00918","SJAG_01716","SJAG_03976","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97396,89600,91789,101143,103661,106295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[84203,87779,87646,84282,84318,101864,109431,110568,87223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[87883,102369,111451,102464],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905412"},{"annotations":[101920],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042308"},{"annotations":[103351],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[110590],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1900181"},{"annotations":[99798,87862,102266,112540,114785,97276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006607"},{"annotations":[103527],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905406"},{"annotations":[87011,98514,90517],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0042307"},{"annotations":[105755,91885,84116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[104429,86749,93486,94196,105461,102279,106527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[94632,105888,84527],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[95668,98819,101294,99412,103689,112899,84528,106002,103712,113348,95373,102286,103629,85710,93028,111348,87058,107922,90662,95558,96445],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[89595,88069,99799,102444,91908,111627,87112,111920,113363,111111,114786,103894,65579,110579,89538,85191,96541,101492,90430,101165,91122,100680,104589,106552,99126,90135,93973,109372,102690,111013,111946,92270,98681,99511,103048,85098,85603,98775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006606"},{"annotations":[62852,86396,92613,94375,107510,106170,101348,86599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[93101,99221,107974],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[113408,97430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[86591,91574,107511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[94197,106523,111213,110511,104518,108376,105462,94508,109967,97314,90974,94732,87809,100600,100897,102280,87396,104430,99643],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045048"},{"annotations":[103630,88925,103413,86561,103690,109322,95559,112389,84849,103713,99054],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[84987,109473,110814,97041,95139],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032979"},{"annotations":[110815],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[86541,87068,106171,106521,94721,103691,107916,94376,106531],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[103280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[102737,95845,96983,107852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070198"},{"annotations":[93124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"},{"annotations":[91666,96959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070973"},{"annotations":[94851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034067"},{"annotations":[109914,97457,97924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034501"},{"annotations":[87444,93016,110061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[87536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035372"},{"annotations":[106925,114728,88467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[86175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[102268,96542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036228"},{"annotations":[105315,98336,109315,104197,88448,101697],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[88274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006621"},{"annotations":[83840,94733,100601,94509,94561,108680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[94542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"},{"annotations":[86592,99222,86600,91575,93102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"},{"annotations":[100174,97248,86351,98260,85093,100194,93545,102855,88261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[114753,100032,104386,96517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[106017,113031,96645,92918,85321,85921,87141,94765,103624,105007,110219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[87782,106764,105499,86721,84321,84150,94104,102679,107585,88144,97018,87649,101082,110828,103490,88429,92113,105917,112511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"},{"annotations":[99454],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905634"},{"annotations":[97069,102493],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902542"},{"annotations":[112049,105756,86990,112764,90424,105879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[111248,87772,110488],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[104431,98707,102281,94198,105463,112050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"},{"annotations":[110249,84139,107123],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071816"},{"annotations":[108436,88350,92433,113624,107148,104181,114946,101827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070086"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":243,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00064":null,"SJAG_00065":null,"SJAG_00082":null,"SJAG_00093":null,"SJAG_00108":null,"SJAG_00175":null,"SJAG_00181":null,"SJAG_00196":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00229":null,"SJAG_00277":null,"SJAG_00279":null,"SJAG_00284":null,"SJAG_00326":null,"SJAG_00360":null,"SJAG_00364":null,"SJAG_00373":null,"SJAG_00375":null,"SJAG_00380":null,"SJAG_00383":null,"SJAG_00404":null,"SJAG_00416":null,"SJAG_00429":null,"SJAG_00471":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00586":null,"SJAG_00603":null,"SJAG_00640":null,"SJAG_00687":null,"SJAG_00702":null,"SJAG_00803":null,"SJAG_00821":null,"SJAG_00823":null,"SJAG_00840":null,"SJAG_00883":null,"SJAG_00891":null,"SJAG_00918":null,"SJAG_00959":null,"SJAG_00968":null,"SJAG_01001":null,"SJAG_01004":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01084":null,"SJAG_01088":null,"SJAG_01120":null,"SJAG_01127":null,"SJAG_01165":null,"SJAG_01178":null,"SJAG_01185":null,"SJAG_01211":null,"SJAG_01223":null,"SJAG_01224":null,"SJAG_01229":null,"SJAG_01240":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01282":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01328":null,"SJAG_01360":null,"SJAG_01371":null,"SJAG_01374":null,"SJAG_01378":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01449":null,"SJAG_01488":null,"SJAG_01496":null,"SJAG_01516":null,"SJAG_01546":null,"SJAG_01558":null,"SJAG_01560":null,"SJAG_01584":null,"SJAG_01586":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01621":null,"SJAG_01640":null,"SJAG_01655":null,"SJAG_01684":null,"SJAG_01686":null,"SJAG_01716":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01775":null,"SJAG_01780":null,"SJAG_01782":null,"SJAG_01789":null,"SJAG_01790":null,"SJAG_01825":null,"SJAG_01834":null,"SJAG_01840":null,"SJAG_01854":null,"SJAG_01879":null,"SJAG_01909":null,"SJAG_01917":null,"SJAG_01940":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_01981":null,"SJAG_01999":null,"SJAG_02034":null,"SJAG_02045":null,"SJAG_02065":null,"SJAG_02074":null,"SJAG_02077":null,"SJAG_02117":null,"SJAG_02208":null,"SJAG_02210":null,"SJAG_02228":null,"SJAG_02274":null,"SJAG_02330":null,"SJAG_02336":null,"SJAG_02354":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02425":null,"SJAG_02437":null,"SJAG_02456":null,"SJAG_02514":null,"SJAG_02520":null,"SJAG_02524":null,"SJAG_02529":null,"SJAG_02584":null,"SJAG_02588":null,"SJAG_02592":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_02757":null,"SJAG_02761":null,"SJAG_02789":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02831":null,"SJAG_02867":null,"SJAG_02912":null,"SJAG_02914":null,"SJAG_02917":null,"SJAG_02997":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03048":null,"SJAG_03244":null,"SJAG_03250":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03315":null,"SJAG_03324":null,"SJAG_03327":null,"SJAG_03358":null,"SJAG_03376":null,"SJAG_03385":null,"SJAG_03396":null,"SJAG_03404":null,"SJAG_03411":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03437":null,"SJAG_03440":null,"SJAG_03453":null,"SJAG_03470":null,"SJAG_03502":null,"SJAG_03508":null,"SJAG_03515":null,"SJAG_03540":null,"SJAG_03560":null,"SJAG_03591":null,"SJAG_03593":null,"SJAG_03633":null,"SJAG_03643":null,"SJAG_03648":null,"SJAG_03662":null,"SJAG_03684":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03737":null,"SJAG_03756":null,"SJAG_03781":null,"SJAG_03783":null,"SJAG_03865":null,"SJAG_03892":null,"SJAG_03907":null,"SJAG_03915":null,"SJAG_03930":null,"SJAG_03955":null,"SJAG_03959":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_03986":null,"SJAG_04014":null,"SJAG_04024":null,"SJAG_04051":null,"SJAG_04126":null,"SJAG_04129":null,"SJAG_04148":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04259":null,"SJAG_04294":null,"SJAG_04336":null,"SJAG_04349":null,"SJAG_04366":null,"SJAG_04411":null,"SJAG_04432":null,"SJAG_04455":null,"SJAG_04466":null,"SJAG_04468":null,"SJAG_04489":null,"SJAG_04533":null,"SJAG_04552":null,"SJAG_04641":null,"SJAG_04645":null,"SJAG_04684":null,"SJAG_04703":null,"SJAG_04763":null,"SJAG_04901":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_04996":null,"SJAG_05210":null,"SJAG_05220":null,"SJAG_05259":null,"SJAG_05266":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_05303":null,"SJAG_05315":null,"SJAG_05319":null,"SJAG_05414":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_07010":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to organelle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to organelle","type":"exact"},{"name":"protein localization in organelle","type":"exact"}],"termid":"GO:0033365","terms_by_termid":{"GO:0006606":null,"GO:0006607":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0006621":null,"GO:0006623":null,"GO:0006625":null,"GO:0006626":null,"GO:0006627":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0030150":null,"GO:0031204":null,"GO:0032979":null,"GO:0034067":null,"GO:0034501":null,"GO:0035372":null,"GO:0036228":null,"GO:0042307":null,"GO:0042308":null,"GO:0043328":null,"GO:0044379":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0045046":null,"GO:0045047":null,"GO:0045048":null,"GO:0051204":null,"GO:0061509":null,"GO:0070086":null,"GO:0070198":null,"GO:0070973":null,"GO:0071816":null,"GO:0120113":null,"GO:0140210":null,"GO:1900181":null,"GO:1902440":null,"GO:1902441":null,"GO:1902542":null,"GO:1902543":null,"GO:1904498":null,"GO:1904518":null,"GO:1905406":null,"GO:1905412":null,"GO:1905634":null,"GO:1990976":null}}


id: PBO:0079322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 12","termid":"PBO:0079322"}


id: PBO:0066077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 5","termid":"PBO:0066077"}


id: GO:0010571
data:
  {"annotated_genes":["SJAG_03160","SJAG_00364","SJAG_03720","SJAG_03695","SJAG_02074","SJAG_03048","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108159,113377,99453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[85242,98504,112358,102736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"positive regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA replication during S phase","type":"related"},{"name":"positive regulation of DNA replication involved in S phase","type":"exact"},{"name":"positive regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:0010571","terms_by_termid":{"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: SO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an mRNA with a frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"frameshift","termid":"SO:0000865"},{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_mRNA_with_frameshift","synonyms":[{"name":"gene with mRNA with frameshift","type":"exact"}],"termid":"SO:0000455"}


id: GO:1900870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tatiopterin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0042559","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tatiopterin biosynthetic process","synonyms":[{"name":"tatiopterin anabolism","type":"exact"},{"name":"tatiopterin biosynthesis","type":"exact"},{"name":"tatiopterin formation","type":"exact"},{"name":"tatiopterin synthesis","type":"exact"}],"termid":"GO:1900870"}


id: GO:1900599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of demethylkotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"demethylkotanin metabolic process","termid":"GO:1900597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"demethylkotanin biosynthetic process","synonyms":[{"name":"demethylkotanin anabolism","type":"exact"},{"name":"demethylkotanin biosynthesis","type":"exact"},{"name":"demethylkotanin formation","type":"exact"},{"name":"demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900599"}


id: GO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aspartate by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"aspartate secretion","termid":"GO:0061528"}


id: PBO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3","termid":"PBO:0043521"}


id: GO:1901909
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84902],"is_not":false,"summary":null,"term":"GO:1901909"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine hexaphosphate.","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate catabolic process","termid":"GO:0015961"},{"relation_name":"is_a","term_name":"diadenosine hexaphosphate metabolic process","termid":"GO:1901908"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine hexaphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine hexaphosphate catabolism","type":"exact"},{"name":"diadenosyl hexaphosphate breakdown","type":"exact"},{"name":"diadenosyl hexaphosphate catabolic process","type":"exact"},{"name":"diadenosyl hexaphosphate catabolism","type":"exact"},{"name":"diadenosyl hexaphosphate degradation","type":"exact"}],"termid":"GO:1901909","terms_by_termid":{"GO:1901909":null}}


id: GO:0050394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + viomycin = ADP + O-phosphoviomycin.","definition_xrefs":["MetaCyc:VIOMYCIN-KINASE-RXN","EC:2.7.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"viomycin kinase activity","secondary_identifiers":["RHEA:20509"],"synonyms":[{"name":"ATP:viomycin O-phosphotransferase activity","type":"related"},{"name":"capreomycin phosphotransferase activity","type":"related"},{"name":"viomycin phosphotransferase activity","type":"related"}],"termid":"GO:0050394"}


id: PBO:0083719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER quality-control lectin; integral subunit of the HRD ligase; participates in efficient ER retention of misfolded proteins by recognizing them and delivering them to Hrd1p; binds to glycans with terminal alpha-1,6 linked mannose on misfolded N-glycosylated proteins and participates in targeting proteins to ERAD; member of the OS-9 protein family","termid":"PBO:0083719"}


id: GO:0033979
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box H/ACA type small nucleolar RNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA sRNA metabolic process","type":"narrow"},{"name":"box H/ACA snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033979","terms_by_termid":{"GO:0000495":null}}


id: PBO:0003916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2B subunit","termid":"PBO:0003916"}


id: GO:0071174
data:
  {"annotated_genes":["SJAG_00883","SJAG_04884","SJAG_01330","SJAG_04699","SJAG_01082","SJAG_03353","SJAG_03681","SJAG_03126","SJAG_04126","SJAG_01837","SJAG_01679","SJAG_04259","SJAG_01297","SJAG_02169","SJAG_02451","SJAG_02336","SJAG_04999"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109908,110390,100022,112019,86888,95716,104373,103350,108081],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[95564,109912,102428,112793,97923,106033,111668,110619,86890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[90344],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112797],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90345],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint that originates from the spindle and delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and oriented, the completion of anaphase until chromosomes are attached to the spindle, or mitotic exit and cytokinesis when the spindle does not form.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072477"],"synonyms":[{"name":"mitotic cell cycle spindle checkpoint","type":"exact"},{"name":"mitotic spindle checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic spindle checkpoint","type":"exact"},{"name":"topo II checkpoint","type":"related"},{"name":"topoisomerase II checkpoint","type":"related"}],"termid":"GO:0071174","terms_by_termid":{"GO:0007094":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in vertebrate","termid":"PBO:0011430"}


id: PBO:0065073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 2","termid":"PBO:0065073"}


id: GO:0019467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ornithine by decarboxylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"ornithine catabolic process, by decarboxylation","secondary_identifiers":["MetaCyc:ORNDEG-PWY"],"synonyms":[{"name":"ornithine breakdown, by decarboxylation","type":"exact"},{"name":"ornithine degradation, by decarboxylation","type":"exact"}],"termid":"GO:0019467"}


id: PBO:0016971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair (predicted)","termid":"PBO:0016971"}


id: PBO:0004097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease I Exo1","termid":"PBO:0004097"}


id: PATO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000846 auditory threshold (obsolete PATO:0000846)","termid":"PATO:0000846"}


id: PR:O14179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome maturation protein SBDS that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01118","PANTHER:PTHR10927:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome maturation protein sdo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.03","secondary_identifiers":["UniProtKB:O14179"],"synonyms":[{"name":"Spom972h-SBDS","type":"exact"}],"termid":"PR:O14179"}


id: PBO:0047429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 rRNA-processing protein","termid":"PBO:0047429"}


id: GO:1990138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection extension","synonyms":[{"name":"neurite extension","type":"narrow"},{"name":"neuron process extension","type":"exact"},{"name":"neuron protrusion extension","type":"exact"},{"name":"neuronal cell projection extension","type":"exact"}],"termid":"GO:1990138"}


id: PBO:0034272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-attached_to_part_of","termid":"PBO:0034272"}


id: GO:1903497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 11-deoxycorticosterone stimulus.","definition_xrefs":["GO_REF:0000071","PMID:3585228","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to 11-deoxycorticosterone","termid":"GO:1903496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 11-deoxycorticosterone","termid":"GO:1903497"}


id: GO:0030753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + xanthotoxol = S-adenosyl-L-homocysteine + xanthotoxin. Xanthotoxol is also known as 8-hydroxyfuranocoumarin and xanthotoxin as 8-methoxyfuranocoumarin.","definition_xrefs":["EC:2.1.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"8-hydroxyfuranocoumarin 8-O-methyltransferase activity","secondary_identifiers":["GO:0030765","KEGG_REACTION:R02982"],"synonyms":[{"name":"S-adenosyl-L-methionine:8-hydroxyfuranocoumarin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:8-hydroxyfurocoumarin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:xanthotoxol O-methyltransferase activity","type":"related"},{"name":"XMT activity","type":"related"},{"name":"furanocoumarin 8-O-methyl-transferase activity","type":"related"},{"name":"furanocoumarin 8-methyltransferase activity","type":"related"},{"name":"xanthotoxol 8-O-methyltransferase activity","type":"related"},{"name":"xanthotoxol O-methyltransferase activity","type":"exact"},{"name":"xanthotoxol methyltransferase activity","type":"related"}],"termid":"GO:0030753"}


id: GO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When an aromatic family amino acid, phenylalanine, tyrosine, or tryptophan, is used as the substrate, 2-phenylethanoate, 4-hydroxyphenylethanoate, or 2-(Indol-3-yl)-ethanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000952"}


id: GO:0072590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-aspartate + L-glutamate = ADP + phosphate + N-acetylaspartyl-glutamate.","definition_xrefs":["PMID:20643647","PMID:20657015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-L-aspartate-L-glutamate ligase activity","secondary_identifiers":["Reactome:R-HSA-8942575"],"termid":"GO:0072590"}


id: PBO:0084240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p); phosphatidylethanolamine-binding protein (PEBP) family member and ortholog of hPEBP1/RKIP, a natural metastasis suppressor; targets to vacuolar membranes during stationary phase; acetylated by NatB N-terminal acetyltransferase; protein abundance increases in response to DNA replication stress","termid":"PBO:0084240"}


id: PBO:0049992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin interacting protein 1","termid":"PBO:0049992"}


id: PBO:0040571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 5","termid":"PBO:0040571"}


id: PBO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.1","termid":"PBO:0001253"}


id: GO:0141193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a signaling molecule binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:25614732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nuclear receptor-mediated signaling pathway","synonyms":[{"name":"nuclear receptor signaling pathway","type":"exact"}],"termid":"GO:0141193"}


id: GO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemoglobin biosynthetic process","synonyms":[{"name":"activation of hemoglobin biosynthetic process","type":"narrow"},{"name":"positive regulation of haemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"positive regulation of hemoglobin anabolism","type":"exact"},{"name":"positive regulation of hemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of hemoglobin formation","type":"exact"},{"name":"positive regulation of hemoglobin synthesis","type":"exact"},{"name":"stimulation of hemoglobin biosynthetic process","type":"narrow"},{"name":"up regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"up-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"upregulation of hemoglobin biosynthetic process","type":"exact"}],"termid":"GO:0046985"}


id: GO:0052790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chitooligosaccharide with N-acetylglucosamine at nonreducing terminal + H2O = chitooligosaccharide with glucosamine at nonreducing terminal + acetate. This reaction is the deacetylation of a chitooligosaccharide at the nonreducing N-acetylglucosamine residue; chitooligosaccharide are composed of (1->4)-linked D-glucosamine (GlcN) and N-acetyl-D-glucosamine (GlcNAc) in varying proportions.","definition_xrefs":["PMID:8986807","PMID:8421697","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0019213","GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"chitooligosaccharide deacetylase activity","termid":"GO:0052790"}


id: PBO:0062608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 3 pseudogene","termid":"PBO:0062608"}


id: GO:0102157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-sulfopropanediol(1-) + NAD = 2-oxo-3-hydroxy-propane-1-sulfonate + NADH + H+.","definition_xrefs":["GOC:pz","PMID:20150239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R)-sulfopropanediol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11729"],"termid":"GO:0102157"}


id: PBO:0063375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCYT1B antisense RNA 1","termid":"PBO:0063375"}


id: GO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds by phosphorylation of sucrose to form sucrose-6-phosphate. The subsequent actions of a hydrolase and a fructokinase generate fructose-6-phosphate and glucose-6-phosphate.","definition_xrefs":["GOC:bf","GOC:dgf","MetaCyc:SUCUTIL-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate and glucose-6-phosphate","termid":"GO:0036008"}


id: PBO:0074290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 5","termid":"PBO:0074290"}


id: PATO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location with oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process to oxygen","termid":"PATO:0001458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic (for occurrence)","termid":"PATO:0001459"}


id: PBO:0038595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase medium chain","termid":"PBO:0038595"}


id: GO:0043175
data:
  {"annotated_genes":["SJAG_02203","SJAG_01610","SJAG_01744","SJAG_04933","SJAG_03118","SJAG_04353","SJAG_02691","SJAG_01707","SJAG_00448","SJAG_01151","SJAG_00139","SJAG_00483","SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66477],"is_not":false,"summary":null,"term":"GO:0043175"},{"annotations":[70597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[64364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[71519,76931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[70003,77604,77588,71239,75214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[75488,77323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[72742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase core enzyme, containing a specific subunit composition defined as the core enzyme.","definition_xrefs":["GOC:jl","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase binding","termid":"GO:0070063"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01744":null,"SJAG_02203":null,"SJAG_02691":null,"SJAG_02898":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase core enzyme binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0043175","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0001139":null,"GO:0043175":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0043888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone binding protein","termid":"PBO:0043888"}


id: GO:0015854
data:
  {"annotated_genes":["SJAG_00760","SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[111268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"}]},"cv_name":"biological_process","definition":"The directed movement of guanine, 2-amino-6-hydroxypurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"guanine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015854","terms_by_termid":{"GO:0098710":null,"GO:0140140":null}}


id: GO:0033195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkyl hydroperoxide stimulus. Alkyl hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH, where the substituent is an alkyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroperoxide","termid":"GO:0033194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkyl hydroperoxide","termid":"GO:0033195"}


id: PBO:0041179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A1","termid":"PBO:0041179"}


id: GO:0097711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The docking of a cytosolic centriole/basal body to the plasma membrane via the ciliary transition fibers. In some species this may happen via an intermediate step, by first docking to the ciliary vesicle via the ciliary transition fibers. The basal body-ciliary vesicle then relocates to the plasma membrane, followed by the ciliary vesicle fusing with the plasma membrane, effectively attaching the basal body to the plasma membrane.","definition_xrefs":["PMID:23348840","PMID:13978319","GOC:cilia","PMID:25686250","PMID:23530209","PMID:26981235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0140056","GO:0044085"],"is_obsolete":false,"name":"ciliary basal body-plasma membrane docking","synonyms":[{"name":"anchoring of the basal body to the plasma membrane","type":"related"},{"name":"ciliary basal body docking","type":"exact"}],"termid":"GO:0097711"}


id: GO:1902327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication DNA ligation","termid":"GO:1902291"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"bacterial-type DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902327"}


id: PBO:0067314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 400, pseudogene","termid":"PBO:0067314"}


id: PBO:0079717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 4","termid":"PBO:0079717"}


id: PBO:0072788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 3, pseudogene","termid":"PBO:0072788"}


id: PR:Q9USV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf7 gene.","definition_xrefs":["UniProtKB:Q9USV3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.04c","synonyms":[{"name":"Spom972h-cwf7","type":"exact"},{"name":"complexed with cdc5 protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"splicing factor 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV3"}


id: GO:0008197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete yolk protein (obsolete GO:0008197)","synonyms":[{"name":"yolk protein","type":"exact"}],"termid":"GO:0008197"}


id: GO:1901480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oleate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:19493158","RHEA:33655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"oleate transmembrane transporter activity","synonyms":[{"name":"oleate transporter activity","type":"related"}],"termid":"GO:1901480"}


id: PBO:0040463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A4 antisense RNA 1","termid":"PBO:0040463"}


id: RO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s 'determined by part of' w if and only if there exists some f such that (1) s 'determined by' f and (2) f part_of w, or f=w.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determined_by_part_of","termid":"RO:0002509"}


id: FYPO:0004614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, is abnormal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule growth","type":"exact"},{"name":"abnormal microtubule polymerisation","type":"exact"},{"name":"abnormal microtubule polymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule rescue","type":"related"}],"termid":"FYPO:0004614"}


id: PBO:0054076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1426","termid":"PBO:0054076"}


id: PR:O60105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylosuccinate lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.09c","secondary_identifiers":["UniProtKB:O60105"],"synonyms":[{"name":"ASL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ASase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Adenylosuccinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ADSL","type":"exact"}],"termid":"PR:O60105"}


id: PBO:0040747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1, pseudogene 2","termid":"PBO:0040747"}


id: PBO:0083552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene CSE1","termid":"PBO:0083552"}


id: PBO:0085018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinamide mononucleotide-specific adenylyltransferase (NMNAT); catalyzes the conversion of nicotinamide mononucleotide (NMN) to nicotinamide adenine dinucleotide (NAD+); role in the nicotinamide riboside (NR) salvage pathway of NAD+ biosynthesis; involved in NR and NAD+ homeostasis; ATPase involved in protein quality control and filamentation pathways; interacts physically with Kss1p and suppresses the filamentation defect of a kss1 deletion","termid":"PBO:0085018"}


id: GO:1902797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of snoRNA processing","termid":"GO:1902796"},{"relation_name":"is_a","term_name":"negative regulation of snoRNA metabolic process","termid":"GO:1903324"},{"relation_name":"negatively_regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"negatively_regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of snoRNA processing","synonyms":[{"name":"down regulation of snoRNA processing","type":"exact"},{"name":"down-regulation of snoRNA processing","type":"exact"},{"name":"downregulation of snoRNA processing","type":"exact"},{"name":"inhibition of snoRNA processing","type":"narrow"}],"termid":"GO:1902797"}


id: GO:0045647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"negatively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte differentiation","synonyms":[{"name":"down regulation of erythrocyte differentiation","type":"exact"},{"name":"down-regulation of erythrocyte differentiation","type":"exact"},{"name":"downregulation of erythrocyte differentiation","type":"exact"},{"name":"inhibition of erythrocyte differentiation","type":"narrow"},{"name":"negative regulation of RBC differentiation","type":"exact"},{"name":"negative regulation of red blood cell differentiation","type":"exact"}],"termid":"GO:0045647"}


id: PBO:0026878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_cell,_septa_grouped","termid":"PBO:0026878"}


id: PBO:0055414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2844","termid":"PBO:0055414"}


id: PR:O59808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atd3 gene.","definition_xrefs":["UniProtKB:O59808","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine aldehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.10","synonyms":[{"name":"BADH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atd3","type":"exact"},{"name":"meiotic expression up-regulated protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59808"}


id: PBO:0080522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 4, pseudogene","termid":"PBO:0080522"}


id: PBO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ace2","termid":"PBO:0004374"}


id: GO:0140797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 17)= histone H3 L-citrullyl (position 17) + NH4+, resulting in histone H3 citrullination at position 17.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"histone H3R17 arginine deiminase activity","synonyms":[{"name":"H3-R17 citrullination","type":"exact"},{"name":"histone H3-R17 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R17 specific)","type":"exact"}],"termid":"GO:0140797"}


id: PBO:0062361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily U member 2 pseudogene","termid":"PBO:0062361"}


id: PBO:0069512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 781, pseudogene","termid":"PBO:0069512"}


id: GO:0102989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 H+ + 9,12,15-cis-hexadecatrienoyl-CoA + 3 malonyl-CoA(5-) = 5-(pentadeca-8,11,14-trien-1-yl)resorcinol + 4 coenzyme A + 4 carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"5-pentadecatrienylresorcinol synthase activity","secondary_identifiers":["MetaCyc:RXN-9618"],"termid":"GO:0102989"}


id: GO:1905276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GOC:TermGenie","PMID:25745997","GO_REF:0000058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial tube formation","termid":"GO:1905276"}


id: PBO:0057325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519e","termid":"PBO:0057325"}


id: SO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-palindromic sequence found in the promoters of genes whose expression is regulated in response to androgen.","definition_xrefs":["PMID:21796522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen_response_element","synonyms":[{"name":"ARE","type":"exact"},{"name":"androgen response element","type":"exact"}],"termid":"SO:0001853"}


id: PBO:0054402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1798","termid":"PBO:0054402"}


id: GO:0015573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-glucosides from one side of a membrane to the other. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729","PMID:7883710","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"beta-glucoside transmembrane transporter activity","secondary_identifiers":["GO:0015582"],"synonyms":[{"name":"beta-glucoside permease activity","type":"exact"}],"termid":"GO:0015573"}


id: FYPO:0004947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cardiolipin measured in membranes that form the mitochondrial envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular cardiolipin level","termid":"FYPO:0005590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial membrane cardiolipin level","synonyms":[{"name":"normal level of cardiolipin in mitochondrial membrane","type":"exact"},{"name":"normal mitochondrial cardiolipin level","type":"exact"},{"name":"normal mitochondrial envelope cardiolipin level","type":"related"},{"name":"normal mitochondrial membrane cardiolipin level during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial membrane cardiolipin level during vegetative growth","type":"exact"}],"termid":"FYPO:0004947"}


id: PBO:0079160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN18 antisense RNA 1","termid":"PBO:0079160"}


id: PBO:0031793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_cell_cycle_phase_transition","termid":"PBO:0031793"}


id: PBO:0058769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6893","termid":"PBO:0058769"}


id: PATO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000541 photosensitivity value (obsolete PATO:0000541)","termid":"PATO:0000541"}


id: PBO:0031221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vesicle-mediated_transport_during_vegetative_growth","termid":"PBO:0031221"}


id: GO:2000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000713)","synonyms":[{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000713"}


id: GO:1990713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that negatively regulates apoptotic processes. In human, this anti-apoptotic complex is a homodimer of BIRC5 (survivin) and provides one survivin molecule to the chromosomal passenger complex (CPC).","definition_xrefs":["GOC:bhm","PMID:10949038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"survivin complex","synonyms":[{"name":"Baculoviral IAP repeat-containing protein 5 complex","type":"exact"},{"name":"survivin homodimer complex","type":"narrow"}],"termid":"GO:1990713"}


id: PR:Q9USS8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USS8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.02c","synonyms":[{"name":"Spom972h-SPBC4.02c","type":"exact"}],"termid":"PR:Q9USS8"}


id: PBO:0070026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1323, pseudogene","termid":"PBO:0070026"}


id: PBO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Mca1 (predicted)","termid":"PBO:0013780"}


id: SO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: FYPO:0003235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K9 methylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K9me at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003235"}


id: GO:0051195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cofactor metabolic process (obsolete GO:0051195)","synonyms":[{"name":"down regulation of cofactor metabolic process","type":"exact"},{"name":"down-regulation of cofactor metabolic process","type":"exact"},{"name":"downregulation of cofactor metabolic process","type":"exact"},{"name":"inhibition of cofactor metabolic process","type":"narrow"},{"name":"negative regulation of cofactor metabolism","type":"exact"}],"termid":"GO:0051195"}


id: GO:0015090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Fe2+(out) = Fe2+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:9.A.9.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low-affinity ferric iron ion transmembrane transporter activity","synonyms":[{"name":"low affinity iron ion transmembrane transporter activity","type":"exact"},{"name":"low affinity iron transporter activity","type":"exact"}],"termid":"GO:0015090"}


id: PBO:0050396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 1","termid":"PBO:0050396"}


id: GO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sister chromosomes from the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during meiosis II.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"sister chromosome movement towards spindle pole involved in meiotic sister chromatid segregation","synonyms":[{"name":"meiosis II, sister chromosome movement towards spindle pole","type":"exact"},{"name":"sister chromosome movement towards spindle pole during meiosis II","type":"related"}],"termid":"GO:0051759"}


id: GO:1990672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a medial-Golgi-derived vesicle to the lipid bilayer membrane around the Golgi trans cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"medial-Golgi-derived vesicle fusion with Golgi trans cisterna membrane","termid":"GO:1990672"}


id: FYPO:0002993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002993"}


id: PBO:0041980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 24","termid":"PBO:0041980"}


id: PR:Q9UTF6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 5A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.04","secondary_identifiers":["UniProtKB:Q9UTF6"],"synonyms":[{"name":"Spom972h-COX5A","type":"exact"},{"name":"cytochrome c oxidase polypeptide VI (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF6"}


id: GO:0004176
data:
  {"annotated_genes":["SJAG_00984","SJAG_01816","SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89407,107118,114820],"is_not":false,"summary":null,"term":"GO:0004176"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0140096","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ATP-dependent peptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9698929","Reactome:R-HSA-9838081","Reactome:R-HSA-9838289","Reactome:R-HSA-9839059","Reactome:R-HSA-9839105","Reactome:R-HSA-9839146","GO:0004280","Reactome:R-HSA-9838004","Reactome:R-HSA-9839113","Reactome:R-HSA-9839751"],"synonyms":[{"name":"ATP-dependent proteolysis","type":"related"}],"termid":"GO:0004176","terms_by_termid":{"GO:0004176":null}}


id: FYPO:0000634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to centromere during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromere during vegetative growth","type":"exact"},{"name":"abolished protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"protein absent from centromere during vegetative growth","type":"related"},{"name":"protein localization to centromere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000634"}


id: FYPO:0002364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetylation during vegetative growth","termid":"FYPO:0000456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H4 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H4 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002364"}


id: PBO:0029952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_sister_chromatid_separation","termid":"PBO:0029952"}


id: PBO:0066742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 39","termid":"PBO:0066742"}


id: GO:0035112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of genitalia are generated and organized. The genitalia are the organs of reproduction or generation, external and internal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"genitalia development","termid":"GO:0048806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genitalia morphogenesis","synonyms":[{"name":"genital morphogenesis","type":"related"}],"termid":"GO:0035112"}


id: GO:1901425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formic acid stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formic acid","termid":"GO:1901425"}


id: GO:1905694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:23767959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of phosphatidic acid biosynthetic process","termid":"GO:1905693"},{"relation_name":"negatively_regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"down regulation of phosphatidic acid anabolism","type":"exact"},{"name":"down regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"down regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidic acid formation","type":"exact"},{"name":"down regulation of phosphatidic acid synthesis","type":"exact"},{"name":"down-regulation of phosphatidic acid anabolism","type":"exact"},{"name":"down-regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidic acid formation","type":"exact"},{"name":"down-regulation of phosphatidic acid synthesis","type":"exact"},{"name":"downregulation of phosphatidic acid anabolism","type":"exact"},{"name":"downregulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"downregulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidic acid formation","type":"exact"},{"name":"downregulation of phosphatidic acid synthesis","type":"exact"},{"name":"inhibition of phosphatidic acid anabolism","type":"narrow"},{"name":"inhibition of phosphatidic acid biosynthesis","type":"narrow"},{"name":"inhibition of phosphatidic acid biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidic acid formation","type":"narrow"},{"name":"inhibition of phosphatidic acid synthesis","type":"narrow"},{"name":"negative regulation of phosphatidic acid anabolism","type":"exact"},{"name":"negative regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidic acid formation","type":"exact"},{"name":"negative regulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905694"}


id: PR:000025005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm3 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm3","pombase_gene_id":"SPBPJ4664.03","synonyms":[{"name":"mfm3","type":"exact"}],"termid":"PR:000025005"}


id: PBO:0069381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 641, pseudogene","termid":"PBO:0069381"}


id: SO:0000520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VDJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VDJ_C_cluster","synonyms":[{"name":"V VDJ C cluster","type":"exact"},{"name":"V-(VDJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000520"}


id: SO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that is segregating in one or more natural populations of a species.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allele","termid":"SO:0001023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_sequence_variant","synonyms":[{"name":"polymorphic sequence variant","type":"exact"}],"termid":"SO:0001025"}


id: GO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of a B cell receptor from the plasma membrane to the inside of the cell.","definition_xrefs":["GOC:add","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"B cell receptor internalization","synonyms":[{"name":"B cell receptor uptake of antigen","type":"narrow"},{"name":"BCR endocytosis","type":"exact"},{"name":"BCR receptor internalization","type":"exact"}],"termid":"GO:0036300"}


id: FYPO:0004398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylarsine oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to phenylarsine oxide","synonyms":[{"name":"resistance to phenylarsine oxide during mitotic cell cycle","type":"related"},{"name":"resistance to phenylarsine oxide during vegetative growth","type":"exact"},{"name":"resistant to phenylarsine oxide","type":"exact"}],"termid":"FYPO:0004398"}


id: PBO:0044164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin 2, pseudogene","termid":"PBO:0044164"}


id: GO:0042752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian rhythm","termid":"GO:0042752"}


id: GO:0071506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycophenolic acid stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to mycophenolic acid","termid":"GO:0071505"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mycophenolic acid","synonyms":[{"name":"cellular response to mycophenolate","type":"exact"}],"termid":"GO:0071506"}


id: PBO:0079268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC39A antisense RNA 1","termid":"PBO:0079268"}


id: PR:Q9Y7T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04469","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C63.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.03","secondary_identifiers":["UniProtKB:Q9Y7T0"],"synonyms":[{"name":"Spom972h-DNAJC11","type":"exact"}],"termid":"PR:Q9Y7T0"}


id: FYPO:0002945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is in G0 phase is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during G0","synonyms":[{"name":"increased RNA accumulation during G0","type":"related"},{"name":"increased RNA level during cell quiescence","type":"exact"},{"name":"increased RNA level during quiescence","type":"exact"},{"name":"increased transcript level during G0","type":"exact"}],"termid":"FYPO:0002945"}


id: PBO:0038917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 1","termid":"PBO:0038917"}


id: PBO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.52","termid":"PBO:0000201"}


id: GO:0003780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with two actin filaments to anchor them together.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cross-linking activity (obsolete GO:0003780)","synonyms":[{"name":"actin cross-linking activity","type":"exact"}],"termid":"GO:0003780"}


id: PBO:0081133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP14 zinc finger protein","termid":"PBO:0081133"}


id: GO:0031853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nociceptin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nociceptin receptor binding","synonyms":[{"name":"nociceptin receptor ligand","type":"narrow"}],"termid":"GO:0031853"}


id: PBO:0086235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with the CCT complex to stimulate actin folding; has similarity to phosducins; null mutant lethality is complemented by mouse phosducin-like protein MgcPhLP; CCT is short for chaperonin containing TCP-1; essential gene","termid":"PBO:0086235"}


id: FYPO:0000512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of karyogamy involved in conjugation with cellular fusion is decreased.","gene_count":0,"genotype_count":0,"name":"obsolete decreased nuclear fusion during mating (obsolete FYPO:0000512)","termid":"FYPO:0000512"}


id: PBO:0015703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane transmembrane transport regulator (predicted)","termid":"PBO:0015703"}


id: PBO:0084765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase with a role in splicing; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084765"}


id: PBO:0055525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2959","termid":"PBO:0055525"}


id: GO:1902236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:rl","GOC:mtg_apoptosis","GOC:BHF","GOC:TermGenie","PMID:20160352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"is_a","term_name":"negative regulation of response to endoplasmic reticulum stress","termid":"GO:1903573"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of ER stress-induced apoptosis","type":"exact"},{"name":"down regulation of apoptosis in response to ER stress","type":"exact"},{"name":"down regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"down regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress-induced apoptosis","type":"exact"},{"name":"down-regulation of apoptosis in response to ER stress","type":"exact"},{"name":"down-regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"down-regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress-induced apoptosis","type":"exact"},{"name":"downregulation of apoptosis in response to ER stress","type":"exact"},{"name":"downregulation of apoptosis triggered by ER stress","type":"exact"},{"name":"downregulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress-induced apoptosis","type":"narrow"},{"name":"inhibition of apoptosis in response to ER stress","type":"narrow"},{"name":"inhibition of apoptosis triggered by ER stress","type":"narrow"},{"name":"inhibition of endoplasmic reticulum stress-induced apoptosis","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress-induced apoptosis","type":"exact"},{"name":"negative regulation of apoptosis in response to ER stress","type":"exact"},{"name":"negative regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"negative regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902236"}


id: PBO:0072476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 5","termid":"PBO:0072476"}


id: PBO:0085740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription termination by RNA polymerase II; interacts with exonuclease Rat1p and Rai1p; has an RPR domain (carboxy-terminal domain interacting domain); also involved in regulation of Ty1 transposition","termid":"PBO:0085740"}


id: PATO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female fertility","termid":"PATO:0000277"}


id: GO:0051612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of serotonin uptake","termid":"GO:0051611"},{"relation_name":"negatively_regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of serotonin uptake","synonyms":[{"name":"down regulation of serotonin uptake","type":"exact"},{"name":"down-regulation of serotonin uptake","type":"exact"},{"name":"downregulation of serotonin uptake","type":"exact"},{"name":"negative regulation of 5-HT uptake","type":"exact"},{"name":"negative regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"negative regulation of 5HT uptake","type":"exact"},{"name":"negative regulation of serotonin import","type":"exact"}],"termid":"GO:0051612"}


id: GO:1903849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","PMID:22269326","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aorta morphogenesis","termid":"GO:1903847"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aorta morphogenesis","synonyms":[{"name":"activation of aorta morphogenesis","type":"narrow"},{"name":"up regulation of aorta morphogenesis","type":"exact"},{"name":"up-regulation of aorta morphogenesis","type":"exact"},{"name":"upregulation of aorta morphogenesis","type":"exact"}],"termid":"GO:1903849"}


id: PBO:0066835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 134","termid":"PBO:0066835"}


id: GO:0106135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell contraction.","definition_xrefs":["PMID:19525381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle contraction","termid":"GO:0055118"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"}


id: PATO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is between 90 degrees and 180 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obtuse angle to","termid":"PATO:0001052"}


id: PBO:0043044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 1","termid":"PBO:0043044"}


id: GO:0060335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of response to type II interferon","termid":"GO:0060332"},{"relation_name":"is_a","term_name":"regulation of type II interferon-mediated signaling pathway","termid":"GO:0060334"},{"relation_name":"positively_regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of type II interferon-mediated signaling pathway","synonyms":[{"name":"positive regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"positive regulation of immune interferon-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interferon-gamma-mediated signaling pathway","type":"broad"},{"name":"positive regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"positive regulation of type II IFN-mediated pathway","type":"broad"}],"termid":"GO:0060335"}


id: PBO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: PR:Q9Y7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp15 gene.","definition_xrefs":["UniProtKB:Q9Y7Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L15, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.01c","synonyms":[{"name":"Spom972h-mrp15","type":"exact"}],"termid":"PR:Q9Y7Z7"}


id: PBO:0061003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS actin remodeling regulator","termid":"PBO:0061003"}


id: SO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a mitochondria.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_chromosome","synonyms":[{"name":"mitochondrial chromosome","type":"exact"}],"termid":"SO:0000819"}


id: FYPO:0001101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased protein level during cellular response to H2O2","type":"exact"},{"name":"decreased protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001101"}


id: PBO:0064817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 10","termid":"PBO:0064817"}


id: PBO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (predicted)","termid":"PBO:0000825"}


id: GO:1902959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24577224","GOC:sjp","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"is_a","term_name":"regulation of aspartic-type peptidase activity","termid":"GO:1905245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902959"}


id: GO:0015760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucose-6-phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"hexose phosphate transport","termid":"GO:0015712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glucose-6-phosphate transport","termid":"GO:0015760"}


id: PBO:0089410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transmembrane transporter","termid":"PBO:0089410"}


id: PBO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 pseudogene 1","termid":"PBO:0045051"}


id: PBO:0063384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 4","termid":"PBO:0063384"}


id: GO:0048570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the notochord are generated and organized. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"part_of","term_name":"notochord development","termid":"GO:0030903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord morphogenesis","termid":"GO:0048570"}


id: PBO:0056512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBNL1 antisense RNA 1","termid":"PBO:0056512"}


id: GO:0032931
data:
  {"annotated_genes":["SJAG_01204"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105451,105452],"is_not":false,"summary":null,"term":"GO:0032931"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 56) = CoA + histone H3 N6-acetyl-L-lysine (position 56).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0034212","GO:0140096","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"histone H3K56 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K56 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K56 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0032931","terms_by_termid":{"GO:0032931":null}}


id: PBO:0040260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 13","termid":"PBO:0040260"}


id: SO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of nucleotide bases in tRNA. It contains several dihydrouracil residues.","definition_xrefs":["ISBN:071671920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHU_loop","synonyms":[{"name":"D loop","type":"related"},{"name":"DHU loop","type":"exact"}],"termid":"SO:0001176"}


id: PBO:0044275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 16","termid":"PBO:0044275"}


id: GO:0140808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosyl-[protein] + NAD+ = H+ + nicotinamide + O-(ADP-D-ribosyl)-L-tyrosyl-[protein].","definition_xrefs":["RHEA:58236","PMID:30257210","PMID:29954836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-tyrosine ADP-ribosyltransferase activity","termid":"GO:0140808"}


id: PBO:0073939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member A2","termid":"PBO:0073939"}


id: GO:0098963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport of ribonucleoprotein complex","termid":"GO:0098961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dendritic transport of messenger ribonucleoprotein complex","synonyms":[{"name":"dendritic transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0098963"}


id: PBO:0090897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, ubiquitin-protein ligase E4 Prp19","termid":"PBO:0090897"}


id: PBO:0110381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGAE pseudogene 1","termid":"PBO:0110381"}


id: PR:Q09805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00316","PRO:DNx","PANTHER:PTHR11679:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.03c","secondary_identifiers":["UniProtKB:Q09805"],"synonyms":[{"name":"Spom972h-VPS45","type":"exact"}],"termid":"PR:Q09805"}


id: PBO:0082923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c oxidase subunit; has a role in assembly of respiratory supercomplexes; similar to Rcf1p, and either Rcf1p or Rcf2p is required for late-stage assembly of the Cox12p and Cox13p subunits and for cytochrome c oxidase activity; associates with the cytochrome c oxidase - cytochrome bc1 supercomplex; null mutant accumulates reactive oxygen species; member of the conserved hypoxia induced gene family; C. elegans homolog is functional in yeast","termid":"PBO:0082923"}


id: PBO:0046658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial cell specific molecule 1","termid":"PBO:0046658"}


id: PBO:0040474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attractin like 1","termid":"PBO:0040474"}


id: GO:1903555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"regulation of TNF superfamily production","type":"related"},{"name":"regulation of TNFSF cytokine production","type":"exact"}],"termid":"GO:1903555"}


id: GO:0034632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of retinol from one side of a membrane to the other. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"retinol transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2466802","Reactome:R-HSA-1467466","Reactome:R-HSA-2466749"],"synonyms":[{"name":"retinol transporter activity","type":"related"},{"name":"vitamin A1 transporter activity","type":"exact"}],"termid":"GO:0034632"}


id: PBO:0083689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoyl reductase; catalyzes last step in each cycle of very long chain fatty acid elongation; localizes to ER, highly enriched in a structure marking nuclear-vacuolar junctions; coimmunoprecipitates with elongases Elo2p and Elo3p; protein increases in abundance and relative distribution to ER foci increases upon DNA replication stress; human homolog TECR implicated in nonsyndromic mental retardation, can complement yeast mutant","termid":"PBO:0083689"}


id: GO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein kinase A signaling. PKA signaling is the series of reactions, mediated by the intracellular serine/threonine kinase protein kinase A, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase A signaling","termid":"GO:0010737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of protein kinase A signaling","synonyms":[{"name":"regulation of PKA signaling cascade","type":"related"},{"name":"regulation of protein kinase A signaling cascade","type":"related"},{"name":"regulation of protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010738"}


id: GO:1904740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A transcription from RNA polymerase II promoter that results in positive regulation of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:rn","PMID:26448198","GOC:TermGenie","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter (obsolete GO:1904740)","synonyms":[{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by RNA polymerase II transcription factor activity","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by general transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from Pol II promoter","type":"exact"}],"termid":"GO:1904740"}


id: PBO:0047600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHIP1A divergent transcript","termid":"PBO:0047600"}


id: FYPO:0004618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable astral microtubules.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"astral microtubules absent from cell","synonyms":[{"name":"absent astral microtubules","type":"exact"},{"name":"astral microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"astral microtubules absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic astral microtubules absent from cell","type":"exact"}],"termid":"FYPO:0004618"}


id: FYPO:0005097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested during G1 phase. Arrest may either occur under conditions where arrest is not a normal occurrence, or may progress differently from normal under conditions where arrest normally does take place.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic G1 phase","termid":"FYPO:0000445"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in G1 phase","type":"exact"}],"termid":"FYPO:0005097"}


id: PBO:0052143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel interacting protein 1","termid":"PBO:0052143"}


id: GO:0062055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.","definition_xrefs":["PMID:29967049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic state transition","termid":"GO:0062055"}


id: GO:0047531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + ornithine = 5-amino-2-oxopentanoate + L-glutamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-diaminovalerate transaminase activity (obsolete GO:0047531)","synonyms":[{"name":"2,5-diaminovalerate aminotransferase activity","type":"exact"}],"termid":"GO:0047531"}


id: PBO:0051517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 beta","termid":"PBO:0051517"}


id: GO:0102173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylenecycloartanol + NADH + O2 + H+ = 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"24-methylenecycloartanol 4alpha-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11926","RHEA:58836"],"termid":"GO:0102173"}


id: PR:O94467
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC23G7.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase C23G7.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.10c","synonyms":[{"name":"Old yellow enzyme homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC23G7.10c","type":"exact"}],"termid":"PR:O94467"}


id: FYPO:0001167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ATPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ATPase activity","termid":"FYPO:0001167"}


id: PBO:0088060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase (E3); controls septin dynamics, spindle position checkpoint (SPOC) with ligase Dma2p by regulating recruitment of Elm1p to bud neck; regulates levels of eIF2 subunit Gcd11p, as well as abundance, localization, and ubiquitination of Cdk inhibitory kinase Swe1p; ubiquitinates cyclin Pcl1p; ortholog of human RNF8, similar to human Chfr; contains FHA, RING fingers; DMA1 has a paralog, DMA2, that arose from the whole genome duplication","termid":"PBO:0088060"}


id: GO:0071701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of a MAP kinase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAPK export from nucleus (obsolete GO:0071701)","synonyms":[{"name":"regulation of MAPK export from cell nucleus","type":"exact"},{"name":"regulation of MAPK export out of nucleus","type":"exact"},{"name":"regulation of MAPK transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of MAPK-nucleus export","type":"exact"},{"name":"regulation of cytoplasmic translocation of MAP kinase","type":"exact"},{"name":"regulation of cytoplasmic translocation of mitogen-activated protein kinase","type":"exact"}],"termid":"GO:0071701"}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: PBO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit (predicted)","termid":"PBO:0001501"}


id: GO:0016471
data:
  {"annotated_genes":["SJAG_01913","SJAG_03406","SJAG_04015","SJAG_01817","SJAG_05294","SJAG_01447","SJAG_00136","SJAG_00516","SJAG_00212","SJAG_01471","SJAG_01397","SJAG_04955","SJAG_02023","SJAG_02782"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88195,96062,86017,86330,91802,100037],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[95046,84228,114809,98793,96138,92753,105995,97761],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen.","definition_xrefs":["PMID:16449553","GOC:mah","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005773"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0016471","terms_by_termid":{"GO:0000220":null,"GO:0000221":null}}


id: PBO:0086368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative amidase","termid":"PBO:0086368"}


id: PBO:0059364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A pseudogene 1","termid":"PBO:0059364"}


id: PR:Q9Y7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18A7.02c gene.","definition_xrefs":["UniProtKB:Q9Y7Y9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18A7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18A7.02c","synonyms":[{"name":"Spom972h-SPBC18A7.02c","type":"exact"}],"termid":"PR:Q9Y7Y9"}


id: PBO:0027457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_at_cell_tip_during_cellular_response_to_reactive_oxygen_species","termid":"PBO:0027457"}


id: GO:0031273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pseudopodium assembly","termid":"GO:0031272"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"negatively_regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of pseudopodium assembly","synonyms":[{"name":"down regulation of pseudopodium formation","type":"related"},{"name":"down-regulation of pseudopodium formation","type":"related"},{"name":"downregulation of pseudopodium formation","type":"related"},{"name":"inhibition of pseudopodium formation","type":"narrow"},{"name":"negative regulation of pseudopodium formation","type":"related"}],"termid":"GO:0031273"}


id: GO:0021916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Short range signaling between cells of the paraxial mesoderm and motor neuron precursors in the spinal cord that specifies the fate of the motor column neuron precursors along the anterior-posterior axis.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"},{"relation_name":"part_of","term_name":"somatic motor neuron fate commitment","termid":"GO:0021917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive cell-cell signaling between paraxial mesoderm and motor neuron precursors","synonyms":[{"name":"inductive cell-cell signalling between paraxial mesoderm and motor neuron precursors","type":"exact"}],"termid":"GO:0021916"}


id: GO:0031621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of fever generation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"is_a","term_name":"negative regulation of heat generation","termid":"GO:0031651"},{"relation_name":"negatively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fever generation","synonyms":[{"name":"down regulation of fever","type":"exact"},{"name":"down-regulation of fever","type":"exact"},{"name":"downregulation of fever","type":"exact"},{"name":"inhibition of fever","type":"narrow"},{"name":"negative regulation of pyrexia","type":"exact"}],"termid":"GO:0031621"}


id: SO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"rRNA is an RNA component of a ribosome that can provide both structural scaffolding and catalytic activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_primary_transcript","termid":"SO:0000209"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/RRNA"],"synonyms":[{"name":"INSDC_feature:rRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"ribosomal RNA","type":"exact"},{"name":"ribosomal ribonucleic acid","type":"exact"}],"termid":"SO:0000252"}


id: PBO:0064926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit pseudogene","termid":"PBO:0064926"}


id: GO:0052442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052442)","synonyms":[{"name":"modulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"},{"name":"modulation of defense-related symbiont JA-mediated signal transduction pathway by organism","type":"exact"}],"termid":"GO:0052442"}


id: GO:0010926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structure is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete anatomical structure formation (obsolete GO:0010926)","synonyms":[{"name":"anatomical structure formation","type":"exact"}],"termid":"GO:0010926"}


id: PBO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 3","termid":"PBO:0060849"}


id: PBO:0069207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 462, pseudogene","termid":"PBO:0069207"}


id: RO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'expressed in'","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expresses","termid":"RO:0002292"}


id: PBO:0051821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 1","termid":"PBO:0051821"}


id: PBO:0083294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene GLN4/YOR168W","termid":"PBO:0083294"}


id: GO:0048249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphate from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:jid","PMID:8709965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity phosphate transmembrane transporter activity","synonyms":[{"name":"high affinity phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0048249"}


id: GO:2000383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ectoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ectoderm development","termid":"GO:2000383"}


id: GO:0085000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type V secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type V secretion system (obsolete GO:0085000)","termid":"GO:0085000"}


id: GO:0015778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hexuronide across a membrane. Hexuronides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of a hexuronate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"hexuronide transmembrane transport","synonyms":[{"name":"hexuronide transport","type":"broad"}],"termid":"GO:0015778"}


id: FYPO:0006990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the chromosome than normal in regions containing protein-coding genes.","definition_xrefs":["GO:0031509","PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"increased spatial extent of heterochromatin assembly at protein coding gene","synonyms":[{"name":"heterochromatin spreading at protein coding gene","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"increased spatial extent of heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0006990"}


id: GO:0045251
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating the electron transfer from an acyl-CoA molecule to ubiquinone via its flavin adenine dinucleotide (FAD) cofactor. Usually contains an alpha and a beta subunit and the structural cofactor adenosine monophosphate (AMP). Part of a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the electron transport system.","definition_xrefs":["GOC:bhm","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"electron transfer flavoprotein complex","synonyms":[{"name":"ETF complex","type":"exact"}],"termid":"GO:0045251"}


id: FYPO:0003118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular reactive oxygen species level during vegetative growth","synonyms":[{"name":"normal cellular ROS level","type":"exact"},{"name":"normal cellular reactive oxygen species level during mitotic cell cycle","type":"related"},{"name":"normal level of reactive oxygen species in cell","type":"exact"}],"termid":"FYPO:0003118"}


id: PBO:0049455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1","termid":"PBO:0049455"}


id: PBO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 12","termid":"PBO:0080177"}


id: GO:1903422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GOC:TermGenie","GOC:pad","PMID:22745285","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle recycling","synonyms":[{"name":"down regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of synaptic vesicle recycling","type":"exact"},{"name":"down-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of synaptic vesicle recycling","type":"exact"},{"name":"downregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of synaptic vesicle recycling","type":"exact"},{"name":"inhibition of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903422"}


id: PR:Q9Y7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.02","synonyms":[{"name":"Spom972h-mcp5","type":"exact"},{"name":"meiotically up-regulated gene 21 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear migration protein num1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7J9"}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: PBO:0075426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 16","termid":"PBO:0075426"}


id: PBO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom70 (predicted)","termid":"PBO:0001548"}


id: PBO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin","termid":"PBO:0048573"}


id: GO:0102753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + chlorophyllide b(1-) + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate = geranylgeranyl-chlorophyll b + diphosphoric acid.","definition_xrefs":["EC:2.5.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7673"],"termid":"GO:0102753"}


id: GO:0015767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lactose is a disaccharide 4-O-beta-D-galactopyranosyl-D-glucose, and constitutes roughly 5% of the milk in almost all mammals.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lactose transport","termid":"GO:0015767"}


id: GO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a symbiont organism mediated by a substance secreted by a host organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via secreted substance (obsolete GO:0052213)","synonyms":[{"name":"interaction with symbiont via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with symbiont via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052213"}


id: PBO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-4 (pseudogene)","termid":"PBO:0051353"}


id: GO:0097567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the right lateral basal body pair and the right middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally).","definition_xrefs":["PMID:16607022","GOC:giardia","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right tetrad","termid":"GO:0097567"}


id: SO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000308 sequence_feature_locating_method (obsolete SO:0000308)","termid":"SO:0000308"}


id: PBO:0057913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3616","termid":"PBO:0057913"}


id: GO:1902480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle.","definition_xrefs":["PMID:23885124","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mitotic spindle","synonyms":[{"name":"protein localisation in mitotic spindle","type":"exact"},{"name":"protein localisation to mitotic spindle","type":"exact"},{"name":"protein localization in mitotic spindle","type":"exact"}],"termid":"GO:1902480"}


id: PBO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitochondrial_transport","termid":"PBO:0031713"}


id: SO:0001600
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the resulting polypeptide structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3D_polypeptide_structure_variant","termid":"SO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_3D_structural_variant","synonyms":[{"name":"complex 3D structural variant","type":"exact"}],"termid":"SO:0001600"}


id: PBO:0011978
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YFL046W","termid":"PBO:0011978"}


id: PBO:0080908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma","termid":"PBO:0080908"}


id: PBO:0075453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 5","termid":"PBO:0075453"}


id: SO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The polypeptide sequence that remains when the cleaved peptide regions have been cleaved from the immature peptide.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"mature_protein_region_of_CDS","termid":"SO:0002249"},{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"},{"relation_name":"part_of","term_name":"immature_peptide_region","termid":"SO:0001063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mature_protein_region","secondary_identifiers":["BS:00149"],"synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"chain","type":"related"},{"name":"mature peptide","type":"related"},{"name":"mature protein region","type":"exact"}],"termid":"SO:0000419"}


id: GO:0021963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinothalamic tract morphogenesis","synonyms":[{"name":"dorsolateral tract of Lissauer morphogenesis","type":"exact"}],"termid":"GO:0021963"}


id: GO:1903123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thioredoxin peroxidase activity.","definition_xrefs":["GOC:PARL","GO_REF:0000059","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peroxidase activity","termid":"GO:2000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thioredoxin peroxidase activity","synonyms":[{"name":"regulation of TPx activity","type":"exact"},{"name":"regulation of TrxPx activity","type":"exact"},{"name":"regulation of thiol peroxidase activity","type":"exact"}],"termid":"GO:1903123"}


id: FYPO:0007175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during mitotic interphase","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localization to plasma membrane at cell division site abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007175"}


id: _global:added_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is actively added.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"added_during","termid":"_global:added_during"}


id: PBO:0066169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 2","termid":"PBO:0066169"}


id: GO:0042358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"},{"relation_name":"is_a","term_name":"thiamine-containing compound catabolic process","termid":"GO:0042725"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044248","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thiamine diphosphate catabolic process","synonyms":[{"name":"TPP catabolic process","type":"exact"},{"name":"TPP catabolism","type":"exact"},{"name":"thiamin diphosphate breakdown","type":"exact"},{"name":"thiamin diphosphate catabolic process","type":"exact"},{"name":"thiamin diphosphate catabolism","type":"exact"},{"name":"thiamin diphosphate degradation","type":"exact"},{"name":"thiamin pyrophosphate catabolic process","type":"exact"},{"name":"thiamin pyrophosphate catabolism","type":"exact"},{"name":"thiamine diphosphate catabolism","type":"exact"},{"name":"thiamine pyrophosphate catabolic process","type":"exact"},{"name":"thiamine pyrophosphate catabolism","type":"exact"}],"termid":"GO:0042358"}


id: GO:0043554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of arsenite to arsenate, using oxygen (O2) as the electron acceptor. Arsenite oxidase provides electrons to an electron carrier which transfers them to oxygen utilizing respiratory systems.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using arsenite as electron donor","termid":"GO:0043554"}


id: GO:0052685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + ADP + phosphate + perillyl-CoA.","definition_xrefs":["KEGG_REACTION:R06368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"perillic acid-CoA ligase (ADP-forming) activity","secondary_identifiers":["KEGG_REACTION:R06367","EC:6.2.1.-"],"synonyms":[{"name":"perillic acid:CoA ligase (ADP-forming) activity","type":"exact"},{"name":"perillyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052685"}


id: PBO:0075200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 12","termid":"PBO:0075200"}


id: PBO:0089187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1","termid":"PBO:0089187"}


id: PBO:0051098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin mu DNA binding protein 2","termid":"PBO:0051098"}


id: PBO:0091899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane high-affinity glucose:proton symporter Ght1","termid":"PBO:0091899"}


id: PBO:0088644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export chaperone","termid":"PBO:0088644"}


id: GO:1904534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:22579284","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"negatively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomeric loop disassembly","synonyms":[{"name":"down regulation of T loop disassembly","type":"exact"},{"name":"down regulation of telomeric loop disassembly","type":"exact"},{"name":"down-regulation of T loop disassembly","type":"exact"},{"name":"down-regulation of telomeric loop disassembly","type":"exact"},{"name":"downregulation of T loop disassembly","type":"exact"},{"name":"downregulation of telomeric loop disassembly","type":"exact"},{"name":"inhibition of T loop disassembly","type":"narrow"},{"name":"inhibition of telomeric loop disassembly","type":"narrow"},{"name":"negative regulation of T loop disassembly","type":"exact"}],"termid":"GO:1904534"}


id: PBO:0004776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup120","termid":"PBO:0004776"}


id: PBO:0111644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller, SMARCAD1 family Fft1","termid":"PBO:0111644"}


id: PBO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Expression Upregulated","termid":"PBO:0000122"}


id: PBO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUR7 family protein (predicted)","termid":"PBO:0002182"}


id: PBO:0002984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease Isp5","termid":"PBO:0002984"}


id: GO:1905781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["PMID:17401362","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid translocation","termid":"GO:0061093"},{"relation_name":"is_a","term_name":"negative regulation of execution phase of apoptosis","termid":"GO:1900118"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"down regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"down-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"downregulation of externalization of phosphatidylserine","type":"exact"},{"name":"downregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"inhibition of externalization of phosphatidylserine","type":"narrow"},{"name":"inhibition of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"negative regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905781"}


id: PBO:0064136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 3","termid":"PBO:0064136"}


id: PBO:0069371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 631, pseudogene","termid":"PBO:0069371"}


id: PBO:0111848
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family","termid":"PBO:0111848"}


id: GO:1990517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained in, a location within a photoreceptor outer segment, which is a portion of a modified sensory cilium.","definition_xrefs":["GOC:krc","PMID:20212494"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to photoreceptor outer segment (obsolete GO:1990517)","termid":"GO:1990517"}


id: PBO:0048379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARIN3 pseudogene 1","termid":"PBO:0048379"}


id: PBO:0055622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3061","termid":"PBO:0055622"}


id: GO:0022866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables transfer of one electron across a membrane.","definition_xrefs":["TC:5.B","ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane 1-electron transfer carrier (obsolete GO:0022866)","synonyms":[{"name":"transmembrane one-electron transfer carrier","type":"exact"}],"termid":"GO:0022866"}


id: PBO:0086525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR292C is not an essential gene","termid":"PBO:0086525"}


id: PBO:0080579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5","termid":"PBO:0080579"}


id: PBO:0044578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor-like 5 pseudogene 2","termid":"PBO:0044578"}


id: MOD:00110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine methyl disulfide.","definition_xrefs":["PubMed:163643","Unimod:39#C","OMSSA:179","PubMed:10555576","PubMed:2056535","PubMed:6381494","RESID:AA0101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine methyl disulfide","synonyms":[{"name":"(2R)-2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldithio)propanoic acid","type":"exact"},{"name":"2-amino-3-methyldisulfanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-(methyldisulfanediyl)-propanoic acid","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"L-3-(methyldithio)alanine","type":"exact"},{"name":"L-cysteine methyl disulfide","type":"exact"},{"name":"MOD_RES Cysteine methyl disulfide","type":"exact"},{"name":"Methylthio","type":"related"},{"name":"S-methylthio-L-cysteine","type":"exact"},{"name":"S-methylthiocysteine","type":"exact"},{"name":"methyl methanethiolsulfonate derivatized cysteine","type":"exact"},{"name":"methyl methanethiosulfonate derivatized cysteine","type":"exact"},{"name":"mmts","type":"exact"}],"termid":"MOD:00110"}


id: GO:0120248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound catabolic process","synonyms":[{"name":"alkyne substituted compound breakdown","type":"exact"},{"name":"alkyne substituted compound catabolic process","type":"exact"},{"name":"alkyne substituted compound catabolism","type":"exact"},{"name":"alkyne substituted compound degradation","type":"exact"}],"termid":"GO:0120248"}


id: FYPO:0007769
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin tethering at the nuclear periphery persists after the onset of mitosis. Normally, heterochromatic parts of chromosomes, such as centromeres and telomeres, are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased heterochromatin tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased heterochromatin anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased heterochromatin tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased heterochromatin tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased heterochromatin tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased heterochromatin tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007769","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: PBO:0070458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 1","termid":"PBO:0070458"}


id: PBO:0052945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte associated protein 2","termid":"PBO:0052945"}


id: SO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS at the 5' end, that causes elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["PMID:31216041","PMID:32020195","PMID:14732127","PMID:27984720","PMID:15864293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_extension","termid":"SO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_five_prime_extension","synonyms":[{"name":"CDS Extension 5 prime","type":"exact"},{"name":"CDS Extension five prime","type":"exact"},{"name":"elongated CDS five prime","type":"exact"},{"name":"elongated_CDS_five_prime","type":"exact"}],"termid":"SO:0002228"}


id: PATO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning away from an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misaligned with","termid":"PATO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned away from","termid":"PATO:0002174"}


id: PBO:0042205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin H pseudogene 1","termid":"PBO:0042205"}


id: PBO:0072123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a","termid":"PBO:0072123"}


id: PBO:0047589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen gamma chain","termid":"PBO:0047589"}


id: PBO:0076080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin interacting protein 2","termid":"PBO:0076080"}


id: PBO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_oxidative_stress","termid":"PBO:0030213"}


id: GO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about the assembly, orientation or integrity of the spindle is received and converted into a molecular signal, contributing to a spindle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in spindle checkpoint (obsolete GO:0072415)","synonyms":[{"name":"sensing involved in spindle checkpoint","type":"related"},{"name":"spindle checkpoint sensor mechanism","type":"related"},{"name":"spindle checkpoint sensor process","type":"related"}],"termid":"GO:0072415"}


id: PBO:0045145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 2","termid":"PBO:0045145"}


id: GO:0006751
data:
  {"annotated_genes":["SJAG_03316","SJAG_01612","SJAG_00903","SJAG_04858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94514,95333,98387,104839],"is_not":false,"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_03316":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glutathione catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione breakdown","type":"exact"},{"name":"glutathione catabolism","type":"exact"},{"name":"glutathione degradation","type":"exact"}],"termid":"GO:0006751","terms_by_termid":{"GO:0006751":null}}


id: GO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"positively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070760"}


id: GO:0043136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 3-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-8955794","MetaCyc:GLYCEROL-1-PHOSPHATASE-RXN"],"termid":"GO:0043136"}


id: PBO:0066068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor beta","termid":"PBO:0066068"}


id: PBO:0047818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 pseudogene 2","termid":"PBO:0047818"}


id: PBO:0087620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Cop9 signalosome; which is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling; functional equivalent of canonical Csn6 subunit of the COP9 signalosome","termid":"PBO:0087620"}


id: GO:0060232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of negative regulation of cell adhesion that results in a cell or sheet of cells splitting off from an existing epithelial sheet.","definition_xrefs":["PMID:18343170","GOC:dph","PMID:16962574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"delamination","termid":"GO:0060232"}


id: GO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronate = D-fructuronate.","definition_xrefs":["EC:5.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"glucuronate isomerase activity","secondary_identifiers":["RHEA:13049","MetaCyc:GLUCUROISOM-RXN"],"synonyms":[{"name":"D-glucuronate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucuronate isomerase activity","type":"related"},{"name":"D-glucuronate ketol-isomerase activity","type":"related"},{"name":"uronate isomerase activity","type":"related"},{"name":"uronic acid isomerase activity","type":"related"},{"name":"uronic isomerase activity","type":"related"}],"termid":"GO:0008880"}


id: PBO:0027894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027894"}


id: PBO:0047655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 7","termid":"PBO:0047655"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: PBO:0071660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 1","termid":"PBO:0071660"}


id: PBO:0081675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 596","termid":"PBO:0081675"}


id: PBO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40","termid":"PBO:0090189"}


id: PBO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 1","termid":"PBO:0075733"}


id: PBO:0010344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin regulatory subunit (calcineurin B)","termid":"PBO:0010344"}


id: PBO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylaminoacyl-peptide hydrolase","termid":"PBO:0039693"}


id: PBO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Pci2 (predicted)","termid":"PBO:0018278"}


id: FYPO:0007186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea","synonyms":[{"name":"increased ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS level during cellular response to hydroxyurea","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to HU","type":"exact"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007186"}


id: PBO:0030821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sodium_export","termid":"PBO:0030821"}


id: GO:0070216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an isoform of the MDM4 protein, a negative regulator of p53.","definition_xrefs":["GOC:mah","GOC:nln"],"gene_count":0,"genotype_count":0,"name":"obsolete MDM4 binding (obsolete GO:0070216)","synonyms":[{"name":"MDM4 binding","type":"exact"},{"name":"MDMX binding","type":"exact"}],"termid":"GO:0070216"}


id: GO:0005665
data:
  {"annotated_genes":["SJAG_02070","SJAG_04261","SJAG_01436","SJAG_02101","SJAG_01713","SJAG_01313","SJAG_02506","SJAG_00458","SJAG_04030","SJAG_00119","SJAG_01765","SJAG_04894","SJAG_04559"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88171,90047,90235,92953,97129,97900,99467,101898,103815,105393,108968,109923,110785],"is_not":false,"summary":null,"term":"GO:0005665"}]},"cv_name":"cellular_component","definition":"RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04559":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase II, core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex","type":"exact"},{"name":"RNA polymerase II complex","type":"broad"},{"name":"RNAP II complex","type":"broad"}],"termid":"GO:0005665","terms_by_termid":{"GO:0005665":null}}


id: PBO:0001897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb8","termid":"PBO:0001897"}


id: PBO:0081408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 256","termid":"PBO:0081408"}


id: PBO:0044255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biogenesis 43 C-terminal homolog","termid":"PBO:0044255"}


id: PBO:0065544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 receptor","termid":"PBO:0065544"}


id: GO:0032467
data:
  {"annotated_genes":["SJAG_03631","SJAG_04666","SJAG_04776","SJAG_02392","SJAG_05290","SJAG_00514","SJAG_04597","SJAG_03936","SJAG_03342","SJAG_01787","SJAG_01188","SJAG_00082","SJAG_01114","SJAG_03704","SJAG_01805","SJAG_02838","SJAG_04468","SJAG_00845","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90556,86170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[109486,83725,90725,90557,106647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[89948,86171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[115306,86934,106890,99833,92000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[89949,109487,111583,103164,88558,113984,101287,86042,102492,85415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[88559,83726,90560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the division of the cytoplasm of a cell, and its separation into two daughter cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinesis","termid":"GO:0032465"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokinesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"secondary_identifiers":["GO:0071777"],"synonyms":[{"name":"activation of cytokinesis","type":"narrow"},{"name":"positive regulation of cell cycle cytokinesis","type":"related"},{"name":"stimulation of cytokinesis","type":"narrow"},{"name":"up regulation of cytokinesis","type":"exact"},{"name":"up-regulation of cytokinesis","type":"exact"},{"name":"upregulation of cytokinesis","type":"exact"}],"termid":"GO:0032467","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903490":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: PBO:0062736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 3 pseudogene","termid":"PBO:0062736"}


id: PBO:0082223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in intracellular amino acid permease sorting, functions in heat shock element mediated gene expression, essential for growth in stress conditions; BUL2 has a paralog, BUL1, that arose from the whole genome duplication","termid":"PBO:0082223"}


id: GO:0010975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron projection development","synonyms":[{"name":"regulation of neurite biosynthesis","type":"narrow"},{"name":"regulation of neurite development","type":"narrow"},{"name":"regulation of neurite formation","type":"narrow"},{"name":"regulation of neurite growth","type":"narrow"}],"termid":"GO:0010975"}


id: PBO:0052101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 4","termid":"PBO:0052101"}


id: GO:0150145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"positively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD80 production","synonyms":[{"name":"positive regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150145"}


id: PBO:0083453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CYC8","termid":"PBO:0083453"}


id: PBO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium channel regulatory subunit Yam8","termid":"PBO:0000253"}


id: PBO:0073677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRPG antisense RNA 1","termid":"PBO:0073677"}


id: PBO:0052048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 4","termid":"PBO:0052048"}


id: GO:1902944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any aspartic-type endopeptidase activity that is involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:10206644","GOC:sjp","GO_REF:0000061","PMID:24577224","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"}],"termid":"GO:1902944"}


id: PBO:0017441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_expression_of","termid":"PBO:0017441"}


id: SO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a translocation is simply moving genetic material from one chromosome to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocaton_attribute","termid":"SO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertional","termid":"SO:0001522"}


id: PBO:0090484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine synthase reductase","termid":"PBO:0090484"}


id: GO:1990191
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex facilitating ATP-dependent cobalamin (vitamin B12) transport through inner cell membrane (periplasm to cytoplasm) in Gram-negative bacteria. In E. coli the system is composed of a periplasmic cobalamin-binding protein (BtuF), an integral membrane homodimer, BtuC, and a cytoplasmic ATP-binding homodimer BtuD.","definition_xrefs":["GOC:bhm","PMID:22569249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"cobalamin transport complex","synonyms":[{"name":"BtuCDF complex","type":"exact"},{"name":"cobalamin-transporting BtuCDF complex","type":"exact"},{"name":"vitamin B12 transport complex","type":"exact"},{"name":"vitamin B12-transporting BtuCDF complex","type":"exact"}],"termid":"GO:1990191"}


id: GO:0006135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydropteridine reduction (obsolete GO:0006135)","synonyms":[{"name":"dihydropteridine reduction","type":"exact"}],"termid":"GO:0006135"}


id: PBO:0027135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere-nuclear_envelope_distance","termid":"PBO:0027135"}


id: GO:0044133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of a symbiont within the cells or tissues of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host (obsolete GO:0044133)","termid":"GO:0044133"}


id: GO:0070322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating deprivation of nitrogen.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of translation in response to nitrogen starvation (obsolete GO:0070322)","synonyms":[{"name":"down regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"down-regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"downregulation of translation in response to nitrogen starvation","type":"exact"},{"name":"inhibition of translation in response to nitrogen starvation","type":"narrow"}],"termid":"GO:0070322"}


id: GO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of neuroblast polarity","secondary_identifiers":["GO:0043343","GO:0043340"],"synonyms":[{"name":"establishment of neuroblast cell polarity","type":"exact"}],"termid":"GO:0045200"}


id: GO:0034902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan sulfate + H2O = endosulfan diol + sulfite.","definition_xrefs":["UM-BBD_reactionID:r1387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"endosulfan sulfate hydrolase activity","termid":"GO:0034902"}


id: GO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elongation of chondroitin sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of chondroitin sulfate.","definition_xrefs":["PMID:11788602","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"part_of","term_name":"chondroitin sulfate proteoglycan biosynthetic process","termid":"GO:0050650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan chain elongation","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"}],"termid":"GO:0050653"}


id: GO:0050136
data:
  {"annotated_genes":["SJAG_01539","SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92865,108980],"is_not":false,"summary":null,"term":"GO:0050136"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + a quinone = NAD+ + a quinol.","definition_xrefs":["EC:1.6.5.9","GOC:mah","RHEA:46160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase activity","termid":"GO:0003954"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01539":null,"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADH:ubiquinone reductase (non-electrogenic) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.6.99.5-RXN"],"synonyms":[{"name":"NADH dehydrogenase (quinone) activity","type":"related"}],"termid":"GO:0050136","terms_by_termid":{"GO:0050136":null}}


id: PBO:0065826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6A, member RAS oncogene family","termid":"PBO:0065826"}


id: GO:0070675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hypoxanthine + H2O + O2 = xanthine + H2O2.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hypoxanthine oxidase activity","secondary_identifiers":["Reactome:R-HSA-74247"],"synonyms":[{"name":"Schardinger enzyme activity","type":"related"},{"name":"hypoxanthine-xanthine oxidase activity","type":"broad"},{"name":"hypoxanthine:O2 oxidoreductase activity","type":"related"},{"name":"hypoxanthine:oxygen oxidoreductase activity","type":"related"},{"name":"schardinger enzyme","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"}],"termid":"GO:0070675"}


id: PBO:0052679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 47","termid":"PBO:0052679"}


id: GO:0046431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-4-hydroxymandelate, the anion of a hydroxylated derivative of mandelate (alpha-hydroxybenzeneacetate).","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(R)-4-hydroxymandelate metabolic process","synonyms":[{"name":"(R)-4-hydroxymandelate metabolism","type":"exact"}],"termid":"GO:0046431"}


id: PBO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 2","termid":"PBO:0048631"}


id: PBO:0061995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily E member 1 pseudogene","termid":"PBO:0061995"}


id: PBO:0004892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Rsm25 (predicted)","termid":"PBO:0004892"}


id: GO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that contributes to the establishment of planar cell polarity.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in establishment of planar polarity","termid":"GO:0090250"}


id: PBO:0036321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat/ ubiquitin-protein ligase E3 subunit Vps8 (predicted)","termid":"PBO:0036321"}


id: PBO:0088589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit, TREX complex subunit Sus1","termid":"PBO:0088589"}


id: GO:1905243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to 3,3',5-triiodo-L-thyronine","termid":"GO:1905242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"cellular response to Liothyronin","type":"exact"},{"name":"cellular response to Liothyronine","type":"exact"},{"name":"cellular response to Liothyroninum","type":"exact"}],"termid":"GO:1905243"}


id: PBO:0109225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 6","termid":"PBO:0109225"}


id: PBO:0084988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent serine dehydrogenase and carbonyl reductase; acts on serine, L-allo-threonine, and other 3-hydroxy acids; green fluorescent protein fusion protein localizes to the cytoplasm and nucleus; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0084988"}


id: GO:1901875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["PMID:21209915","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"positively_regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of post-translational protein modification","synonyms":[{"name":"activation of PTM","type":"exact"},{"name":"activation of post-translational amino acid modification","type":"exact"},{"name":"activation of post-translational modification","type":"exact"},{"name":"activation of post-translational protein modification","type":"narrow"},{"name":"activation of posttranslational amino acid modification","type":"exact"},{"name":"activation of posttranslational modification","type":"exact"},{"name":"activation of posttranslational protein modification","type":"exact"},{"name":"positive regulation of PTM","type":"exact"},{"name":"positive regulation of post-translational amino acid modification","type":"exact"},{"name":"positive regulation of post-translational modification","type":"exact"},{"name":"positive regulation of posttranslational amino acid modification","type":"exact"},{"name":"positive regulation of posttranslational modification","type":"exact"},{"name":"positive regulation of posttranslational protein modification","type":"exact"},{"name":"up regulation of PTM","type":"exact"},{"name":"up regulation of post-translational amino acid modification","type":"exact"},{"name":"up regulation of post-translational modification","type":"exact"},{"name":"up regulation of post-translational protein modification","type":"exact"},{"name":"up regulation of posttranslational amino acid modification","type":"exact"},{"name":"up regulation of posttranslational modification","type":"exact"},{"name":"up regulation of posttranslational protein modification","type":"exact"},{"name":"up-regulation of PTM","type":"exact"},{"name":"up-regulation of post-translational amino acid modification","type":"exact"},{"name":"up-regulation of post-translational modification","type":"exact"},{"name":"up-regulation of post-translational protein modification","type":"exact"},{"name":"up-regulation of posttranslational amino acid modification","type":"exact"},{"name":"up-regulation of posttranslational modification","type":"exact"},{"name":"up-regulation of posttranslational protein modification","type":"exact"},{"name":"upregulation of PTM","type":"exact"},{"name":"upregulation of post-translational amino acid modification","type":"exact"},{"name":"upregulation of post-translational modification","type":"exact"},{"name":"upregulation of post-translational protein modification","type":"exact"},{"name":"upregulation of posttranslational amino acid modification","type":"exact"},{"name":"upregulation of posttranslational modification","type":"exact"},{"name":"upregulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901875"}


id: PBO:0048894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 14, pseudogene","termid":"PBO:0048894"}


id: PBO:0066697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 1 homolog","termid":"PBO:0066697"}


id: GO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of neurological system.","definition_xrefs":["GOC:ai","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process","synonyms":[{"name":"neurological system process","type":"exact"},{"name":"neurophysiological process","type":"exact"},{"name":"pan-neural process","type":"related"}],"termid":"GO:0050877"}


id: GO:0003777
data:
  {"annotated_genes":["SJAG_01613","SJAG_02286","SJAG_01297","SJAG_00851","SJAG_00773","SJAG_00930","SJAG_00042","SJAG_00332","SJAG_04745","SJAG_01546","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60853,85145,90921,92921,99680],"is_not":false,"summary":null,"term":"GO:0003777"},{"annotations":[83958,90922,92922,95369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[99681,87305,99881,74667,100035,90923,104389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule, driven by ATP hydrolysis.","definition_xrefs":["PMID:32684327","PMID:19686686","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003774","GO:0003674"],"is_obsolete":false,"name":"microtubule motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9610627","GO:1990939","Reactome:R-HSA-177479","Reactome:R-HSA-265160"],"synonyms":[{"name":"ATP-dependent microtubule motor activity","type":"exact"},{"name":"axonemal motor activity","type":"narrow"},{"name":"dynein","type":"broad"},{"name":"dynein ATPase activity","type":"narrow"},{"name":"kinesin","type":"broad"},{"name":"kinesin motor activity","type":"narrow"},{"name":"kinetochore motor activity","type":"narrow"}],"termid":"GO:0003777","terms_by_termid":{"GO:0003777":null,"GO:0008569":null,"GO:0008574":null}}


id: PBO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 4","termid":"PBO:0052208"}


id: PBO:0046987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member L, pseudogene","termid":"PBO:0046987"}


id: PBO:0039148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 3","termid":"PBO:0039148"}


id: MOD:01876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(12)C labeled succinyl group.","definition_xrefs":["PubMed:11857757","PubMed:12175151","Unimod:64","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, light form (+4amu, 4H2) site N-term","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01876"}


id: PBO:0063403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL2 pseudogene 2","termid":"PBO:0063403"}


id: PBO:0073025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase 1","termid":"PBO:0073025"}


id: PBO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease, possibly DNA damage related (predicted)","termid":"PBO:0017039"}


id: PBO:0059698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 6","termid":"PBO:0059698"}


id: PBO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39 (predicted)","termid":"PBO:0001640"}


id: GO:0050834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide","termid":"GO:0050834"}


id: SO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GTGRGAA, bound by CSL (CBF1/RBP-JK/Suppressor of Hairless/LAG-1) transcription factors.","definition_xrefs":["PMID:19101542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSL_response_element","synonyms":[{"name":"CSL response element","type":"exact"}],"termid":"SO:0001839"}


id: PBO:0067946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 248","termid":"PBO:0067946"}


id: GO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of a cytokine.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytokine production","secondary_identifiers":["GO:0042035","GO:0050707"],"synonyms":[{"name":"regulation of cytokine anabolism","type":"exact"},{"name":"regulation of cytokine biosynthesis","type":"exact"},{"name":"regulation of cytokine biosynthetic process","type":"narrow"},{"name":"regulation of cytokine formation","type":"exact"},{"name":"regulation of cytokine secretion","type":"narrow"},{"name":"regulation of cytokine synthesis","type":"exact"}],"termid":"GO:0001817"}


id: PBO:0088472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal glutamine amidohydrolase, alpha beta roll superfamily","termid":"PBO:0088472"}


id: PBO:0064924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP5 tetratricopeptide repeat domain containing 1, pseudogene","termid":"PBO:0064924"}


id: GO:0008381
data:
  {"annotated_genes":["SJAG_05342","SJAG_04668","SJAG_02877","SJAG_02019","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91836],"is_not":false,"summary":null,"term":"GO:0008381"},{"annotations":[99898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[110053,88548,88490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mechanosensitive monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:1.A.23.2.1","GO:0022833"],"synonyms":[{"name":"mechanically gated channel activity","type":"exact"},{"name":"mechanically-gated channel activity","type":"exact"},{"name":"mechanically-gated ion channel activity","type":"exact"},{"name":"mechanosensitive ion channel activity","type":"broad"}],"termid":"GO:0008381","terms_by_termid":{"GO:0008381":null,"GO:0015275":null,"GO:0140135":null}}


id: GO:0032350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone metabolic process","synonyms":[{"name":"regulation of hormone metabolism","type":"exact"}],"termid":"GO:0032350"}


id: GO:0046112
data:
  {"annotated_genes":["SJAG_00412","SJAG_05024","SJAG_01859","SJAG_00694","SJAG_03164","SJAG_03140","SJAG_04354","SJAG_01661","SJAG_00779","SJAG_01814","SJAG_00392","SJAG_02364","SJAG_00197","SJAG_00444","SJAG_00964","SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89555,108035,111688,107196,83982,94638,102628,112839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[106484,106373,113455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[89678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[93951,110625,106374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[85626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019856"},{"annotations":[88114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase anabolism","type":"exact"},{"name":"nucleobase biosynthesis","type":"exact"},{"name":"nucleobase formation","type":"exact"},{"name":"nucleobase synthesis","type":"exact"}],"termid":"GO:0046112","terms_by_termid":{"GO:0006168":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0019856":null,"GO:0046084":null}}


id: PBO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0001145"}


id: PBO:0077963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 16-1","termid":"PBO:0077963"}


id: GO:0140236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the presynapse.","definition_xrefs":["PMID:27321671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation at presynapse","termid":"GO:0140236"}


id: PBO:0014576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens CLNS1A","termid":"PBO:0014576"}


id: PBO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylethanolamine acid amidase","termid":"PBO:0060418"}


id: FYPO:0006668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during G0 phase in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear morphology during G0","synonyms":[{"name":"normal nuclear morphology during cell quiescence","type":"exact"},{"name":"normal nuclear morphology during quiescence","type":"exact"}],"termid":"FYPO:0006668"}


id: GO:0034014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triglyceride stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triglyceride","synonyms":[{"name":"response to triacylglyceride","type":"exact"},{"name":"response to triacylglycerol","type":"exact"}],"termid":"GO:0034014"}


id: GO:0030185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitric oxide, nitrogen monoxide, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nitric oxide transport","termid":"GO:0030185"}


id: PBO:0088900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, involved in mitochondrial gene expression","termid":"PBO:0088900"}


id: PBO:0084222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family ATPase; constituent of the import motor component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); involved in protein translocation and folding; subunit of SceI endonuclease; SSC1 has a paralog, ECM10, that arose from the whole genome duplication","termid":"PBO:0084222"}


id: PBO:0077644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 1","termid":"PBO:0077644"}


id: FYPO:0002979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein localisation to chromatin during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to MMS","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002979"}


id: GO:0102820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: norbixin + S-adenosyl-L-methionine = bixin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"norbixin methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8238"],"termid":"GO:0102820"}


id: PBO:0068441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 15, pseudogene","termid":"PBO:0068441"}


id: MOD:01675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminohexosyl)-L-serine.","definition_xrefs":["OMSSA:184","Unimod:43#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(N-acetylamino)hexosyl-L-serine","synonyms":[{"name":"(S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-hexopyranosyloxy)propanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylhexosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylhexosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-serine","type":"exact"},{"name":"OHexNAcSer","type":"exact"},{"name":"hexNAcS","type":"exact"}],"termid":"MOD:01675"}


id: GO:0052592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.17.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0052592"}


id: PBO:0031480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actin_cortical_patch","termid":"PBO:0031480"}


id: GO:0097620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxy-2-phenylacetate + acceptor = phenylglyoxylate + reduced acceptor.","definition_xrefs":["RHEA:43112","PMID:1731758","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-mandelate dehydrogenase activity","synonyms":[{"name":"D-mandelate dehydrogenase activity","type":"exact"}],"termid":"GO:0097620"}


id: PBO:0078345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 11-1","termid":"PBO:0078345"}


id: PBO:0071238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 79","termid":"PBO:0071238"}


id: PBO:0035901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035901"}


id: GO:0007041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a lysosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"lysosomal transport","termid":"GO:0007041"}


id: PBO:0004816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp10 (predicted)","termid":"PBO:0004816"}


id: GO:1990165
data:
  {"annotated_genes":["SJAG_16460","SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92027,111804],"is_not":false,"summary":null,"term":"GO:1990165"}]},"cv_name":"molecular_function","definition":"Binding to damaged DNA containing single-strand breaks (SSBs).","definition_xrefs":["GOC:al","PMID:21984210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04410":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"single-strand break-containing DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SSB-containing DNA binding","type":"exact"},{"name":"single-strand break-containing damaged DNA binding","type":"exact"}],"termid":"GO:1990165","terms_by_termid":{"GO:1990165":null}}


id: PBO:0067849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 151","termid":"PBO:0067849"}


id: PBO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","termid":"PBO:0090053"}


id: PBO:0053312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, p53 induced transcript","termid":"PBO:0053312"}


id: SO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a protein coding gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_variant","synonyms":[{"name":"Jannovar:coding_transcript_variant","type":"exact"},{"name":"coding transcript variant","type":"exact"}],"termid":"SO:0001968"}


id: PATO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being arranged like rays or radii; radiating from a common center.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"star shaped","synonyms":[{"name":"stellate","type":"exact"}],"termid":"PATO:0002065"}


id: SO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that increases the level or amount of gene product produced.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered_gene_product_level","termid":"SO:0002314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_gene_product_level","synonyms":[{"name":"increased gene product level","type":"exact"},{"name":"increased transcription level","type":"exact"},{"name":"increased_transcription_level","type":"exact"}],"termid":"SO:0002315"}


id: PBO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export receptor Nxt1","termid":"PBO:0001216"}


id: GO:0014820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within tonic smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the tonic smooth muscle, the muscle contraction occurs without an ordered sarcomeric structure. Tonic smooth muscle contraction occurs as a sustained continuous contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tonic smooth muscle contraction","termid":"GO:0014820"}


id: PBO:0040637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain abundant membrane attached signal protein 1","termid":"PBO:0040637"}


id: GO:0102383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviol + UDP-alpha-D-glucose = 19-O-beta-glucopyranosyl-steviol + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steviol 19-O glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13520"],"termid":"GO:0102383"}


id: PATO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of it being a quadrilateral polygon in which all four angles are right angles.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Rectangular"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallelogram","termid":"PATO:0002317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rectangular","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/en/e/ee/Shaperec.svg"],"termid":"PATO:0001867"}


id: PBO:0087593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087593"}


id: PBO:0108577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain and nuclease, Snd1","termid":"PBO:0108577"}


id: PBO:0042544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 9","termid":"PBO:0042544"}


id: PBO:0042706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 5","termid":"PBO:0042706"}


id: PBO:0089673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multispanning 7TM plasma membrane rhodopsin family protein, implicated in signalling","termid":"PBO:0089673"}


id: PBO:0044182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin delta 2","termid":"PBO:0044182"}


id: MOD:01424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a quinaldate, kynurenate, or xanthurenate group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinaldate modified residue","termid":"MOD:01424"}


id: PBO:0055886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8C divergent transcript","termid":"PBO:0055886"}


id: PBO:0087256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ykr2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh1p; PKH2 has a paralog, PKH1, that arose from the whole genome duplication","termid":"PBO:0087256"}


id: GO:0018448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymethylmethylsilanediol + O2 + 2 H+ + 2 e- = formylmethylsilanediol + 2 H2O.","definition_xrefs":["UM-BBD_reactionID:r0638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylmethylsilanediol oxidase activity","termid":"GO:0018448"}


id: PBO:0085600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; may play an indirect role in fluid-phase endocytosis; protein abundance increases in response to DNA replication stress; SDS24 has a paralog, SDS23, that arose from the whole genome duplication","termid":"PBO:0085600"}


id: GO:0072303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"positively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular metanephric mesangial cell proliferation","termid":"GO:0072303"}


id: PBO:0084076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication","termid":"PBO:0084076"}


id: PBO:0071118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 120","termid":"PBO:0071118"}


id: PBO:0041808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 19","termid":"PBO:0041808"}


id: PBO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 13","termid":"PBO:0070324"}


id: PBO:0080619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 55","termid":"PBO:0080619"}


id: PBO:0088963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg13","termid":"PBO:0088963"}


id: PBO:0071425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 31","termid":"PBO:0071425"}


id: PBO:0050235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 13","termid":"PBO:0050235"}


id: PBO:0012597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1 family chromodomain protein 2","termid":"PBO:0012597"}


id: GO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an early endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"early endosome lumen","termid":"GO:0031905"}


id: PBO:0049861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart development protein with EGF like domains 1","termid":"PBO:0049861"}


id: PR:Q9P7Y0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr4 gene.","definition_xrefs":["UniProtKB:Q9P7Y0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.05","synonyms":[{"name":"Spom972h-ssr4","type":"exact"}],"termid":"PR:Q9P7Y0"}


id: GO:0044191
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the host cell mitochondrion and form the host cell mitochondrial envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell mitochondrial envelope","termid":"GO:0044190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial membrane","termid":"GO:0044191"}


id: FYPO:0003984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of an amino acid measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular amino acid level during vegetative growth","synonyms":[{"name":"abnormal cellular amino acid level during vegetative growth","type":"exact"},{"name":"altered cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"altered level of amino acid in cell","type":"exact"}],"termid":"FYPO:0003984"}


id: GO:1903589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["PMID:23388056","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell proliferation","termid":"GO:0001938"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"activation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"activation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"positive regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"up-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"upregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"upregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"}],"termid":"GO:1903589"}


id: PR:Q10275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mba1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.11","synonyms":[{"name":"Spom972h-mba1","type":"exact"}],"termid":"PR:Q10275"}


id: GO:1904166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cholesterol homeostasis.","definition_xrefs":["GOC:BHF","GOC:rph","GO_REF:0000058","GOC:TermGenie","PMID:22541436"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol homeostasis (obsolete GO:1904166)","synonyms":[{"name":"down regulation of cholesterol homeostasis","type":"exact"},{"name":"down-regulation of cholesterol homeostasis","type":"exact"},{"name":"downregulation of cholesterol homeostasis","type":"exact"},{"name":"inhibition of cholesterol homeostasis","type":"narrow"}],"termid":"GO:1904166"}


id: GO:0032792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor CREB.","definition_xrefs":["GOC:dph","GOC:ecd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"negative regulation of CREB transcription factor activity","synonyms":[{"name":"CREB inhibitor","type":"related"},{"name":"inhibition of CREB transcription factor","type":"exact"}],"termid":"GO:0032792"}


id: PBO:0055575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3011","termid":"PBO:0055575"}


id: PBO:0005590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad5","termid":"PBO:0005590"}


id: PBO:0055387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2817","termid":"PBO:0055387"}


id: PBO:0066825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 124","termid":"PBO:0066825"}


id: SO:0000863
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an mRNA feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_attribute","synonyms":[{"name":"mRNA attribute","type":"exact"}],"termid":"SO:0000863"}


id: GO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:mah","PMID:16482511","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"positively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-17 production","secondary_identifiers":["GO:0045380","GO:1905078"],"synonyms":[{"name":"activation of interleukin-17 production","type":"narrow"},{"name":"positive regulation of CTLA-8 production","type":"exact"},{"name":"positive regulation of Cytotoxic T-lymphocyte-associated antigen 8 production","type":"exact"},{"name":"positive regulation of IL-17 production","type":"exact"},{"name":"positive regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-17 secretion","type":"narrow"},{"name":"stimulation of interleukin-17 production","type":"narrow"},{"name":"up regulation of interleukin-17 production","type":"exact"},{"name":"up-regulation of interleukin-17 production","type":"exact"},{"name":"upregulation of interleukin-17 production","type":"exact"}],"termid":"GO:0032740"}


id: PBO:0074561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 15","termid":"PBO:0074561"}


id: PBO:0060489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 11","termid":"PBO:0060489"}


id: GO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-2 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-2 adrenergic receptor binding","synonyms":[{"name":"beta-2 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031698"}


id: PR:Q09727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp20 gene.","definition_xrefs":["UniProtKB:Q09727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L23-like mitochondrial ribosomal protein Mrp20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.08","synonyms":[{"name":"54S ribosomal protein L23, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPAC31A2.08","type":"related"},{"name":"Spom972h-mrp20","type":"exact"}],"termid":"PR:Q09727"}


id: GO:0010574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"}


id: GO:0003064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the hormones modulates the rate of heart muscle contraction. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate by hormone","synonyms":[{"name":"hormonal cardiac chronotropy","type":"exact"},{"name":"regulation of the rate of heart contraction by hormone","type":"exact"}],"termid":"GO:0003064"}


id: GO:0046821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal DNA","secondary_identifiers":["Wikipedia:Extrachromosomal_DNA"],"termid":"GO:0046821"}


id: GO:0003919
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110236],"is_not":false,"summary":null,"term":"GO:0003919"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + FMN = diphosphate + FAD.","definition_xrefs":["EC:2.7.7.2","RHEA:17237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"FMN adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FADSYN-RXN","Reactome:R-HSA-196929","KEGG_REACTION:R00161"],"synonyms":[{"name":"ATP:FMN adenylyltransferase activity","type":"exact"},{"name":"FAD diphosphorylase activity","type":"related"},{"name":"FAD pyrophosphorylase activity","type":"related"},{"name":"FAD synthetase activity","type":"related"},{"name":"adenosine triphosphate-riboflavin mononucleotide transadenylase activity","type":"related"},{"name":"adenosine triphosphate-riboflavine mononucleotide transadenylase activity","type":"related"},{"name":"flavin adenine dinucleotide synthetase activity","type":"related"},{"name":"riboflavin adenine dinucleotide pyrophosphorylase activity","type":"related"},{"name":"riboflavin mononucleotide adenylyltransferase activity","type":"related"},{"name":"riboflavine adenine dinucleotide adenylyltransferase activity","type":"related"}],"termid":"GO:0003919","terms_by_termid":{"GO:0003919":null}}


id: PBO:0091939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent FMN reductase","termid":"PBO:0091939"}


id: PBO:0089733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6","termid":"PBO:0089733"}


id: GO:1904630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:19765580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to diterpene","termid":"GO:1904629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diterpene","termid":"GO:1904630"}


id: FYPO:0001462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular calcium level","synonyms":[{"name":"abnormal cellular calcium accumulation","type":"related"},{"name":"abnormal cellular calcium level","type":"exact"},{"name":"altered cellular calcium ion level","type":"exact"},{"name":"altered cellular calcium level during mitotic cell cycle","type":"related"},{"name":"altered cellular calcium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001462"}


id: GO:1903700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a caecum over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0-683-40008-8","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caecum development","synonyms":[{"name":"blind intestine development","type":"related"},{"name":"blindgut development","type":"related"},{"name":"caeca development","type":"narrow"},{"name":"ceca development","type":"narrow"},{"name":"cecum development","type":"exact"},{"name":"intestinum caecum development","type":"related"},{"name":"intestinum crassum caecum development","type":"exact"},{"name":"intestinum crassum cecum development","type":"related"}],"termid":"GO:1903700"}


id: GO:0052692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: raffinose + H2O = alpha-D-galactose + sucrose.","definition_xrefs":["RHEA:70275","PMID:20739305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-galactosidase activity","termid":"GO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"raffinose alpha-galactosidase activity","secondary_identifiers":["KEGG_REACTION:R01103","MetaCyc:RXN-11502"],"synonyms":[{"name":"alkaline alpha-galactosidase activity","type":"broad"},{"name":"raffinose galactohydrolase activity","type":"broad"},{"name":"raffinose-specific alkaline alpha-galactosidase activity","type":"exact"}],"termid":"GO:0052692"}


id: PBO:0080155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vinculin","termid":"PBO:0080155"}


id: GO:0015184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-cystine from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators","ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-cystine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5340130"],"synonyms":[{"name":"L-cystine transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015184"}


id: GO:0034374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.","definition_xrefs":["GOC:mah","GOC:rl","GOC:BHF","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle remodeling","synonyms":[{"name":"LDL remodeling","type":"exact"},{"name":"LDL remodelling","type":"exact"},{"name":"low-density lipoprotein particle remodelling","type":"exact"},{"name":"small dense LDL formation","type":"related"},{"name":"small dense low-density lipoprotein particle formation","type":"related"}],"termid":"GO:0034374"}


id: PBO:0112004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin adaptor for Prw1-Clr6 REX1BD","termid":"PBO:0112004"}


id: GO:0050068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + carbamoyl phosphate = L-homocitrulline + H+ + phosphate.","definition_xrefs":["RHEA:17121","EC:2.1.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"lysine carbamoyltransferase activity","secondary_identifiers":["MetaCyc:LYSINE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R01396"],"synonyms":[{"name":"carbamoyl-phosphate:L-lysine carbamoyltransferase activity","type":"related"},{"name":"lysine transcarbamylase activity","type":"related"}],"termid":"GO:0050068"}


id: GO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aflatoxin, a fungal metabolite found as a contaminant in moldy grains that induces liver cancer. Aflatoxin induces a G to T transversion at codon 249 of p53, leading to its inactivation. Aflatoxin is converted to a chemical carcinogen by P450.","definition_xrefs":["GOC:ai","PMID:20807200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"aflatoxin metabolic process","termid":"GO:0046222"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound catabolic process","termid":"GO:1901377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0098754","GO:0044248"],"is_obsolete":false,"name":"aflatoxin catabolic process","synonyms":[{"name":"aflatoxin breakdown","type":"exact"},{"name":"aflatoxin catabolism","type":"exact"},{"name":"aflatoxin degradation","type":"exact"}],"termid":"GO:0046223"}


id: GO:0019050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus gene product suppresses host apoptosis, leading to a decrease in the frequency, rate or extent of apoptosis in the host cell.","definition_xrefs":["ISBN:0781718325","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host apoptotic process (obsolete GO:0019050)","synonyms":[{"name":"inhibition of host caspases by virus","type":"narrow"},{"name":"negative regulation by virus of host apoptosis","type":"exact"},{"name":"negative regulation of apoptosis by virus","type":"exact"},{"name":"suppression by virus of host apoptosis","type":"exact"},{"name":"suppression by virus of host cysteine-type endopeptidase activity involved in apoptotic process","type":"narrow"},{"name":"suppression of apoptosis in host by virus","type":"exact"}],"termid":"GO:0019050"}


id: PBO:0079292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 10","termid":"PBO:0079292"}


id: MOD:00417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidoethyl-L-cysteine.","definition_xrefs":["OMSSA:5","DeltaMass:72","Unimod:24#C","PubMed:1481983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-carboxamidoethyl-L-cysteine","synonyms":[{"name":"Acrylamide adduct","type":"related"},{"name":"PAM-Cys","type":"exact"},{"name":"Propionamide","type":"related"},{"name":"Propionamide or Acrylamide adduct","type":"exact"},{"name":"S-(3-amino-3-oxopropyl)cysteine","type":"exact"},{"name":"S-carbamoylethyl-L-cysteine","type":"exact"},{"name":"S-propanamide-L-cysteine","type":"exact"},{"name":"propionamidec","type":"exact"}],"termid":"MOD:00417"}


id: GO:1900681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving octadecene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"octadecene metabolic process","synonyms":[{"name":"octadecene metabolism","type":"exact"}],"termid":"GO:1900681"}


id: PBO:0084774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084774"}


id: GO:0031389
data:
  {"annotated_genes":["SJAG_02563","SJAG_00272","SJAG_01010","SJAG_02182","SJAG_00729"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85297,85746,90106,91411,108397],"is_not":false,"summary":null,"term":"GO:0031389"}]},"cv_name":"cellular_component","definition":"A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.","definition_xrefs":["PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Rad17 RFC-like complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RFC (Rad17)","type":"exact"},{"name":"Rad17-RFC","type":"exact"},{"name":"Rad17-RLC","type":"exact"},{"name":"Rad24p RFC-like complex","type":"exact"}],"termid":"GO:0031389","terms_by_termid":{"GO:0031389":null}}


id: PBO:0017500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family mitochondrial protein (predicted)","termid":"PBO:0017500"}


id: GO:0009407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0098754","GO:0044248"],"is_obsolete":false,"name":"toxin catabolic process","synonyms":[{"name":"toxin degradation","type":"exact"},{"name":"toxin breakdown","type":"exact"},{"name":"toxin catabolism","type":"exact"}],"termid":"GO:0009407"}


id: PBO:0070730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a","termid":"PBO:0070730"}


id: PBO:0046756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 8","termid":"PBO:0046756"}


id: GO:1904947
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103683],"is_not":false,"summary":null,"term":"GO:1904947"}]},"cv_name":"biological_process","definition":"The process in which folic acid is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GO_REF:0000075","PMID:15140890","GOC:rph","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"folate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"folic acid import into mitochondrion","type":"related"}],"termid":"GO:1904947","terms_by_termid":{"GO:1904947":null}}


id: GO:0051536
data:
  {"annotated_genes":["SJAG_03658","SJAG_04054","SJAG_02495","SJAG_01058","SJAG_03724","SJAG_02994","SJAG_04736","SJAG_00260","SJAG_03862","SJAG_00186","SJAG_00153","SJAG_00532","SJAG_02627","SJAG_04265","SJAG_01630","SJAG_04016","SJAG_02016","SJAG_03588","SJAG_05280","SJAG_02261","SJAG_02497","SJAG_04098","SJAG_03553","SJAG_01417","SJAG_01644","SJAG_01935","SJAG_01574","SJAG_04397","SJAG_02818","SJAG_03701","SJAG_02474","SJAG_00217","SJAG_04085","SJAG_00822","SJAG_00244","SJAG_03222","SJAG_03322","SJAG_00455","SJAG_01841","SJAG_00601","SJAG_00792","SJAG_05027","SJAG_04183","SJAG_04639","SJAG_04756","SJAG_03243","SJAG_02908","SJAG_00995","SJAG_02895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85051,87799,89097,89328,90213,93309,99535,102999,113951],"is_not":false,"summary":null,"term":"GO:0051536"},{"annotations":[110223,111171,84258,105370,103535,105989,89327,89095,113950,96612,97736,86853,91197,100609,110863,85004,112759,110005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051537"},{"annotations":[85005,97655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051538"},{"annotations":[100287,83963,91613,101440,92822,92291,95439,103473,101357,105237,105371,94221,109577,91010,108811,90604,100879,96161,110224,85006,95067,101687,109949,96954,107707,88317,105835,110885,105990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051539"}]},"cv_name":"molecular_function","definition":"Binding to an iron-sulfur cluster, a combination of iron and sulfur atoms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cluster binding","termid":"GO:0051540"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00186":null,"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00792":null,"SJAG_00822":null,"SJAG_00995":null,"SJAG_01058":null,"SJAG_01417":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01644":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02261":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_02895":null,"SJAG_02908":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03243":null,"SJAG_03322":null,"SJAG_03553":null,"SJAG_03588":null,"SJAG_03658":null,"SJAG_03701":null,"SJAG_03724":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04085":null,"SJAG_04098":null,"SJAG_04183":null,"SJAG_04265":null,"SJAG_04397":null,"SJAG_04639":null,"SJAG_04736":null,"SJAG_04756":null,"SJAG_05027":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"iron-sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Fe/S binding","type":"exact"},{"name":"iron sulfur cluster binding","type":"exact"},{"name":"iron sulphur cluster binding","type":"exact"},{"name":"iron-sulphur cluster binding","type":"exact"}],"termid":"GO:0051536","terms_by_termid":{"GO:0051536":null,"GO:0051537":null,"GO:0051538":null,"GO:0051539":null}}


id: PR:O43025
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC354.11c gene.","definition_xrefs":["UniProtKB:O43025","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C354.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.11c","synonyms":[{"name":"Spom972h-SPBC354.11c","type":"exact"}],"termid":"PR:O43025"}


id: RO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of preys on","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preyed_upon_by","termid":"RO:0002458"}


id: PBO:0059192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member G","termid":"PBO:0059192"}


id: PBO:0079399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 6","termid":"PBO:0079399"}


id: PBO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse MRP","termid":"PBO:0000857"}


id: GO:0060653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland cord. Epithelial cells of the mammary cord give it its funnel-like shape and some are cornified.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland cord morphogenesis","synonyms":[{"name":"epithelial cell differentiation involved in mammary gland sprout morphogenesis","type":"related"}],"termid":"GO:0060653"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN","EC:4.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: PBO:0042926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 5","termid":"PBO:0042926"}


id: GO:0060283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of oocyte development","termid":"GO:0060281"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oocyte development","termid":"GO:0060283"}


id: GO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric distal convoluted tubule cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell development","termid":"GO:0072140"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell development","synonyms":[{"name":"metanephric distal convoluted tubule cell development","type":"exact"}],"termid":"GO:0072241"}


id: PBO:0072319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 5","termid":"PBO:0072319"}


id: PBO:0067019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 32, pseudogene","termid":"PBO:0067019"}


id: GO:0005095
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112429],"is_not":false,"summary":null,"term":"GO:0005095"}]},"cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0140678","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"GTPase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GIP","type":"broad"}],"termid":"GO:0005095","terms_by_termid":{"GO:0005095":null}}


id: PBO:0005442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase (predicted)","termid":"PBO:0005442"}


id: PBO:0038437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 3","termid":"PBO:0038437"}


id: PBO:0070032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1329, pseudogene","termid":"PBO:0070032"}


id: MOD:00455
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+6amu) form group.","definition_xrefs":["Unimod:62","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+6amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(6)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+6amu), N-term & K","type":"related"}],"termid":"MOD:00455"}


id: FYPO:0004363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell differs from normal (i.e. is higher or lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"abnormal level of stress responsive gene mRNA during vegetative growth","type":"exact"},{"name":"altered level of cellular response to stress responsive gene mRNA","type":"exact"},{"name":"altered level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"altered level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"altered level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"altered mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"altered stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004363"}


id: PR:P36623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.06","secondary_identifiers":["UniProtKB:P36623"],"synonyms":[{"name":"BPG-dependent PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoglyceromutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.06","type":"related"},{"name":"Spom972h-gpmA","type":"exact"}],"termid":"PR:P36623"}


id: GO:0000036
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94409],"is_not":false,"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding an acyl group and presenting it for processing or offloading to a cognate enzyme. Covalently binds the acyl group via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The acyl carrier protein (ACP) presents substrates to enzymes involved in fatty acid biosynthesis or in polyketide secondary metabolite biosynthesis.","definition_xrefs":["GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ACP phosphopantetheine attachment site binding","termid":"GO:0044620"},{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0140104"],"is_obsolete":false,"name":"acyl carrier activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0000036","terms_by_termid":{"GO:0000036":null}}


id: PBO:0055896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 17","termid":"PBO:0055896"}


id: GO:1901973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to proline.","definition_xrefs":["PMID:7730362","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proline binding","termid":"GO:1901973"}


id: PR:Q9P7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gea1 gene.","definition_xrefs":["UniProtKB:Q9P7R8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.03c","synonyms":[{"name":"Spom972h-gea1","type":"exact"}],"termid":"PR:Q9P7R8"}


id: PBO:0075409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 6","termid":"PBO:0075409"}


id: PBO:0063033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 1","termid":"PBO:0063033"}


id: GO:0038101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a nodal protein in the extracellular region, and inhibiting nodal signaling by preventing nodal from binding to its cell surface receptor.","definition_xrefs":["PMID:14570583","PMID:15062104","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"part_of","term_name":"negative regulation of nodal signaling pathway","termid":"GO:1900108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of nodal from receptor via nodal binding","synonyms":[{"name":"nodal antagonist activity","type":"broad"},{"name":"binding to and sequestering nodal","type":"exact"},{"name":"extracellular regulation of nodal","type":"broad"}],"termid":"GO:0038101"}


id: PBO:0057867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3178","termid":"PBO:0057867"}


id: GO:0001018
data:
  {"annotated_genes":["SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91282],"is_not":false,"summary":null,"term":"GO:0001018"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region that controls the transcription of the mitochondrial DNA.","definition_xrefs":["GOC:txnOH","GOC:vw","PMID:20056105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000997","GO:0001044","GO:0001045","GO:0070362","GO:0070363","GO:0070364","GO:0070361"],"synonyms":[{"name":"HSP coding strand binding","type":"narrow"},{"name":"HSP non-coding strand binding","type":"narrow"},{"name":"HSPas binding","type":"narrow"},{"name":"HSPs binding","type":"narrow"},{"name":"LSP coding strand binding","type":"narrow"},{"name":"LSP non-coding strand binding","type":"narrow"},{"name":"LSPas binding","type":"narrow"},{"name":"LSPs binding","type":"narrow"},{"name":"mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase core promoter sequence-specific DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase regulatory region DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase regulatory region sequence-specific DNA binding","type":"related"},{"name":"mitochondrial heavy strand promoter anti-sense binding","type":"narrow"},{"name":"mitochondrial heavy strand promoter sense binding","type":"narrow"},{"name":"mitochondrial light strand promoter anti-sense binding","type":"narrow"},{"name":"mitochondrial light strand promoter sense binding","type":"narrow"},{"name":"mitochondrial proximal promoter sequence-specific DNA binding","type":"related"}],"termid":"GO:0001018","terms_by_termid":{"GO:0001018":null}}


id: PBO:0079693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 1","termid":"PBO:0079693"}


id: PBO:0084229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huge dynein-related AAA-type ATPase (midasin); forms extended pre-60S particle with the Rix1 complex; involved with interaction partners Rsa4p and Ytm1p, in the ATP-dependent remodeling of the pre-60S particle at successive maturation steps during ribosomal biogenesis; involved in the removal of biogenesis factors including GTPase Nog2p prior to nuclear export; contains a hexameric AAA-motor head domain and a long flexible tail with a MIDAS (metal ion-dependent adhesion site) domain","termid":"PBO:0084229"}


id: SO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the final codon of an incompletely annotated transcript is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_terminal_codon_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:incomplete_terminal_codon_variant","type":"exact"},{"name":"incomplete terminal codon variant","type":"exact"},{"name":"partial_codon","type":"exact"}],"termid":"SO:0001626"}


id: PBO:0079244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 17","termid":"PBO:0079244"}


id: PBO:0027831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascospore_release_from_ascus","termid":"PBO:0027831"}


id: PBO:0058078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4296","termid":"PBO:0058078"}


id: GO:0045639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"positively_regulates","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid cell differentiation","synonyms":[{"name":"activation of myeloid cell differentiation","type":"narrow"},{"name":"stimulation of myeloid cell differentiation","type":"narrow"},{"name":"up regulation of myeloid cell differentiation","type":"exact"},{"name":"up-regulation of myeloid cell differentiation","type":"exact"},{"name":"upregulation of myeloid cell differentiation","type":"exact"}],"termid":"GO:0045639"}


id: PBO:0005135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not2 (predicted)","termid":"PBO:0005135"}


id: PBO:0055818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing preferred translocation partner in lipoma","termid":"PBO:0055818"}


id: PBO:0045281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 32","termid":"PBO:0045281"}


id: PBO:0070611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 79","termid":"PBO:0070611"}


id: GO:0038023
data:
  {"annotated_genes":["SJAG_01345","SJAG_01699","SJAG_02258","SJAG_02823","SJAG_02860","SJAG_02080","SJAG_01978","SJAG_02847"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92333,98902,101644],"is_not":false,"summary":null,"term":"GO:0038023"},{"annotations":[115210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"},{"annotations":[111645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[93193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[84339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"},{"annotations":[104569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140897"}]},"cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.","definition_xrefs":["GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null,"SJAG_02080":null,"SJAG_02258":null,"SJAG_02823":null,"SJAG_02847":null,"SJAG_02860":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"signaling receptor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:23873862":null},"secondary_identifiers":["GO:0004872","GO:0019041"],"synonyms":[{"name":"receptor activity","type":"broad"},{"name":"receptor activity involved in signal transduction","type":"exact"},{"name":"signalling receptor activity","type":"exact"}],"termid":"GO:0038023","terms_by_termid":{"GO:0004932":null,"GO:0009882":null,"GO:0036320":null,"GO:0038023":null,"GO:0140897":null,"GO:1990576":null}}


id: PBO:0084375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long chain fatty acyl-CoA synthetase; activates fatty acids with a preference for C12:0-C16:0 chain lengths; role in the competitive import of long-chain fatty acids and sphingoid long-chain bases; accounts for most acyl-CoA synthetase activity; localizes to lipid particles and the plasma membrane; role in sphingolipid-to-glycerolipid metabolism; forms ER foci upon replication stress; faa1 faa4 double null complemented by any of human ACSBG1, ACSL1, 3, 4, 5, 6, SLC27A2, or 4","termid":"PBO:0084375"}


id: GO:0007616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-term memory","secondary_identifiers":["Wikipedia:Long-term_memory"],"termid":"GO:0007616"}


id: GO:1903534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GO_REF:0000058","PMID:12018418","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of lactose biosynthetic process","synonyms":[{"name":"regulation of lactose anabolism","type":"exact"},{"name":"regulation of lactose biosynthesis","type":"exact"},{"name":"regulation of lactose formation","type":"exact"},{"name":"regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903534"}


id: PBO:0052769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 61","termid":"PBO:0052769"}


id: GO:1905824
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112799],"is_not":false,"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["PMID:18765790","GOC:TermGenie","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid arm separation","termid":"GO:1905822"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic sister chromatid arm separation","type":"narrow"},{"name":"up regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"up-regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"upregulation of mitotic sister chromatid arm separation","type":"exact"}],"termid":"GO:1905824","terms_by_termid":{"GO:1905824":null}}


id: PBO:0049561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 27, pseudogene","termid":"PBO:0049561"}


id: PBO:0072795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 1","termid":"PBO:0072795"}


id: PBO:0018176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Hst2","termid":"PBO:0018176"}


id: FYPO:0001225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"monoseptate","synonyms":[{"name":"monoseptate during mitotic cell cycle","type":"related"},{"name":"monoseptate during vegetative growth","type":"exact"}],"termid":"FYPO:0001225"}


id: GO:0015836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipid-linked peptidoglycans into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transport","termid":"GO:0015835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipid-linked peptidoglycan transport","synonyms":[{"name":"lipid-linked murein transport","type":"exact"}],"termid":"GO:0015836"}


id: GO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(in) + ATP = Me2+(out) + ADP + phosphate, where Me is Zn2+, Cd2+, Co2+, Ni2+ or Pb2+.","definition_xrefs":["TC:3.A.3.6.2"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity (obsolete GO:0008552)","synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"exact"}],"termid":"GO:0008552"}


id: PBO:0076840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 7","termid":"PBO:0076840"}


id: PBO:0068153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 460","termid":"PBO:0068153"}


id: PBO:0090005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial holo-[acyl-carrier-protein] synthase Ppt2","termid":"PBO:0090005"}


id: PBO:0064194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 2","termid":"PBO:0064194"}


id: PR:A6X970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.04c","synonyms":[{"name":"Spom972h-SPAC23C4.04c","type":"exact"}],"termid":"PR:A6X970"}


id: PBO:0064625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase 1","termid":"PBO:0064625"}


id: PBO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component End3","termid":"PBO:0090159"}


id: _global:directly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly regulates q iff p is immediately causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"_global:immediately_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","secondary_identifiers":["RO:0002578"],"termid":"_global:directly_regulates"}


id: FYPO:0003591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a protein complex is abnormal. The protein whose binding to the protein complex is affected may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"abnormal protein complex binding","termid":"FYPO:0003591"}


id: FYPO:0007037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phenylglyoxal. Cells stop growing (and may die) at a concentration of phenylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to phenylglyoxal","synonyms":[{"name":"hypersensitive to phenylglyoxal","type":"exact"},{"name":"sensitive to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"sensitive to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to phenylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0007037"}


id: MOD:00001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an alkyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylated residue","synonyms":[{"name":"AlkylRes","type":"exact"}],"termid":"MOD:00001"}


id: PBO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-reversed_RTS1_barrier_polarity","termid":"PBO:0033783"}


id: GO:0046812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the surface of a host cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"host cell surface binding","termid":"GO:0046812"}


id: GO:0044460
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a flagellum, a long whiplike or feathery structure borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum part (obsolete GO:0044460)","synonyms":[{"name":"flagellum component","type":"exact"},{"name":"flagellum part","type":"exact"}],"termid":"GO:0044460"}


id: CHEBI:16907
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitroquinoline N-oxide","termid":"CHEBI:16907"}


id: PBO:0081055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 12","termid":"PBO:0081055"}


id: PBO:0073460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A3, pseudogene","termid":"PBO:0073460"}


id: PBO:0067740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 39","termid":"PBO:0067740"}


id: PBO:0087441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit G of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; involved in vacuolar acidification; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087441"}


id: GO:0150037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium-dependent activation of synaptic vesicle fusion.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:27052163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"regulates","term_name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0150037"}


id: GO:0008296
data:
  {"annotated_genes":["SJAG_02908","SJAG_02818","SJAG_01163","SJAG_05373","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101339,105236],"is_not":false,"summary":null,"term":"GO:0008296"},{"annotations":[84745,106080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[84748,103476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01163":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0004527","GO:0140097","GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3'-5'-DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9023943"],"synonyms":[{"name":"3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"3'-5'-exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0008296","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null}}


id: PBO:0029263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_cell_with_central_constriction","termid":"PBO:0029263"}


id: PBO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2)","termid":"PBO:0015212"}


id: GO:0006074
data:
  {"annotated_genes":["SJAG_01290","SJAG_04771","SJAG_04483","SJAG_00610","SJAG_04462","SJAG_01835","SJAG_01288","SJAG_02222","SJAG_00876","SJAG_00218","SJAG_03705","SJAG_04668","SJAG_05285","SJAG_03587","SJAG_01787","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[87738,84264,105427,109289,102213,103899,87728,111937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[88557],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83708,88560],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[98974,113998,88546,88562,101452,86935],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan metabolic process","type":"broad"},{"name":"1,3-beta-D-glucan metabolism","type":"exact"},{"name":"1,3-beta-glucan metabolic process","type":"broad"},{"name":"beta-1,3 glucan metabolic process","type":"exact"},{"name":"beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0006074","terms_by_termid":{"GO:0034413":null,"GO:0060635":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPK antisense RNA 1","termid":"PBO:0050429"}


id: PBO:0052460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 8 pseudogene 1","termid":"PBO:0052460"}


id: FYPO:0003244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome takes place normally for some, but is decreased for other, specific introns.","definition_xrefs":["PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome","termid":"FYPO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome, intron-specific","synonyms":[{"name":"differential pre-mRNA splicing defects","type":"exact"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"intron-specific abnormal nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"intron-specific mRNA splicing defects","type":"exact"}],"termid":"FYPO:0003244"}


id: PBO:0063304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCF11 cleavage and polyadenylation factor subunit","termid":"PBO:0063304"}


id: GO:1902291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-dependent DNA replication DNA ligation","termid":"GO:0051104"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"cell cycle DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902291"}


id: PBO:0030603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mistimed_mitosis","termid":"PBO:0030603"}


id: PBO:0074583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2B","termid":"PBO:0074583"}


id: GO:0003195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the tricuspid valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve formation","termid":"GO:0003190"},{"relation_name":"part_of","term_name":"tricuspid valve morphogenesis","termid":"GO:0003186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve formation","termid":"GO:0003195"}


id: FYPO:0003334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to septin ring","synonyms":[{"name":"normal protein localisation to septin ring","type":"exact"},{"name":"normal protein localization to septin ring during mitotic cell cycle","type":"related"},{"name":"normal protein localization to septin ring during vegetative growth","type":"exact"}],"termid":"FYPO:0003334"}


id: GO:2000108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"positively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte apoptotic process","synonyms":[{"name":"positive regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000108"}


id: GO:0031247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of actin rods, a cellular structure consisting of parallel, hexagonally arranged actin tubules.","definition_xrefs":["PMID:14706699","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin rod assembly","synonyms":[{"name":"actin rod formation","type":"related"}],"termid":"GO:0031247"}


id: GO:0031823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1D serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1D serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1D receptor binding","type":"exact"},{"name":"type 1D serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031823"}


id: GO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal cell signaling","synonyms":[{"name":"epithelial-mesenchymal cell signalling","type":"exact"}],"termid":"GO:0060684"}


id: PBO:0003459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85 (predicted)","termid":"PBO:0003459"}


id: PBO:0028762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytoplasmic_translational_initiation","termid":"PBO:0028762"}


id: GO:0048078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of eye pigmentation","termid":"GO:0048075"},{"relation_name":"is_a","term_name":"regulation of compound eye pigmentation","termid":"GO:0048076"},{"relation_name":"positively_regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"broad"},{"name":"positive regulation of eye pigmentation","type":"broad"},{"name":"stimulation of eye pigmentation","type":"broad"},{"name":"up regulation of eye pigmentation","type":"broad"},{"name":"up-regulation of eye pigmentation","type":"broad"},{"name":"upregulation of eye pigmentation","type":"broad"}],"termid":"GO:0048078"}


