# terms

id: GO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070758"}


id: PBO:0081165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein X-linked","termid":"PBO:0081165"}


id: PBO:0075868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 8","termid":"PBO:0075868"}


id: MOD:00356
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(4a-FMN)-L-cysteine.","definition_xrefs":["PubMed:12668455","RESID:AA0351","PubMed:12846567","PubMed:7692961","Unimod:443#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(4a-FMN)-L-cysteine","synonyms":[{"name":"S-(4a-FMN)-L-cysteine","type":"exact"},{"name":"(R)-2-amino-3-(4a-riboflavin 5'-dihydrogen phosphate)sulfanylpropanoic acid","type":"exact"},{"name":"4a-(S-cysteinyl)FMN","type":"exact"},{"name":"4a-(S-cysteinyl)flavin mononucleotide","type":"exact"},{"name":"FMNC","type":"related"},{"name":"MOD_RES S-4a-FMN cysteine","type":"exact"},{"name":"S-(4a-FMN)","type":"related"},{"name":"S4aFMNCys","type":"exact"}],"termid":"MOD:00356"}


id: PBO:0076958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 1","termid":"PBO:0076958"}


id: PBO:0039978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 1","termid":"PBO:0039978"}


id: MOD:00742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a copper atom or a cluster containing copper for hydrogen atoms, or that coordinates a copper ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper containing modified residue","synonyms":[{"name":"CuRes","type":"exact"}],"termid":"MOD:00742"}


id: GO:0070326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a very-low-density lipoprotein receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor binding","termid":"GO:0070325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"very-low-density lipoprotein particle receptor binding","synonyms":[{"name":"VLDL receptor binding","type":"exact"},{"name":"VLDLR binding","type":"exact"},{"name":"apolipoprotein E receptor binding","type":"related"},{"name":"very-low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:0070326"}


id: GO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from diapause","termid":"GO:0071981"}


id: GO:1905852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of backward locomotion.","definition_xrefs":["PMID:11717360","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"positively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of backward locomotion","synonyms":[{"name":"activation of backward locomotion","type":"narrow"},{"name":"up regulation of backward locomotion","type":"exact"},{"name":"up-regulation of backward locomotion","type":"exact"},{"name":"upregulation of backward locomotion","type":"exact"}],"termid":"GO:1905852"}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: PBO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 11","termid":"PBO:0070956"}


id: PBO:0108971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 2C","termid":"PBO:0108971"}


id: MOD:01488
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532#Y","OMSSA:169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ114Y","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01488"}


id: PBO:0012242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 6 subunit Pre5 (predicted)","termid":"PBO:0012242"}


id: PBO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036052"}


id: GO:2000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"positively_regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid transport","termid":"GO:2000193"}


id: GO:1905602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22848640","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular cholesterol transport","termid":"GO:0032385"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:1905600"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"activation of receptor-mediated endocytosis involved in cholesterol transport","type":"narrow"},{"name":"activation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905602"}


id: PBO:0088275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein, anillin Mid2","termid":"PBO:0088275"}


id: PBO:0112753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3, Agm3","termid":"PBO:0112753"}


id: PBO:0081172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 2","termid":"PBO:0081172"}


id: GO:0034763
data:
  {"annotated_genes":["SJAG_03631","SJAG_03970","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87368,109485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[84284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[84285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane transport","type":"exact"},{"name":"inhibition of transmembrane transport","type":"narrow"},{"name":"negative regulation of membrane transport","type":"exact"}],"termid":"GO:0034763","terms_by_termid":{"GO:1905530":null,"GO:1905533":null,"GO:1905949":null}}


id: PBO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nyctalopin","termid":"PBO:0061754"}


id: PBO:0034651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0034651"}


id: GO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that modulates the frequency, rate or extent or transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0046019)","synonyms":[{"name":"regulation of transcription from Pol II promoter by pheromones","type":"exact"}],"termid":"GO:0046019"}


id: PBO:0056429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 2","termid":"PBO:0056429"}


id: PBO:0068354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 135","termid":"PBO:0068354"}


id: PBO:0066532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 8","termid":"PBO:0066532"}


id: PBO:0077467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 186","termid":"PBO:0077467"}


id: GO:0046617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of nucleolar expansion, as seen in Saccharomyces.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar size increase (sensu Saccharomyces) (obsolete GO:0046617)","synonyms":[{"name":"nucleolar size increase (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046617"}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: GO:2000917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucuronoxylan catabolic process","synonyms":[{"name":"positive regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000917"}


id: GO:1990031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Dense plexus formed by the descending collaterals of cerebellar basket cells that wrap around a Purkinje cell axonal initial segment.","definition_xrefs":["NIF_Subcellular:sao109906988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pinceau fiber","termid":"GO:1990031"}


id: GO:1901939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-exo-alpha-bergamotene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"(-)-exo-alpha-bergamotene metabolic process","termid":"GO:1901938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene catabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene breakdown","type":"exact"},{"name":"(-)-exo-alpha-bergamotene catabolism","type":"exact"},{"name":"(-)-exo-alpha-bergamotene degradation","type":"exact"}],"termid":"GO:1901939"}


id: GO:0099100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A cation channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G-protein gated monoatomic ion channel activity","termid":"GO:0099099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"G-protein gated monoatomic cation channel activity","synonyms":[{"name":"G-protein gated cation channel activity","type":"broad"}],"termid":"GO:0099100"}


id: PBO:0063785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 10 pseudogene 1","termid":"PBO:0063785"}


id: PBO:0083142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of verified gene NUP53/YMR153W","termid":"PBO:0083142"}


id: FYPO:0004297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more than one septum when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"multiseptate cell in stationary phase","termid":"FYPO:0004297"}


id: PBO:0024858
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along double-stranded DNA","termid":"PBO:0024858"}


id: PR:P87145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein VAC14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16023:SF0","PRO:DNx","OMA:SCHPO03640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein VAC14 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.03","secondary_identifiers":["UniProtKB:P87145"],"synonyms":[{"name":"Spom972h-VAC14","type":"exact"}],"termid":"PR:P87145"}


id: PBO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 8 domain containing 2","termid":"PBO:0048726"}


id: PBO:0086286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in cellular adhesion and filamentous growth; similar to Tmn3p; member of the evolutionarily conserved Transmembrane Nine family of proteins with nine membrane-spanning segments; TMN2 has a paralog, EMP70, that arose from the whole genome duplication","termid":"PBO:0086286"}


id: PBO:0034435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_elongated_cell_with_enlarged_nucleus","termid":"PBO:0034435"}


id: PBO:0077314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 1","termid":"PBO:0077314"}


id: PBO:0088268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1","termid":"PBO:0088268"}


id: PBO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 2","termid":"PBO:0060780"}


id: PBO:0046903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member B, pseudogene","termid":"PBO:0046903"}


id: PBO:0074571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 27","termid":"PBO:0074571"}


id: PATO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of dark orange, red, of very low intensity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Brown"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown","termid":"PATO:0000952"}


id: PBO:0088147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; imports large neutral amino acids into the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088147"}


id: PBO:0110373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPA3 pseudogene 17","termid":"PBO:0110373"}


id: FYPO:0006639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal diameter (thickness; width).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal vegetative cell diameter","synonyms":[{"name":"normal cell diameter during vegetative growth","type":"exact"},{"name":"normal vegetative cell diameter during mitotic cell cycle","type":"related"},{"name":"normal vegetative cell thickness","type":"exact"},{"name":"normal vegetative cell width","type":"exact"}],"termid":"FYPO:0006639"}


id: PBO:0039865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 27","termid":"PBO:0039865"}


id: GO:0052373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents, or reduces the frequency, rate or extent to which it enters into a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression of symbiont entry into host","synonyms":[{"name":"down regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"down-regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"downregulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"inhibition by organism of entry into other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"negative regulation by organism of entry into other organism involved in symbiotic interaction","type":"broad"},{"name":"suppression of symbiont entry into host by host","type":"exact"}],"termid":"GO:0052373"}


id: PR:P37382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04821","PANTHER:PTHR11800:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.10c","secondary_identifiers":["UniProtKB:P37382"],"synonyms":[{"name":"DNA-directed RNA polymerase II 33 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2C","type":"exact"}],"termid":"PR:P37382"}


id: FYPO:0008243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is abnormal during sporulation.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiotic cell cycle","termid":"FYPO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear morphology during sporulation","termid":"FYPO:0008243"}


id: GO:0075001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an infection structure of the symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont infection structure to host","synonyms":[{"name":"adhesion of symbiont infection structure to host during symbiotic interaction","type":"exact"},{"name":"attachment of symbiont infection structure to host","type":"exact"}],"termid":"GO:0075001"}


id: PBO:0028410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cadmium_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028410"}


id: PBO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, CENP-I ortholog Mis6","termid":"PBO:0000674"}


id: PBO:0078964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 3-1","termid":"PBO:0078964"}


id: PBO:0080143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1","termid":"PBO:0080143"}


id: GO:0032351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"negatively_regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hormone metabolic process","synonyms":[{"name":"down regulation of hormone metabolic process","type":"exact"},{"name":"down-regulation of hormone metabolic process","type":"exact"},{"name":"downregulation of hormone metabolic process","type":"exact"},{"name":"inhibition of hormone metabolic process","type":"narrow"},{"name":"negative regulation of hormone metabolism","type":"exact"}],"termid":"GO:0032351"}


id: FYPO:0001660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered cellular cAMP level","termid":"FYPO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular cAMP level","synonyms":[{"name":"decreased cellular cAMP accumulation","type":"related"},{"name":"decreased cellular cyclic AMP level","type":"exact"},{"name":"reduced cellular cAMP level","type":"exact"}],"termid":"FYPO:0001660"}


id: PBO:0085127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein found in preribosomal complexes; contains an RNA recognition motif (RRM); relative distribution to the nucleolus increases upon DNA replication stress","termid":"PBO:0085127"}


id: PBO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1748 family protein","termid":"PBO:0002015"}


id: PBO:0074374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 divergent transcript","termid":"PBO:0074374"}


id: PBO:0090904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-14 sterol reductase Erg24","termid":"PBO:0090904"}


id: GO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low humidity","termid":"GO:0090547"}


id: PBO:0089019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup132","termid":"PBO:0089019"}


id: GO:1901204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901204)","synonyms":[{"name":"regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901204"}


id: PBO:0071717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 15","termid":"PBO:0071717"}


id: PBO:0042796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 250","termid":"PBO:0042796"}


id: SO:0001379
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_taurinomethyl_2_thiouridineis a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_taurinomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:099"],"synonyms":[{"name":"5-taurinomethyl-2-thiouridine","type":"exact"},{"name":"five taurinomethyl two thiouridine","type":"exact"},{"name":"tm5s2U","type":"exact"}],"termid":"SO:0001379"}


id: FYPO:0006028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:11694585","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to actin cortical patch","termid":"FYPO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actin cortical patch, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin patch, with protein mislocalized to cytoplasm","type":"exact"},{"name":"reduced protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0006028"}


id: PBO:0044229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 3","termid":"PBO:0044229"}


id: PBO:0081625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 555","termid":"PBO:0081625"}


id: PBO:0075861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 9, pseudogene","termid":"PBO:0075861"}


id: PBO:0049443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 1","termid":"PBO:0049443"}


id: GO:2000641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"}


id: GO:0035630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition of hydroxyapatite, involved in the progression of the skeleton from its formation to its mature state.","definition_xrefs":["GOC:BHF","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone mineralization","termid":"GO:0030282"},{"relation_name":"part_of","term_name":"ossification involved in bone maturation","termid":"GO:0043931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}


id: SO:0000568
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter that can allow for transcription in both directions.","definition_xrefs":["SO:ke","PMID:21601935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter","synonyms":[{"name":"bidirectional promoter","type":"exact"}],"termid":"SO:0000568"}


id: PBO:0062758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 3 pseudogene","termid":"PBO:0062758"}


id: FYPO:0003025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased. Synapsis is the process in which the side by side pairing and physical juxtaposition of homologous chromosomes is established and maintained. Pairing may be assayed globally or at one or more specific loci.","definition_xrefs":["PomBase:mah","GO:0007129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased homologous chromosome pairing","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased synapsis","type":"exact"},{"name":"reduced homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003025"}


id: GO:0039720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed by Baculoviruses. A vesicular structure in which virions are assembled.","definition_xrefs":["PMID:1433508","VZ:1951","PMID:13358757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virogenic stroma","synonyms":[{"name":"VS","type":"exact"}],"termid":"GO:0039720"}


id: GO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK during sporulation (sensu Saccharomyces) (obsolete GO:0000205)","synonyms":[{"name":"activation of MAPK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000205"}


id: PBO:0089372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase Gud1","termid":"PBO:0089372"}


id: FYPO:0000102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cisplatin. Cells stop growing (and may die) at a concentration of cisplatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cisplatin","synonyms":[{"name":"hypersensitive to cisplatin","type":"exact"},{"name":"sensitive to DDP","type":"broad"},{"name":"sensitive to cis-DDP","type":"exact"},{"name":"sensitive to cisplatin during mitotic cell cycle","type":"related"},{"name":"sensitive to cisplatin during vegetative growth","type":"exact"}],"termid":"FYPO:0000102"}


id: GO:0060542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of strand invasion","termid":"GO:0060542"}


id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: PBO:0029657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0029657"}


id: GO:0098842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An early endosome of the postsynapse. It acts as the major sorting station on the endocytic pathway, targeting neurotransmitter receptors for degregation or recycling.","definition_xrefs":["PMID:19603039","PMID:20820847","PMID:24727350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome","termid":"GO:0005769"},{"relation_name":"is_a","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"postsynaptic early endosome","termid":"GO:0098842"}


id: GO:0140480
data:
  {"annotated_genes":["SJAG_01460","SJAG_03200","SJAG_04558","SJAG_01422","SJAG_02332","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86301,96724,98948,99588,107552,108964],"is_not":false,"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which the duplicated mitotic spindle pole body is inserted into a fenestra which opens in the nuclear envelope in early mitosis, and is subsequently tethered to the membrane.","definition_xrefs":["PMID:19487457","PMID:24529240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body localization","termid":"GO:1990608"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle pole body insertion into the nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of spindle pole body localisation in nuclear envelope","type":"exact"},{"name":"establishment of spindle pole body localization in nuclear envelope","type":"exact"},{"name":"establishment of spindle pole body localization to nuclear envelope","type":"exact"}],"termid":"GO:0140480","terms_by_termid":{"GO:0140480":null}}


id: PBO:0060080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 27","termid":"PBO:0060080"}


id: PBO:0052929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-1","termid":"PBO:0052929"}


id: GO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with oncostatin-M and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"oncostatin-M receptor activity","termid":"GO:0004924"}


id: PBO:0053764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1007","termid":"PBO:0053764"}


id: PBO:0083708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane localized phosphoryltransferase; adds phosphoethanolamine onto the third mannose residue of the glycosylphosphatidylinositol (GPI) anchor precursor; similar to human PIG-O protein","termid":"PBO:0083708"}


id: FYPO:0005113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin-specific protease activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased peptidase activity","termid":"FYPO:0000667"},{"relation_name":"is_a","term_name":"abnormal ubiquitin-specific protease activity","termid":"FYPO:0005111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased ubiquitin-specific protease activity","termid":"FYPO:0005113"}


id: PBO:0111791
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APSES domain","termid":"PBO:0111791"}


id: GO:0120325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a NuRD complex.","definition_xrefs":["GOC:lb","PMID:25150861","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NuRD complex binding","termid":"GO:0120325"}


id: PBO:0052054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 3","termid":"PBO:0052054"}


id: PBO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 1","termid":"PBO:0048394"}


id: PBO:0034586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_tip_during_mitosis","termid":"PBO:0034586"}


id: GO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(1),N(12)-diacetylspermine + O2 = 3-acetamidopropanal + H2O2 + N(1)-acetylspermidine.","definition_xrefs":["RHEA:25868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","secondary_identifiers":["MetaCyc:RXN-10460","EC:1.5.3.13"],"synonyms":[{"name":"N(1)-acetylpolyamine oxidase activity","type":"broad"},{"name":"polyamine oxidase activity","type":"broad"}],"termid":"GO:0052899"}


id: FYPO:0006373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a greater extent than normal.","definition_xrefs":["PMID:29214404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at heterochromatin island during vegetative growth","termid":"FYPO:0003746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0006373"}


id: PBO:0064475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma, catalytic subunit","termid":"PBO:0064475"}


id: GO:1903014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22365144","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to differentiation-inducing factor 1","termid":"GO:1903013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"cellular response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"cellular response to DIF-1","type":"related"},{"name":"cellular response to DIF1","type":"related"}],"termid":"GO:1903014"}


id: GO:2000591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"},{"relation_name":"positively_regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"positive regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000591"}


id: PBO:0047725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 neighbor","termid":"PBO:0047725"}


id: PBO:0110257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC associated protein Ctr1","termid":"PBO:0110257"}


id: GO:0061862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one stimulus.","definition_xrefs":["PMID:19684855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"is_a","term_name":"response to differentiation-inducing factor 2","termid":"GO:1905960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to differentiation-inducing factor 2","synonyms":[{"name":"cellular response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one","type":"exact"},{"name":"cellular response to DIF-2","type":"related"},{"name":"cellular response to DIF2","type":"related"}],"termid":"GO:0061862"}


id: GO:0016833
data:
  {"annotated_genes":["SJAG_01455","SJAG_02225","SJAG_02505","SJAG_04265","SJAG_03775"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106538],"is_not":false,"summary":null,"term":"GO:0016833"},{"annotations":[102194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008696"},{"annotations":[99630,110781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004049"},{"annotations":[109951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102521"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a C-C bond by other means than by hydrolysis or oxidation, of a 3-hydroxy acid.","definition_xrefs":["GOC:jl","EC:4.1.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02225":null,"SJAG_02505":null,"SJAG_03775":null,"SJAG_04265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"oxo-acid-lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxo-acid lyase activity","type":"exact"},{"name":"oxoacid lyase activity","type":"exact"}],"termid":"GO:0016833","terms_by_termid":{"GO:0004049":null,"GO:0008696":null,"GO:0016833":null,"GO:0102521":null}}


id: PBO:0044933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase zeta","termid":"PBO:0044933"}


id: PBO:0048289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 1","termid":"PBO:0048289"}


id: GO:0031593
data:
  {"annotated_genes":["SJAG_00052","SJAG_04384","SJAG_00941","SJAG_02992","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69811,74563,74790,76867],"is_not":false,"summary":null,"term":"GO:0031593"},{"annotations":[76250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination of the target protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00941":null,"SJAG_02992":null,"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polyubiquitin modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031593","terms_by_termid":{"GO:0031593":null,"GO:0036435":null}}


id: GO:0070920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulatory non-coding RNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of regulatory ncRNA processing","synonyms":[{"name":"regulation of gene silencing by RNA, production of guide RNA","type":"exact"},{"name":"regulation of gene silencing by RNA, production of small RNA","type":"exact"},{"name":"regulation of production of small RNA involved in gene silencing by RNA","type":"narrow"}],"termid":"GO:0070920"}


id: GO:1902805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:23527112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle transport","synonyms":[{"name":"activation of synaptic vesicle fission","type":"related"},{"name":"activation of synaptic vesicle fusion","type":"related"},{"name":"activation of synaptic vesicle transport","type":"narrow"},{"name":"positive regulation of synaptic vesicle fission","type":"related"},{"name":"positive regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle fission","type":"related"},{"name":"up regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle transport","type":"exact"},{"name":"up-regulation of synaptic vesicle fission","type":"related"},{"name":"up-regulation of synaptic vesicle fusion","type":"related"},{"name":"up-regulation of synaptic vesicle transport","type":"exact"},{"name":"upregulation of synaptic vesicle fission","type":"related"},{"name":"upregulation of synaptic vesicle fusion","type":"related"},{"name":"upregulation of synaptic vesicle transport","type":"exact"}],"termid":"GO:1902805"}


id: GO:0019016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that consists of one continuous nucleic acid molecule.","definition_xrefs":["GOC:pk"],"gene_count":0,"genotype_count":0,"name":"obsolete non-segmented viral genome (obsolete GO:0019016)","termid":"GO:0019016"}


id: PBO:0062979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 pseudogene 1","termid":"PBO:0062979"}


id: GO:0004748
data:
  {"annotated_genes":["SJAG_02948","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70993],"is_not":false,"summary":null,"term":"GO:0004748"},{"annotations":[103384,88580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["EC:1.17.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity","termid":"GO:0061731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:23252","MetaCyc:RIBONUCLEOSIDE-DIP-REDUCTI-RXN","GO:0016959","Reactome:R-HSA-111751","GO:0016960","GO:0016961","Reactome:R-HSA-111804"],"synonyms":[{"name":"2'-deoxyribonucleoside-diphosphate:oxidized-thioredoxin 2'-oxidoreductase activity","type":"related"},{"name":"2'-deoxyribonucleoside-diphosphate:thioredoxin-disulfide 2'-oxidoreductase activity","type":"related"}],"termid":"GO:0004748","terms_by_termid":{"GO:0004748":null,"GO:0051063":null}}


id: PBO:0083614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynamin-related GTPase involved in mitochondrial organization; required for mitochondrial fission and inheritance; self assembles on the cytoplasmic face of mitochondrial tubules at sites where division will occur; participates in endocytosis and regulates peroxisome fission along with Vps1p; mutants in the human ortholog DNM1L, which mediates mitochondrial fission, peroxisomal division, autophagy, and mitophagy, are associated with slowly progressive infantile encephalopathy","termid":"PBO:0083614"}


id: GO:0061353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the directed movement of a Malpighian tubule cell toward a stimulus, thereby contributing to the shaping of the tubule.","definition_xrefs":["PMID:19783135","GOC:mtg_kidney_jan10","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in Malpighian tubule cell chemotaxis (obsolete GO:0061353)","synonyms":[{"name":"bone morphogenic protein receptor signalling pathway involved in Malpighian tubule cell chemotaxis","type":"exact"}],"termid":"GO:0061353"}


id: PBO:0076842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF2 interacting protein","termid":"PBO:0076842"}


id: PBO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family iron-sulfur cluster protein Dre2 (predicted)","termid":"PBO:0036404"}


id: PBO:0076932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor EC","termid":"PBO:0076932"}


id: PBO:0031457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N-ethylmaleimide","termid":"PBO:0031457"}


id: PBO:0069107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 355, pseudogene","termid":"PBO:0069107"}


id: FYECO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Arginine was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine absent","termid":"FYECO:0000255"}


id: PATO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000293 absolute activity value (obsolete PATO:0000293)","termid":"PATO:0000293"}


id: PBO:0029879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029879"}


id: GO:0072655
data:
  {"annotated_genes":["SJAG_05259","SJAG_02917","SJAG_01780","SJAG_04533","SJAG_00373","SJAG_04208","SJAG_00569","SJAG_07010","SJAG_01004","SJAG_04996","SJAG_01442","SJAG_01684","SJAG_00564","SJAG_03416","SJAG_01560","SJAG_01640","SJAG_03515","SJAG_02077","SJAG_02398","SJAG_01615","SJAG_04218","SJAG_04336","SJAG_00196","SJAG_04432","SJAG_00687","SJAG_01120","SJAG_04014","SJAG_05300","SJAG_01917","SJAG_01405","SJAG_03633","SJAG_03415","SJAG_05302","SJAG_02034","SJAG_01879","SJAG_03560","SJAG_00404","SJAG_02397","SJAG_02809","SJAG_03358","SJAG_03648","SJAG_02361","SJAG_02524","SJAG_01597","SJAG_04641","SJAG_02797","SJAG_03502","SJAG_01949","SJAG_02355","SJAG_01951"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105888,94632,84527],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[85710,106002,84528,102286,95668,95373,95558,101294,113348,103712,87058,90662,93028,96445,107922,103689,111348,99412,112899,98819,103629],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[88925,103690,103713,95559,109322,112389,84849,103413,86561,103630,99054],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[97041,110814,84987,95139,109473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[110815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[94376,103691,106521,86541,94721,106171,107916,106531,87068],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[109315,101697,88448,105315,104197,98336],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[94542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to the mitochondrion or a part of the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to mitochondrion","type":"exact"},{"name":"establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:0072655","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0051204":null}}


id: GO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The fraction of cells, prepared by disruptive biochemical methods, that is enriched for plasma membranes.","definition_xrefs":["PMID:11562363","GOC:mgi_curators","PMID:15601832"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane enriched fraction (obsolete GO:0001950)","synonyms":[{"name":"PME fraction","type":"related"},{"name":"plasma membrane enriched fraction","type":"exact"}],"termid":"GO:0001950"}


id: PR:G2TRJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc4 gene.","definition_xrefs":["UniProtKB:G2TRJ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cx9C motif-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.22","synonyms":[{"name":"Spom972h-cmc4","type":"exact"},{"name":"transcripts altered in meiosis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ8"}


id: GO:0005901
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane raft that forms small pit, depression, or invagination that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Examples include flask-shaped invaginations of the plasma membrane in adipocytes associated with caveolin proteins, and minute pits or incuppings of the cell membrane formed during pinocytosis. Caveolae may be pinched off to form free vesicles within the cytoplasm.","definition_xrefs":["GOC:mah","ISBN:0721662544","PMID:16645198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane raft","termid":"GO:0044853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"caveola","secondary_identifiers":["GO:0016599","Wikipedia:Caveolae"],"synonyms":[{"name":"caveolae","type":"exact"},{"name":"caveolar membrane","type":"related"}],"termid":"GO:0005901"}


id: GO:0050138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + nicotinate = 6-hydroxynicotinate + H+ + NADPH.","definition_xrefs":["EC:1.17.1.5","RHEA:12236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nicotinate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-7637","MetaCyc:NICOTINATE-DEHYDROGENASE-RXN","KEGG_REACTION:R01720"],"synonyms":[{"name":"nicotinate hydroxylase activity","type":"related"},{"name":"nicotinate:NADP+ 6-oxidoreductase (hydroxylating)","type":"related"},{"name":"nicotinic acid hydroxylase activity","type":"related"}],"termid":"GO:0050138"}


id: PBO:0081277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 44","termid":"PBO:0081277"}


id: PBO:0042418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 2","termid":"PBO:0042418"}


id: PBO:0029295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G0_to_G1_transition","termid":"PBO:0029295"}


id: PBO:0067735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 34","termid":"PBO:0067735"}


id: GO:1990475
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that repopulate vacancies within the readily releasable pool (RRP) of synaptic vesicles, and require more significant stimuli than the RRP in order to release neurotransmitter; about 10-15% of the total number of synaptic vesicles at a resting terminal bouton are in this state.","definition_xrefs":["GOC:pad","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle, recycling pool","synonyms":[{"name":"recycling pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990475"}


id: PBO:0029403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_latrunculin_B","termid":"PBO:0029403"}


id: PR:A9ZLL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd90 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A9ZLL8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsd90 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.16c","synonyms":[{"name":"90kDa large and small daughter protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsd90","type":"exact"}],"termid":"PR:A9ZLL8"}


id: PBO:0111819
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQ loop","termid":"PBO:0111819"}


id: PBO:0085825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression suppresses a secretory pathway mutation in E. coli; has similarity to the mammalian RAMP4 protein involved in secretion","termid":"PBO:0085825"}


id: PBO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High Osmolarity Sensitive","termid":"PBO:0001728"}


id: PBO:0078147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 26-1","termid":"PBO:0078147"}


id: PBO:0082232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; specificity for isomaltose, maltose, and palatinose, but not alpha-methylglucoside; most distant member of the IMA isomaltase family, but with similar catalytic properties as Ima1p and Ima2p; not required for isomaltose utilization, but Ima5p overexpression allows the ima1 null mutant to grow on isomaltose; can cleave alpha-1,3 linkage of nigerose and turanose and alpha-1,5 linkage of leucrose and is very sensitive to temperature in vitro","termid":"PBO:0082232"}


id: GO:0102980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-butyl-4-hydroxy-5-methyl-3(2H)-furanone + NADP = (2E)-2-butylidene-4-hydroxy-5-methyl-3(2H)-furanone + NADPH + H+.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-butyl-4-hydroxy-5-methyl-3(2H)-furanoneoxidoreductase activity (obsolete GO:0102980)","termid":"GO:0102980"}


id: PBO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_cellular_hyperosmotic_response","termid":"PBO:0030355"}


id: GO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of TRAIL to its ligand. The complex includes FADD/Mort1 and procaspase-8 addition to the ligand-bound receptor.","definition_xrefs":["PMID:12655293","PMID:12628743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex","synonyms":[{"name":"TRAIL DISC","type":"exact"},{"name":"TRAIL death-inducing signalling complex","type":"exact"}],"termid":"GO:0031266"}


id: PBO:0066106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras protein specific guanine nucleotide releasing factor 1","termid":"PBO:0066106"}


id: GO:0047553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.3","MetaCyc:2-OXOGLUTARATE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-oxoglutarate synthase activity","secondary_identifiers":["RHEA:17297"],"synonyms":[{"name":"2-ketoglutarate ferredoxin oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate ferredoxin oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate:ferredoxin 2-oxidoreductase (CoA-succinylating)","type":"related"},{"name":"2-oxoglutarate:ferredoxin 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"2-oxoglutarate:ferredoxin oxidoreductase activity","type":"related"},{"name":"KGOR activity","type":"related"},{"name":"alpha-ketoglutarate synthase activity","type":"related"},{"name":"alpha-ketoglutarate-ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0047553"}


id: GO:0043410
data:
  {"annotated_genes":["SJAG_06621","SJAG_06622","SJAG_02486","SJAG_00845","SJAG_01199","SJAG_02945","SJAG_02135","SJAG_01587","SJAG_00318","SJAG_06592","SJAG_02183","SJAG_03903","SJAG_03828","SJAG_03453","SJAG_01978","SJAG_00781","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105062,105068,105067,113471,114363,108605,91401,105065,105064,105066,105063,107946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[87010,111699,84338,110742,99834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02486":null,"SJAG_02945":null,"SJAG_03453":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of MAPK cascade","type":"narrow"},{"name":"activation of MAPKKK cascade","type":"narrow"},{"name":"positive regulation of MAP kinase cascade","type":"exact"},{"name":"positive regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"positive regulation of MAPKKK cascade","type":"exact"},{"name":"positive regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"positive regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"positive regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"},{"name":"stimulation of MAPK cascade","type":"exact"},{"name":"stimulation of MAPKKK cascade","type":"narrow"},{"name":"up regulation of MAPKKK cascade","type":"exact"},{"name":"up-regulation of MAPK cascade","type":"exact"},{"name":"up-regulation of MAPKKK cascade","type":"exact"},{"name":"upregulation of MAPK cascade","type":"exact"},{"name":"upregulation of MAPKKK cascade","type":"exact"}],"termid":"GO:0043410","terms_by_termid":{"GO:0062038":null,"GO:1900745":null}}


id: GO:0009881
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0009881","terms_by_termid":{"GO:0009882":null}}


id: GO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential in an atrial cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell membrane repolarization","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"},{"name":"regulation of atrial cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of atrial cardiomyocyte membrane repolarization","type":"exact"}],"termid":"GO:0060372"}


id: PBO:0048524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein overexpressed in skeletal muscle","termid":"PBO:0048524"}


id: GO:0009173
data:
  {"annotated_genes":["SJAG_00694","SJAG_04713","SJAG_04354","SJAG_00533","SJAG_00444","SJAG_00964","SJAG_04709","SJAG_00197","SJAG_03164","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85625,94639,89556,108036,112840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[67042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[84645,89102,111035,83656,88113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009173","terms_by_termid":{"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: PBO:0070746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 2","termid":"PBO:0070746"}


id: PBO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Rbg1 (predicted)","termid":"PBO:0000996"}


id: PBO:0039998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 10","termid":"PBO:0039998"}


id: PBO:0027881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation","termid":"PBO:0027881"}


id: PBO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor B","termid":"PBO:0070396"}


id: GO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A large multisubunit protease found in the cytosol that recognizes, unfolds, and digests protein substrates that have been marked for degradation by the attachment of a ubiquitin group. Individual subcomplexes of the complete 26S proteasome are involved in these different tasks: the ATP-dependent 19S caps are believed to unfold substrates and feed them to the actual protease, the 20S proteasome.","definition_xrefs":["PMID:10410804"],"gene_count":0,"genotype_count":0,"name":"obsolete 26S proteasome (obsolete GO:0005837)","synonyms":[{"name":"26S proteasome","type":"exact"}],"termid":"GO:0005837"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: GO:0060721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of spongiotrophoblast cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"},{"relation_name":"regulates","term_name":"spongiotrophoblast cell proliferation","termid":"GO:0060720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spongiotrophoblast cell proliferation","termid":"GO:0060721"}


id: PBO:0065642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 20C, pseudogene","termid":"PBO:0065642"}


id: PR:G2TRP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mzm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial zinc maintenance protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.21","synonyms":[{"name":"Spom972h-mzm1","type":"exact"}],"termid":"PR:G2TRP8"}


id: PBO:0064788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1H","termid":"PBO:0064788"}


id: GO:0140538
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91301],"is_not":false,"summary":null,"term":"GO:0140538"}]},"cv_name":"biological_process","definition":"A process that prevents a zygote from fusing an additional cell.","definition_xrefs":["PMID:30089908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of conjugation with cellular fusion","termid":"GO:0031138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"negatively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"negative regulation of conjugation with zygote","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140538","terms_by_termid":{"GO:0140538":null}}


id: PBO:0040900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 3","termid":"PBO:0040900"}


id: PBO:0042261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5","termid":"PBO:0042261"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: GO:0036039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the polyphenol, curcumin.","definition_xrefs":["PMID:21467222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"curcumin metabolic process","synonyms":[{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione metabolic process","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione metabolism","type":"exact"},{"name":"curcumin metabolism","type":"exact"},{"name":"diferuloylmethane metabolic process","type":"exact"},{"name":"diferuloylmethane metabolism","type":"exact"},{"name":"turmeric yellow metabolic process","type":"exact"},{"name":"turmeric yellow metabolism","type":"exact"}],"termid":"GO:0036039"}


id: PATO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Overlap with quality inhering in a bearer by virtue of the bearer's being positioned under another entity so as to be covered by some portion of it.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlap with","termid":"PATO:0001590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapped by","termid":"PATO:0002489"}


id: GO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"}


id: PBO:0017509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rcl1 (predicted)","termid":"PBO:0017509"}


id: GO:1904938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Wnt signaling pathway, planar cell polarity pathway that is involved in axon guidance.","definition_xrefs":["PMID:21106844","GOC:bf","GO_REF:0000060","PMID:23517308","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"planar cell polarity pathway involved in axon guidance","synonyms":[{"name":"PCP pathway involved in axon chemotaxis","type":"related"},{"name":"PCP pathway involved in axon growth cone guidance","type":"narrow"},{"name":"PCP pathway involved in axon guidance","type":"exact"},{"name":"PCP pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt-JNK signaling pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt-JNK signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"Wnt-JNK signaling pathway involved in axon guidance","type":"related"},{"name":"Wnt-JNK signaling pathway involved in axon pathfinding","type":"related"},{"name":"Wnt-PCP signaling involved in axon guidance","type":"exact"},{"name":"Wnt-PCP signaling pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt-PCP signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"Wnt-PCP signaling pathway involved in axon guidance","type":"related"},{"name":"Wnt-PCP signaling pathway involved in axon pathfinding","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in axon chemotaxis","type":"related"},{"name":"non-canonical Wnt signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"non-canonical Wnt signaling pathway involved in axon guidance","type":"related"},{"name":"non-canonical Wnt signaling pathway involved in axon pathfinding","type":"related"},{"name":"planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"planar cell polarity pathway involved in axon pathfinding","type":"exact"}],"termid":"GO:1904938"}


id: PBO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0000879"}


id: GO:0006956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation","synonyms":[{"name":"complement activity","type":"related"},{"name":"complement cascade","type":"exact"},{"name":"complement response","type":"exact"}],"termid":"GO:0006956"}


id: PBO:0029380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_stress","termid":"PBO:0029380"}


id: PBO:0026714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026714"}


id: PBO:0080299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 63 pseudogene","termid":"PBO:0080299"}


id: PBO:0059950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 36","termid":"PBO:0059950"}


id: PBO:0028494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_degradation_via_N-end_rule_pathway_during_meiosis","termid":"PBO:0028494"}


id: SO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases attached to a repeating unit made of an acyclic three-carbon propylene glycol connected to a phosphate backbone. It has two enantiomeric forms, (R)-GNA and (S)-GNA.","definition_xrefs":["CHEBI:48015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA","termid":"SO:0001192"}


id: PBO:0001464
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.3.3","termid":"PBO:0001464"}


id: GO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-gamma-glutamyl-L-propargylglycine + O2 = CO2 + L-gamma-glutamyl-(3R)-L-beta-ethynylserine + succinate.","definition_xrefs":["RHEA:59900","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-gamma-glutamyl-L-propargylglycine hydroxylase activity","termid":"GO:0062148"}


id: PBO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.-.-.-","termid":"PBO:0002900"}


id: GO:1903867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an extraembryonic membrane over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0073040584","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraembryonic membrane development","termid":"GO:1903867"}


id: MOD:00299
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-asparagine residue and an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoaspartyl)-L-lysine and the release of ammonia.","definition_xrefs":["DeltaMass:0","PubMed:6503713","PubMed:11000116","RESID:AA0294","ChEBI:21862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"N6-(L-isoaspartyl)-L-lysine","termid":"MOD:01929"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoaspartyl)-L-lysine (Asn)","synonyms":[{"name":"(2S)-2-amino-6-([(3S)-3-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl lysine isopeptide (Lys-Asn)","type":"exact"},{"name":"N(epsilon)-(beta-aspartyl)lysine","type":"exact"},{"name":"N-(beta-Aspartyl)-Lysine (Crosslink)","type":"exact"},{"name":"N6-(L-isoaspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asn)","type":"exact"},{"name":"beta-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"isoaspartyl N6-lysine","type":"exact"}],"termid":"MOD:00299"}


id: GO:0090252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a wing epithelium undergo directed movement and contribute to imaginal disc-derived morphogenesis.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium migration involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090252"}


id: GO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a mast cell.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell mediated immunity","termid":"GO:0002448"}


id: FYPO:0002134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein-RNA interaction","synonyms":[{"name":"decreased RNA binding","type":"exact"},{"name":"decreased RNA-protein interaction","type":"exact"},{"name":"reduced RNA binding","type":"exact"}],"termid":"FYPO:0002134"}


id: PBO:0072018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 5","termid":"PBO:0072018"}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: FYPO:0007319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which stress granule assembly occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:32071154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly","termid":"FYPO:0007318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased stress granule assembly during glucose starvation","synonyms":[{"name":"decreased stress granule assembly during cellular response to glucose starvation","type":"exact"},{"name":"decreased stress granule assembly during glucose depletion","type":"exact"},{"name":"decreased stress granule assembly during glucose deprivation","type":"exact"},{"name":"decreased stress granule assembly during glucose limitation","type":"related"},{"name":"reduced stress granule assembly during glucose starvation","type":"exact"}],"termid":"FYPO:0007319"}


id: PBO:0080996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 32","termid":"PBO:0080996"}


id: PBO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 33","termid":"PBO:0072347"}


id: GO:0050534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxyoctulosonyl-lipopolysaccharide + H2O = 3-deoxyoctulosonic acid + lipopolysaccharide.","definition_xrefs":["EC:3.2.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"3-deoxyoctulosonase activity","secondary_identifiers":["MetaCyc:RXN-12002"],"synonyms":[{"name":"3-deoxyoctulosonyl-lipopolysaccharide hydrolase activity","type":"related"},{"name":"alpha-Kdo-ase activity","type":"related"}],"termid":"GO:0050534"}


id: GO:1990102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing a tetramer of DiaA attached to multiple DnaA molecule bound to oriC DNA. Regulates timely initiation of chromosomal replication during the cell cycle by stimulating assembly of DnaA-oriC complexes, conformational changes in ATP-DnaA initiation complexes, and unwinding of oriC duplex DNA.","definition_xrefs":["GOC:bhm","PMID:17699754","PMID:15326179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DnaA-DiaA complex","synonyms":[{"name":"DnaA-DiaA-DNA complex","type":"exact"}],"termid":"GO:1990102"}


id: SO:1000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000121 sequence_variant_causing_polypeptide_localization_change (obsolete SO:1000121)","synonyms":[{"name":"mutation causing polypeptide localization change","type":"related"},{"name":"sequence variant causing polypeptide localization change","type":"exact"}],"termid":"SO:1000121"}


id: FYPO:0001493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, and contains more than one nucleus apiece.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated multinucleate vegetative cell","synonyms":[{"name":"SIN phenotype","type":"related"},{"name":"elongated inviable multinucleate cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multinucleate vegetative cell","type":"exact"}],"termid":"FYPO:0001493"}


id: PBO:0059677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 43","termid":"PBO:0059677"}


id: GO:0080110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sporopollenin, a primary constituent of the pollen exine layer.","definition_xrefs":["PMID:19218397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"part_of","term_name":"pollen exine formation","termid":"GO:0010584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"sporopollenin biosynthetic process","synonyms":[{"name":"sporopollenin biosynthesis","type":"exact"}],"termid":"GO:0080110"}


id: PBO:0085938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mtc2 is synthetically sick with cdc13-1","termid":"PBO:0085938"}


id: GO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.","definition_xrefs":["ISBN:068340007X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver development","termid":"GO:0001889"}


id: PBO:0080375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog B","termid":"PBO:0080375"}


id: PBO:0041882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 1","termid":"PBO:0041882"}


id: GO:1902382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 11-oxo-beta-amyrin.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid catabolic process","termid":"GO:0019741"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"11-oxo-beta-amyrin metabolic process","termid":"GO:1902381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"11-oxo-beta-amyrin catabolic process","synonyms":[{"name":"11-oxo-beta-amyrin breakdown","type":"exact"},{"name":"11-oxo-beta-amyrin catabolism","type":"exact"},{"name":"11-oxo-beta-amyrin degradation","type":"exact"}],"termid":"GO:1902382"}


id: PBO:0003195
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.5","termid":"PBO:0003195"}


id: PBO:0044115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 1B","termid":"PBO:0044115"}


id: GO:2000971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of detection of glucose","termid":"GO:2000970"},{"relation_name":"negatively_regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of glucose","synonyms":[{"name":"negative regulation of glucose detection","type":"exact"},{"name":"negative regulation of glucose perception","type":"related"},{"name":"negative regulation of glucose sensing","type":"related"}],"termid":"GO:2000971"}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: PBO:0091239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zn(2)-C6 fungal-type, truncated","termid":"PBO:0091239"}


id: GO:0102351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-aminobutyric acid + 2-oxo monocarboxylic acid anion = 4-oxobutanoate + glycine.","definition_xrefs":["EC:2.6.1.96","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"gamma-aminobutyrate transaminase (glyoxylate dependent) activity","secondary_identifiers":["RHEA:32267","MetaCyc:RXN-13328"],"termid":"GO:0102351"}


id: PBO:0055173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2597","termid":"PBO:0055173"}


id: GO:0071969
data:
  {"annotated_genes":["SJAG_02222","SJAG_04483","SJAG_00218","SJAG_00876","SJAG_04771","SJAG_01288","SJAG_03587","SJAG_05285","SJAG_04666","SJAG_01290","SJAG_01835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[103899,111937,105427,109289,87738,102213,87728,84264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[83708,88560],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of fungi.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0071969","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: GO:0140037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor that recognizes and binds a target protein containing a SUMO modification and that brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0030674","GO:0005515","GO:0060090"],"is_obsolete":false,"name":"SUMO-modified protein reader activity","synonyms":[{"name":"SUMO-dependent protein binding","type":"exact"}],"termid":"GO:0140037"}


id: PBO:0069304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 560, pseudogene","termid":"PBO:0069304"}


id: PBO:0040457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting non-gastric alpha2 subunit","termid":"PBO:0040457"}


id: PBO:0012300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex subunit Ufd1 (predicted)","termid":"PBO:0012300"}


id: PBO:0075625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 2","termid":"PBO:0075625"}


id: PBO:0005794
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis","termid":"PBO:0005794"}


id: PBO:0067226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 296, pseudogene","termid":"PBO:0067226"}


id: GO:0010996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auditory stimulus.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to auditory stimulus","synonyms":[{"name":"response to sound","type":"exact"},{"name":"response to sound stimulus","type":"exact"}],"termid":"GO:0010996"}


id: GO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate, where the triacylglycerol is part of a lipoprotein.","definition_xrefs":["GOC:bf","EC:3.1.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride lipase activity","termid":"GO:0004806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"lipoprotein lipase activity","secondary_identifiers":["Reactome:R-HSA-8979996","Reactome:R-HSA-2395768","Reactome:R-HSA-8980228","Reactome:R-HSA-174757","Reactome:R-HSA-6789310","Reactome:R-HSA-1482811"],"synonyms":[{"name":"clearing factor lipase activity","type":"related"},{"name":"diacylglycerol hydrolase activity","type":"related"},{"name":"diacylglycerol lipase activity","type":"related"},{"name":"diglyceride lipase activity","type":"related"},{"name":"lipemia-clearing factor","type":"related"},{"name":"postheparin esterase activity","type":"related"},{"name":"postheparin lipase activity","type":"related"},{"name":"triacylglycero-protein acylhydrolase activity","type":"related"}],"termid":"GO:0004465"}


id: FYPO:0003307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is higher than normal. The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PMID:11683392","PMID:22684255","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased mitotic index","termid":"FYPO:0003307"}


id: PBO:0047093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member E","termid":"PBO:0047093"}


id: GO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes whereby a uridine residue in a tRNA is converted to 4-thiouridine. Typically 4-thiouridine is found at position 8, in many transfer RNAs.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA 4-thiouridine biosynthesis","termid":"GO:0002937"}


id: PBO:0064365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMIS2 transmembrane protein","termid":"PBO:0064365"}


id: FYPO:0000637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth rate on glucose carbon source","synonyms":[{"name":"enhanced growth on glucose","type":"related"},{"name":"fast cell population growth on glucose carbon source","type":"exact"},{"name":"increased cell population proliferation on glucose carbon source","type":"related"},{"name":"increased cell proliferation on glucose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on glucose carbon source","type":"exact"}],"termid":"FYPO:0000637"}


id: GO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycobiliviolin to phycoerythrocyanin.","definition_xrefs":["RESID:AA0258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycobiliviolin linkage","termid":"GO:0017008"}


id: GO:0038191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the neuropilin family.","definition_xrefs":["GOC:bf","PMID:23871893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neuropilin binding","synonyms":[{"name":"Nrp binding","type":"exact"},{"name":"Nrp ligand","type":"narrow"},{"name":"neuropilin-binding","type":"exact"}],"termid":"GO:0038191"}


id: FYPO:0006316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more spindle pole bodies (SPBs) than normal during the second meiotic nuclear division.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole bodies present in increased numbers during meiosis","termid":"FYPO:0004609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during meiosis II","synonyms":[{"name":"SPBs present in increased numbers during meiosis II","type":"exact"},{"name":"excess meiotic spindle pole bodies present during meiosis II","type":"exact"},{"name":"excess spindle pole bodies present during meiosis II","type":"exact"},{"name":"extra spindle pole bodies present during meiosis II","type":"exact"},{"name":"spindle pole bodies present in greater numbers during meiosis II","type":"exact"},{"name":"spindle pole bodies present in increased numbers during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006316"}


id: PBO:0062561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AA member 1 pseudogene","termid":"PBO:0062561"}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: PATO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality that is the mixture, purity or pattern of wavelengths of light perceived by the observer.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatic property","termid":"PATO:0001301"}


id: PBO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tacrolimus_during_salt_stress","termid":"PBO:0030456"}


id: FYPO:0002610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal at centromeric outer repeat regions. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H2A phosphorylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H2A phosphorylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H2A phosphorylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H2A phosphorylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H2A phosphorylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H2A phosphorylation at centromere outer repeat during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002610"}


id: GO:0080111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["PMID:17208187"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA demethylation (obsolete GO:0080111)","termid":"GO:0080111"}


id: PBO:0026895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026895"}


id: PBO:0059775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 1","termid":"PBO:0059775"}


id: PBO:0082097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"73 kDa subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; relocates to the cytosol under hypoxic conditions; deletion mutants are temperature-sensitive; SNF12 has a paralog, RSC6, that arose from the whole genome duplication","termid":"PBO:0082097"}


id: PBO:0073126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC13 homolog, nuclear pore and COPII coat complex component","termid":"PBO:0073126"}


id: GO:0046862
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a chromoplast and form the chromoplast envelope.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"chromoplast envelope","termid":"GO:0031898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast membrane","termid":"GO:0046862"}


id: PBO:0034678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034678"}


id: PBO:0047663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 15","termid":"PBO:0047663"}


id: PBO:0031464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bismuth","termid":"PBO:0031464"}


id: GO:0018177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of phospho-uridine to a protein amino acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein uridylylation","synonyms":[{"name":"protein amino acid uridylylation","type":"exact"}],"termid":"GO:0018177"}


id: PBO:0055529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2964","termid":"PBO:0055529"}


id: FYPO:0005477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005477"}


id: PR:O43007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade9 gene.","definition_xrefs":["UniProtKB:O43007","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.08","synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade9","type":"exact"}],"termid":"PR:O43007"}


id: PBO:0079620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L5","termid":"PBO:0079620"}


id: PBO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7","termid":"PBO:0046845"}


id: GO:0016857
data:
  {"annotated_genes":["SJAG_02951","SJAG_01784","SJAG_03818","SJAG_00501"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109849,109848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004034"},{"annotations":[92506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004750"},{"annotations":[109853,109852,105722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003978"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00501":null,"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on carbohydrates and derivatives","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.1.3.-","Reactome:R-HSA-6787677"],"termid":"GO:0016857","terms_by_termid":{"GO:0003978":null,"GO:0004034":null,"GO:0004750":null}}


id: FYPO:0005989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during conjugation with cellular fusion. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization during mating","synonyms":[{"name":"abnormal cellular protein localisation during mating","type":"exact"},{"name":"abnormal cellular protein localization during mating","type":"exact"},{"name":"abnormal protein localisation during mating","type":"exact"},{"name":"abnormal protein localization during conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0005989"}


id: PBO:0039175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 7","termid":"PBO:0039175"}


id: GO:0140793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX tyrosine phosphate (position 142) + H2O = histone H2AX tyrosine (position 142) + phosphate.","definition_xrefs":["PMID:19351884","PMID:19234442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone phosphatase activity","termid":"GO:0140789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0004721","GO:0016788","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"histone H2AXY142 phosphatase activity","synonyms":[{"name":"histone H2-Y142 phosphatase activity","type":"exact"},{"name":"histone H2Y142 phosphatase activity","type":"related"},{"name":"histone tyrosine phosphatase activity (H2-Y142 specific)","type":"exact"}],"termid":"GO:0140793"}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0003674","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: PBO:0083662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) membrane protein; involved in the translocation of soluble secretory proteins and insertion of membrane proteins into the ER membrane; may also have a role in the stress response but has only partial functional overlap with WSC1-3","termid":"PBO:0083662"}


id: PR:P40380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rum1 gene.","definition_xrefs":["UniProtKB:P40380","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase inhibitor rum1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.09","synonyms":[{"name":"Spom972h-rum1","type":"exact"},{"name":"p25-rum1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40380"}


id: GO:0006742
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101222],"is_not":false,"summary":null,"term":"GO:0006742"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"NADP metabolic process","termid":"GO:0006739"},{"relation_name":"is_a","term_name":"pyridine nucleotide catabolic process","termid":"GO:0019364"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"NADP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NADP (oxidized) catabolic process","type":"exact"},{"name":"NADP (oxidized) catabolism","type":"exact"},{"name":"NADP (reduced) catabolic process","type":"exact"},{"name":"NADP (reduced) catabolism","type":"exact"},{"name":"NADP breakdown","type":"exact"},{"name":"NADP catabolism","type":"exact"},{"name":"NADP degradation","type":"exact"},{"name":"NADPH catabolic process","type":"exact"},{"name":"NADPH catabolism","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"},{"name":"oxidized NADP catabolic process","type":"exact"},{"name":"oxidized NADP catabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"},{"name":"reduced NADP catabolic process","type":"exact"},{"name":"reduced NADP catabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"}],"termid":"GO:0006742","terms_by_termid":{"GO:0006742":null}}


id: PR:Q9P7I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.02c gene.","definition_xrefs":["UniProtKB:Q9P7I0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat-containing protein C105.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.02c","synonyms":[{"name":"Spom972h-SPAC105.02c","type":"exact"}],"termid":"PR:Q9P7I0"}


id: PBO:0081458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 324B","termid":"PBO:0081458"}


id: PBO:0065612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 6","termid":"PBO:0065612"}


id: GO:1900383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.","definition_xrefs":["GOC:TermGenie","PMID:22464329","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic plasticity by receptor localization to synapse","synonyms":[{"name":"regulation of synaptic plasticity by receptor localisation to synapse","type":"exact"}],"termid":"GO:1900383"}


id: PBO:0061700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0061700"}


id: PBO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated C terminal region of membrane transporter","termid":"PBO:0000087"}


id: GO:0120307
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extended membranous thread which firmly connects the plasma membrane to the cell wall during plasmolysis such that the plasma membrane does not separate from the cell wall completely.","definition_xrefs":["PMID:32397402","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Hechtian strand","secondary_identifiers":["Wikipedia:Hechtian_strand"],"termid":"GO:0120307"}


id: SO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region that is bounded either side by a particular kind of region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanked","termid":"SO:0000357"}


id: MOD:01724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01724"}


id: GO:0034972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 26 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R26 methylation (obsolete GO:0034972)","synonyms":[{"name":"histone H3 R26 methylation","type":"exact"},{"name":"histone H3R26me","type":"exact"},{"name":"histone lysine H3 R26 methylation","type":"exact"}],"termid":"GO:0034972"}


id: PBO:0049510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 17","termid":"PBO:0049510"}


id: GO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type I interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-1, type I receptor binding","synonyms":[{"name":"IL-1 type I","type":"narrow"},{"name":"interleukin-1, type I receptor ligand","type":"narrow"}],"termid":"GO:0005150"}


id: FYPO:0001330
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115390,115388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115391,115389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004695"},{"annotations":[115364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002227"},{"annotations":[115376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115446,115447,115448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"},{"annotations":[115375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased level of substance in cell during vegetative growth","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_00426","SJAG_03689","SJAG_03575"],"single_locus_genotype_uniquenames":["dcr1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased accumulation of substance in cell during vegetative growth","type":"related"},{"name":"increased level of substance in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001330","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0002227":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004982":null}}


id: PBO:0064671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 6","termid":"PBO:0064671"}


id: GO:0032184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polymer of the small ubiquitin-like protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO binding","termid":"GO:0032183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SUMO polymer binding","synonyms":[{"name":"Smt3 polymer binding","type":"exact"}],"termid":"GO:0032184"}


id: PBO:0075145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 1","termid":"PBO:0075145"}


id: FYPO:0002758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 4-nitroquinoline N-oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to 4-nitroquinoline N-oxide","synonyms":[{"name":"resistance to 4-NQO","type":"exact"},{"name":"resistance to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"resistance to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"resistance to 4NQO","type":"exact"},{"name":"resistant to 4-nitroquinoline N-oxide","type":"exact"}],"termid":"FYPO:0002758"}


id: PBO:0013462
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses rad3delta or rad3-36 sensitivity to UV and hydroxyurea","termid":"PBO:0013462"}


id: GO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential depolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential depolarization","type":"narrow"}],"termid":"GO:0086041"}


id: PBO:0062789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 3","termid":"PBO:0062789"}


id: GO:0007269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"signal release from synapse","termid":"GO:0099643"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter secretion","secondary_identifiers":["GO:0010554"],"synonyms":[{"name":"neurotransmitter release","type":"exact"},{"name":"neurotransmitter secretory pathway","type":"exact"}],"termid":"GO:0007269"}


id: FYPO:0003040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA splicing is decreased. All RNA splicing may be increased, or splicing of one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA splicing","synonyms":[{"name":"decreased RNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing during vegetative growth","type":"exact"},{"name":"decreased RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced RNA splicing","type":"exact"}],"termid":"FYPO:0003040"}


id: PBO:0082081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribose-1-phosphate isomerase; catalyzes the isomerization of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate in the methionine salvage pathway","termid":"PBO:0082081"}


id: PBO:0000178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3a","termid":"PBO:0000178"}


id: GO:0045667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoblast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoblast differentiation","termid":"GO:0045667"}


id: GO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"negatively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"negative regulation of strand invasion","synonyms":[{"name":"negative regulation of D-loop biosynthesis","type":"related"},{"name":"negative regulation of D-loop formation","type":"related"},{"name":"negative regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0060543"}


id: PBO:0057318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518e","termid":"PBO:0057318"}


id: FYPO:0007684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from early meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased level of early meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of early meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of early meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of early meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of early meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0007684"}


id: GO:1902982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA strand elongation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"DNA strand elongation involved in premeiotic DNA replication","synonyms":[{"name":"DNA strand elongation involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902982"}


id: GO:1901810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-carotene.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00802","MetaCyc:PWY-5943","PMID:11387982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene metabolic process","synonyms":[{"name":"beta-carotene metabolism","type":"exact"}],"termid":"GO:1901810"}


id: GO:0106437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction: ATP + L-glutamate + L-glutamyl-[protein] = ADP + H+ + L-gamma-glutamyl-L-glutamyl-[protein] + phosphate.","definition_xrefs":["Rhea:60144","PMID:32747782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, initiating","termid":"GO:0106437"}


id: SO:1001280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located upstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_recoding_site","synonyms":[{"name":"five prime recoding site","type":"exact"}],"termid":"SO:1001280"}


id: PBO:0062882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian adenocarcinoma amplified long non-coding RNA","termid":"PBO:0062882"}


id: PBO:0111857
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor","termid":"PBO:0111857"}


id: GO:0015295
data:
  {"annotated_genes":["SJAG_03608","SJAG_03595","SJAG_04673","SJAG_02780","SJAG_02958","SJAG_04068","SJAG_03606","SJAG_03960","SJAG_00057","SJAG_04905","SJAG_04506","SJAG_03820","SJAG_01406","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88202,88208],"is_not":false,"summary":null,"term":"GO:0015295"},{"annotations":[106776,75268,99112,72191,110291,110298,113308,88630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[113312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[94192,88710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[97789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(out) = solute(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"solute:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"},{"name":"heavy metal ion:hydrogen symporter activity","type":"narrow"},{"name":"high affinity metal ion uptake transporter activity","type":"narrow"},{"name":"low affinity metal ion uptake transporter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"},{"name":"solute:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015295","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0034216":null,"GO:0097434":null}}


id: PBO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt5 (predicted)","termid":"PBO:0002056"}


id: GO:1901124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bacitracin A.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"bacitracin A metabolic process","termid":"GO:1901122"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A biosynthetic process","synonyms":[{"name":"bacitracin A anabolism","type":"exact"},{"name":"bacitracin A biosynthesis","type":"exact"},{"name":"bacitracin A formation","type":"exact"},{"name":"bacitracin A synthesis","type":"exact"}],"termid":"GO:1901124"}


id: PBO:0047219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 225 member A","termid":"PBO:0047219"}


id: PBO:0086680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP and mCherry fusion proteins localize to the nucleus and endoplasmic reticulum respectively; YHR214C-D has a paralog, YAR069C, that arose from a segmental duplication","termid":"PBO:0086680"}


id: GO:0003682
data:
  {"annotated_genes":["SJAG_03387","SJAG_04210","SJAG_00641","SJAG_02990","SJAG_01745","SJAG_03832","SJAG_03945","SJAG_02773","SJAG_00170","SJAG_04586","SJAG_00164","SJAG_00863","SJAG_00728","SJAG_04917","SJAG_03460","SJAG_03354","SJAG_03905","SJAG_00327","SJAG_02563","SJAG_00861","SJAG_02416","SJAG_02401","SJAG_00783","SJAG_03635","SJAG_00440","SJAG_00698","SJAG_01046","SJAG_01067","SJAG_00481","SJAG_01010","SJAG_03787","SJAG_04879","SJAG_03689","SJAG_00471","SJAG_02348","SJAG_01146","SJAG_03418","SJAG_04038","SJAG_00796","SJAG_02314","SJAG_05333","SJAG_01653","SJAG_01827","SJAG_03694","SJAG_03982","SJAG_04205","SJAG_00618","SJAG_03441","SJAG_04183","SJAG_00584","SJAG_03926","SJAG_02815","SJAG_00925","SJAG_00585","SJAG_03927","SJAG_04407","SJAG_03449","SJAG_01610","SJAG_00768","SJAG_03698","SJAG_03997","SJAG_02165","SJAG_05192","SJAG_04512","SJAG_00913","SJAG_03128","SJAG_00914","SJAG_02698","SJAG_01878","SJAG_00942","SJAG_00311","SJAG_05239","SJAG_01823","SJAG_01938","SJAG_03944","SJAG_04670","SJAG_00935"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85259,85291,85305,85761,86244,86611,86807,86923,87086,87498,88743,90113,90760,92386,92943,93531,93578,95098,95283,97200,97627,100292,101129,102929,103104,103947,103961,104226,104272,105792,106736,107876,108563,109009,109184,109512,110244,111402,111710,111773,112410,112650,112986,113021,113173],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[103118,107246,110520,91679,106073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031490"},{"annotations":[95708,105258,111479,103042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043035"},{"annotations":[112113,101494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990188"},{"annotations":[106352,99697,88524,109736,106074,113131,93238,104002,107396,90229,104901,99039,104906,109426,111523,92304,113228,113371,99362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031491"},{"annotations":[108007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"},{"annotations":[87565,103018,90230,99363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990841"}]},"cv_name":"molecular_function","definition":"Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["ISBN:0198506732","GOC:jl","PMID:20404130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00164":null,"SJAG_00170":null,"SJAG_00311":null,"SJAG_00327":null,"SJAG_00440":null,"SJAG_00471":null,"SJAG_00481":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00618":null,"SJAG_00641":null,"SJAG_00698":null,"SJAG_00728":null,"SJAG_00768":null,"SJAG_00783":null,"SJAG_00796":null,"SJAG_00861":null,"SJAG_00863":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00935":null,"SJAG_00942":null,"SJAG_01010":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01146":null,"SJAG_01610":null,"SJAG_01653":null,"SJAG_01745":null,"SJAG_01823":null,"SJAG_01827":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02165":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_02563":null,"SJAG_02698":null,"SJAG_02773":null,"SJAG_02815":null,"SJAG_02990":null,"SJAG_03128":null,"SJAG_03354":null,"SJAG_03387":null,"SJAG_03418":null,"SJAG_03441":null,"SJAG_03449":null,"SJAG_03460":null,"SJAG_03635":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03698":null,"SJAG_03787":null,"SJAG_03832":null,"SJAG_03905":null,"SJAG_03926":null,"SJAG_03927":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04038":null,"SJAG_04183":null,"SJAG_04205":null,"SJAG_04210":null,"SJAG_04407":null,"SJAG_04512":null,"SJAG_04586":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_04917":null,"SJAG_05192":null,"SJAG_05239":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lamin/chromatin binding","type":"narrow"},{"name":"microtubule/chromatin interaction","type":"narrow"},{"name":"nuclear membrane vesicle binding to chromatin","type":"narrow"}],"termid":"GO:0003682","terms_by_termid":{"GO:0003682":null,"GO:0031490":null,"GO:0031491":null,"GO:0043035":null,"GO:0140585":null,"GO:1990188":null,"GO:1990841":null}}


id: GO:0061616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic process through fructose-6-phosphate in which fructose is catabolized into pyruvate.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0055086","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glycolytic process from fructose through fructose-6-phosphate","secondary_identifiers":["MetaCyc:PWY-5484"],"synonyms":[{"name":"glycolysis from fructose through fructose-6-phosphate","type":"exact"}],"termid":"GO:0061616"}


id: PBO:0080965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7B","termid":"PBO:0080965"}


id: GO:0075288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of sporangiospore formation","termid":"GO:0075286"},{"relation_name":"negatively_regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangiospore formation","termid":"GO:0075288"}


id: PBO:0050404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 6","termid":"PBO:0050404"}


id: FYPO:0003109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere during vegetative growth","termid":"FYPO:0003108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to telomere during vegetative growth","synonyms":[{"name":"abolished protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abolished protein localisation to telomere during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abolished protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"protein absent from telomere during vegetative growth","type":"related"},{"name":"protein localization to telomere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003109"}


id: PBO:0072059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 29","termid":"PBO:0072059"}


id: PATO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being non-essential or dispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity (continuant)","termid":"PATO:0001634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnecessary (continuant)","termid":"PATO:0001636"}


id: GO:0141144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont damages or impairs host neutrophil extracellular traps. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21231972","PMID:25605868","PMID:16488875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host neutrophil extracellular traps","synonyms":[{"name":"symbiont-mediated perturbation of host neutrophil extracellular traps","type":"exact"}],"termid":"GO:0141144"}


id: PBO:0039996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 2","termid":"PBO:0039996"}


id: GO:1904181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization","synonyms":[{"name":"activation of membrane depolarization","type":"narrow"},{"name":"up regulation of membrane depolarization","type":"exact"},{"name":"up-regulation of membrane depolarization","type":"exact"},{"name":"upregulation of membrane depolarization","type":"exact"}],"termid":"GO:1904181"}


id: GO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming second","secondary_identifiers":["GO:0010003","GO:0048276"],"synonyms":[{"name":"deuterostomic gastrulation","type":"exact"}],"termid":"GO:0001702"}


id: FYECO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which diuron was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ diuron","synonyms":[{"name":"+ 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"+ DCMU","type":"exact"},{"name":"+ respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000379"}


id: GO:0035342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of inosine transport","termid":"GO:0035341"},{"relation_name":"positively_regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inosine transport","synonyms":[{"name":"positive regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035342"}


id: GO:1902899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fatty acid methyl ester.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:16570218","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"fatty acid methyl ester metabolic process","termid":"GO:1902898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid methyl ester biosynthetic process","synonyms":[{"name":"FAME biosynthetic process","type":"exact"},{"name":"fatty acid methyl ester anabolism","type":"exact"},{"name":"fatty acid methyl ester biosynthesis","type":"exact"},{"name":"fatty acid methyl ester formation","type":"exact"},{"name":"fatty acid methyl ester synthesis","type":"exact"}],"termid":"GO:1902899"}


id: GO:0042201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-cyclopropylmelamine, a triazine compound commonly used as an insect growth regulator insecticide.","definition_xrefs":["UM-BBD_pathwayID:cpm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-cyclopropylmelamine metabolic process","synonyms":[{"name":"N-cyclopropylmelamine metabolism","type":"exact"},{"name":"cyromazine metabolic process","type":"exact"},{"name":"cyromazine metabolism","type":"exact"}],"termid":"GO:0042201"}


id: PBO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit (predicted)","termid":"PBO:0005230"}


id: PBO:0011469
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this is not NADH complex associated in yeast (which do not have the other 40 subunits that are present in that complex in mammals), possibly involved in iron sulpher protein assembly or lipid metabolism, see associated refs for more info on the human protein","termid":"PBO:0011469"}


id: GO:0016191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the protein coat on a synaptic vesicle following the pinching step at the end of budding from the presynaptic membrane.","definition_xrefs":["PMID:24596248","GOC:curators","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat disassembly","termid":"GO:0072318"},{"relation_name":"part_of","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle uncoating","synonyms":[{"name":"synaptic vesicle coat depolymerization","type":"exact"},{"name":"synaptic vesicle coat protein depolymerization","type":"exact"}],"termid":"GO:0016191"}


id: GO:0042128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances.","definition_xrefs":["GOC:das","GOC:mah","PMID:10542156","PMID:8122899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate metabolic process","termid":"GO:0042126"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0071941"],"is_obsolete":false,"name":"nitrate assimilation","secondary_identifiers":["MetaCyc:PWY-381"],"synonyms":[{"name":"assimilatory nitrate reduction","type":"exact"}],"termid":"GO:0042128"}


id: PBO:0089475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, unknown specificity, implicated in sulfur compound metabolism","termid":"PBO:0089475"}


id: GO:1904802
data:
  {"annotated_genes":["SJAG_00087"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110427],"is_not":false,"summary":null,"term":"GO:1904802"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a RITS complex.","definition_xrefs":["PMID:26443059","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"RITS complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RITS complex formation","type":"exact"}],"termid":"GO:1904802","terms_by_termid":{"GO:1904802":null}}


id: SO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases the level of mature, spliced and processed RNA with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"level_of_transcript_variant","termid":"SO:0001540"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcript_level_variant","synonyms":[{"name":"increased transcript level variant","type":"exact"}],"termid":"SO:0001542"}


id: GO:1903119
data:
  {"annotated_genes":["SJAG_00279","SJAG_04703","SJAG_02228","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[88467,106925,114728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the location of an actin cytoskeleton.","definition_xrefs":["PMID:24798735","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02228":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in actin cytoskeleton","type":"exact"},{"name":"protein localisation to actin cytoskeleton","type":"exact"},{"name":"protein localization in actin cytoskeleton","type":"exact"}],"termid":"GO:1903119","terms_by_termid":{"GO:0044379":null,"GO:1904498":null}}


id: PBO:0028800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028800"}


id: PBO:0041691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin receptor","termid":"PBO:0041691"}


id: GO:0015914
data:
  {"annotated_genes":["SJAG_03050","SJAG_03710","SJAG_01305","SJAG_00018","SJAG_03416","SJAG_00587","SJAG_03721","SJAG_03338","SJAG_01225","SJAG_00576","SJAG_02516","SJAG_03746","SJAG_05209","SJAG_02957","SJAG_01116","SJAG_02132","SJAG_00230","SJAG_01731","SJAG_03172","SJAG_01945","SJAG_01095","SJAG_02943","SJAG_00589","SJAG_03851","SJAG_04370","SJAG_16459","SJAG_05268","SJAG_00669","SJAG_01229","SJAG_06440","SJAG_03741","SJAG_02114","SJAG_02581","SJAG_01470","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60631,64479,93694,103144],"is_not":false,"summary":null,"term":"GO:0015914"},{"annotations":[67875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[93693,96649,85403,103771,93632,94769,102852,104772,97406,100171,112366,103642,87065,101954,105651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[105637,94072,86689,95601,86681,86682,86684,86687,98467,108617,97408,101188,96317,86683,86686,90569,86688,98344,86685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[92766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01116":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phospholipid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015914","terms_by_termid":{"GO:0015914":null,"GO:0017121":null,"GO:0045332":null,"GO:0120010":null,"GO:0140331":null}}


id: GO:0140041
data:
  {"annotated_genes":["SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101151],"is_not":false,"summary":null,"term":"GO:0140041"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of methylglyoxal. These may include chemical modification or transport of methylglyoxal away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["PMID:15042280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification of aldehyde","termid":"GO:0110095"},{"relation_name":"part_of","term_name":"cellular response to methylglyoxal","termid":"GO:0097238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of methylglyoxal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140041","terms_by_termid":{"GO:0140041":null}}


id: GO:0120030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency of cilium beating involved in ciliary motility.","definition_xrefs":["PMID:28035044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium beat frequency involved in ciliary motility","termid":"GO:0060296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium beat frequency involved in ciliary motility","termid":"GO:0120030"}


id: PBO:0039968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 3","termid":"PBO:0039968"}


id: GO:0047118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dioxo-6-phenylhexanoate + NADP+ = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.40","RHEA:24268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate reductase activity","secondary_identifiers":["MetaCyc:1.3.1.40-RXN","KEGG_REACTION:R03463"],"synonyms":[{"name":"2,6-dioxo-6-phenylhexanoate:NADP+ delta2-oxidoreductase activity","type":"related"},{"name":"2-hydroxy-6-oxo-phenylhexa-2,4-dienoate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"}],"termid":"GO:0047118"}


id: PBO:0040177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate dehydrogenase domain containing","termid":"PBO:0040177"}


id: GO:0030239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of myofibrils, the repeating units of striated muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"striated muscle cell development","termid":"GO:0055002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"myofibril assembly","termid":"GO:0030239"}


id: GO:0099565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of synaptic transmission occurring in the post-synapse: a signal transduction pathway consisting of neurotransmitter receptor activation and its effects on postsynaptic membrane potential and the ionic composition of the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemical synaptic transmission, postsynaptic","synonyms":[{"name":"postsynaptic process involved in chemical synaptic transmission","type":"exact"}],"termid":"GO:0099565"}


id: GO:0036496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the dephosphorylation of eIF2 alpha.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"},{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha dephosphorylation","termid":"GO:0036496"}


id: PR:Q9UT92
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC323.07c gene.","definition_xrefs":["UniProtKB:Q9UT92","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C323.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.07c","synonyms":[{"name":"Spom972h-SPAC323.07c","type":"exact"}],"termid":"PR:Q9UT92"}


id: PBO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_raffinose","termid":"PBO:0030410"}


id: GO:0042060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["PMID:15269788","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing","secondary_identifiers":["Wikipedia:Wound_healing"],"termid":"GO:0042060"}


id: PBO:0040284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 4","termid":"PBO:0040284"}


id: PBO:0011470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Klf1","termid":"PBO:0011470"}


id: GO:0019351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dethiobiotin, a derivative of biotin in which the sulfur atom has been replaced by two hydrogen atoms.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dethiobiotin metabolic process","termid":"GO:0046450"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dethiobiotin biosynthetic process","synonyms":[{"name":"desthiobiotin biosynthesis","type":"exact"},{"name":"desthiobiotin biosynthetic process","type":"exact"},{"name":"dethiobiotin anabolism","type":"exact"},{"name":"dethiobiotin biosynthesis","type":"exact"},{"name":"dethiobiotin formation","type":"exact"},{"name":"dethiobiotin synthesis","type":"exact"}],"termid":"GO:0019351"}


id: GO:0004160
data:
  {"annotated_genes":["SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86854],"is_not":false,"summary":null,"term":"GO:0004160"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H2O.","definition_xrefs":["EC:4.2.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"dihydroxy-acid dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:20936","MetaCyc:DIHYDROXYISOVALDEHYDRAT-RXN"],"synonyms":[{"name":"2,3-dihydroxy-acid hydro-lyase (3-methyl-2-oxobutanoate-forming)","type":"related"},{"name":"2,3-dihydroxy-acid hydro-lyase activity","type":"related"},{"name":"2,3-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"DHAD","type":"related"},{"name":"acetohydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"dihydroxy acid dehydrase activity","type":"related"}],"termid":"GO:0004160","terms_by_termid":{"GO:0004160":null}}


id: GO:1903831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any signal transduction that is involved in cellular response to ammonium ion.","definition_xrefs":["PMID:16297994","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to ammonium ion","termid":"GO:0071242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction involved in cellular response to ammonium ion","synonyms":[{"name":"signaling cascade involved in cellular response to ammonium ion","type":"narrow"},{"name":"signaling pathway involved in cellular response to ammonium ion","type":"related"},{"name":"signalling cascade involved in cellular response to ammonium ion","type":"narrow"},{"name":"signalling pathway involved in cellular response to ammonium ion","type":"related"}],"termid":"GO:1903831"}


id: GO:0097418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular mass of paired, helically wound protein filaments (also called PHF) lying in the cytoplasm of neuronal cell bodies and neuritic cell processes. Neurofibrillary tangles contain an abnormally phosphorylated form of a microtubule-associated protein, tau. The shape of these inclusions may resemble a flame or a star.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090202","NIF_Subcellular:sao2409833926","NIF_Subcellular:nlx_subcell_20090201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neurofibrillary tangle","synonyms":[{"name":"flame-shaped neurofibrillary tangle","type":"narrow"},{"name":"star-shaped neurofibrillary tangle","type":"narrow"}],"termid":"GO:0097418"}


id: PR:Q9P3V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.01/SPBC1348.02/SPBPB2B2.19c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C977.01/C1348.02/PB2B2.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.19c","synonyms":[{"name":"Spom972h-SPBPB2B2.19c","type":"exact"}],"termid":"PR:Q9P3V8"}


id: GO:0060430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung saccule from an initial condition to its mature state. The lung saccule is the primitive gas exchange portion of the lung composed of type I and type II cells.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung saccule development","synonyms":[{"name":"lung saccular development","type":"broad"}],"termid":"GO:0060430"}


id: PBO:0038708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 2","termid":"PBO:0038708"}


id: PBO:0004482
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.-.-","termid":"PBO:0004482"}


id: PBO:0083004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Arabinono-1,4-lactone oxidase; catalyzes the final step in biosynthesis of dehydro-D-arabinono-1,4-lactone, which is protective against oxidative stress","termid":"PBO:0083004"}


id: GO:0019456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cysteine transaminase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cysteine transaminase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cysteine transaminase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cysteine transaminase","type":"exact"}],"termid":"GO:0019456"}


id: PATO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001003 relative alternation value (obsolete PATO:0001003)","termid":"PATO:0001003"}


id: PBO:0061696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 214","termid":"PBO:0061696"}


id: PBO:0058399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4771-1","termid":"PBO:0058399"}


id: GO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tocopherol + O2 + NADPH + H+ = 13'-hydroxy-tocopherol + NADP+ + H2O .","definition_xrefs":["MetaCyc:RXN-11003"],"gene_count":0,"genotype_count":0,"name":"obsolete tocopherol omega-hydroxylase activity (obsolete GO:0052870)","synonyms":[{"name":"tocopherol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052870"}


id: PBO:0082884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; forms a functional kinase complex with Pho85p cyclin-dependent kinase (Cdk), expressed in late M/early G1 phase, activated by Swi5p; PCL9 has a paralog, PCL2, that arose from the whole genome duplication","termid":"PBO:0082884"}


id: PBO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 9","termid":"PBO:0044037"}


id: PBO:0035973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_rDNA_during_vegetative_growth","termid":"PBO:0035973"}


id: PBO:0027747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_regulation_of_mitotic_cell_cycle_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027747"}


id: PBO:0039932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 37","termid":"PBO:0039932"}


id: PBO:0042042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 93","termid":"PBO:0042042"}


id: PBO:0044196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin E","termid":"PBO:0044196"}


id: PBO:0055983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 1","termid":"PBO:0055983"}


id: MOD:01652
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with a sulfonyl halide compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}


id: GO:1903950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AV node cell action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:nc","GOC:TermGenie","PMID:25281747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of AV node cell action potential","termid":"GO:0098904"},{"relation_name":"negatively_regulates","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of AV node cell action potential","synonyms":[{"name":"down regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of AV node cell action potential","type":"exact"},{"name":"down regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of AV node cell action potential","type":"exact"},{"name":"down-regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of AV node cell action potential","type":"exact"},{"name":"downregulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of AV node cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of AV node cell action potential","type":"narrow"},{"name":"inhibition of atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903950"}


id: PR:Q09704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21321:SF2","OMA:SCHPO00221","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.14c","secondary_identifiers":["UniProtKB:Q09704"],"synonyms":[{"name":"Spom972h-EXOSC2","type":"exact"},{"name":"ribosomal RNA-processing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09704"}


id: PBO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHCH domain","termid":"PBO:0000939"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["EC:2.3.1.135","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lecithin:11-cis retinol acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12563"],"termid":"GO:0102279"}


id: PBO:0065554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 3","termid":"PBO:0065554"}


id: SO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an UST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST_match","synonyms":[{"name":"UST match","type":"exact"}],"termid":"SO:0001470"}


id: GO:1905034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an antifungal innate immune response.","definition_xrefs":["PMID:22470487","GO_REF:0000058","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal innate immune response","termid":"GO:0061760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antifungal innate immune response","termid":"GO:1905034"}


id: GO:0170012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone H3 position 18] + NAD+ = 2''-O-(2E)-but-2-enoyl-ADP-D-ribose + L-lysyl-[histone H3] + nicotinamide.","definition_xrefs":["PMID:34927582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone decrotonylase activity","termid":"GO:0160012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0016787","GO:0003674","GO:0016810","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H3K18 decrotonylase activity","termid":"GO:0170012"}


id: PBO:0060440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 9","termid":"PBO:0060440"}


id: RO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two neurons connected directly via a synapse, or indirectly via a series of synaptically connected neurons.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_neural_circuit_with","termid":"RO:0000300"}


id: PBO:0092007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine (guu), mitochondrial","termid":"PBO:0092007"}


id: PBO:0049965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 11","termid":"PBO:0049965"}


id: PBO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor Spt5","termid":"PBO:0000754"}


id: PBO:0066728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 25","termid":"PBO:0066728"}


id: GO:0018052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-tyrosine amide by hydrolysis and oxidation of an interior Tyr-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0099"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-tyrosine amidation (obsolete GO:0018052)","termid":"GO:0018052"}


id: PBO:0046276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMG1 N1-specific pseudouridine methyltransferase","termid":"PBO:0046276"}


id: GO:0070297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of phosphorelay signal transduction system","synonyms":[{"name":"regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"regulation of two-component signal transduction system","type":"exact"},{"name":"regulation of two-component signal transduction system (phosphorelay)","type":"narrow"}],"termid":"GO:0070297"}


id: GO:0071762
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgNAR isotype held together by disulfide bonds and lacking immunoglobulin light chains.","definition_xrefs":["GOC:add","PMID:16051357","ISBN:0781765196","PMID:12543123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"heavy chain immunoglobulin complex","synonyms":[{"name":"HCab","type":"narrow"},{"name":"Ig NAR immunoglobulin complex","type":"narrow"},{"name":"IgNAR antibody","type":"narrow"},{"name":"IgNAR immunoglobulin complex","type":"narrow"}],"termid":"GO:0071762"}


id: PBO:0043986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 2 receptor subunit alpha","termid":"PBO:0043986"}


id: FYPO:0005617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005617"}


id: PBO:0057027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-3","termid":"PBO:0057027"}


id: PBO:0071683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 15","termid":"PBO:0071683"}


id: PBO:0071223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 64","termid":"PBO:0071223"}


id: PBO:0077773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 40 like","termid":"PBO:0077773"}


id: PBO:0043601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectin subfamily member 10","termid":"PBO:0043601"}


id: PBO:0077008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 10","termid":"PBO:0077008"}


id: FYPO:0003078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to DNA damage. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PomBase:mah","GO:0031952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to DNA damage","termid":"FYPO:0002898"},{"relation_name":"is_a","term_name":"abolished protein autophosphorylation during vegetative growth","termid":"FYPO:0003020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein autophosphorylation during cellular response to DNA damage","synonyms":[{"name":"abolished protein autophosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein autophosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein autophosphorylation abolished during cellular response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0003078"}


id: PBO:0064486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase nu","termid":"PBO:0064486"}


id: PBO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2463","termid":"PBO:0055048"}


id: PBO:0057461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 580","termid":"PBO:0057461"}


id: PBO:0045302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNM3 intronic transcript 1","termid":"PBO:0045302"}


id: PBO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin-protein ligase E3 Doa10","termid":"PBO:0090265"}


id: GO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 4. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 structural organization","synonyms":[{"name":"rhombomere 4 structural organisation","type":"exact"}],"termid":"GO:0021662"}


id: PBO:0026974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_mitochondrion","termid":"PBO:0026974"}


id: GO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment that is found at the base of the rhabdomere and contains stored calcium, InsP3 receptors and smooth endoplasmic reticulum Ca2+-ATPase.","definition_xrefs":["PMID:11707492","PMID:8646774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"is_a","term_name":"smooth endoplasmic reticulum cisterna","termid":"GO:0120082"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"subrhabdomeral cisterna","synonyms":[{"name":"SMC","type":"related"},{"name":"submicrovillar cisterna","type":"exact"}],"termid":"GO:0016029"}


id: PBO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4 (predicted)","termid":"PBO:0002271"}


id: GO:0016711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavonoid + NADPH + H+ + O2 = 3'-hydroxyflavonoid + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"flavonoid 3'-monooxygenase activity","secondary_identifiers":["MetaCyc:FLAVONOID-3-MONOOXYGENASE-RXN","RHEA:16337"],"synonyms":[{"name":"NADPH:flavonoid-3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3-hydroxylase","type":"related"},{"name":"flavonoid 3-monooxygenase","type":"related"},{"name":"flavonoid,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"}],"termid":"GO:0016711"}


id: PBO:0090361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, unknown specificity","termid":"PBO:0090361"}


id: PBO:0043993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 divergent transcript","termid":"PBO:0043993"}


id: GO:0033722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate + NAD(P)+ + H2O = malonate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"malonate-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-oxopropanoate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"malonic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0033722"}


id: PBO:0040811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 2","termid":"PBO:0040811"}


id: PR:O43070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and telomere maintenance protein nbs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.09c","synonyms":[{"name":"Spom972h-nbs1","type":"exact"}],"termid":"PR:O43070"}


id: PBO:0003615
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar to S. cerevisiae HLJ1, but has different domain arrangement","termid":"PBO:0003615"}


id: GO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A constituent of the extracellular matrix that facilitates attachment of cells to the matrix.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesive extracellular matrix constituent (obsolete GO:0030022)","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"exact"}],"termid":"GO:0030022"}


id: PBO:0080951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 5","termid":"PBO:0080951"}


id: PR:O94301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hfi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator hfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.18c","synonyms":[{"name":"Spom972h-hfi1","type":"exact"}],"termid":"PR:O94301"}


id: GO:1990401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the lung over time, from its formation to the mature structure.","definition_xrefs":["PMID:24785085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic lung development","termid":"GO:1990401"}


id: PBO:0046490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: GO:2000203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal large subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"regulates","term_name":"ribosomal large subunit export from nucleus","termid":"GO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of ribosomal large subunit export from nucleus","synonyms":[{"name":"regulation of 50S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of 60S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal large subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:2000203"}


id: GO:0018996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a collagen and cuticulin-based cuticle, which is then replaced by a new collagen and cuticulin-based cuticle. An example of this is found in the Nematode worm, Caenorhabditis elegans.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, collagen and cuticulin-based cuticle","synonyms":[{"name":"collagen and cuticulin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018996"}


id: PBO:0086310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with potential role in actin cytoskeleton organization; null mutant is slow-growing, sensitive to Congo Red, impaired in endocytosis, has increased lifespan; gene exhibits synthetic genetic interaction with MSS4 encoding phosphatidylinositol 4-phosphate kinase","termid":"PBO:0086310"}


id: GO:0042726
data:
  {"annotated_genes":["SJAG_00491","SJAG_04845","SJAG_02491","SJAG_00480","SJAG_01054","SJAG_00376","SJAG_01937","SJAG_04711","SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[111842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[110234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[102898,97271,83663,110897,111843,103094,106499,113271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_01937":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"flavin-containing compound metabolism","type":"exact"},{"name":"riboflavin and derivative metabolic process","type":"related"},{"name":"riboflavin and derivative metabolism","type":"related"},{"name":"vitamin B2 and derivative metabolic process","type":"related"},{"name":"vitamin B2 and derivative metabolism","type":"related"}],"termid":"GO:0042726","terms_by_termid":{"GO:0006747":null,"GO:0009231":null,"GO:0009398":null,"GO:0046444":null}}


id: GO:0004494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-methylmalonyl-CoA = succinyl-CoA.","definition_xrefs":["EC:5.4.99.2","RHEA:22888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"methylmalonyl-CoA mutase activity","secondary_identifiers":["KEGG_REACTION:R00833","MetaCyc:METHYLMALONYL-COA-MUT-RXN","Reactome:R-HSA-71010","UM-BBD_reactionID:r0922","Reactome:R-HSA-3322971"],"synonyms":[{"name":"(R)-2-methyl-3-oxopropanoyl-CoA CoA-carbonylmutase activity","type":"related"},{"name":"(R)-methylmalonyl-CoA CoA-carbonylmutase activity","type":"related"},{"name":"(S)-methylmalonyl-CoA mutase activity","type":"related"},{"name":"methylmalonyl coenzyme A carbonylmutase activity","type":"related"},{"name":"methylmalonyl coenzyme A mutase activity","type":"related"},{"name":"methylmalonyl-CoA CoA-carbonyl mutase activity","type":"related"}],"termid":"GO:0004494"}


id: PBO:0090128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L67","termid":"PBO:0090128"}


id: PBO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bafilomycin_A1","termid":"PBO:0031466"}


id: PBO:0057235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 422a","termid":"PBO:0057235"}


id: GO:0010628
data:
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id: PBO:0067769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 69","termid":"PBO:0067769"}


id: GO:1990004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: XDP + H2O = XMP + phosphate.","definition_xrefs":["PMID:20385596"],"gene_count":0,"genotype_count":0,"name":"obsolete XDP phosphatase activity (obsolete GO:1990004)","termid":"GO:1990004"}


id: GO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxystearate + NAD+ = 2-oxostearate + H+ + NADH.","definition_xrefs":["EC:1.1.1.98","RHEA:15949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-2-hydroxy-fatty acid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03021","MetaCyc:1.1.1.98-RXN"],"synonyms":[{"name":"(R)-2-hydroxy-fatty-acid dehydrogenase activity","type":"exact"},{"name":"(R)-2-hydroxystearate:NAD+ oxidoreductase activity","type":"related"},{"name":"2-hydroxy fatty acid oxidase","type":"broad"},{"name":"D-2-hydroxy fatty acid dehydrogenase activity","type":"related"}],"termid":"GO:0047049"}


id: PBO:0041853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 3","termid":"PBO:0041853"}


id: PBO:0070121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 35 pseudogene","termid":"PBO:0070121"}


id: GO:0080010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["PMID:18450450"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0080010)","synonyms":[{"name":"regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0080010"}


id: PBO:0027354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyruvate_decarboxylase_activity_during_stationary_phase","termid":"PBO:0027354"}


id: GO:1990264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any peptidyl-tyrosine dephosphorylation that is involved in inactivation of protein kinase activity.","definition_xrefs":["PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"},{"relation_name":"part_of","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity","termid":"GO:1990264"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_00437","SJAG_02903","SJAG_04770","SJAG_03764","SJAG_04954","SJAG_04821","SJAG_02102","SJAG_00334","SJAG_05219","SJAG_00747","SJAG_03774","SJAG_02163","SJAG_03311","SJAG_03656","SJAG_00554","SJAG_03056","SJAG_00394","SJAG_01950","SJAG_00924","SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93923,104135,96133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[102834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[94485,94817,90042,108677,107205,83694,86544,112859,94538,87280,96134,101109,96117,99701,92565,105412,98426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006488"},{"annotations":[96135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0006488":null,"GO:0016095":null,"GO:0019348":null,"GO:0019408":null}}


id: PBO:0083296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene RFC1/YOR217W","termid":"PBO:0083296"}


id: PBO:0091674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tgp1 sense interfering RNA","termid":"PBO:0091674"}


id: GO:0045143
data:
  {"annotated_genes":["SJAG_04457","SJAG_03989","SJAG_02346","SJAG_04076","SJAG_03217","SJAG_00756","SJAG_03683","SJAG_01263","SJAG_03287","SJAG_01805","SJAG_04143","SJAG_05226","SJAG_03698","SJAG_04259","SJAG_03680","SJAG_05220","SJAG_05019","SJAG_00418","SJAG_01873","SJAG_01371","SJAG_01278","SJAG_00794","SJAG_00918","SJAG_02286","SJAG_00600","SJAG_03220","SJAG_01601","SJAG_03942","SJAG_05319","SJAG_05266","SJAG_03327","SJAG_05196","SJAG_03437","SJAG_01775","SJAG_00727","SJAG_01211","SJAG_01224","SJAG_03685","SJAG_05295","SJAG_04623","SJAG_05260","SJAG_00229","SJAG_02731","SJAG_02606","SJAG_02104","SJAG_03048","SJAG_01837","SJAG_04950","SJAG_03926","SJAG_01777","SJAG_04126","SJAG_03681","SJAG_01538","SJAG_01082","SJAG_07002","SJAG_02814","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85537,87933,89940,90024,106307,109352,110615,113801],"is_not":false,"summary":null,"term":"GO:0045143"},{"annotations":[84008,97455,113169,103942,94759,89939,86456,111649,109909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[89013,106676,107343,83952,103943],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[113170,85766],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[85937,102060],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[83594,101210,98947,85938,96042],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[103944,112020,97921,109910,97398,109353,100616,95258,89943,110617],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[102061,112063,92860,113652,113789,83595],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[102062,110112],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[106310,90029],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090006"},{"annotations":[98521],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"},{"annotations":[112803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[106439,91710,105008,106480,103625,110220,85922,101588,94767,106018,98568,109356,113032,85322,89956,97459,103946,105269,87142,96646,112045,94050,91456],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets.","definition_xrefs":["ISBN:0815316194","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00418":null,"SJAG_00600":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01538":null,"SJAG_01601":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_02104":null,"SJAG_02286":null,"SJAG_02346":null,"SJAG_02606":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03287":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03680":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04143":null,"SJAG_04259":null,"SJAG_04457":null,"SJAG_04623":null,"SJAG_04950":null,"SJAG_05019":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007061"],"synonyms":[{"name":"meiosis I, chromosome segregation","type":"exact"}],"termid":"GO:0045143","terms_by_termid":{"GO:0007129":null,"GO:0030999":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0045143":null,"GO:0051455":null,"GO:0062123":null,"GO:0070197":null,"GO:0090006":null,"GO:1904967":null,"GO:1990813":null}}


id: FYPO:0001766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA methylation, the posttranscriptional addition of methyl groups to specific residues in a tRNA molecule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal tRNA methylation","synonyms":[{"name":"abnormal tRNA methylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001766"}


id: PBO:0065219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase associated protein 2","termid":"PBO:0065219"}


id: PBO:0066482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0066482"}


id: PBO:0027846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_multinucleate_vegetative_cell","termid":"PBO:0027846"}


id: PBO:0040500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A pseudogene 2","termid":"PBO:0040500"}


id: PBO:0060336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 1","termid":"PBO:0060336"}


id: PBO:0076634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked pseudogene 1","termid":"PBO:0076634"}


id: PR:Q9P7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.08c","secondary_identifiers":["UniProtKB:Q9P7S5"],"synonyms":[{"name":"Spom972h-USP20","type":"exact"},{"name":"deubiquitinating enzyme 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S5"}


id: GO:1905110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["PMID:22161164","GOC:bc","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel remodeling","termid":"GO:0060313"},{"relation_name":"is_a","term_name":"regulation of pulmonary blood vessel remodeling","termid":"GO:1905109"},{"relation_name":"negatively_regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"down regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"down-regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"downregulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"inhibition of pulmonary blood vessel remodeling","type":"narrow"},{"name":"negative regulation of pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:1905110"}


id: GO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + NADP+ = D-glucurono-3,6-lactone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.20","RHEA:18925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucuronolactone reductase activity","secondary_identifiers":["KEGG_REACTION:R03183","MetaCyc:GLUCURONOLACTONE-REDUCTASE-RXN"],"termid":"GO:0047941"}


id: RO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds via some environmental process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evolutionarily_related_to","termid":"RO:0002320"}


id: GO:0014010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation","termid":"GO:0014010"}


id: PR:Q10179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10745:SF0","OMA:SCHPO01183","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.03","secondary_identifiers":["UniProtKB:Q10179"],"synonyms":[{"name":"AP-4-A synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GlyRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GARS","type":"exact"},{"name":"diadenosine tetraphosphate synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10179"}


id: FYPO:0006012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, and does not form a mating projection under conditions that normally induce shmooing.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished shmoo formation","termid":"FYPO:0000569"},{"relation_name":"is_a","term_name":"elongated cell during nitrogen starvation","termid":"FYPO:0000998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000301","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell with abolished shmoo formation","synonyms":[{"name":"elongated cell with abolished shmoo formation during nitrogen starvation","type":"exact"},{"name":"elongated non-mated cell","type":"related"},{"name":"large non-mated cells","type":"related"}],"termid":"FYPO:0006012"}


id: GO:0036101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["PMID:9799565","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"leukotriene B4 catabolic process","synonyms":[{"name":"LTB4 catabolism","type":"exact"},{"name":"leukotriene B4 breakdown","type":"exact"},{"name":"leukotriene B4 catabolism","type":"exact"},{"name":"leukotriene B4 degradation","type":"exact"}],"termid":"GO:0036101"}


id: PBO:0031566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-catalytic_activity_phenotype","termid":"PBO:0031566"}


id: PBO:0004986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epimarase (predicted)","termid":"PBO:0004986"}


id: GO:0099141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to protozoan","termid":"GO:0099141"}


id: GO:1990068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The seed development process whose outcome is the drying of a maturing seed.","definition_xrefs":["PMID:20138563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed dehydration","termid":"GO:1990068"}


id: PBO:0046241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 35","termid":"PBO:0046241"}


id: PBO:0084821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function involved in lipid homeostasis; integral membrane protein that localizes to the mitochondrial outer membrane; involved in mitochondrial morphology; interacts genetically with MDM10, and other members of the ERMES complex; contains five predicted transmembrane domains","termid":"PBO:0084821"}


id: GO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a macrophage cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage cytokine production","termid":"GO:0010934"}


id: GO:2000158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin-specific protease (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-specific protease activity","termid":"GO:2000152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-specific protease activity","synonyms":[{"name":"positive regulation of UBP","type":"related"},{"name":"positive regulation of UCH2","type":"related"},{"name":"positive regulation of deubiquitinase activity","type":"exact"},{"name":"positive regulation of ubiquitin hydrolase activity","type":"exact"}],"termid":"GO:2000158"}


id: GO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population contributing to sprouting angiogenesis.","definition_xrefs":["GOC:tb","PMID:16391003","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell proliferation","termid":"GO:0001935"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:0002043"}


id: PBO:0047987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member D, pseudogene","termid":"PBO:0047987"}


id: GO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catabolism in the mitochondrion of RNA transcribed from the mitochondrial genome.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"negatively_regulates","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial RNA catabolic process","termid":"GO:0000961"}


id: PBO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds Homol E","termid":"PBO:0002157"}


id: FYPO:0001432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethidium bromide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to ethidium bromide","synonyms":[{"name":"resistance to EtBr","type":"exact"},{"name":"resistance to ethidium bromide during mitotic cell cycle","type":"related"},{"name":"resistance to ethidium bromide during vegetative growth","type":"exact"},{"name":"resistant to ethidium bromide","type":"exact"}],"termid":"FYPO:0001432"}


id: PBO:0081784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF710 antisense RNA 1","termid":"PBO:0081784"}


id: PBO:0004689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10 (predicted)","termid":"PBO:0004689"}


id: PBO:0039349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and beclin 1 regulator 1","termid":"PBO:0039349"}


id: PBO:0063689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase pseudogene 1","termid":"PBO:0063689"}


id: GO:0030139
data:
  {"annotated_genes":["SJAG_00800","SJAG_02833","SJAG_00104","SJAG_01189","SJAG_03146","SJAG_02805","SJAG_03504","SJAG_00677","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89965,103675,106812,106912,111576],"is_not":false,"summary":null,"term":"GO:0030139"},{"annotations":[104452,107770,107711,92406],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.","definition_xrefs":["PMID:19696797","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00677":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01189":null,"SJAG_02805":null,"SJAG_02833":null,"SJAG_03146":null,"SJAG_03504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"endocytic vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1362520468"],"synonyms":[{"name":"endocytotic transport vesicle","type":"exact"},{"name":"endocytotic vesicle","type":"exact"}],"termid":"GO:0030139","terms_by_termid":{"GO:0030122":null,"GO:0030139":null}}


id: PBO:0064976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 32, pseudogene","termid":"PBO:0064976"}


id: PBO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 122 (pseudogene)","termid":"PBO:0044834"}


id: GO:0099566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099566"}


id: PBO:0032697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_mitotic_spindle_elongation_during_anaphase_B","termid":"PBO:0032697"}


id: GO:0045442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + deacetoxycephalosporin C + O2 = CO2 + deacetylcephalosporin C + succinate.","definition_xrefs":["RHEA:16805","EC:1.14.11.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"deacetoxycephalosporin-C hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05229","MetaCyc:1.14.11.26-RXN"],"synonyms":[{"name":"3'-methylcephem hydroxylase activity","type":"related"},{"name":"DACS","type":"related"},{"name":"DAOC hydroxylase activity","type":"related"},{"name":"beta-lactam hydroxylase activity","type":"exact"},{"name":"deacetoxycephalosporin C hydroxylase activity","type":"related"},{"name":"deacetoxycephalosporin-C,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"deacetylcephalosporin C synthase activity","type":"related"}],"termid":"GO:0045442"}


id: PBO:0005278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Spc7","termid":"PBO:0005278"}


id: FYPO:0000099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to canavanine. Cells stop growing (and may die) at a concentration of canavanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to canavanine","synonyms":[{"name":"hypersensitive to canavanine","type":"exact"},{"name":"sensitive to canavanine during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine during vegetative growth","type":"exact"}],"termid":"FYPO:0000099"}


id: PBO:0069366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 626, pseudogene","termid":"PBO:0069366"}


id: PBO:0084602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR391W was originally annotated as an independent ORF, but was completely contained in larger ORF YLR391W-A in the same frame, and was merged into it on 7-30-1997","termid":"PBO:0084602"}


id: GO:0052322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of phytoalexin biosynthetic process","termid":"GO:0052319"},{"relation_name":"is_a","term_name":"positive regulation of phytoalexin metabolic process","termid":"GO:0052320"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of phytoalexin biosynthetic process","synonyms":[{"name":"activation of phytoalexin biosynthesis","type":"narrow"},{"name":"positive regulation of phytoalexin biosynthesis","type":"exact"},{"name":"stimulation of phytoalexin biosynthesis","type":"narrow"},{"name":"up regulation of phytoalexin biosynthesis","type":"exact"},{"name":"up-regulation of phytoalexin biosynthesis","type":"exact"},{"name":"upregulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052322"}


id: PBO:0068536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 139, pseudogene","termid":"PBO:0068536"}


id: GO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a decyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"decanoyltransferase activity","termid":"GO:0034328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"O-decanoyltransferase activity","termid":"GO:0034325"}


id: GO:0102161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: copal-8-ol diphosphate = 2-trans,6-trans,10-trans-geranylgeranyl diphosphate + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"copal-8-ol diphosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-11772","RHEA:32703"],"termid":"GO:0102161"}


id: PBO:0054880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2294","termid":"PBO:0054880"}


id: GO:1905605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["PMID:22524708","GOC:TermGenie","GOC:bc","GOC:als","PMID:30280653","GO_REF:0000058","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood-brain barrier permeability","synonyms":[{"name":"activation of maintenance of permeability of BBB","type":"narrow"},{"name":"activation of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"positive regulation of BBB permeability","type":"exact"},{"name":"positive regulation of blood/brain barrier permeability","type":"exact"},{"name":"up-regulation of BBB permeability","type":"exact"},{"name":"up-regulation of blood-brain barrier permeability","type":"exact"},{"name":"up-regulation of blood/brain barrier permeability","type":"exact"},{"name":"upregulation of BBB permeability","type":"exact"},{"name":"upregulation of blood-brain barrier permeability","type":"exact"},{"name":"upregulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905605"}


id: FYPO:0003535
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115319],"is_not":false,"summary":null,"term":"FYPO:0003535"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the bipolar index is lower than normal. The bipolar index is the proportion of the population undergoing bipolar growth at any given time.","definition_xrefs":["PomBase:al","PMID:20501954","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased bipolar index","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"decreased frequency of bipolar growth polarity","type":"related"},{"name":"decreased number of cells undergoing bipolar growth","type":"exact"},{"name":"reduced bipolar index","type":"exact"}],"termid":"FYPO:0003535","terms_by_termid":{"FYECO:0000162":null,"FYPO:0003535":null}}


id: GO:0034093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"is_a","term_name":"positive regulation of sister chromatid cohesion","termid":"GO:0045876"},{"relation_name":"positively_regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"}


id: GO:0019567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arabinose, arabino-pentose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"},{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"arabinose biosynthetic process","synonyms":[{"name":"arabinose anabolism","type":"exact"},{"name":"arabinose biosynthesis","type":"exact"},{"name":"arabinose formation","type":"exact"},{"name":"arabinose synthesis","type":"exact"}],"termid":"GO:0019567"}


id: GO:0003879
data:
  {"annotated_genes":["SJAG_04747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90896],"is_not":false,"summary":null,"term":"GO:0003879"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + diphosphate = ATP + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"ATP phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:18473","MetaCyc:ATPPHOSPHORIBOSYLTRANS-RXN"],"synonyms":[{"name":"1-(5-phospho-D-ribosyl)-ATP:diphosphate phospho-alpha-D-ribosyl-transferase activity","type":"related"},{"name":"adenosine triphosphate phosphoribosyltransferase activity","type":"related"},{"name":"phosphoribosyl ATP synthetase activity","type":"related"},{"name":"phosphoribosyl ATP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"phosphoribosyl-ATP diphosphorylase activity","type":"related"},{"name":"phosphoribosyl-ATP pyrophosphorylase activity","type":"related"},{"name":"phosphoribosyl-ATP:pyrophosphate-phosphoribosyl phosphotransferase activity","type":"related"},{"name":"phosphoribosyladenosine triphosphate pyrophosphorylase activity","type":"related"},{"name":"phosphoribosyladenosine triphosphate synthetase activity","type":"related"},{"name":"phosphoribosyladenosine triphosphate:pyrophosphate phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0003879","terms_by_termid":{"GO:0003879":null}}


id: GO:1905427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any intracellular signal transduction that is involved in positive regulation of cell growth.","definition_xrefs":["GOC:TermGenie","PMID:15917811","GOC:vw","GO_REF:0000060","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular signal transduction involved in positive regulation of cell growth (obsolete GO:1905427)","synonyms":[{"name":"intracellular protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signal transduction pathway involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"intracellular signaling chain involved in activation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in positive regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signaling pathway involved in activation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in upregulation of cell growth","type":"related"},{"name":"protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"signal transduction via intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"signal transmission via intracellular cascade involved in activation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in stimulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in upregulation of cell growth","type":"narrow"}],"termid":"GO:1905427"}


id: PBO:0040869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMF antisense RNA 1","termid":"PBO:0040869"}


id: PBO:0112752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2, Agm2","termid":"PBO:0112752"}


id: GO:0033131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of hexokinase activity","termid":"GO:1903299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"regulation of glucokinase activity","synonyms":[{"name":"glucokinase regulator","type":"narrow"}],"termid":"GO:0033131"}


id: CHEBI:21759
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methyl-N'-nitro-N-nitrosoguanidine","termid":"CHEBI:21759"}


id: GO:1904453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:TermGenie","PMID:11897793","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"regulation of potassium:proton exchanging ATPase activity","termid":"GO:1904451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium:proton exchanging ATPase activity","synonyms":[{"name":"activation of (K+ + H+)-ATPase activity","type":"narrow"},{"name":"activation of ATP phosphohydrolase (H+/K+-exchanging)","type":"narrow"},{"name":"activation of H+-K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"activation of H+/K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K+-exchanging ATPase activity","type":"narrow"},{"name":"activation of H,K-ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K+ ATPase","type":"narrow"},{"name":"activation of hydrogen/potassium-exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium-exchanging ATPase activity","type":"narrow"},{"name":"positive regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"positive regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"positive regulation of H+-K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H,K-ATPase activity","type":"exact"},{"name":"positive regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"positive regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"positive regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H,K-ATPase activity","type":"exact"},{"name":"up regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up-regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up-regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H,K-ATPase activity","type":"exact"},{"name":"up-regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up-regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up-regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"upregulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"upregulation of H+-K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H,K-ATPase activity","type":"exact"},{"name":"upregulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"upregulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"upregulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1904453"}


id: GO:0045682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermis development","synonyms":[{"name":"regulation of epidermal development","type":"exact"},{"name":"regulation of hypodermis development","type":"related"}],"termid":"GO:0045682"}


id: GO:0098926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynaptic signal transduction","synonyms":[{"name":"postsynaptic signaling pathway","type":"exact"}],"termid":"GO:0098926"}


id: GO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-10 = S-adenosyl-L-homocysteine + ubiquinol-10.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-10 3-O-methyltransferase activity (obsolete GO:0044596)","termid":"GO:0044596"}


id: PBO:0054998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2413","termid":"PBO:0054998"}


id: PR:G2TRT6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.16 gene.","definition_xrefs":["UniProtKB:G2TRT6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.16","synonyms":[{"name":"Spom972h-SPCC417.16","type":"exact"}],"termid":"PR:G2TRT6"}


id: PBO:0079069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-3","termid":"PBO:0079069"}


id: PBO:0073386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 2, histone lysine methyltransferase","termid":"PBO:0073386"}


id: SO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_feature with an extent of zero.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_feature","termid":"SO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction","synonyms":[{"name":"boundary","type":"exact"},{"name":"breakpoint","type":"exact"}],"termid":"SO:0000699"}


id: PBO:0039255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 4 family member A1","termid":"PBO:0039255"}


id: GO:0043262
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110087],"is_not":false,"summary":null,"term":"GO:0043262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H2O = AMP + phosphate + H+.","definition_xrefs":["PMID:1470606","RHEA:61436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ADP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10862"],"synonyms":[{"name":"ADP diphosphatase activity","type":"broad"},{"name":"ADPase","type":"broad"},{"name":"ADPase activity","type":"related"},{"name":"ATP diphosphohydrolase activity","type":"related"},{"name":"ATP-diphosphatase activity","type":"related"},{"name":"adenosine diphosphatase activity","type":"related"},{"name":"adenosine-diphosphatase activity","type":"exact"}],"termid":"GO:0043262","terms_by_termid":{"GO:0043262":null}}


id: GO:1905176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GOC:rph","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","PMID:19088079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell dedifferentiation","termid":"GO:1905174"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"activation of vascular smooth muscle cell dedifferentiation","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905176"}


id: PBO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog (predicted)","termid":"PBO:0004086"}


id: PATO:0001030
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that exists by virtue of the rate of flow of the bearer across a given surface.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flux","termid":"PATO:0001030"}


id: PBO:0056647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 8","termid":"PBO:0056647"}


id: PBO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_mitosis","termid":"PBO:0036076"}


id: GO:0090565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannitol(out) = protein cysteine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0022857","GO:0003674","GO:0016740","GO:0005215"],"is_obsolete":false,"name":"protein-phosphocysteine-mannitol phosphotransferase system transporter activity","termid":"GO:0090565"}


id: PR:O94313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbamoyl-phosphate synthase [ammonia], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase arginine-specific large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.08c","secondary_identifiers":["UniProtKB:O94313"],"synonyms":[{"name":"Spom972h-CPS1","type":"exact"},{"name":"arginine-specific carbamoyl-phosphate synthetase, ammonia chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94313"}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: GO:0019472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxyproline metabolic process","termid":"GO:0019471"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyproline biosynthetic process","synonyms":[{"name":"4-hydroxyproline anabolism","type":"exact"},{"name":"4-hydroxyproline biosynthesis","type":"exact"},{"name":"4-hydroxyproline formation","type":"exact"},{"name":"4-hydroxyproline synthesis","type":"exact"}],"termid":"GO:0019472"}


id: GO:0015719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of allantoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"allantoate transport","synonyms":[{"name":"allantoin/allantoate transport","type":"broad"}],"termid":"GO:0015719"}


id: GO:0102386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylethanol + NADP = phenylacetaldehyde + NADPH + H+.","definition_xrefs":["PMID:17644147","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylacetaldehyde reductase activity","secondary_identifiers":["MetaCyc:RXN-13536"],"termid":"GO:0102386"}


id: GO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a neuron cell body - excludes the plasma membrane of cell projections such as axons and dendrites.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body membrane","termid":"GO:0044298"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"neuronal cell body membrane","synonyms":[{"name":"neuron cell body membrane","type":"exact"},{"name":"neuronal cell soma membrane","type":"exact"}],"termid":"GO:0032809"}


id: PBO:0045991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 5","termid":"PBO:0045991"}


id: GO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3a product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"complement component C3a binding","termid":"GO:0001850"}


id: PATO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's bing full of small openings or gaps.","direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"looseness","termid":"PATO:0002010"}


id: PBO:0059532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asp (GAU/C)","termid":"PBO:0059532"}


id: PBO:0068712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear","termid":"PBO:0068712"}


id: PBO:0060511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acyl phosphatidylethanolamine phospholipase D","termid":"PBO:0060511"}


id: PBO:0068204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 511","termid":"PBO:0068204"}


id: PBO:0048812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase","termid":"PBO:0048812"}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: PBO:0067252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 326, pseudogene","termid":"PBO:0067252"}


id: PBO:0108984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 8","termid":"PBO:0108984"}


id: GO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism.","definition_xrefs":["GOC:klp","PMID:10595640"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidase activity in other organism (obsolete GO:0035940)","synonyms":[{"name":"down regulation of peptidase activity in other organism","type":"exact"},{"name":"down-regulation of protease activity in other organism","type":"narrow"},{"name":"downregulation of peptidase activity in other organism","type":"exact"},{"name":"inhibition of protease activity in other organism","type":"narrow"},{"name":"negative regulation of protease activity in other organism","type":"narrow"}],"termid":"GO:0035940"}


id: PATO:0002390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.","definition_xrefs":["PATO:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radius","termid":"PATO:0002390"}


id: FYPO:0005259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population reaches stationary phase at, and maintains, a higher cell density than wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell density in stationary phase","termid":"FYPO:0005259"}


id: PBO:0091738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A1-like ortholog, implicated in endocytosis","termid":"PBO:0091738"}


id: PBO:0047444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor Ic, pseudogene","termid":"PBO:0047444"}


id: PBO:0077355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 95","termid":"PBO:0077355"}


id: GO:0140093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An embryonic stem cell-specific SWI/SNF-type complex that contains eight or nine proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or an ortholog thereof. Compared to many other BAF complexes never contains ACTL6B/BAF53B, ARID1B/BAF250B, SMARCA2/BRM, SMARCC2/BAF170 or SMARCD3/BAF60C but contains PHF10/BAF45A, DPF2/BAF45D and possibly one of BCL7A/B/C.","definition_xrefs":["PMID:19279218","PMID:2620226","PMID:8895581","PMID:19279220","PMID:8804307","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"esBAF complex","synonyms":[{"name":"embryonic stem cell-specific BAF complex","type":"exact"},{"name":"embryonic stem cell-specific SWI/SNF complex","type":"exact"}],"termid":"GO:0140093"}


id: GO:0051029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of rRNA, ribosomal ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"rRNA transport","termid":"GO:0051029"}


id: GO:0075296
data:
  {"annotated_genes":["SJAG_04853","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98417],"is_not":false,"summary":null,"term":"GO:0075296"},{"annotations":[86893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0007049","GO:0030437","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075296","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: FYPO:0000498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial transport","synonyms":[{"name":"mitochondrial transport: normal","type":"related"},{"name":"normal mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000498"}


id: PR:Q9P7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.02c gene.","definition_xrefs":["UniProtKB:Q9P7Q1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.02c","synonyms":[{"name":"Spom972h-SPAC186.02c","type":"exact"}],"termid":"PR:Q9P7Q1"}


id: FYPO:0002829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phytochelatin level","synonyms":[{"name":"decreased cellular cadystin level","type":"exact"},{"name":"decreased cellular phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phytochelatin level during vegetative growth","type":"exact"},{"name":"decreased phytochelatin accumulation","type":"related"},{"name":"reduced cellular phytochelatin level","type":"exact"}],"termid":"FYPO:0002829"}


id: PBO:0004053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cysteine desulfurase Nfs1 (predicted)","termid":"PBO:0004053"}


id: GO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the proepicardium from its formation to the mature structure. The proepicardium is an outpouching of the septum transversum.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"septum transversum development","termid":"GO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proepicardium development","termid":"GO:0003342"}


id: PBO:0003669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human c15orf24 ortholog","termid":"PBO:0003669"}


id: PBO:0025452
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III deficiency","termid":"PBO:0025452"}


id: GO:0034794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopropanecarboxyl-CoA = crotonoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"cyclopropanecarboxyl-CoA decyclase activity","secondary_identifiers":["EC:5.5.1.-"],"termid":"GO:0034794"}


id: GO:1900243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle endocytosis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle endocytosis","termid":"GO:1900242"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle recycling","termid":"GO:1903422"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle endocytosis","synonyms":[{"name":"down regulation of synaptic vesicle endocytosis","type":"exact"},{"name":"down regulation of synaptic vesicle retrieval","type":"related"},{"name":"down-regulation of synaptic vesicle endocytosis","type":"exact"},{"name":"down-regulation of synaptic vesicle retrieval","type":"related"},{"name":"downregulation of synaptic vesicle endocytosis","type":"exact"},{"name":"downregulation of synaptic vesicle retrieval","type":"related"},{"name":"inhibition of synaptic vesicle endocytosis","type":"narrow"},{"name":"inhibition of synaptic vesicle retrieval","type":"related"},{"name":"negative regulation of synaptic vesicle retrieval","type":"related"}],"termid":"GO:1900243"}


id: GO:1900570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diorcinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diorcinol metabolic process","synonyms":[{"name":"diorcinol metabolism","type":"exact"}],"termid":"GO:1900570"}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: PBO:0069165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 417, pseudogene","termid":"PBO:0069165"}


id: GO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["PMID:20920515","GOC:fj","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of calcium channel activity in another organism","termid":"GO:0035916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium channel activity in another organism","synonyms":[{"name":"down-regulation of calcium channel activity in other organism","type":"exact"},{"name":"downregulation of calcium channel activity in other organism","type":"exact"},{"name":"inhibition of calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035917"}


id: PBO:0070726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 31","termid":"PBO:0070726"}


id: PBO:0080412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS39 divergent transcript","termid":"PBO:0080412"}


id: PBO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4 (predicted)","termid":"PBO:0003327"}


id: GO:0009256
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104466,108536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"10-formyltetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"10-formyl-THF metabolic process","type":"exact"},{"name":"10-formyl-THF metabolism","type":"exact"},{"name":"10-formyltetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0009256","terms_by_termid":{"GO:0009257":null}}


id: GO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a chemoattractant and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled chemoattractant receptor activity","synonyms":[{"name":"G protein chemoattractant receptor activity","type":"exact"},{"name":"G-protein chemoattractant receptor activity","type":"exact"},{"name":"G-protein coupled chemoattractant receptor activity","type":"exact"}],"termid":"GO:0001637"}


id: PBO:0067907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 209","termid":"PBO:0067907"}


id: PBO:0070555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 21","termid":"PBO:0070555"}


id: PBO:0004812
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.117","termid":"PBO:0004812"}


id: PBO:0027768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_mitotic_spindle_during_anaphase","termid":"PBO:0027768"}


id: PBO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transporter (predicted)","termid":"PBO:0008038"}


id: GO:0048540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bursa of Fabricius over time, from its formation to the mature structure. The bursa of Fabricius is an organ found in birds involved in B cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bursa of Fabricius development","termid":"GO:0048540"}


id: PBO:0058579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6516","termid":"PBO:0058579"}


id: PR:Q9C0X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB8E5.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.10","synonyms":[{"name":"Spom972h-SPAPB8E5.10","type":"exact"}],"termid":"PR:Q9C0X5"}


id: GO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triethanolamine = diethanolamine + acetaldehyde.","definition_xrefs":["UM-BBD_enzymeID:e0421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"triethanolamine lyase activity","termid":"GO:0018825"}


id: PR:O14207
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mus7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mms22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.02c","synonyms":[{"name":"Spom972h-mus7","type":"exact"},{"name":"protein mus7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14207"}


id: PBO:0091215
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA","termid":"PBO:0091215"}


id: PBO:0064578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member A","termid":"PBO:0064578"}


id: PBO:0058133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4433b","termid":"PBO:0058133"}


id: PBO:0065657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRG antisense RNA 1","termid":"PBO:0065657"}


id: GO:1900904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of hexadecanal biosynthetic process","termid":"GO:1900902"},{"relation_name":"is_a","term_name":"positive regulation of hexadecanal metabolic process","termid":"GO:1900907"},{"relation_name":"positively_regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexadecanal biosynthetic process","synonyms":[{"name":"activation of hexadecanal anabolism","type":"narrow"},{"name":"activation of hexadecanal biosynthesis","type":"narrow"},{"name":"activation of hexadecanal biosynthetic process","type":"narrow"},{"name":"activation of hexadecanal formation","type":"narrow"},{"name":"activation of hexadecanal synthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthetic process","type":"related"},{"name":"positive regulation of hexadecanal anabolism","type":"related"},{"name":"positive regulation of hexadecanal biosynthesis","type":"related"},{"name":"positive regulation of hexadecanal formation","type":"related"},{"name":"positive regulation of hexadecanal synthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up regulation of hexadecanal anabolism","type":"related"},{"name":"up regulation of hexadecanal biosynthesis","type":"related"},{"name":"up regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up regulation of hexadecanal formation","type":"related"},{"name":"up regulation of hexadecanal synthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up-regulation of hexadecanal anabolism","type":"related"},{"name":"up-regulation of hexadecanal biosynthesis","type":"related"},{"name":"up-regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up-regulation of hexadecanal formation","type":"related"},{"name":"up-regulation of hexadecanal synthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"upregulation of hexadecanal anabolism","type":"related"},{"name":"upregulation of hexadecanal biosynthesis","type":"related"},{"name":"upregulation of hexadecanal biosynthetic process","type":"exact"},{"name":"upregulation of hexadecanal formation","type":"related"},{"name":"upregulation of hexadecanal synthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthetic process","type":"related"}],"termid":"GO:1900904"}


id: PBO:0086457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; may regulate purine nucleotide homeostasis as overexpression in an AMD1 strain grown in adenine results in greatly reduced GDP and GTP intracellular levels; not an essential gene; YJL070C has a paralog, YBR284W, that arose from the whole genome duplication","termid":"PBO:0086457"}


id: PBO:0053775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1020","termid":"PBO:0053775"}


id: MOD:00556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +94","synonyms":[{"name":"Acrolein addition +94","type":"related"},{"name":"Delta:H(6)C(6)O(1)","type":"related"}],"termid":"MOD:00556"}


id: FYPO:0000105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cyclosporin A. Cells stop growing (and may die) at a concentration of cyclosporin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cyclosporin A","synonyms":[{"name":"hypersensitive to cyclosporin A","type":"exact"},{"name":"sensitive to cyclosporin A during mitotic cell cycle","type":"related"},{"name":"sensitive to cyclosporin A during vegetative growth","type":"exact"},{"name":"sensitive to cyclosporine","type":"exact"}],"termid":"FYPO:0000105"}


id: PBO:0059464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 3","termid":"PBO:0059464"}


id: MOD:00769
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 71.0-71.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"}


id: GO:0090576
data:
  {"annotated_genes":["SJAG_01827","SJAG_02815","SJAG_03546","SJAG_00421","SJAG_05339","SJAG_03120","SJAG_00585","SJAG_03007","SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99196,112328,91726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[84380,103040,108768,111477,105255,95706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase III.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase III transcription regulator complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase III transcription factor complex","type":"narrow"}],"termid":"GO:0090576","terms_by_termid":{"GO:0000126":null,"GO:0000127":null}}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["PMID:20711475","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: PBO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 16","termid":"PBO:0071175"}


