# terms

id: PBO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (predicted)","termid":"PBO:0004492"}


id: PBO:0085030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase base subunit of the 19S RP of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein-protein interactions; RP is the acronym for regulatory particle","termid":"PBO:0085030"}


id: GO:0090422
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99772],"is_not":false,"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of thiamine pyrophosphate a substance from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"thiamine transmembrane transporter activity","termid":"GO:0015234"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"thiamine pyrophosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8875838"],"synonyms":[{"name":"thiamine diphosphate transporter activity","type":"exact"},{"name":"thiamine pyrophosphate transporter activity","type":"narrow"}],"termid":"GO:0090422","terms_by_termid":{"GO:0090422":null}}


id: MOD:01933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links four L-lysine residues to form desmosine.","definition_xrefs":["ChEBI:37629","PubMed:14109938","PubMed:5839176","RESID:AA0587","PubMed:14109939","PubMed:13941623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmosine","synonyms":[{"name":"4-[(4S)-4-amino-4-carboxybutyl]-1-[(5S)-5-amino-5-carboxypentyl]-3,5-bis[(3S)-3-amino-3-carboxypropyl]pyridinium","type":"exact"},{"name":"6-[4-(4-amino-4-carboxybutyl)-3,5-bis(3-amino-3-carboxypropyl)pyridinio]norleucine","type":"exact"},{"name":"desmosine","type":"exact"}],"termid":"MOD:01933"}


id: GO:0007200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of phospholipase C (PLC) and a subsequent increase in the intracellular concentration of inositol trisphosphate (IP3) and diacylglycerol (DAG).","definition_xrefs":["GOC:dph","GOC:signaling","GOC:tb","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"PLC-activating GPCR signaling pathway","type":"exact"},{"name":"activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:0007200"}


id: PBO:0003708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 2 (predicted)","termid":"PBO:0003708"}


id: GO:1901622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smoothened signaling pathway","termid":"GO:0045880"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"activation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901622"}


id: GO:0030958
data:
  {"annotated_genes":["SJAG_03916","SJAG_03042","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87419,108330,114171],"is_not":false,"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"A protein complex required for heterochromatin assembly; contains an Argonaute homolog, a chromodomain protein, and at least one additional protein; named for RNA-induced initiation of transcriptional gene silencing.","definition_xrefs":["PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_03916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"RITS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030958","terms_by_termid":{"GO:0030958":null}}


id: GO:0097610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A furrow that may be found on the cell surface. Examples include the cingulum and sulcus found in some dinoflagellates.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"cell surface furrow","synonyms":[{"name":"cell surface groove","type":"related"},{"name":"furrow","type":"broad"},{"name":"groove","type":"broad"}],"termid":"GO:0097610"}


id: GO:0090517
data:
  {"annotated_genes":["SJAG_02029","SJAG_03256","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99968,106148],"is_not":false,"summary":null,"term":"GO:0090517"},{"annotations":[98930,99967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine transport","termid":"GO:0015819"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane import into vacuole","termid":"GO:0034490"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-lysine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090456"],"synonyms":[{"name":"lysine transmembrane import into vacuole","type":"broad"},{"name":"vacuolar lysine import","type":"broad"}],"termid":"GO:0090517","terms_by_termid":{"GO:0090517":null,"GO:1901482":null}}


id: PBO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Y member 1","termid":"PBO:0062061"}


id: GO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of folate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to folate","termid":"GO:0043326"}


id: GO:0047554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-2H-pyran-4,6-dicarboxylate + H2O = 4-carboxy-2-hydroxyhexa-2,4-dienedioate + H+.","definition_xrefs":["EC:3.1.1.57","RHEA:10644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-pyrone-4,6-dicarboxylate lactonase activity","secondary_identifiers":["MetaCyc:RXN-2462","KEGG_REACTION:R04277"],"synonyms":[{"name":"2-pyrone-4,6-dicarboxylate lactonohydrolase activity","type":"related"}],"termid":"GO:0047554"}


id: GO:2000928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cellodextrin metabolic process","termid":"GO:2000925"},{"relation_name":"is_a","term_name":"regulation of cellodextrin catabolic process","termid":"GO:2000927"},{"relation_name":"negatively_regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellodextrin catabolic process","synonyms":[{"name":"negative regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000928"}


id: PBO:0111888
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT hook protein","termid":"PBO:0111888"}


id: PBO:0079485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXN2 pseudogene 1","termid":"PBO:0079485"}


id: GO:0046089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"cytosine biosynthetic process","synonyms":[{"name":"cytosine anabolism","type":"exact"},{"name":"cytosine biosynthesis","type":"exact"},{"name":"cytosine formation","type":"exact"},{"name":"cytosine synthesis","type":"exact"}],"termid":"GO:0046089"}


id: GO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [elongation factor 2] = ADP + [elongation factor 2] phosphate.","definition_xrefs":["MetaCyc:2.7.11.20-RXN","EC:2.7.11.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0004672","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"elongation factor-2 kinase activity","secondary_identifiers":["RHEA:21436"],"synonyms":[{"name":"ATP:elongation factor 2 phosphotransferase activity","type":"related"},{"name":"Ca/CaM-kinase III activity","type":"related"},{"name":"CaM kinase III activity","type":"related"},{"name":"EF2K","type":"related"},{"name":"STK19","type":"related"},{"name":"calmodulin-dependent protein kinase III activity","type":"related"},{"name":"eEF-2 kinase activity","type":"exact"},{"name":"eEF2 kinase activity","type":"related"},{"name":"eEF2K","type":"related"},{"name":"elongation factor 2 kinase activity","type":"related"},{"name":"eukaryotic elongation factor 2 kinase activity","type":"related"}],"termid":"GO:0004686"}


id: GO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a polysaccharide and transmitting the signal to initiate an innate immune response. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"polysaccharide immune receptor activity","synonyms":[{"name":"polysaccharide receptor activity","type":"broad"}],"termid":"GO:0001873"}


id: PBO:0091254
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CHS3","termid":"PBO:0091254"}


id: GO:0033048
data:
  {"annotated_genes":["SJAG_04999","SJAG_01297","SJAG_01082","SJAG_03126","SJAG_04699","SJAG_01837","SJAG_00883","SJAG_04126","SJAG_00460","SJAG_02451","SJAG_04259","SJAG_01679","SJAG_04884","SJAG_03353","SJAG_02336","SJAG_02169","SJAG_03681","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109908,100022,86888,104373,108081,110390,112019,103350,95716],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[109912,112793,97923,102428,111668,95564,86890,110619,106033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[102429,111669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90344],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112797],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90345],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sister chromatid segregation","termid":"GO:0033046"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"negatively_regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033048","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: PBO:0110826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, glucose starvation sensing, Rst2","termid":"PBO:0110826"}


id: GO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide biosynthetic process","termid":"GO:0043607"}


id: PBO:0088123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar integral membrane protein required for efflux of amino acids; required for efflux of amino acids during autophagic body breakdown in the vacuole; null mutation causes a gradual loss of viability during starvation","termid":"PBO:0088123"}


id: PBO:0073048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 6","termid":"PBO:0073048"}


id: PBO:0084484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis specific DNA helicase; involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control; catalyzes the unwinding of Holliday junctions; has ssDNA and dsDNA stimulated ATPase activity","termid":"PBO:0084484"}


id: PBO:0068592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 43, pseudogene","termid":"PBO:0068592"}


id: GO:0008840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-aspartate-4-semialdehyde = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H2O.","definition_xrefs":["RHEA:34171","PMID:8993314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate synthase activity","secondary_identifiers":["KEGG_REACTION:R02292","MetaCyc:DIHYDRODIPICSYN-RXN","EC:4.3.3.7"],"synonyms":[{"name":"DHDPS activity","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase (adding pyruvate and cyclizing)","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase [adding pyruvate and cyclizing; (S)-2,3-dihydropyridine-2,6-dicarboxylate-forming]","type":"related"},{"name":"dihydrodipicolinate synthase activity","type":"exact"},{"name":"dihydrodipicolinate synthetase activity","type":"related"},{"name":"dihydrodipicolinic acid synthase activity","type":"related"}],"termid":"GO:0008840"}


id: GO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a pilus, a proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pilus part (obsolete GO:0044443)","synonyms":[{"name":"fimbrial part","type":"exact"},{"name":"fimbrium component","type":"exact"},{"name":"pilus component","type":"exact"}],"termid":"GO:0044443"}


id: GO:0072309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of mesenchymal stem cells that contributes to the shaping of a nephron in the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"}


id: PBO:0062965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 8","termid":"PBO:0062965"}


id: PBO:0088699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Pet117","termid":"PBO:0088699"}


id: PBO:0012042
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae fen2","termid":"PBO:0012042"}


id: PBO:0052399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kin17 DNA and RNA binding protein","termid":"PBO:0052399"}


id: GO:0071561
data:
  {"annotated_genes":["SJAG_01116","SJAG_04552","SJAG_04221","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98254,102434,103142,111321],"is_not":false,"summary":null,"term":"GO:0071561"}]},"cv_name":"cellular_component","definition":"An organelle membrane contact site formed between the vacuole membrane and the outer nuclear membrane. In S. cerevisiae these contacts are mediated through direct physical interaction between Vac8p and Nvj1p.","definition_xrefs":["GOC:jp","PMID:16709156","PMID:16806880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01329":null,"SJAG_04221":null,"SJAG_04552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nucleus-vacuole junction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NV junction","type":"exact"},{"name":"NVJ","type":"exact"},{"name":"nucleus-vacuole membrane contact site","type":"exact"}],"termid":"GO:0071561","terms_by_termid":{"GO:0071561":null}}


id: SO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the loss of a polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_loss_of_function_variant","synonyms":[{"name":"polypeptide loss of function variant","type":"exact"}],"termid":"SO:0001559"}


id: GO:1990425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated calcium-release channel complex of the sarcoplasmic or endoplasmic reticulum. It plays an important role in the excitation-contraction (E-C) coupling of muscle cells. RyR comprises a family of ryanodine receptors, widely expressed throughout the animal kingdom.","definition_xrefs":["PMID:22822064","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel complex","termid":"GO:0005891"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991","GO:0005789","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"ryanodine receptor complex","synonyms":[{"name":"RyR","type":"related"}],"termid":"GO:1990425"}


id: GO:0106125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A matrix composed of planar membranes, vesicles and lipid inclusions within the reservosome.","definition_xrefs":["PMID:15521631","PMID:19288526","GOC:ach","PMID:12204365","PMID:18452191","PMID:21818313","PMID:22425988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"reservosome matrix","termid":"GO:0106125"}


id: PBO:0073004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 4","termid":"PBO:0073004"}


id: GO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"myosin filament assembly","synonyms":[{"name":"myosin polymerization","type":"related"}],"termid":"GO:0031034"}


id: PBO:0045964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 3","termid":"PBO:0045964"}


id: GO:0032682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"negatively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine production","secondary_identifiers":["GO:0090198","GO:0045079"],"synonyms":[{"name":"down regulation of chemokine production","type":"exact"},{"name":"down-regulation of chemokine production","type":"exact"},{"name":"downregulation of chemokine production","type":"exact"},{"name":"inhibition of chemokine production","type":"narrow"},{"name":"negative regulation of chemokine biosynthetic process","type":"narrow"},{"name":"negative regulation of chemokine secretion","type":"narrow"}],"termid":"GO:0032682"}


id: GO:0090516
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99969],"is_not":false,"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine transport","termid":"GO:0015825"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-serine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090516","terms_by_termid":{"GO:0090516":null}}


id: SO:0000513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_cluster","synonyms":[{"name":"J cluster","type":"exact"},{"name":"J-CLUSTER","type":"exact"}],"termid":"SO:0000513"}


id: GO:0043636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bisphenol A, 4,4'-(propane-2,2-diyl)diphenol, a synthetic, aromatic organic compound used as a monomer in the manufacture of polycarbonate plastic and in the manufacture of epoxy resins.","definition_xrefs":["GOC:jl","Wikipedia:Bisphenol_A"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"bisphenol A catabolic process","synonyms":[{"name":"bisphenol-A catabolic process","type":"exact"},{"name":"bisphenol-A catabolism","type":"exact"}],"termid":"GO:0043636"}


id: PBO:0087788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfonate and inorganic sulfur transporter; low affinity sulfate, high affinity sulfite, thiosulfite and major sulfonate transporter; functions as a an H+ symporter; similar to the allantoate permease (Dal5p) subfamily of the major facilitator superfamily; mRNA expression is elevated by sulfur limitation; non-essential gene","termid":"PBO:0087788"}


id: GO:0060187
data:
  {"annotated_genes":["SJAG_01071","SJAG_02062","SJAG_02566","SJAG_02838","SJAG_01983","SJAG_03432","SJAG_02322","SJAG_00264","SJAG_00030","SJAG_02511","SJAG_03581","SJAG_04509","SJAG_04829","SJAG_02392","SJAG_00610","SJAG_04828","SJAG_01943","SJAG_03119","SJAG_04982","SJAG_03444","SJAG_04479","SJAG_03748","SJAG_04878","SJAG_03915","SJAG_00773","SJAG_00700","SJAG_01799","SJAG_03746","SJAG_02576","SJAG_04706","SJAG_00514","SJAG_04690","SJAG_00800","SJAG_00724","SJAG_03705","SJAG_02132","SJAG_02004","SJAG_04620","SJAG_02087","SJAG_00993","SJAG_04887","SJAG_05285","SJAG_01978","SJAG_02333","SJAG_00162","SJAG_02581","SJAG_04980","SJAG_04624","SJAG_03453","SJAG_02278","SJAG_02684","SJAG_03536","SJAG_04322","SJAG_01754","SJAG_05179","SJAG_00063","SJAG_03608","SJAG_04058","SJAG_01894","SJAG_01456","SJAG_01885","SJAG_00870","SJAG_04765","SJAG_02368","SJAG_00236","SJAG_03145","SJAG_04787","SJAG_00331","SJAG_04012","SJAG_05264","SJAG_02320","SJAG_04931","SJAG_01631","SJAG_00368","SJAG_01888","SJAG_03646","SJAG_03126","SJAG_04044","SJAG_00677","SJAG_02716","SJAG_00317","SJAG_02572","SJAG_01732","SJAG_00152","SJAG_00805","SJAG_02258","SJAG_00280","SJAG_02412","SJAG_03246","SJAG_00575","SJAG_04315","SJAG_01017","SJAG_03938","SJAG_04960","SJAG_03380","SJAG_00938","SJAG_02075","SJAG_02331","SJAG_03606","SJAG_01898","SJAG_00652","SJAG_02379","SJAG_01171","SJAG_02700","SJAG_01437","SJAG_02351","SJAG_04935","SJAG_03353","SJAG_03754","SJAG_02924","SJAG_01268","SJAG_01215","SJAG_04455","SJAG_01167","SJAG_00587","SJAG_00661","SJAG_02916","SJAG_00018","SJAG_04637","SJAG_05001","SJAG_00667","SJAG_01388","SJAG_01718","SJAG_01360","SJAG_03379","SJAG_01993","SJAG_01196","SJAG_02104","SJAG_03172","SJAG_01925","SJAG_01448","SJAG_04462","SJAG_03229","SJAG_04595","SJAG_04258","SJAG_04905","SJAG_04771","SJAG_04591","SJAG_00140","SJAG_01345","SJAG_02152","SJAG_00268","SJAG_03357","SJAG_02695","SJAG_01373","SJAG_00104","SJAG_01350","SJAG_03086","SJAG_03331","SJAG_02718","SJAG_03025","SJAG_04358","SJAG_03655","SJAG_01095","SJAG_02968","SJAG_03753","SJAG_02277","SJAG_03596","SJAG_01738","SJAG_03486","SJAG_00521","SJAG_04724","SJAG_04781","SJAG_00397","SJAG_02241","SJAG_02943","SJAG_04100","SJAG_04666","SJAG_00851","SJAG_01794","SJAG_02169","SJAG_02114","SJAG_02338","SJAG_02486","SJAG_04050","SJAG_04776","SJAG_04051","SJAG_03643","SJAG_01770","SJAG_02957","SJAG_01290","SJAG_00137","SJAG_02760","SJAG_00434","SJAG_03637","SJAG_03760","SJAG_00185","SJAG_04703","SJAG_01114","SJAG_02602","SJAG_04668","SJAG_00845","SJAG_04723","SJAG_03625","SJAG_01118","SJAG_04268","SJAG_01835","SJAG_02753","SJAG_01288","SJAG_01189","SJAG_05290","SJAG_04566","SJAG_02045","SJAG_01787","SJAG_02222","SJAG_01964","SJAG_02729","SJAG_03011","SJAG_00596","SJAG_01353","SJAG_00589","SJAG_01453","SJAG_02380","SJAG_04001","SJAG_00424","SJAG_01855","SJAG_02166","SJAG_02989","SJAG_04901","SJAG_02228","SJAG_04673","SJAG_00333","SJAG_05198","SJAG_02529","SJAG_01003","SJAG_02797","SJAG_00216","SJAG_00445","SJAG_01384","SJAG_00028","SJAG_02657","SJAG_00101","SJAG_00546","SJAG_02202","SJAG_01660","SJAG_04609","SJAG_03375","SJAG_01697"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89699,91984,93001,103151,102963,92407,87521,92443,87218,96294,90712,84342,102203,114714,98779,93862,99374,99615,86903,83718,91343,99870,109169,91505,84654,110153,96015,104453,95860,100752,103126,99823,113988,110269,91556,88042,106876,84246,83701,84068,106981,86996,108421,97051,86926,112596,99091,86024,106224,90001,98760,112291,109200,95105,93111,94963,85506,107476,107772,107986],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051285"},{"annotations":[93344,90713,102204,109170,108066,84069,112597,110270,86025,111923,114906,112292,88549,113989,86904,114715,86876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[108067,97052,113990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140472"},{"annotations":[106983,88469,103128,98041,96324,86644,112949,90715,104482,107487,94950,108423,91558,86636,111751,89613,84329,109785,110054,114867,108892,89873,104411,98968,105179,100724,103340,91847,87621,96519,86878,88324,98781,100835,111574,86643,84431,105493,112202,93687,84071,105640,86642,83720,99438,91391,88249,101731,110155,110272,111925,86640,90003,84448,103274,91087,85781,105648,102381,87284,107587,97875,86027,91136,86906,88410,93168,99376,108069,110439,114407,93112,114941,115052,114828,85995,110492,86641,97469,103299,114908,83702,84812,84945,86380,113817,86639,85542,109957,91077,87307,85877,102589,98762,98864,87118,89792,94373,95714,102966,105558,106878,107544,85135,97045,89160,84181,98352,97593,109335,115313,90528,104177,99655,114950,109122,114611,99825,107793,109788,109896,101280,88837,115356,91986,101450,107612,86637,102206,106291,115312,87733,97054,109566,114408,114717,95416,90542,99871,100643,101084,103897,97075,108592,110287,101265,112294,85508,105453,113601,96017,88401,95040,86638,100754,1028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pole","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:30726171":null,"PMID:36148799":null},"termid":"GO:0060187","terms_by_termid":{"GO:0001411":null,"GO:0031520":null,"GO:0035838":null,"GO:0035839":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:0043332":null,"GO:0051285":null,"GO:0051286":null,"GO:0051329":null,"GO:0070867":null,"GO:0106186":null,"GO:0140472":null,"GO:1902716":null,"GO:1902929":null,"GO:1990819":null}}


id: PBO:0077892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein pseudogene 1","termid":"PBO:0077892"}


id: GO:0035719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tRNA from the cytoplasm to the nucleus.","definition_xrefs":["GOC:vw","PMID:20032305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into nucleus","termid":"GO:0006404"},{"relation_name":"is_a","term_name":"tRNA transport","termid":"GO:0051031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tRNA import into nucleus","synonyms":[{"name":"retrograde tRNA transport into nucleus","type":"exact"},{"name":"tRNA nuclear import","type":"exact"}],"termid":"GO:0035719"}


id: GO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.5","RHEA:21836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"arabinonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03032","MetaCyc:ARABINONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"D-arabinonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming)","type":"related"},{"name":"D-arabinonate hydro-lyase activity","type":"related"}],"termid":"GO:0047675"}


id: FYPO:0003755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle. In fission yeast, the characteristics of wild type cells of the sequenced strain (972 h-) or the isogenic h+ or h90 strains are regarded as normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"inheres_in","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype","synonyms":[{"name":"abnormal cell phenotype during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype during mitotic cell cycle","type":"related"},{"name":"abnormal vegetative fission yeast cell phenotype","type":"exact"}],"termid":"FYPO:0003755"}


id: SO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene caused by unequal crossing over at recombination.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene_by_unequal_crossing_over","synonyms":[{"name":"pseudogene by unequal crossing over","type":"exact"}],"termid":"SO:0000044"}


id: PBO:0002949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding protein Fet5 (predicted)","termid":"PBO:0002949"}


id: GO:0035288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning the insect head anlage into procephalic (labral, (ocular), antennal and intercalary) segments. The procephalic segments lie anterior to the gnathal (posterior head) segments, and are pattered by different segmentation gene cascades to the abdominal, thoracic and posterior head (gnathal) segments.","definition_xrefs":["PMID:15382136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head segmentation","termid":"GO:0035287"},{"relation_name":"part_of","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior head segmentation","synonyms":[{"name":"procephalic segmentation","type":"related"}],"termid":"GO:0035288"}


id: PBO:0066928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 230","termid":"PBO:0066928"}


id: PBO:0069080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 327, pseudogene","termid":"PBO:0069080"}


id: PBO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 7","termid":"PBO:0046553"}


id: PBO:0077477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 199","termid":"PBO:0077477"}


id: PR:Q9P7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13305:SF0","OMA:SCHPO00663","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.13c","secondary_identifiers":["UniProtKB:Q9P7M5"],"synonyms":[{"name":"Spom972h-NOP10","type":"exact"},{"name":"nucleolar protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nucleolar protein family A member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snoRNP protein nop10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7M5"}


id: GO:2000102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mammary stem cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of mammary stem cell proliferation","termid":"GO:2000101"},{"relation_name":"negatively_regulates","term_name":"mammary stem cell proliferation","termid":"GO:0002174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary stem cell proliferation","termid":"GO:2000102"}


id: PBO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 1","termid":"PBO:0061661"}


id: GO:0038111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-7 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-7","termid":"GO:0098761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-7-mediated signaling pathway","synonyms":[{"name":"IL-7-mediated signaling pathway","type":"exact"},{"name":"interleukin-7-mediated signalling pathway","type":"exact"}],"termid":"GO:0038111"}


id: PBO:0080685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain, phosphoinositide interacting 2","termid":"PBO:0080685"}


id: GO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory inner membrane","synonyms":[{"name":"inner membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062245"}


id: GO:0016064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by immunoglobulins, whether cell-bound or in solution.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunoglobulin mediated immune response","synonyms":[{"name":"antibody-mediated immune response","type":"exact"}],"termid":"GO:0016064"}


id: PBO:0047148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM181A antisense RNA 1","termid":"PBO:0047148"}


id: FYPO:0002781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to nitric oxide. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription during cellular response to nitric oxide","synonyms":[{"name":"increased transcription during cellular response to NO during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to nitric oxide during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to nitric oxide stress","type":"related"}],"termid":"FYPO:0002781"}


id: PBO:0064786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1F antisense RNA 1","termid":"PBO:0064786"}


id: GO:0034968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by addition of one or more methyl groups to a lysine residue.","definition_xrefs":["GOC:pr","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone lysine methylation (obsolete GO:0034968)","termid":"GO:0034968"}


id: PBO:0076035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32C","termid":"PBO:0076035"}


id: PBO:0078295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 1-1","termid":"PBO:0078295"}


id: GO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"heart trabecula morphogenesis","termid":"GO:0061384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart trabecula formation","synonyms":[{"name":"cardiac trabecula formation","type":"exact"},{"name":"cardiac trabeculation","type":"exact"},{"name":"heart trabecula biogenesis","type":"related"},{"name":"heart trabeculation","type":"exact"}],"termid":"GO:0060347"}


id: PATO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000174 autonomic function (obsolete PATO:0000174)","termid":"PATO:0000174"}


id: GO:0015486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (glycoside, pentoside or hexuronide)(out) + monovalent cation(out) = (glycoside, pentoside or hexuronide)(in) + monovalent cation(in). The cation is Na+, Li+ or H+.","definition_xrefs":["TC:2.A.2.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycoside-pentoside-hexuronide:cation symporter activity","termid":"GO:0015486"}


id: PBO:0003906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1","termid":"PBO:0003906"}


id: GO:1990595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with basic secretagogues to initiate pseudo-allergic reactions in mast cells.","definition_xrefs":["PMID:25517090","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"mast cell secretagogue receptor activity","termid":"GO:1990595"}


id: PR:Q9US43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- urg2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase urg2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.17c","synonyms":[{"name":"Spom972h-urg2","type":"exact"},{"name":"UMP pyrophosphorylase urg2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase urg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US43"}


id: PBO:0069715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 995, pseudogene","termid":"PBO:0069715"}


id: PBO:0016974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mcp3","termid":"PBO:0016974"}


id: PBO:0072853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 3","termid":"PBO:0072853"}


id: PBO:0055972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 1","termid":"PBO:0055972"}


id: FYPO:0006193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mating projection is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal shmoo formation","termid":"FYPO:0000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal shmoo morphology","synonyms":[{"name":"normal conjugation tube morphology","type":"exact"},{"name":"normal mating projection morphology","type":"exact"}],"termid":"FYPO:0006193"}


id: PR:P24488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php2 gene.","definition_xrefs":["UniProtKB:P24488","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator hap2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.11c","synonyms":[{"name":"Spom972h-php2","type":"exact"}],"termid":"PR:P24488"}


id: PBO:0030131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_iron_level","termid":"PBO:0030131"}


id: FYPO:0002028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one actomyosin contractile ring.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"multiple actomyosin contractile rings present","synonyms":[{"name":"actomyosin contractile rings present in greater numbers","type":"exact"},{"name":"multiple actomyosin contractile rings present during mitotic cell cycle","type":"related"},{"name":"multiple actomyosin contractile rings present during vegetative growth","type":"exact"},{"name":"multiple cytokinetic contractile rings present","type":"exact"},{"name":"multiple mitotic contractile rings present","type":"exact"}],"termid":"FYPO:0002028"}


id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: PBO:0068267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 3","termid":"PBO:0068267"}


id: GO:0017023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the removal of the phosphate group from phosphomyosin. Composed of a PP1 catalytic subunit (PP1c/PPP1CB) and a myosin phosphatase targeting subunit (MYPT1/PPP1R12A).","definition_xrefs":["PMID:30076859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin phosphatase complex","termid":"GO:0017023"}


id: RO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transport process or transporter activity and the outcome of this p is to move c from one location to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports_or_maintains_localization_of","termid":"RO:0002313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports","termid":"RO:0002020"}


id: PBO:0045717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 1","termid":"PBO:0045717"}


id: GO:0060239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of signal transduction involved in conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"positively_regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"positive regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060239"}


id: SO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dependent entity that inheres in a bearer, a sequence variant.","definition_xrefs":["SO:ke","PMID:17597783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_quality","synonyms":[{"name":"variant quality","type":"exact"}],"termid":"SO:0001761"}


id: PBO:0112741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 2 (gene/pseudogene)","termid":"PBO:0112741"}


id: GO:0018915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring. It is a colorless liquid with a pungent odor used as a solvent and as a component of automotive and aviation fuels.","direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylbenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ethb2"],"synonyms":[{"name":"ethylbenzene metabolism","type":"exact"}],"termid":"GO:0018915"}


id: PBO:0072008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 10","termid":"PBO:0072008"}


id: FYPO:0004892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an echinocandin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on echinocandin","synonyms":[{"name":"normal cell population growth in presence of echinocandin","type":"exact"},{"name":"normal cell population growth on echinocandin","type":"exact"},{"name":"normal cellular response to echinocandin","type":"related"},{"name":"normal vegetative cell population growth on echinocandin","type":"exact"}],"termid":"FYPO:0004892"}


id: FYPO:0007546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear envelope division does not occur. Nuclear envelope division takes place at the end of mitosis; the nuclear envelope undergoes localized breakdown in the nuclear bridge midzone and the ends are sealed and retrieved into the envelopes of the separated daughter nuclei. When nuclear envelope division does not occur, the two DNA masses remain linked by the nuclear bridge, and may coalesce back into a single nucleus.","definition_xrefs":["PMID:32502403","PMID:32848252","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear envelope division","synonyms":[{"name":"abolished NE division","type":"exact"},{"name":"abolished nuclear envelope division during mitotic cell cycle","type":"related"},{"name":"abolished nuclear envelope division during vegetative growth","type":"exact"},{"name":"failed nuclear envelope division","type":"exact"},{"name":"nuclear envelope division abolished","type":"exact"}],"termid":"FYPO:0007546"}


id: PBO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 4","termid":"PBO:0070896"}


id: PBO:0063429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 3","termid":"PBO:0063429"}


id: FYPO:0008139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"dilated endoplasmic reticulum lumen","synonyms":[{"name":"dialted ER lumen","type":"exact"}],"termid":"FYPO:0008139"}


id: GO:0141159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal acidification of host phagosomes. Mechanisms by which a symbiont prevents host phagosome acidification include the inhibitition of host V-ATPase, the proton pump that acidifies the phagosome, or disruption of the phagosome membrane by pore-forming toxin. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22087003","PMID:33505976","PMID:20333253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host phagosome acidification","termid":"GO:0141159"}


id: PBO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase","termid":"PBO:0004833"}


id: PBO:0049515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 25","termid":"PBO:0049515"}


id: GO:0004073
data:
  {"annotated_genes":["SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111902],"is_not":false,"summary":null,"term":"GO:0004073"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate 4-semialdehyde + NADP+ + phosphate = 4-phospho-L-aspartate + H+ + NADPH.","definition_xrefs":["EC:1.2.1.11","RHEA:24284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aspartate-semialdehyde dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN","KEGG_REACTION:R02291"],"synonyms":[{"name":"ASA dehydrogenase activity","type":"related"},{"name":"L-aspartate-4-semialdehyde:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"L-aspartate-beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"L-aspartate-beta-semialdehyde:NADP oxidoreductase (phosporylating)","type":"related"},{"name":"aspartate semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004073","terms_by_termid":{"GO:0004073":null}}


id: GO:0036351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of ubiquitin group at lysine 13 (H2A-K13) in metazoans, and at the equivalent residue in other organisms. Monoubiquitin is first attached to H2A-K13 and K63-linked ubiquitin chains are then extended from this monoubiquitin.","definition_xrefs":["PMID:22980979","PMID:22713238","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K13 ubiquitination (obsolete GO:0036351)","synonyms":[{"name":"histone H2A ubiquitination (H2A-K13)","type":"exact"}],"termid":"GO:0036351"}


id: PBO:0036553
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRosine requiring","termid":"PBO:0036553"}


id: PBO:0036135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_acetylation_during_vegetative_growth","termid":"PBO:0036135"}


id: PBO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase (predicted)","termid":"PBO:0002574"}


id: PBO:0049006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein hormone subunit alpha 2","termid":"PBO:0049006"}


id: PBO:0063483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 1 pseudogene 1","termid":"PBO:0063483"}


id: GO:1902217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an erythrocyte.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:14569084","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte apoptotic process","synonyms":[{"name":"RBC apoptosis","type":"narrow"},{"name":"RBC apoptotic process","type":"exact"},{"name":"erythrocyte apoptosis","type":"narrow"},{"name":"red blood cell apoptosis","type":"narrow"},{"name":"red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902217"}


id: GO:0060651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland bud epithelial cell proliferation that results in the elongation of the bud.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060651"}


id: GO:0140461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The organization of chromatin into heterochromatin at the subtelomeric region of a chromosome.","definition_xrefs":["PMID:26744419"],"gene_count":0,"genotype_count":0,"name":"obsolete subtelomeric heterochromatin organization (obsolete GO:0140461)","termid":"GO:0140461"}


id: PBO:0026882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II-regulated_genes_during_nitrogen_starvation","termid":"PBO:0026882"}


id: GO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p.","definition_xrefs":["GOC:elh","PMID:16873066","PMID:16873065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hrd1p ubiquitin ligase complex","termid":"GO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005789","GO:0005783"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase ERAD-L complex","termid":"GO:0000839"}


id: PR:O74341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03080","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.08c","secondary_identifiers":["UniProtKB:O74341"],"synonyms":[{"name":"CCT-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT3","type":"exact"},{"name":"TCP-1-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74341"}


id: GO:0035344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hypoxanthine, 6-hydroxypurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"hypoxanthine transport","synonyms":[{"name":"6-hydroxypurine transport","type":"exact"},{"name":"hypoxanthine transmembrane transport","type":"exact"}],"termid":"GO:0035344"}


id: PBO:0003557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase Prs5 (predicted)","termid":"PBO:0003557"}


id: PATO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000972 relative permeability (obsolete PATO:0000972)","termid":"PATO:0000972"}


id: PBO:0018135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A transmembrane transporter Bfr1","termid":"PBO:0018135"}


id: GO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:tair_curators","PMID:16461380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lead ion","termid":"GO:0010288"}


id: PBO:0066986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 289","termid":"PBO:0066986"}


id: PBO:0064564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraoxonase 2","termid":"PBO:0064564"}


id: PBO:0085438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; HRB1 has a paralog, GBP2, that arose from the whole genome duplication","termid":"PBO:0085438"}


id: PBO:0084086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for Gpa1p; amplifies G protein signaling; functions as a chaperone under ATP-depleted oxidative stress conditions; subunit of GET complex, involved in ATP dependent Golgi to ER trafficking and insertion of tail-anchored (TA) proteins into ER membrane under non-stress conditions; binds as dimer to transmembrane domain (TMD) cargo, shielding TMDs from aqueous solvent; protein abundance increases under DNA replication stress","termid":"PBO:0084086"}


id: GO:0048797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the swim bladder. This process pertains to the initial formation of a structure from unspecified parts. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"swim bladder morphogenesis","termid":"GO:0048795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder formation","synonyms":[{"name":"gas bladder biosynthesis","type":"exact"},{"name":"gas bladder formation","type":"exact"}],"termid":"GO:0048797"}


id: GO:0010052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a guard mother cell acquires the specialized features of a guard cell.","definition_xrefs":["GOC:tb","GOC:expert_db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"stomatal complex morphogenesis","termid":"GO:0010103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"guard cell differentiation","synonyms":[{"name":"stomatal cell differentiation","type":"related"}],"termid":"GO:0010052"}


id: GO:0014801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the free sarcoplasmic reticulum consisting of longitudinal tubules that connect terminal cisternae.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"longitudinal sarcoplasmic reticulum","termid":"GO:0014801"}


id: GO:0072085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the connecting tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"connecting tubule development","termid":"GO:0072027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of connecting tubule identity","termid":"GO:0072085"}


id: FYPO:0006588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is decreased, and some of the protein is present in the endoplasmic reticulum instead.","definition_xrefs":["PMID:29134248","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to shmoo tip membrane","termid":"FYPO:0006587"},{"relation_name":"is_a","term_name":"protein mislocalized to endoplasmic reticulum","termid":"FYPO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to shmoo tip membrane, with protein mislocalized to endoplasmic reticulum","synonyms":[{"name":"decreased protein localisation to mating projection tip membrane, with protein mislocalised to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to mating projection tip membrane, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to plasma membrane at shmoo tip, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to shmoo membrane fusion domain, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to shmoo projection membrane, with protein mislocalized to endoplasmic reticulum","type":"related"},{"name":"decreased protein localization to shmoo tip membrane, with protein mislocalized to ER","type":"exact"},{"name":"reduced protein localization to shmoo tip membrane, with protein mislocalized to endoplasmic reticulum","type":"related"}],"termid":"FYPO:0006588"}


id: GO:0098548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the Golgi membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"cytoplasmic side of Golgi membrane","termid":"GO:0098548"}


id: GO:0070983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a dendrite is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:sart","PMID:15046878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite guidance","synonyms":[{"name":"dendritic guidance","type":"exact"}],"termid":"GO:0070983"}


id: PBO:0074020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14","termid":"PBO:0074020"}


id: FYPO:0006294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"},{"relation_name":"is_a","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy during nitrogen starvation","synonyms":[{"name":"normal macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"normal macroautophagy during nitrogen depletion","type":"exact"},{"name":"normal macroautophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006294"}


id: PBO:0072630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and SPRY domain containing 1","termid":"PBO:0072630"}


id: PBO:0079045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-7","termid":"PBO:0079045"}


id: PBO:0053876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1152","termid":"PBO:0053876"}


id: MOD:00364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 5-hydroxy-N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:14661085","RESID:AA0359","PubMed:11349130","Unimod:445#K"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"has_functional_parent","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(2R,5Xi)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"(2Xi,5S)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentanaminium","type":"exact"},{"name":"(2Xi,5S)-5-azanyl-5-carboxy-2-hydroxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"5-hydroxy-N(zeta)-trimethyllysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyl","type":"related"},{"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"5-hydroxylated N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"5HyN6Me3Lys","type":"exact"},{"name":"Hydroxytrimethyl","type":"related"},{"name":"MOD_RES N6,N6,N6-trimethyl-5-hydroxylysine","type":"exact"},{"name":"alpha-amino-epsilon-dimethylamino-delta-hydroxycaproic acid","type":"exact"},{"name":"delta-hydroxy-epsilon-N,N,N-trimethyllysine","type":"exact"},{"name":"lysine derivative Lys(z)","type":"exact"}],"termid":"MOD:00364"}


id: GO:1903148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any uracil transmembrane transporter activity that is involved in uracil import into cell.","definition_xrefs":["GO_REF:0000061","GOC:dos","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil transmembrane transporter activity involved in uracil import into cell (obsolete GO:1903148)","synonyms":[{"name":"uracil transmembrane transporter activity involved in uracil import into cell","type":"exact"},{"name":"uracil/uridine permease activity involved in uracil import into cell","type":"related"}],"termid":"GO:1903148"}


id: PBO:0062095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 45 pseudogene","termid":"PBO:0062095"}


id: GO:0009041
data:
  {"annotated_genes":["SJAG_04657","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114116],"is_not":false,"summary":null,"term":"GO:0009041"},{"annotations":[111693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (d)UMP = ADP + (d)UDP.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"UMP/dUMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009041","terms_by_termid":{"GO:0009041":null,"GO:0033862":null}}


id: GO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism.","definition_xrefs":["ISBN:0198506732","ISBN:1555812090","PMID:26846462","PMID:32588192","PMID:30416149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"transposition","termid":"GO:0032196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"DNA transposition","secondary_identifiers":["Wikipedia:Transposase","GO:0006318","Wikipedia:Transposable_element","GO:0006317"],"synonyms":[{"name":"Class II transposition","type":"exact"},{"name":"transposition, DNA-mediated","type":"exact"}],"termid":"GO:0006313"}


id: SO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the stability of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_function_variant","termid":"SO:0001538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_stability_variant","synonyms":[{"name":"transcript stability variant","type":"exact"}],"termid":"SO:0001546"}


id: GO:1905924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invadopodium assembly (obsolete GO:1905924)","synonyms":[{"name":"regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905924"}


id: PBO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 47","termid":"PBO:0071628"}


id: PBO:0071489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 30","termid":"PBO:0071489"}


id: GO:0034455
data:
  {"annotated_genes":["SJAG_00879","SJAG_02702","SJAG_01764","SJAG_03341","SJAG_02608","SJAG_05187"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85411,88188,88769,102087,103082,106692],"is_not":false,"summary":null,"term":"GO:0034455"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome and is required for the subsequent assembly of the rest of the preribosome. In S. cerevisiae, it is composed of Utp5p, Utp4p, Nan1p, Utp8p, Utp9p, Utp10 and Utp15p.","definition_xrefs":["PMID:17515605","GOC:krc","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00879":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_02702":null,"SJAG_03341":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005730"],"is_obsolete":false,"name":"t-UTP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nan1p-containing subcomplex of 90S preribosome","type":"exact"}],"termid":"GO:0034455","terms_by_termid":{"GO:0034455":null}}


id: PBO:0067401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 508, pseudogene","termid":"PBO:0067401"}


id: GO:0035573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal serine of proteins to form the derivative N,N,N-trimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine trimethylation","termid":"GO:0035573"}


id: GO:0031088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"platelet dense granule membrane","termid":"GO:0031088"}


id: PBO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faster evolving duplicate","termid":"PBO:0009798"}


id: GO:0120027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmosensory signaling pathway (obsolete GO:0120027)","termid":"GO:0120027"}


id: GO:0018851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene oxide = (Z)-2-methyl-5-isopropylhexa-2,5-dienal.","definition_xrefs":["EC:5.5.1.10","RHEA:16693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"alpha-pinene-oxide decyclase activity","secondary_identifiers":["MetaCyc:ALPHA-PINENE-OXIDE-DECYCLASE-RXN","UM-BBD_reactionID:r0743","KEGG_REACTION:R04040"],"synonyms":[{"name":"alpha-pinene oxide lyase activity","type":"exact"},{"name":"alpha-pinene-oxide lyase (decyclizing)","type":"related"}],"termid":"GO:0018851"}


id: PBO:0039484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A7, pseudogene","termid":"PBO:0039484"}


id: GO:1900985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vindoline.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:12228585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"vindoline metabolic process","termid":"GO:1900983"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"vindoline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5292"],"synonyms":[{"name":"vindoline anabolism","type":"exact"},{"name":"vindoline biosynthesis","type":"exact"},{"name":"vindoline formation","type":"exact"},{"name":"vindoline synthesis","type":"exact"}],"termid":"GO:1900985"}


id: PBO:0031631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascospore_wall_biogenesis","termid":"PBO:0031631"}


id: PBO:0053030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 4 beta pseudogene 1","termid":"PBO:0053030"}


id: PBO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.99.1","termid":"PBO:0000159"}


id: GO:0072173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric tubule are generated and organized from an epithelium. A metanephric tubule is an epithelial tube that is part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"metanephric tubule development","termid":"GO:0072170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule morphogenesis","termid":"GO:0072173"}


id: PBO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein 2","termid":"PBO:0004917"}


id: GO:0050287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-sorbose + NADP+ = 5-dehydro-D-fructose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.123","RHEA:15001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sorbose 5-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:SORBOSE-5-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01694"],"synonyms":[{"name":"5-keto-D-fructose reductase activity","type":"related"},{"name":"5-ketofructose reductase activity","type":"related"},{"name":"L-sorbose:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-linked reductase activity","type":"related"},{"name":"sorbose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0050287"}


id: SO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a nuclear pseudogene of a mitochndrial gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000899 nuclear_mitochondrial (obsolete SO:0000899)","synonyms":[{"name":"nuclear mitochondrial","type":"exact"}],"termid":"SO:0000899"}


id: PBO:0030333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphoinositide_level","termid":"PBO:0030333"}


id: PBO:0060178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 2","termid":"PBO:0060178"}


id: PBO:0040158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit family member 4","termid":"PBO:0040158"}


id: PBO:0003470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic valine-tRNA ligase Vrs1/Vas1","termid":"PBO:0003470"}


id: GO:0071298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to L-ascorbic acid","termid":"GO:0033591"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-ascorbic acid","synonyms":[{"name":"cellular response to L-ascorbate","type":"exact"},{"name":"cellular response to ascorbic acid","type":"broad"},{"name":"cellular response to vitamin C","type":"exact"}],"termid":"GO:0071298"}


id: PBO:0082442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in DNA replication during S phase; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mitotic spindles along with Clb3p and Clb4p; most abundant during late G1; CLB6 has a paralog, CLB5, that arose from the whole genome duplication","termid":"PBO:0082442"}


id: PBO:0040623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 2","termid":"PBO:0040623"}


id: GO:0071226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octamer oligosaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of fungal origin","termid":"GO:0002238"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to molecule of fungal origin","synonyms":[{"name":"cellular response to fungus associated molecule","type":"exact"}],"termid":"GO:0071226"}


id: GO:0021562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["ISBN:0838580343","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve development","synonyms":[{"name":"CN VIII development","type":"exact"},{"name":"acoustic nerve development","type":"exact"},{"name":"cranial nerve 8 development","type":"exact"},{"name":"cranial nerve VIII development","type":"exact"}],"termid":"GO:0021562"}


id: _global:is_consecutive_sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R is_consecutive_sequence_of R iff every instance of R is equivalent to a collection of instances of U:u1, u2, un, such that no pair of ux uy is overlapping and for all ux, it is adjacent to ux-1 and ux+1, with the exception of the initial and terminal u1,and un (which may be identical).","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"_global:is_consecutive_sequence_of"}


id: PBO:0054644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2049","termid":"PBO:0054644"}


id: PBO:0036243
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli PyrB","termid":"PBO:0036243"}


id: FYPO:0005790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"J\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"J-shaped vegetative cell","synonyms":[{"name":"J-shaped cell","type":"exact"},{"name":"J-shaped cell during vegetative growth","type":"exact"},{"name":"J-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, J-shaped","type":"exact"}],"termid":"FYPO:0005790"}


id: PBO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of eIF2 kinase Gcn2p; competes with Gcn2p for binding to Gcn1p; may contribute to regulation of translation in response to starvation via regulation of Gcn2p; binds to monomeric actin and to ribosomes and polyribosomes; ortholog of mammalian IMPACT","termid":"PBO:0085004"}


id: GO:0046793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus activates the frequency, rate or extent of phosphorylation of host RNA polymerase II.","definition_xrefs":["PMID:7637000"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of phosphorylation of host RNA polymerase II (obsolete GO:0046793)","synonyms":[{"name":"induction by virus of modification of host RNA polymerase II","type":"broad"},{"name":"virus-induced modification of host RNA polymerase II","type":"exact"}],"termid":"GO:0046793"}


id: PBO:0083421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YOR012W; null mutant displays increased levels of spontaneous Rad52 foci","termid":"PBO:0083421"}


id: GO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a leukocyte to vascular endothelial cell via adhesion molecules.","definition_xrefs":["GOC:bc","PMID:23897866","GOC:add","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}


id: FYPO:0006178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:11231572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"},{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actin cortical patch localization","synonyms":[{"name":"normal rate of actin cortical patch localisation","type":"exact"},{"name":"normal rate of actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"normal rate of actin cortical patch localization during vegetative growth","type":"exact"},{"name":"normal rate of actin patch localization","type":"exact"}],"termid":"FYPO:0006178"}


id: PBO:0047764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FosB proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0047764"}


id: PBO:0030556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_import","termid":"PBO:0030556"}


id: RO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","termid":"RO:0002559"}


id: RO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_eaten_by","termid":"RO:0002471"}


id: PBO:0066605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T2","termid":"PBO:0066605"}


id: GO:0098888
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of synaptic membrane","termid":"GO:0099243"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic membrane","synonyms":[{"name":"extrinsic component of presynaptic plasma membrane","type":"exact"}],"termid":"GO:0098888"}


id: PBO:0054144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1511","termid":"PBO:0054144"}


id: PBO:0089483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein","termid":"PBO:0089483"}


id: GO:0061522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 1,4-dihydroxy-2-naphthoyl-CoA + H2O = 1,4-dihydroxy-2-naphthoate + CoA + H+.","definition_xrefs":["RHEA:26309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity","secondary_identifiers":["EC:3.1.2.28"],"termid":"GO:0061522"}


id: PBO:0055716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMF1 antisense RNA 1","termid":"PBO:0055716"}


id: PBO:0052880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-2","termid":"PBO:0052880"}


id: GO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by symbiont","termid":"GO:0052460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by symbiont","synonyms":[{"name":"activation by host of nutrient release from symbiont","type":"narrow"},{"name":"positive regulation by host of nutrient release from symbiont","type":"exact"},{"name":"promotion of nutrient release from symbiont","type":"exact"},{"name":"stimulation by host of nutrient release from symbiont","type":"narrow"},{"name":"up regulation by host of nutrient release from symbiont","type":"exact"},{"name":"up-regulation by host of nutrient release from symbiont","type":"exact"},{"name":"upregulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052519"}


id: GO:0070132
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial translational initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070132","terms_by_termid":{"GO:0070134":null}}


id: PBO:0109039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT57 pseudogene 1","termid":"PBO:0109039"}


id: PBO:0051739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6 pseudogene 1","termid":"PBO:0051739"}


id: GO:0047404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 3-D-glucuronosyl-N2-,6-disulfo-beta-D-glucosamine = glucuronate + N2,6-disulfo-D-glucosamine.","definition_xrefs":["EC:3.2.1.56","MetaCyc:3.2.1.56-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronosyl-disulfoglucosamine glucuronidase activity","secondary_identifiers":["MetaCyc:RXN-16484","RHEA:15073"],"synonyms":[{"name":"3-D-glucuronsyl-2-N,6-disulfo-beta-D-glucosamine glucuronohydrolase activity","type":"related"},{"name":"3-D-glucuronsyl-N2,6-disulfo-beta-D-glucosamine glucuronohydrolase activity","type":"related"},{"name":"glucuronosyl-disulphoglucosamine glucuronidase activity","type":"exact"}],"termid":"GO:0047404"}


id: PBO:0060991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHERF family PDZ scaffold protein 2","termid":"PBO:0060991"}


id: PBO:0088806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh3","termid":"PBO:0088806"}


id: PBO:0069728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1009, pseudogene","termid":"PBO:0069728"}


id: PBO:0058733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-3","termid":"PBO:0058733"}


id: PBO:0040589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 1","termid":"PBO:0040589"}


id: GO:1902956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial electron transport, NADH to ubiquinone.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23530063","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"mitochondrial electron transport, NADH to ubiquinone","termid":"GO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:1902956"}


id: GO:0071861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tachykinin receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"tachykinin receptor binding","termid":"GO:0071861"}


id: GO:1901499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexane stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hexane","termid":"GO:1901499"}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: GO:0060659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the nipple sheath from the unspecified epidermis. This process begins with a circular ingrowth of the epidermis around the region of the mammary sprout. It ends before the region begins to elevate.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"nipple morphogenesis","termid":"GO:0060658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nipple sheath formation","termid":"GO:0060659"}


id: PBO:0079462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 2","termid":"PBO:0079462"}


id: GO:0047506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dAMP = ADP + dADP.","definition_xrefs":["EC:2.7.4.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"(deoxy)adenylate kinase activity","secondary_identifiers":["RHEA:23100","MetaCyc:DEOXYADENYLATE-KINASE-RXN"],"synonyms":[{"name":"ATP:(d)AMP phosphotransferase activity","type":"related"}],"termid":"GO:0047506"}


id: PBO:0060525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0060525"}


id: PBO:0085376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[PIN(+)] prion; an infectious protein conformation that is generally an ordered protein aggregate","termid":"PBO:0085376"}


id: FYECO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3,4-dihydrocoumarin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,4-dihydrocoumarin","synonyms":[{"name":"3,4-dihydrocoumarin added","type":"exact"}],"termid":"FYECO:0000410"}


id: PBO:0012039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Rng2-like (predicted)","termid":"PBO:0012039"}


id: PR:O74521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C663.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.15c","synonyms":[{"name":"Spom972h-SPCC663.15c","type":"exact"}],"termid":"PR:O74521"}


id: PBO:0086129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086129"}


id: PBO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR signaling pathway transcriptional corepressor Crf1 (predicted)","termid":"PBO:0001528"}


id: PBO:0057577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 874","termid":"PBO:0057577"}


id: PBO:0046231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 24","termid":"PBO:0046231"}


id: PBO:0087001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-family GTPase interacting protein and Cdc42p effector; required with Gic2p for polarity establishment and initiation of budding; involved in recruitment of septins to the presumptive bud site; interacts with Cdc42p via the Cdc42/Rac-interactive binding (CRIB) domain; gic1 gic2 double mutants are defective for polarizing Cdc42p at elevated temperature, so may function both up- and downstream of Cdc42p; regulates mitotic exit; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0087001"}


id: PBO:0070583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 49","termid":"PBO:0070583"}


id: GO:1903623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA polymerase III activity.","definition_xrefs":["GOC:TermGenie","PMID:25392932","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase III","termid":"GO:0016480"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of RNA polymerase III activity","termid":"GO:1903622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"negative regulation of RNA polymerase III activity","synonyms":[{"name":"down regulation of DNA-directed RNA polymerase activity involved in transcription from RNA polymerase III promoter","type":"exact"},{"name":"down regulation of RNA polymerase III activity","type":"exact"},{"name":"down-regulation of DNA-directed RNA polymerase activity involved in transcription from RNA polymerase III promoter","type":"exact"},{"name":"down-regulation of RNA polymerase III activity","type":"exact"},{"name":"downregulation of DNA-directed RNA polymerase activity involved in transcription from RNA polymerase III promoter","type":"exact"},{"name":"downregulation of RNA polymerase III activity","type":"exact"},{"name":"inhibition of DNA-directed RNA polymerase activity involved in transcription from RNA polymerase III promoter","type":"narrow"},{"name":"inhibition of RNA polymerase III activity","type":"narrow"},{"name":"negative regulation of DNA-directed RNA polymerase activity involved in transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:1903623"}


id: PBO:0027702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_chromatin_organization","termid":"PBO:0027702"}


id: GO:2000606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"}


id: PBO:0002749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic acid transport protein Mae1","termid":"PBO:0002749"}


id: GO:0008967
data:
  {"annotated_genes":["SJAG_03108"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99754],"is_not":false,"summary":null,"term":"GO:0008967"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate.","definition_xrefs":["EC:3.1.3.18","RHEA:14369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"phosphoglycolate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01334","MetaCyc:GPH-RXN"],"synonyms":[{"name":"2-phosphoglycolate phosphatase activity","type":"related"},{"name":"2-phosphoglycolate phosphohydrolase activity","type":"related"},{"name":"P-glycolate phosphatase activity","type":"related"},{"name":"phosphoglycolate hydrolase activity","type":"related"},{"name":"phosphoglycollate phosphatase activity","type":"related"}],"termid":"GO:0008967","terms_by_termid":{"GO:0008967":null}}


id: PBO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translin-associated Factor X","termid":"PBO:0018117"}


id: PBO:0005800
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMpK subunit","termid":"PBO:0005800"}


id: GO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052216)","synonyms":[{"name":"chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052216"}


id: PBO:0048662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 4 pseudogene","termid":"PBO:0048662"}


id: PBO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr3","termid":"PBO:0033833"}


id: GO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neuromast over time, from its formation to the mature structure. The neuromast is the sensory organ of the lateral line and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromasts are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast development","termid":"GO:0048884"}


id: PBO:0081755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 684","termid":"PBO:0081755"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["Unimod:43#N","OMSSA:182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: PBO:0068615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 66, pseudogene","termid":"PBO:0068615"}


id: PBO:0073257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 1","termid":"PBO:0073257"}


id: PBO:0083841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exo-1,3-beta-glucanase; involved in cell wall beta-glucan assembly; may be anchored to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor","termid":"PBO:0083841"}


id: PBO:0041910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBLL1 antisense RNA 1","termid":"PBO:0041910"}


id: PBO:0069552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 823, pseudogene","termid":"PBO:0069552"}


id: PBO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0032740"}


id: PBO:0058180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4474","termid":"PBO:0058180"}


id: FYPO:0003852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing FR901464.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on FR901464","synonyms":[{"name":"normal cell population growth in presence of FR901464","type":"exact"},{"name":"normal cell population growth on FR901464","type":"exact"},{"name":"normal cellular response to FR901464","type":"related"},{"name":"normal vegetative cell population growth on FR901464","type":"exact"}],"termid":"FYPO:0003852"}


id: PATO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000204 absolute locomotor_activity (obsolete PATO:0000204)","termid":"PATO:0000204"}


id: PBO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit mu 2","termid":"PBO:0039667"}


id: PBO:0058822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8052","termid":"PBO:0058822"}


id: GO:2000648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"positively_regulates","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell proliferation","termid":"GO:2000648"}


id: PBO:0086249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that mediates sphingolipid homeostasis; evolutionarily conserved, required for resistance to agents that induce unfolded protein response; Orm1p and Orm2p together control membrane biogenesis by coordinating lipid homeostasis with protein quality control; protein abundance increases in response to DNA replication stress; ORM2 has a paralog, ORM1, that arose from the whole genome duplication","termid":"PBO:0086249"}


id: GO:2001160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 methylation.","definition_xrefs":["PMID:12876294"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 methylation (obsolete GO:2001160)","synonyms":[{"name":"regulation of histone H3 K79 methylation","type":"exact"},{"name":"regulation of histone H3K79me","type":"exact"},{"name":"regulation of histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:2001160"}


id: PR:O74446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sif2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sad1-interacting factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.01","synonyms":[{"name":"Spom972h-sif2","type":"exact"},{"name":"sporulation protein sif2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74446"}


id: PBO:0064015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 49","termid":"PBO:0064015"}


id: GO:2000042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of double-strand break repair via homologous recombination.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via homologous recombination","termid":"GO:0010569"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via homologous recombination","synonyms":[{"name":"negative regulation of HDR","type":"exact"},{"name":"negative regulation of HRR","type":"exact"},{"name":"negative regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"negative regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"negative regulation of homologous recombinational repair","type":"exact"},{"name":"negative regulation of homology-directed repair","type":"exact"}],"termid":"GO:2000042"}


id: RO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-application-role r iff c has-role r and r is an application role (CHEBI:33232)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_application_role","termid":"RO:0002261"}


id: PBO:0011183
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approver_email","termid":"PBO:0011183"}


id: PATO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001108 relative amplitude value (obsolete PATO:0001108)","termid":"PATO:0001108"}


id: PBO:0034167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-interaction_relation_helper_property","termid":"PBO:0034167"}


id: FYPO:0005538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere-telomerase complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere-telomerase complex assembly","synonyms":[{"name":"normal telomere-telomerase complex assembly during mitotic cell cycle","type":"related"},{"name":"normal telomere-telomerase complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005538"}


id: GO:0032593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small membrane-bounded vesicle that releases its contents by exocytosis in response to insulin stimulation; the contents are enriched in GLUT4, IRAP and VAMP2.","definition_xrefs":["PMID:17644329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"insulin-responsive compartment","synonyms":[{"name":"GLUT4 storage compartment","type":"exact"},{"name":"GSC","type":"related"},{"name":"IRC","type":"related"}],"termid":"GO:0032593"}


id: PBO:0087230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sedoheptulose bisphosphatase involved in riboneogenesis; dephosphorylates sedoheptulose 1,7-bisphosphate, which is converted via the nonoxidative pentose phosphate pathway to ribose-5-phosphate; facilitates the conversion of glycolytic intermediates to pentose phosphate units; also has fructose 1,6-bisphosphatase activity but this is probably not biologically relevant, since deletion does not affect FBP levels; GFP-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087230"}


id: GO:0010321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vegetative phase change. Vegetative phase change is the set of post-embryonic processes involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"vegetative phase change","termid":"GO:0010050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative phase change","termid":"GO:0010321"}


id: SO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_part","synonyms":[{"name":"chromosomal region","type":"exact"},{"name":"chromosomal_region","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"SO:0000830"}


id: PBO:0043961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma F, pseudogene","termid":"PBO:0043961"}


id: GO:0006548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine metabolic process","termid":"GO:0006547"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"imidazole-containing compound catabolic process","termid":"GO:0052805"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"L-histidine catabolic process","synonyms":[{"name":"histidine breakdown","type":"exact"},{"name":"histidine catabolic process","type":"broad"},{"name":"histidine catabolism","type":"exact"},{"name":"histidine degradation","type":"exact"}],"termid":"GO:0006548"}


id: PBO:0072666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 1","termid":"PBO:0072666"}


id: PBO:0036104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036104"}


id: PBO:0076202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 12","termid":"PBO:0076202"}


id: GO:0075015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a symbiont structure that serves to infect its host organism. It includes physiological, developmental, and morphological changes of the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of infection structure","synonyms":[{"name":"formation by symbiont of infection structure on or near host","type":"related"},{"name":"formation of host infection structure","type":"exact"},{"name":"formation of host penetration structure","type":"related"},{"name":"formation of infection structure on or near host","type":"related"}],"termid":"GO:0075015"}


id: PBO:0027883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation","termid":"PBO:0027883"}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: PR:000045546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2B-alpha (Schizosaccharomyces pombe) that has been monoubiquitinated on the most C-terminal Lys residue. Example: UniProtKB:P04913-1, Lys-120, PR:000044771.","definition_xrefs":["PRO:CNA","PMID:27098497","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B-alpha (Schizosaccharomyces pombe)","termid":"PR:000045547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"htb1/MonoUbiq(K119)","pombase_gene_id":"SPCC622.09","secondary_identifiers":["PR:000036916"],"synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2B-alpha ubiquitinated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-htb1/Ubiq:1","type":"exact"},{"name":"htb1/MonoUbiq(K119)","type":"exact"},{"name":"htb1/MonoUbiq:(K120)","type":"exact"},{"name":"uH2B","type":"related"}],"termid":"PR:000045546"}


id: PBO:0030104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_ornithine_level","termid":"PBO:0030104"}


id: PBO:0076520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 30","termid":"PBO:0076520"}


id: GO:0097545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of an axoneme consisting in a doublet microtubule. Nine of these outer doublets form the 9+0 axoneme, while the 9+2 axoneme also contains a central pair. Dynein arms attached to the doublets provide the mechanism of movement of the cilium.","definition_xrefs":["Wikipedia:Axoneme","PMID:5044758","PMID:5664206","GOC:krc","GOC:cilia","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal outer doublet","synonyms":[{"name":"axoneme outer doublet","type":"exact"},{"name":"outer doublet","type":"broad"},{"name":"outer-doublet microtubules","type":"related"}],"termid":"GO:0097545"}


id: GO:0047229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13-hydroxydocosanoate + UDP-D-glucose = 13-beta-D-glucosyloxydocosanoate + UDP.","definition_xrefs":["MetaCyc:2.4.1.158-RXN","EC:2.4.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"13-hydroxydocosanoate 13-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:HYDROXYDOCOSANOATE-TRANS-RXN","RHEA:22316"],"synonyms":[{"name":"13-glucosyloxydocosanoate 2'-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-13-hydroxydocosanoate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoic acid glucosyltransferase activity","type":"related"},{"name":"UDPglucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxydocosanoate glucosyltransferase activity","type":"related"}],"termid":"GO:0047229"}


id: PBO:0038466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 5","termid":"PBO:0038466"}


id: GO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by a T cell triggered in response to the presence of a tumor cell.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:16730260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}


id: GO:0070482
data:
  {"annotated_genes":["SJAG_01585","SJAG_03345","SJAG_04018","SJAG_00642","SJAG_00221","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97344,113097,107832,105974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[112515,85437],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070482","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: GO:0097635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of autophagosome membrane (obsolete GO:0097635)","synonyms":[{"name":"autophagic vacuole peripheral membrane","type":"related"},{"name":"extrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"extrinsic to autophagic vacuole membrane","type":"exact"}],"termid":"GO:0097635"}


id: GO:1901424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toluene stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to toluene","termid":"GO:1901424"}


id: FYPO:0009052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamate as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on glutamate nitrogen source","synonyms":[{"name":"increased growth on glutamate nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamate nitrogen source","type":"exact"}],"termid":"FYPO:0009052"}


id: PBO:0077238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 3","termid":"PBO:0077238"}


id: PBO:0066995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 298","termid":"PBO:0066995"}


id: PATO:0000618
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two sides; two-sided.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral","termid":"PATO:0000618"}


id: GO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that modulates the frequency, rate or extent or transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription by galactose","termid":"GO:0000409"}


id: PBO:0057139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219a-2","termid":"PBO:0057139"}


id: GO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of the initiation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of initiation of T cell receptor signaling (obsolete GO:0023011)","synonyms":[{"name":"positive regulation of initiation of T cell receptor signaling","type":"exact"},{"name":"positive regulation of initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023011"}


id: PBO:0034504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_mitotic_S_phase","termid":"PBO:0034504"}


id: PBO:0046379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 3","termid":"PBO:0046379"}


id: PR:Q9US39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.02 gene.","definition_xrefs":["UniProtKB:Q9US39","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1039.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.02","synonyms":[{"name":"Spom972h-SPAC1039.02","type":"exact"}],"termid":"PR:Q9US39"}


id: GO:0004864
data:
  {"annotated_genes":["SJAG_02380","SJAG_04999","SJAG_03309","SJAG_03272","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85557,86451],"is_not":false,"summary":null,"term":"GO:0004864"},{"annotations":[95565,84049,107497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase inhibitor activity","termid":"GO:0019212"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0030234","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990681"],"synonyms":[{"name":"phosphoprotein phosphatase inhibitor activity","type":"exact"},{"name":"protein phosphatase 2 inhibitor activity","type":"narrow"},{"name":"protein phosphatase type 2A inhibitor activity","type":"narrow"}],"termid":"GO:0004864","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: FYPO:0007600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrial outer membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to mitochondrial outer membrane","synonyms":[{"name":"decreased protein localisation to mitochondrial outer membrane","type":"exact"},{"name":"decreased protein localization to mitochondrial outer membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrial outer membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to mitochondrion outer membrane","type":"exact"},{"name":"reduced protein localization to mitochondrial outer membrane","type":"exact"}],"termid":"FYPO:0007600"}


id: GO:0140723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of patulin, an acetate-derived tetraketide mycotoxin produced by several fungal species that shows antimicrobial properties against several bacteria.","definition_xrefs":["PMID:30680886","PMID:25120234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"patulin biosynthetic process","synonyms":[{"name":"patulin anabolism","type":"exact"},{"name":"patulin biosynthesis","type":"exact"},{"name":"patulin formation","type":"exact"},{"name":"patulin synthesis","type":"exact"}],"termid":"GO:0140723"}


id: PBO:0091893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane high-affinity glucose/fructose:proton symporter Ght5","termid":"PBO:0091893"}


id: PBO:0036542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notchless-like ribosome biogenesis protein Rsa4 (predicted)","termid":"PBO:0036542"}


id: PBO:0029152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_menadione","termid":"PBO:0029152"}


id: GO:0042723
data:
  {"annotated_genes":["SJAG_00381","SJAG_02406","SJAG_04866","SJAG_01970","SJAG_02421","SJAG_02047","SJAG_03538","SJAG_02420","SJAG_00827","SJAG_01742","SJAG_04282","SJAG_03362","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85219,109808],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[109714,109720,112140,90436,103497,110131,95651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[110132,109715,90437,112141,95652,109721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[65415,58760,95653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[106572,106573,95654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine (vitamin B1), and compounds derived from it.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thiamine-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"thiamin and derivative metabolic process","type":"exact"},{"name":"thiamin and derivative metabolism","type":"exact"},{"name":"thiamin-containing compound metabolic process","type":"exact"},{"name":"thiamine and derivative metabolic process","type":"exact"},{"name":"thiamine and derivative metabolism","type":"exact"},{"name":"thiamine-containing compound metabolism","type":"exact"},{"name":"vitamin B1 and derivative metabolic process","type":"exact"},{"name":"vitamin B1 and derivative metabolism","type":"exact"}],"termid":"GO:0042723","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0009229":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:0051414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisol stimulus. Cortisol is the major natural glucocorticoid synthesized in the zona fasciculata of the adrenal cortex; it affects the metabolism of glucose, protein, and fats and has appreciable mineralocorticoid activity. It also regulates the immune system and affects many other functions.","definition_xrefs":["ISBN:0721662544","PMID:11276391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisol","synonyms":[{"name":"response to cortisol stimulus","type":"exact"},{"name":"response to hydrocortisone stimulus","type":"exact"}],"termid":"GO:0051414"}


id: GO:0120094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"},{"relation_name":"negatively_regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-lysine crotonylation","termid":"GO:0120094"}


id: PBO:0046078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 3","termid":"PBO:0046078"}


id: FYPO:0006886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000120","FYPO:0002399","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"increased protein level at mitotic spindle","synonyms":[{"name":"increased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"increased protein level in mitotic spindle","type":"exact"},{"name":"protein accumulation at mitotic spindle","type":"exact"}],"termid":"FYPO:0006886"}


id: GO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid induced by the interaction of histamine with H2 type receptor receptors with subsequent activation of adenylate cyclase and elevation of intracellular cyclic AMP.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"histamine-induced gastric acid secretion","termid":"GO:0001697"}


id: PBO:0069376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 636, pseudogene","termid":"PBO:0069376"}


id: GO:0102811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geraniol + O2 + NADPH + H+ = (6E)-8-hydroxygeraniol + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.14.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"geraniol 10-hydroxylase activity","secondary_identifiers":["RHEA:32495","MetaCyc:RXN-8197"],"termid":"GO:0102811"}


id: FYPO:0006358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, does not occur when the cell is subject to glucose starvation.","definition_xrefs":["GO:0006338","PMID:28674280","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin remodeling during glucose starvation","synonyms":[{"name":"abolished chromatin modeling during glucose starvation","type":"exact"},{"name":"abolished chromatin remodeling during glucose depletion","type":"exact"},{"name":"abolished chromatin remodeling during glucose deprivation","type":"related"},{"name":"abolished chromatin remodeling during glucose limitation","type":"related"},{"name":"abolished chromatin remodelling during glucose starvation","type":"exact"},{"name":"chromatin remodeling during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0006358"}


id: PBO:0041999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 50","termid":"PBO:0041999"}


id: PBO:0046589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 31","termid":"PBO:0046589"}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: SO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region in mRNA where ribosome assembles.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"five_prime_UTR","termid":"SO:0000204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome_entry_site","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:ribosome_binding_site","type":"exact"},{"name":"ribosome entry site","type":"exact"}],"termid":"SO:0000139"}


id: PBO:0029944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_population_including_curved_cells_(obsolete_FYPO:0002293)","termid":"PBO:0029944"}


id: FYECO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which calcium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Ca ions","synonyms":[{"name":"Ca ions added","type":"exact"},{"name":"calcium ions added","type":"exact"}],"termid":"FYECO:0000034"}


id: PR:000050545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr2 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PMID:27227887","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","termid":"PR:000050544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr2/GDP+","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr2, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr2/GDP+","type":"exact"},{"name":"gtr2/GDP+","type":"exact"},{"name":"Gtr2/GDP+","type":"exact"}],"termid":"PR:000050545"}


id: GO:2000470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of peroxidase activity","termid":"GO:2000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peroxidase activity","synonyms":[{"name":"positive regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of oxyperoxidase activity","type":"exact"},{"name":"positive regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000470"}


id: PBO:0066746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 44","termid":"PBO:0066746"}


id: PBO:0052545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killin, p53 regulated DNA replication inhibitor","termid":"PBO:0052545"}


id: PBO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-29 (pseudogene)","termid":"PBO:0051147"}


id: PBO:0068044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 349","termid":"PBO:0068044"}


id: SO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_C_gene","synonyms":[{"name":"IGC_gene","type":"exact"},{"name":"Immunoglobulin_Constant_germline_Gene","type":"exact"},{"name":"immunoglobulin_C_gene","type":"exact"}],"termid":"SO:0002123"}


id: PBO:0072000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 2","termid":"PBO:0072000"}


id: GO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium maturation (obsolete GO:0075038)","synonyms":[{"name":"negative regulation of appressorium maturation on or near host","type":"related"},{"name":"negative regulation of maturation of appressorium on or near host","type":"exact"}],"termid":"GO:0075038"}


id: PBO:0054933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2347","termid":"PBO:0054933"}


id: PBO:0079124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone receptor","termid":"PBO:0079124"}


id: GO:0038156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-3 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-3-mediated signaling pathway","synonyms":[{"name":"IL-3-mediated signaling pathway","type":"exact"},{"name":"interleukin-3-mediated signalling pathway","type":"exact"}],"termid":"GO:0038156"}


id: GO:0044025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2B-serine (position 14) + ATP = histone H2B-phosphoserine (position 14) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 14 of histone H2B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2B kinase activity","termid":"GO:0140998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0004672","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H2BS14 kinase activity","synonyms":[{"name":"histone kinase activity (H2B-S14 specific)","type":"exact"},{"name":"histone serine kinase activity (H2B-S14 specific)","type":"exact"},{"name":"histone-serine kinase activity (H2B-S14 specific)","type":"exact"}],"termid":"GO:0044025"}


id: GO:1990371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to phenol.","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to phenol (obsolete GO:1990371)","termid":"GO:1990371"}


id: PBO:0061088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 6","termid":"PBO:0061088"}


id: GO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["MeSH:D009435","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemical synaptic transmission","secondary_identifiers":["Wikipedia:Neurotransmission"],"synonyms":[{"name":"neurotransmission","type":"related"},{"name":"signal transmission across a synapse","type":"broad"},{"name":"synaptic transmission","type":"broad"}],"termid":"GO:0007268"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: FYPO:0004594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched, septated and elongated.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"branched, elongated, septated cell","synonyms":[{"name":"branched, elongated, septated cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated, septated cell during vegetative growth","type":"exact"},{"name":"branched, elongated, septated vegetative cell","type":"exact"},{"name":"branched, long, septated cell","type":"exact"}],"termid":"FYPO:0004594"}


id: GO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thiabendazole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thiabendazole","synonyms":[{"name":"response to TBZ","type":"exact"}],"termid":"GO:0072712"}


id: MOD:01002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyryl","termid":"MOD:01002"}


id: PBO:0066614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 2B","termid":"PBO:0066614"}


id: PBO:0075445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastin","termid":"PBO:0075445"}


id: PBO:0081417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 273","termid":"PBO:0081417"}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: PBO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siepin homolog","termid":"PBO:0002066"}


id: PBO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-galactose transporter (predicted)","termid":"PBO:0000286"}


id: PBO:0004257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc9","termid":"PBO:0004257"}


id: PBO:0056476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 2","termid":"PBO:0056476"}


id: PBO:0050619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 11","termid":"PBO:0050619"}


id: PBO:0014259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein Scs22","termid":"PBO:0014259"}


id: PBO:0062153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 3 pseudogene","termid":"PBO:0062153"}


id: PR:Q9UT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.07 gene.","definition_xrefs":["UniProtKB:Q9UT59","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.07","synonyms":[{"name":"Spom972h-SPAC513.07","type":"exact"}],"termid":"PR:Q9UT59"}


id: PBO:0051262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-4 (pseudogene)","termid":"PBO:0051262"}


id: GO:0044075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vacuole organization in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25139904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vacuole organization","synonyms":[{"name":"modulation by symbiont of host vacuole biogenesis","type":"related"},{"name":"modulation by symbiont of host vacuole organisation","type":"exact"},{"name":"modulation by symbiont of host vacuole organization","type":"exact"},{"name":"modulation of host vacuole organization by symbiont","type":"exact"},{"name":"regulation by symbiont of host vacuole organization","type":"exact"}],"termid":"GO:0044075"}


id: PBO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(19)(q13)","termid":"PBO:0047954"}


id: GO:1900661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of emericellamide A biosynthetic process","synonyms":[{"name":"regulation of emericellamide A anabolism","type":"exact"},{"name":"regulation of emericellamide A biosynthesis","type":"exact"},{"name":"regulation of emericellamide A formation","type":"exact"},{"name":"regulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900661"}


id: PBO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally silent transcript from tco1 locus","termid":"PBO:0002124"}


id: PBO:0088899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family","termid":"PBO:0088899"}


id: PBO:0024831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic pumilio family RNA-binding protein Mpf1 (predicted)","termid":"PBO:0024831"}


id: PBO:0043109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin target of PRMT1","termid":"PBO:0043109"}


id: FYPO:0004368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an arsenic-containing substance.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on arsenic","synonyms":[{"name":"normal cell population growth in presence of arsenic","type":"exact"},{"name":"normal cell population growth on arsenic","type":"exact"},{"name":"normal cellular response to arsenic","type":"related"},{"name":"normal growth on arsenic molecular entity","type":"exact"},{"name":"normal growth on arsenic-containing substance","type":"exact"},{"name":"normal vegetative cell population growth on arsenic","type":"exact"}],"termid":"FYPO:0004368"}


id: PBO:0031272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased_during_vegetative_growth","termid":"PBO:0031272"}


id: PBO:0091185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 9","termid":"PBO:0091185"}


id: PBO:0088240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght2","termid":"PBO:0088240"}


id: GO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with urotensin II to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:15102493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"urotensin II receptor activity","termid":"GO:0001604"}


id: GO:0006918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of apoptosis by p53 (obsolete GO:0006918)","synonyms":[{"name":"induction of apoptosis by p53","type":"exact"}],"termid":"GO:0006918"}


id: GO:0102467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate + scutellarein = UDP( + scutellarin + H+.","definition_xrefs":["EC:2.4.1.253","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"scutellarein 7-O-glucuronosyltransferase activity","secondary_identifiers":["RHEA:28318","MetaCyc:RXN-14058"],"termid":"GO:0102467"}


id: FYPO:0001864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mating without glucose starvation","synonyms":[{"name":"conjugation without glucose starvation","type":"exact"},{"name":"mating in the absence of glucose starvation","type":"exact"},{"name":"mating without glucose depletion","type":"exact"},{"name":"mating without glucose deprivation","type":"exact"}],"termid":"FYPO:0001864"}


id: PBO:0078463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-1","termid":"PBO:0078463"}


id: PBO:0048071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 22","termid":"PBO:0048071"}


id: GO:0021818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The changes in the actin cytoskeleton that are necessary for the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh","PMID:12626695"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex radial glia guided migration (obsolete GO:0021818)","synonyms":[{"name":"modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021818"}


id: PBO:0089443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0089443"}


id: PBO:0029967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_gamma_radiation","termid":"PBO:0029967"}


id: PBO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030004"}


id: GO:0008824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanate + H2O = carbamate.","definition_xrefs":["RHEA:11120","EC:4.2.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cyanate hydratase activity","secondary_identifiers":["MetaCyc:R524-RXN","UM-BBD_reactionID:r0608"],"synonyms":[{"name":"carbamate hydro-lyase activity","type":"related"},{"name":"cyanase activity","type":"exact"},{"name":"cyanate C-N-lyase activity","type":"related"},{"name":"cyanate aminohydrolase activity","type":"related"},{"name":"cyanate hydrolase activity","type":"related"},{"name":"cyanate lyase activity","type":"exact"}],"termid":"GO:0008824"}


id: PR:Q09744
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.03c gene.","definition_xrefs":["UniProtKB:Q09744","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C12C2.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.03c","synonyms":[{"name":"Spom972h-SPBC12C2.03c","type":"exact"}],"termid":"PR:Q09744"}


id: PBO:0041942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 10","termid":"PBO:0041942"}


id: FYPO:0002478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and is curved along the long axis, and in which vacuoles are more visible (usually by microscopy) than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable curved vacuolated vegetative cell","synonyms":[{"name":"curved vacuolated viable cell","type":"exact"},{"name":"viable curved vacuolated cell during vegetative growth","type":"exact"},{"name":"viable curved vacuolated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002478"}


id: PBO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 16","termid":"PBO:0070961"}


id: FYPO:0007449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localization to ER, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007449"}


id: PBO:0018180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin involved in ubiquitin-dependent endocytosis","termid":"PBO:0018180"}


id: PBO:0078948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 6-1","termid":"PBO:0078948"}


id: PBO:0058339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4713","termid":"PBO:0058339"}


id: PBO:0075624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 1","termid":"PBO:0075624"}


id: PBO:0045173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A2","termid":"PBO:0045173"}


id: PBO:0062535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 4","termid":"PBO:0062535"}


id: PBO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2), RING domain-dependent","termid":"PBO:0015227"}


id: PR:Q9UTS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtilase-type proteinase psp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.01","synonyms":[{"name":"Spom972h-psp3","type":"exact"}],"termid":"PR:Q9UTS0"}


id: PBO:0061856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 1","termid":"PBO:0061856"}


id: PBO:0088886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase","termid":"PBO:0088886"}


id: GO:1904574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine insertion sequence binding.","definition_xrefs":["PMID:19716792","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"},{"relation_name":"is_a","term_name":"regulation of selenocysteine insertion sequence binding","termid":"GO:1904573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of selenocysteine insertion sequence binding","synonyms":[{"name":"down regulation of SECIS binding","type":"exact"},{"name":"down regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"down-regulation of SECIS binding","type":"exact"},{"name":"down-regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"downregulation of SECIS binding","type":"exact"},{"name":"downregulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"inhibition of SECIS binding","type":"narrow"},{"name":"inhibition of selenocysteine insertion sequence binding","type":"narrow"},{"name":"negative regulation of SECIS binding","type":"exact"}],"termid":"GO:1904574"}


id: PBO:0089748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex RNA helicase subunit, Gih35","termid":"PBO:0089748"}


id: PBO:0068417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renalase, FAD dependent amine oxidase","termid":"PBO:0068417"}


id: GO:1990573
data:
  {"annotated_genes":["SJAG_01353","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85683,93141],"is_not":false,"summary":null,"term":"GO:1990573"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:9139127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"potassium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010107"],"synonyms":[{"name":"potassium import","type":"broad"},{"name":"potassium ion import","type":"broad"},{"name":"potassium ion uptake","type":"broad"}],"termid":"GO:1990573","terms_by_termid":{"GO:1990573":null}}


id: GO:0032973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"amino acid export across plasma membrane","secondary_identifiers":["GO:0044746"],"synonyms":[{"name":"amino acid efflux","type":"exact"},{"name":"amino acid export","type":"broad"},{"name":"amino acid transmembrane export","type":"broad"}],"termid":"GO:0032973"}


id: PR:000050548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Ser-67/Ser-97/Ser-136, MOD:00046|Thr-55/Thr-64/Thr-214, MOD:00047.","definition_xrefs":["PMID:34133210","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/Phos(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/Phos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Ser-67/Ser-97/Ser-136, MOD:00046|Thr-55/Thr-64/Thr-214, MOD:00047","type":"narrow"},{"name":"pxl1/Phos(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050548"}


id: PBO:0073162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 antisense RNA 1","termid":"PBO:0073162"}


id: PBO:0031497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N-methyl-N'-nitro-N-nitrosoguanidine","termid":"PBO:0031497"}


id: PBO:0026805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026805"}


id: PBO:0082444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type regulatory subunit of protein phosphatase 2A (PP2A); Rts1p and Cdc55p are alternative regulatory subunits for PP2A catalytic subunits, Pph21p and Pph22p; PP2A-Rts1p protects cohesin when recruited by Sgo1p to the pericentromere; highly enriched at centromeres in the absence of Cdc55p; required for maintenance of septin ring organization during cytokinesis, for ring disassembly in G1 and for dephosphorylation of septin, Shs1p; homolog of the mammalian B' subunit of PP2A","termid":"PBO:0082444"}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: PBO:0089488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase family protein","termid":"PBO:0089488"}


id: GO:0055053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: mannose + H+ = mannose + H+.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"mannose:proton symporter activity","synonyms":[{"name":"mannose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055053"}


id: GO:0030773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxymellein + S-adenosyl-L-methionine = 6-methoxymellein + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:15201","EC:2.1.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"6-hydroxymellein O-methyltransferase activity","secondary_identifiers":["MetaCyc:6-HYDROXYMELLEIN-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R03934"],"synonyms":[{"name":"6-hydroxymellein methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:6-hydroxymellein 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030773"}


id: PATO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced virulence","synonyms":[{"name":"attenuated","type":"exact"}],"termid":"PATO:0002147"}


id: GO:0043972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 23 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K23 acetylation (obsolete GO:0043972)","synonyms":[{"name":"histone H3 acetylation at K23","type":"exact"},{"name":"histone H3K23 acetylation","type":"exact"}],"termid":"GO:0043972"}


id: PBO:0067026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 39, pseudogene","termid":"PBO:0067026"}


id: FYPO:0005634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister kinetochores become separated during the first meiotic nuclear division, and sister chromatids subsequently separate to result in equational segregation. Equational sister chromatid separation is caused by  bi-orientated attachment of sister chromatids.","definition_xrefs":["PomBase:mah","PMID:21920317","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I","termid":"FYPO:0005648"},{"relation_name":"is_a","term_name":"equational sister chromatid separation at meiosis I","termid":"FYPO:0008202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I with  equational sister chromatid  segregation in meiosis I","synonyms":[{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation and equational sister chromatid separation","type":"exact"},{"name":"abolished monopolar kinetochore attachment during meiosis I","type":"related"},{"name":"equational sister chromatid separation during first meiotic nuclear division","type":"exact"},{"name":"equational sister chromatid separation during meiosis I with split kinetochores","type":"related"},{"name":"equational sister chromatid separation in meiosis I","type":"exact"},{"name":"increased bi-orientated attachment of sister chromatids in meiosis I","type":"related"}],"termid":"FYPO:0005634"}


id: PBO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic suppressor protein Ste7","termid":"PBO:0000377"}


id: PBO:0041957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle and apoptosis regulator 1","termid":"PBO:0041957"}


id: PBO:0002995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-galactosidase, melibiase","termid":"PBO:0002995"}


id: GO:0007120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining the next site of bud emergence adjacent to the last site of bud emergence on a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0007163","GO:0000281"],"is_obsolete":false,"name":"axial cellular bud site selection","synonyms":[{"name":"axial bud site selection","type":"exact"},{"name":"axial budding","type":"broad"}],"termid":"GO:0007120"}


id: GO:1902791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of undecan-2-one.","definition_xrefs":["PMID:4950559","GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"undecan-2-one metabolic process","termid":"GO:1902790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"undecan-2-one biosynthetic process","synonyms":[{"name":"undecan-2-one anabolism","type":"exact"},{"name":"undecan-2-one biosynthesis","type":"exact"},{"name":"undecan-2-one formation","type":"exact"},{"name":"undecan-2-one synthesis","type":"exact"}],"termid":"GO:1902791"}


id: PBO:0027397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_N2-guanine_methylation","termid":"PBO:0027397"}


id: PBO:0083347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DNF1/YER166W","termid":"PBO:0083347"}


id: PBO:0069115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 364, pseudogene","termid":"PBO:0069115"}


id: PBO:0049051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 50","termid":"PBO:0049051"}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: PBO:0043745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7B","termid":"PBO:0043745"}


id: PBO:0026952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_histone_level","termid":"PBO:0026952"}


id: PBO:0063296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 3","termid":"PBO:0063296"}


id: PBO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoric ester hydrolase Ssu72 (predicted)","termid":"PBO:0001917"}


id: FYPO:0006141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"},{"relation_name":"is_a","term_name":"decreased cell population growth on gluconate carbon source","termid":"FYPO:0001830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on gluconate carbon source","synonyms":[{"name":"abolished gluconate utilization","type":"related"},{"name":"abolished growth on gluconate carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on gluconate carbon source","type":"exact"},{"name":"cell population growth on gluconate carbon source abolished","type":"exact"}],"termid":"FYPO:0006141"}


id: GO:1901074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["PMID:19402756","GOC:TermGenie","GO:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of engulfment of apoptotic cell","synonyms":[{"name":"regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901074"}


id: PBO:0013779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase Ams1 (predicted)","termid":"PBO:0013779"}


id: PBO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein","termid":"PBO:0001573"}


id: PBO:0028423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_meiosis","termid":"PBO:0028423"}


id: GO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"positively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aeciospore formation","termid":"GO:0075249"}


id: GO:0016793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a triphosphoester to give a triphosphate group and a free hydroxyl group.","definition_xrefs":["EC:3.1.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"triphosphoric monoester hydrolase activity","secondary_identifiers":["Reactome:R-HSA-8866601"],"termid":"GO:0016793"}


id: PBO:0069305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 561, pseudogene","termid":"PBO:0069305"}


id: GO:0015890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nicotinamide mononucleotide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nicotinamide mononucleotide is a ribonucleotide in which the nitrogenous base, nicotinamide, is in beta-n-glycosidic linkage with the c-1 position of D-ribose. It is a constituent of NAD and NADP.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nicotinamide mononucleotide transport","synonyms":[{"name":"nicotinamide ribonucleotide transport","type":"exact"}],"termid":"GO:0015890"}


id: PBO:0059645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 11","termid":"PBO:0059645"}


id: PR:Q09731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bun107 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBP9-binding protein bun107 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.14","synonyms":[{"name":"Spom972h-bun107","type":"exact"},{"name":"binding ubp9 protein of 107 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09731"}


id: PBO:0039102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 6","termid":"PBO:0039102"}


id: PBO:0066432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG like","termid":"PBO:0066432"}


id: PBO:0012260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0012260"}


id: GO:0018828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of HCl from a chloro- or bromopropanol, yielding an epoxypropane.","definition_xrefs":["UM-BBD_enzymeID:e0048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halohydrin hydrogen-halide-lyase activity","termid":"GO:0019181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"halohydrin hydrogen-halide-lyase A activity","termid":"GO:0018828"}


id: PBO:0088316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved membrane protein with Rossmann-like alpha/beta/alpha sandwich fold, conserved in fungi and protozoa","termid":"PBO:0088316"}


id: PBO:0001452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specificity factor (predicted)","termid":"PBO:0001452"}


id: GO:0046516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hypusine metabolic process","synonyms":[{"name":"hypusine metabolism","type":"exact"}],"termid":"GO:0046516"}


id: PBO:0063366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 6","termid":"PBO:0063366"}


id: PBO:0054723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2132","termid":"PBO:0054723"}


id: PBO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6B","termid":"PBO:0042265"}


id: GO:0141080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts an interferon-mediated signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation.","definition_xrefs":["PMID:29076073","PMID:26553469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host interferon signaling pathway","termid":"GO:0141080"}


id: GO:0060956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell differentiation","termid":"GO:0060956"}


id: PBO:0049886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 5","termid":"PBO:0049886"}


id: GO:0070607
data:
  {"annotated_genes":["SJAG_00610","SJAG_00424","SJAG_02278","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98976,91082,85614,88566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070607","terms_by_termid":{"GO:0070610":null}}


id: PBO:0062921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 8","termid":"PBO:0062921"}


id: GO:0141096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription repressor activity regulated by binding to a ligand and that inhibits the transcription of specific genes and gene sets.","definition_xrefs":["PMID:21555518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"},{"relation_name":"is_a","term_name":"ligand-activated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0001217","GO:0140110","GO:0003674","GO:0003700"],"is_obsolete":false,"name":"ligand-activated transcription repressor activity","termid":"GO:0141096"}


id: GO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mating type switching","synonyms":[{"name":"down regulation of mating type switching","type":"exact"},{"name":"down-regulation of mating type switching","type":"exact"},{"name":"downregulation of mating type switching","type":"exact"},{"name":"inhibition of mating type switching","type":"narrow"}],"termid":"GO:0031495"}


id: GO:0019618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield beta-ketoadipate.","definition_xrefs":["MetaCyc:PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate catabolic process","termid":"GO:0019619"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"protocatechuate catabolic process, ortho-cleavage","synonyms":[{"name":"3,4-dihydroxybenzoate catabolic process, ortho-cleavage","type":"exact"},{"name":"protocatechuate breakdown, ortho-cleavage","type":"exact"},{"name":"protocatechuate catabolic process to beta-ketoadipate","type":"exact"},{"name":"protocatechuate degradation, ortho-cleavage","type":"exact"}],"termid":"GO:0019618"}


id: GO:0070317
data:
  {"annotated_genes":["SJAG_03356","SJAG_03689","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95690,112103,114174],"is_not":false,"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"A cell cycle process that stops, prevents, or reduces the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of G0 to G1 transition","termid":"GO:0070316"},{"relation_name":"negatively_regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of G0 arrest","type":"exact"},{"name":"maintenance of G0 phase","type":"exact"},{"name":"maintenance of cell cycle quiescence","type":"exact"},{"name":"maintenance of cell quiescence","type":"exact"}],"termid":"GO:0070317","terms_by_termid":{"GO:0070317":null}}


id: PBO:0003569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain, implicated in splicing (predicted)","termid":"PBO:0003569"}


id: PBO:0066689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of MON1-CCZ1","termid":"PBO:0066689"}


id: GO:0033358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-L-arabinose metabolic process","termid":"GO:0033356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-L-arabinose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-63"],"synonyms":[{"name":"UDP-L-arabinose anabolism","type":"exact"},{"name":"UDP-L-arabinose biosynthesis","type":"exact"},{"name":"UDP-L-arabinose formation","type":"exact"},{"name":"UDP-L-arabinose synthesis","type":"exact"}],"termid":"GO:0033358"}


id: GO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of temperature.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermosensory behavior","synonyms":[{"name":"behavioral response to temperature stimulus","type":"exact"},{"name":"behavioural response to temperature stimulus","type":"exact"},{"name":"thermosensory behaviour","type":"exact"}],"termid":"GO:0040040"}


id: GO:0015451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Primary active transport of a solute across a membrane driven by decarboxylation of a cytoplasmic substrate. Primary active transport is catalysis of the transport of a solute across a membrane, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is driven by a primary energy source.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:3.B.-.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"decarboxylation-driven active transmembrane transporter activity","secondary_identifiers":["EC:7.2.4.5","EC:7.2.4.4","EC:7.2.4.2","EC:7.2.4.1","TC:3.B","EC:7.2.4.3"],"synonyms":[{"name":"decarboxylation-driven transporter","type":"related"}],"termid":"GO:0015451"}


id: PBO:0055287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2714","termid":"PBO:0055287"}


id: GO:0042408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of geranyl diphosphate (GPP) into the acyclic monoterpenes beta-myrcene, (E)-beta-ocimene, and other minor cyclic monoterpenes.","definition_xrefs":["GOC:cr","PMID:10700382"],"gene_count":0,"genotype_count":0,"name":"obsolete myrcene/(E)-beta-ocimene synthase activity (obsolete GO:0042408)","secondary_identifiers":["EC:4.6.-.-"],"synonyms":[{"name":"myrcene/(E)-beta-ocimene synthase activity","type":"exact"},{"name":"myrcene/ocimene synthase activity","type":"exact"}],"termid":"GO:0042408"}


id: GO:0070545
data:
  {"annotated_genes":["SJAG_02759","SJAG_00882","SJAG_02830"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96530,102110,106930],"is_not":false,"summary":null,"term":"GO:0070545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.","definition_xrefs":["GOC:mah","PMID:17353269","GOC:ab","PMID:16043514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00882":null,"SJAG_02759":null,"SJAG_02830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0030684","GO:0005634","GO:0005730"],"is_obsolete":false,"name":"PeBoW complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070545","terms_by_termid":{"GO:0070545":null}}


id: PBO:0034760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase regulatory subunit Dpm2 (predicted)","termid":"PBO:0034760"}


id: SO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence referred to by an entry in a databank such as GenBank or SwissProt.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"databank_entry","synonyms":[{"name":"accession","type":"related"},{"name":"databank entry","type":"exact"}],"termid":"SO:2000061"}


id: PR:O94644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction of telomere capping protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.02","synonyms":[{"name":"Spom972h-rtc5","type":"exact"}],"termid":"PR:O94644"}


id: PBO:0053377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 303","termid":"PBO:0053377"}


id: PBO:0038575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 1, BRCA1 A complex subunit","termid":"PBO:0038575"}


id: GO:0051016
data:
  {"annotated_genes":["SJAG_02700","SJAG_01894","SJAG_00279","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84452,88465,95030,110441],"is_not":false,"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament capping","termid":"GO:0051693"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0065003","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"barbed-end actin filament capping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"barbed-end F-actin capping activity","type":"exact"},{"name":"barbed-end actin capping activity","type":"exact"},{"name":"plus-end F-actin capping activity","type":"exact"},{"name":"plus-end actin filament capping activity","type":"exact"}],"termid":"GO:0051016","terms_by_termid":{"GO:0051016":null}}


id: PBO:0057114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200c","termid":"PBO:0057114"}


id: FYPO:0006666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a longer distance from the breaks site than normal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["GO:0000729","PomBase:mah","PMID:29697047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break processing","termid":"FYPO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased spatial extent of double-strand break processing","synonyms":[{"name":"increased spatial extent of DSB processing","type":"exact"},{"name":"increased spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"increased spatial extent of double-strand break resection","type":"exact"}],"termid":"FYPO:0006666"}


id: GO:0060022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate development","synonyms":[{"name":"palatum durum development","type":"exact"}],"termid":"GO:0060022"}


id: PBO:0066936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 238","termid":"PBO:0066936"}


id: PBO:0005373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec3","termid":"PBO:0005373"}


id: GO:0050364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + L-tryptophan = diphosphate + 4-(3-methylbut-2-enyl)-L-tryptophan.","definition_xrefs":["MetaCyc:TRYPTOPHAN-DIMETHYLALLYLTRANSFERASE-RXN","EC:2.5.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tryptophan dimethylallyltransferase activity","secondary_identifiers":["RHEA:14173"],"synonyms":[{"name":"4-(gamma,gamma-dimethylallyl)tryptophan synthase activity","type":"related"},{"name":"DMAT synthetase activity","type":"related"},{"name":"dimethylallyl-diphosphate:L-tryptophan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:L-tryptophan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:tryptophan dimethylallyl transferase activity","type":"related"},{"name":"dimethylallyltryptophan synthetase activity","type":"related"}],"termid":"GO:0050364"}


id: PBO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_subsequence","termid":"PBO:0034108"}


id: GO:2000448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"positively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"positive regulation of MIF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000448"}


id: PBO:0053136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 3","termid":"PBO:0053136"}


id: GO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near host (obsolete GO:0052125)","termid":"GO:0052125"}


id: FYPO:0002286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to osmotic stress","termid":"FYPO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to osmotic stress","synonyms":[{"name":"decreased RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"decreased transcript level during cellular response to osmotic stress","type":"exact"},{"name":"reduced RNA level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002286"}


id: PBO:0065096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 3","termid":"PBO:0065096"}


id: PBO:0079040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-2","termid":"PBO:0079040"}


id: PBO:0064640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase","termid":"PBO:0064640"}


id: GO:0102774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 4-coumaryl-CoA + 3 malonyl-CoA( = p-coumaroyltriacetic acid lactone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"p-coumaroyltriacetic acid lactone synthase activity","secondary_identifiers":["MetaCyc:RXN-7822"],"termid":"GO:0102774"}


id: SO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:downstream","type":"related"},{"name":"Jannovar:downstream_gene_variant","type":"exact"},{"name":"VEP:downstream_gene_variant","type":"exact"},{"name":"downstream gene variant","type":"exact"},{"name":"snpEff:DOWNSTREAM","type":"exact"}],"termid":"SO:0001632"}


id: PBO:0075278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 3","termid":"PBO:0075278"}


id: PBO:0081433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285C, pseudogene","termid":"PBO:0081433"}


id: FYPO:0006401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more 2'-deoxyribonucleoside triphosphates (dNTPs) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular dNTP level","synonyms":[{"name":"decreased cellular dNTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dNTP level during vegetative growth","type":"exact"},{"name":"decreased dNTP accumulation","type":"related"},{"name":"reduced cellular dNTP level","type":"exact"}],"termid":"FYPO:0006401"}


id: PR:Q9USW9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgf29 gene.","definition_xrefs":["UniProtKB:Q9USW9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA-associated factor 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.07c","synonyms":[{"name":"Spom972h-sgf29","type":"exact"}],"termid":"PR:Q9USW9"}


id: PBO:0042303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD14 molecule","termid":"PBO:0042303"}


id: GO:1903666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asexual reproduction.","definition_xrefs":["PMID:24390142","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asexual reproduction","synonyms":[{"name":"activation of asexual reproduction","type":"narrow"},{"name":"up regulation of asexual reproduction","type":"exact"},{"name":"up-regulation of asexual reproduction","type":"exact"},{"name":"upregulation of asexual reproduction","type":"exact"}],"termid":"GO:1903666"}


id: GO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pseudohyphal septin ring assembly.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of pseudohyphal septin ring assembly","termid":"GO:0062164"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"negative regulation of pseudohyphal septin ring assembly","termid":"GO:0062166"}


id: GO:2000848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"positively_regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of corticosteroid hormone secretion","synonyms":[{"name":"positive regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000848"}


id: GO:0120053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-xylose + D-ribitol 5-phosphate-R = UDP + beta1,4-xylosyl-D-ribitol 5-phosphate-R.","definition_xrefs":["PMID:27733679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"ribitol beta-1,4-xylosyltransferase activity","termid":"GO:0120053"}


id: PBO:0059506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase II","termid":"PBO:0059506"}


id: PBO:0075474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 25","termid":"PBO:0075474"}


id: FYPO:0002208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a larger volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spore","termid":"FYPO:0002207"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen spore with abnormal shape","secondary_identifiers":["FYPO:0002205"],"synonyms":[{"name":"inviable enlarged spore with abnormal shape","type":"related"},{"name":"inviable large spore with abnormal shape","type":"related"},{"name":"inviable spore with increased size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with increased volume and abnormal shape","type":"exact"},{"name":"inviable swollen abnormally shaped spore","type":"exact"},{"name":"inviable swollen misshapen spore","type":"related"},{"name":"lethal; swollen spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, enlarged spore with abnormal shape","type":"related"},{"name":"spore germination abolished, large spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell volume","type":"exact"},{"name":"spore germination abolished, swollen misshapen spores","type":"related"},{"name":"spore germination abolished, swollen spore with abnormal shape","type":"related"}],"termid":"FYPO:0002208"}


id: PBO:0090110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferasetRNA Trm44","termid":"PBO:0090110"}


id: GO:0034908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-N-isopropylacetanilide + O2 + 2 H+ + NADH = 2-chloro-N-isopropylacetamide + catechol + NAD+.","definition_xrefs":["UM-BBD_reactionID:r0724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-chloro-N-isopropylacetanilide 1,2-dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0034908"}


id: GO:2001158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amine catabolic process","termid":"GO:0033243"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"is_a","term_name":"positive regulation of proline metabolic process","termid":"GO:2000216"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"positively_regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of proline catabolic process to glutamate","synonyms":[{"name":"positive regulation of proline breakdown to glutamate","type":"exact"},{"name":"positive regulation of proline degradation to glutamate","type":"exact"},{"name":"positive regulation of proline oxidation","type":"related"}],"termid":"GO:2001158"}


id: SO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a serine anticodon, and a 3' serine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"serine_tRNA_primary_transcript","termid":"SO:0000226"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl_tRNA","synonyms":[{"name":"seryl tRNA","type":"exact"},{"name":"seryl-transfer RNA","type":"exact"},{"name":"seryl-transfer ribonucleic acid","type":"related"}],"termid":"SO:0000269"}


id: PBO:0074544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SND1 intronic transcript 1","termid":"PBO:0074544"}


id: GO:1904625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["PMID:22988142","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glycinergic","termid":"GO:0060093"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"negatively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glycine secretion, neurotransmission","synonyms":[{"name":"down regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"downregulation of glycine secretion, neurotransmission","type":"exact"},{"name":"inhibition of glycine secretion, neurotransmission","type":"narrow"}],"termid":"GO:1904625"}


id: PBO:0024483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Crs103 (predicted)","termid":"PBO:0024483"}


id: GO:0031327
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id: PBO:0027632
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id: GO:0045986
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id: PR:Q9P7S1
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23G3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain-containing protein C23G3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.12c","synonyms":[{"name":"Spom972h-SPAC23G3.12c","type":"exact"}],"termid":"PR:Q9P7S1"}


id: PBO:0081435
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id: GO:1904658
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id: PBO:0064734
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id: FYPO:0003322
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id: PBO:0052667
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id: PBO:0042119
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 191","termid":"PBO:0042119"}


id: PBO:0028264
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id: PBO:0067472
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id: GO:1903433
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id: GO:0014850
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id: PBO:0072261
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id: PBO:0086137
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id: PBO:0066474
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 1","termid":"PBO:0066474"}


id: PBO:0062672
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id: PBO:0078909
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id: PBO:0031855
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id: GO:0098524
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id: GO:1903518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single strand break repair.","definition_xrefs":["GOC:BHF","GOC:rl","GO_REF:0000058","GOC:TermGenie","PMID:17395247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"positively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of single strand break repair","synonyms":[{"name":"activation of single strand break repair","type":"narrow"},{"name":"up regulation of single strand break repair","type":"exact"},{"name":"up-regulation of single strand break repair","type":"exact"},{"name":"upregulation of single strand break repair","type":"exact"}],"termid":"GO:1903518"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: GO:0042588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, cytoplasmic secretory granule found in enzyme-secreting cells and visible by light microscopy. Contain zymogen, an inactive enzyme precursor, often of a digestive enzyme.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"zymogen granule","termid":"GO:0042588"}


id: PBO:0053393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 322","termid":"PBO:0053393"}


id: GO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing a cleistothecium, a closed sexual fruiting body that contains ascospores in linear asci. Cleistothecia are present in some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:30410052","PMID:20348388","PMID:28889020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium formation","termid":"GO:0062248"}


id: PR:O14015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug108 gene.","definition_xrefs":["UniProtKB:O14015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 108 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.12c","synonyms":[{"name":"Spom972h-mug108","type":"exact"}],"termid":"PR:O14015"}


id: PBO:0068034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 339","termid":"PBO:0068034"}


id: PR:Q09175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- krp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dibasic-processing endoprotease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.09c","synonyms":[{"name":"KEX2-related protease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-krp1","type":"exact"}],"termid":"PR:Q09175"}


id: GO:0046236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandelate metabolic process","termid":"GO:0018924"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mandelate biosynthetic process","synonyms":[{"name":"mandelate anabolism","type":"exact"},{"name":"mandelate biosynthesis","type":"exact"},{"name":"mandelate formation","type":"exact"},{"name":"mandelate synthesis","type":"exact"}],"termid":"GO:0046236"}


id: PBO:0027740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cell_tip_during_cellular_response_to_salt_stress","termid":"PBO:0027740"}


id: GO:0071024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains spliced leader (SL) RNA and associated proteins.","definition_xrefs":["ISBN:0879697393","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"SL snRNP","termid":"GO:0071024"}


id: GO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains two cell adhesion molecules, a protocadherin-alpha and a protocadherin-gamma, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}


id: GO:0045969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone biosynthetic process","termid":"GO:0007557"},{"relation_name":"is_a","term_name":"positive regulation of juvenile hormone metabolic process","termid":"GO:0045929"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"activation of juvenile hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of juvenile hormone anabolism","type":"exact"},{"name":"positive regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"positive regulation of juvenile hormone formation","type":"exact"},{"name":"positive regulation of juvenile hormone synthesis","type":"exact"},{"name":"stimulation of juvenile hormone biosynthetic process","type":"narrow"},{"name":"up regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"up-regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"upregulation of juvenile hormone biosynthetic process","type":"exact"}],"termid":"GO:0045969"}


id: GO:0030123
data:
  {"annotated_genes":["SJAG_04931","SJAG_02453","SJAG_03726","SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85088,90328,92275,107610],"is_not":false,"summary":null,"term":"GO:0030123"}]},"cv_name":"cellular_component","definition":"A heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. AP-3 does not appear to associate with clathrin in all organisms. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).","definition_xrefs":["PMID:10611976","PMID:21097499","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_02453":null,"SJAG_03726":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"AP-3 adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030123","terms_by_termid":{"GO:0030123":null}}


id: GO:2001145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphatase activity","termid":"GO:0010923"},{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001145"}


id: PBO:0086957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of peroxisome abundance; peroxisomal membrane protein, remote homolog to several curvature-generating human proteins; functionally interacts with vesicle-budding-inducing ADP-ribosylation factor Arf1p","termid":"PBO:0086957"}


id: FYPO:0001313
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[115626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, or morphology of a cell part is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal subcellular component during vegetative growth","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal subcellular component during mitotic cell cycle","type":"related"},{"name":"normal subcellular structure during vegetative growth","type":"related"}],"termid":"FYPO:0001313","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: PBO:0026652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_zinc_ion","termid":"PBO:0026652"}


id: PBO:0043328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 2","termid":"PBO:0043328"}


id: PBO:0066889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 189","termid":"PBO:0066889"}


id: GO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-threonine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine modification","termid":"GO:0018210"}


id: PBO:0039029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 5","termid":"PBO:0039029"}


id: SO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose function has something in common biologically with the trait under investigation.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_candidate_gene","synonyms":[{"name":"functional candidate gene","type":"exact"},{"name":"functional target gene","type":"exact"}],"termid":"SO:0001869"}


id: PBO:0058174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4469","termid":"PBO:0058174"}


id: PR:P87048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03448","PANTHER:PTHR10943:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.03c","secondary_identifiers":["UniProtKB:P87048"],"synonyms":[{"name":"19S regulatory cap region of 26S protease subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PSMD2","type":"exact"},{"name":"proteasome non-ATPase subunit mts4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87048"}


id: PBO:0082243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of farnesyltransferase and geranylgeranyltransferase-I; farnesyltransferase (Ram2p-Ram1p heterodimer) catalyzes the addition of 15-carbon isoprenoid farnesyl to substrate proteins containing a CAAX consensus motif; type I geranylgeranyltransferase (Ram2p-Cdc43p heterodimer) catalyzes the addition of the 20-carbon isoprenoid geranylgeranyl to substrate proteins containing a CaaL consensus motif; required for membrane localization of Ras proteins and a-factor","termid":"PBO:0082243"}


id: GO:0047221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + UDP-D-galactose = 2-(alpha-D-galactosyl)-sn-glycerol 3-phosphate + H+ + UDP.","definition_xrefs":["EC:2.4.1.137","RHEA:14285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sn-glycerol-3-phosphate 2-alpha-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00853","MetaCyc:2.4.1.137-RXN"],"synonyms":[{"name":"FPS","type":"related"},{"name":"UDP-galactose, sn-3-glycerol phosphate:1->2' galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:sn-glycerol-3-phosphate 2-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:sn-glycerol-3-phosphate-2-D-galactosyl transferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate 2-alpha-D-galactosyltransferase activity","type":"related"},{"name":"floridoside phosphate synthase activity","type":"related"},{"name":"floridoside phosphate synthetase activity","type":"related"},{"name":"floridoside-phosphate synthase activity","type":"related"}],"termid":"GO:0047221"}


id: PBO:0034595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034595"}


id: PBO:0077846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polyglutamylase complex subunit 2","termid":"PBO:0077846"}


id: GO:0060724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular messenger, and in cooperation with a primary EGF receptor, initiating a change in cell activity through the EGF receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060724)","synonyms":[{"name":"coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060724"}


id: PBO:0109347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM8A pseudogene 1","termid":"PBO:0109347"}


id: GO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH3 + CO2 = ADP + carbamoyl phosphate.","definition_xrefs":["EC:2.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbamate kinase activity","secondary_identifiers":["MetaCyc:CARBAMATE-KINASE-RXN","RHEA:10152"],"synonyms":[{"name":"ATP:carbamate phosphotransferase activity","type":"related"},{"name":"CKase activity","type":"related"},{"name":"carbamoyl phosphokinase activity","type":"related"},{"name":"carbamyl phosphokinase activity","type":"related"}],"termid":"GO:0008804"}


id: PBO:0089764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","termid":"PBO:0089764"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: PBO:0059600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 12","termid":"PBO:0059600"}


id: PBO:0058097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4313","termid":"PBO:0058097"}


id: PBO:0061039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA magnesium transporter 2","termid":"PBO:0061039"}


id: PBO:0075115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 164","termid":"PBO:0075115"}


id: GO:0019991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a septate junction, an intercellular junction found in invertebrate epithelia that is characterized by a ladder like appearance in electron micrographs and thought to provide structural strength and to provide a barrier to diffusion of solutes through the intercellular space.","definition_xrefs":["GOC:ai","PMID:5272312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"septate junction assembly","termid":"GO:0019991"}


id: PBO:0048469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 2","termid":"PBO:0048469"}


id: PBO:0091782
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing protein","termid":"PBO:0091782"}


id: PBO:0004801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase (predicted)","termid":"PBO:0004801"}


id: GO:0016987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sigma factors act as the promoter specificity subunit of eubacterial and plant plastid multisubunit RNA polymerases, whose core subunit composition is often described as alpha(2)-beta-beta-prime. Although sigma does not bind DNA on its own, when combined with the core to form the holoenzyme, the sigma factor binds specifically to promoter elements. The sigma subunit is released once elongation begins.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003700","GO:0003674","GO:0140110"],"is_obsolete":false,"name":"sigma factor activity","secondary_identifiers":["GO:0000996","GO:0001053"],"synonyms":[{"name":"DNA-dependent RNA polymerase promoter selection factor","type":"exact"},{"name":"bacterial sigma factor activity","type":"narrow"},{"name":"core DNA-dependent RNA polymerase binding promoter specificity activity","type":"exact"},{"name":"plastid sigma factor activity","type":"narrow"},{"name":"promoter selection factor activity","type":"narrow"},{"name":"sigma transcription factor","type":"exact"}],"termid":"GO:0016987"}


id: PBO:0041370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4orf46 pseudogene 2","termid":"PBO:0041370"}


id: PBO:0053801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1056","termid":"PBO:0053801"}


id: GO:1905716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cornification.","definition_xrefs":["PMID:26014679","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"negatively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cornification","synonyms":[{"name":"down regulation of cornification","type":"exact"},{"name":"down-regulation of cornification","type":"exact"},{"name":"downregulation of cornification","type":"exact"},{"name":"inhibition of cornification","type":"narrow"}],"termid":"GO:1905716"}


id: GO:0019926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-tryptophan to form tryptophan-6,7-dione, otherwise known as tryptophyl quinone, which is further modified by cross-linking to either tryptophan or cysteine.","definition_xrefs":["PMID:2028257","RESID:AA0148"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan oxidation to tryptophyl quinone (obsolete GO:0019926)","termid":"GO:0019926"}


id: GO:0003871
data:
  {"annotated_genes":["SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96796],"is_not":false,"summary":null,"term":"GO:0003871"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate.","definition_xrefs":["EC:2.1.1.14","RHEA:21196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity","termid":"GO:0042085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOCYSMET-RXN","KEGG_REACTION:R04405"],"synonyms":[{"name":"5-methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"MetE","type":"related"},{"name":"cobalamin-independent methionine synthase activity","type":"related"},{"name":"homocysteine methylase activity","type":"related"},{"name":"methionine synthase (cobalamin-independent) activity","type":"related"},{"name":"methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase activity","type":"related"},{"name":"methyltransferase, tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroyltriglutamate methyltransferase activity","type":"related"}],"termid":"GO:0003871","terms_by_termid":{"GO:0003871":null}}


id: PBO:0041418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 beta chain","termid":"PBO:0041418"}


id: PBO:0038580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1 pseudogene 1","termid":"PBO:0038580"}


id: GO:0048733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland development","termid":"GO:0048733"}


id: GO:0120026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host cell membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively.","definition_xrefs":["PMID:24965475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell projection","termid":"GO:0044157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell uropod","synonyms":[{"name":"host cell uropodium","type":"exact"}],"termid":"GO:0120026"}


id: PBO:0004497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Nca2 (predicted)","termid":"PBO:0004497"}


id: GO:0140625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the opioid growth factor (OGF, met-enkephalin) and transmitting the signal across the nuclear membrane. Met-enkephalin is an endogenous opioid peptide that binds to opioid and opioid growth factor receptors, regulating tissue growth in a variety of cellular processes.","definition_xrefs":["PMID:11890982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"opioid growth factor receptor activity","synonyms":[{"name":"met-enkephalin receptor activity","type":"related"},{"name":"metenkefalin receptor activity","type":"related"},{"name":"methionine enkephalin receptor activity","type":"exact"}],"termid":"GO:0140625"}


id: PBO:0038938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 2","termid":"PBO:0038938"}


id: GO:0043513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-B subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"inhibin B complex","termid":"GO:0043513"}


id: MOD:02012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a oleoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"oleoylated residue","termid":"MOD:02012"}


id: PBO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 5' to 3' DNA/RNA helicase Sen1","termid":"PBO:0001974"}


id: PBO:0026808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_micafungin","termid":"PBO:0026808"}


id: GO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octanol, the 8-carbon alcohol with the formula C8H17OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanol metabolic process","termid":"GO:0006070"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"octanol biosynthetic process","synonyms":[{"name":"octanol anabolism","type":"exact"},{"name":"octanol biosynthesis","type":"exact"},{"name":"octanol formation","type":"exact"},{"name":"octanol synthesis","type":"exact"}],"termid":"GO:0046171"}


id: FYPO:0007655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at one or more specific sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:33511417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"increased nucleosome occupancy","synonyms":[{"name":"increased nucleosome occupancy during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy during vegetative growth","type":"exact"}],"termid":"FYPO:0007655"}


id: PBO:0036182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0036182"}


id: FYPO:0004259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["GO:0007095","PMID:21098122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abolished G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004259"}


id: GO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"C5a anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5a anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031714"}


id: PBO:0066464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2","termid":"PBO:0066464"}


id: PBO:0083479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1","termid":"PBO:0083479"}


id: PBO:0039042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 4","termid":"PBO:0039042"}


id: PBO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase/uracil phosphoribosyltransferase (predicted)","termid":"PBO:0005546"}


id: GO:1905046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:22393241","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Schwann cell proliferation","termid":"GO:0010625"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"positively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"activation of Schwann cell proliferation involved in axon regeneration","type":"narrow"},{"name":"up regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"up-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"upregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"}],"termid":"GO:1905046"}


id: GO:2000106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte apoptotic process","synonyms":[{"name":"regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000106"}


id: PBO:0073475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGCE pseudogene 1","termid":"PBO:0073475"}


id: PR:Q9HFE7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ankyrin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03046","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat-containing protein P16F5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.05c","secondary_identifiers":["UniProtKB:Q9HFE7"],"synonyms":[{"name":"Spom972h-ANK2","type":"exact"}],"termid":"PR:Q9HFE7"}


id: PBO:0015678
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High Copy Sterile","termid":"PBO:0015678"}


id: FYPO:0006533
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115320,115321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115303,115299,115292,115291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to cell periphery","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell periphery","type":"exact"}],"termid":"FYPO:0006533","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: MOD:01726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01726"}


id: PBO:0071289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 12","termid":"PBO:0071289"}


id: GO:0120025
data:
  {"annotated_genes":["SJAG_04703","SJAG_03688","SJAG_03444","SJAG_00677","SJAG_01215","SJAG_04723","SJAG_00700","SJAG_03646","SJAG_02924","SJAG_03357","SJAG_01171","SJAG_04509","SJAG_03453","SJAG_05285","SJAG_01769","SJAG_01732","SJAG_04001","SJAG_03011","SJAG_03596","SJAG_00870","SJAG_04901","SJAG_00185","SJAG_02351","SJAG_04982","SJAG_00938","SJAG_01888","SJAG_00514","SJAG_01978","SJAG_01943","SJAG_02718","SJAG_00667","SJAG_05001","SJAG_04470","SJAG_02169","SJAG_02222","SJAG_01017","SJAG_02228","SJAG_04887","SJAG_01794","SJAG_02989","SJAG_04781","SJAG_01993","SJAG_00663","SJAG_02700","SJAG_02486","SJAG_04100","SJAG_03145","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88646,107481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005937"},{"annotations":[104188,115510,87002,85273,91509,110739,88647,89966,90163,95676,96270,98069,98070,112297,91427,84473,104248,107431],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[84332,95108],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[90643,96234,102117,112086],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[111930,114719,91428,91510,92508,88648,86881,85274,84078,94059,104964,95026,106317,86838,89616,86032,93863,99379,102972,103002,105181,88716,103275,110440,102210,93007,97320,107987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[92509,106318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"A prolongation or process extending from a cell and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plasma membrane bounded cell projection","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0120025","terms_by_termid":{"GO:0005937":null,"GO:0032175":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0109827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex LRR repeat subunit Tel2","termid":"PBO:0109827"}


id: PBO:0004854
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.18","termid":"PBO:0004854"}


id: PBO:0042267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 2","termid":"PBO:0042267"}


id: GO:1900528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in G1 to G0 transition.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:19366728"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in G1 to G0 transition (obsolete GO:1900528)","synonyms":[{"name":"regulation of cell shape involved in G1 to G0 transition","type":"exact"},{"name":"regulation of cell shape involved in G1/G0 transition","type":"exact"},{"name":"regulation of cell shape involved in cell cycle quiescence","type":"related"},{"name":"regulation of cell shape involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of cell shape involved in stationary phase","type":"related"}],"termid":"GO:1900528"}


id: GO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"negatively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of stress fiber assembly","synonyms":[{"name":"down regulation of stress fiber formation","type":"related"},{"name":"down-regulation of stress fiber formation","type":"exact"},{"name":"downregulation of stress fiber formation","type":"related"},{"name":"inhibition of stress fiber formation","type":"narrow"},{"name":"negative regulation of stress fibre biosynthesis","type":"related"},{"name":"negative regulation of stress fibre formation","type":"related"}],"termid":"GO:0051497"}


