# terms

id: GO:0031086
data:
  {"annotated_genes":["SJAG_02370","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101691,88687],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031087"},{"annotations":[87812],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"A pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of steps that is independent of deadenylation, but requires decapping followed by transcript decay, and that can regulate mRNA stability.","definition_xrefs":["PMID:15225544","GOC:krc","PMID:15225542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent mRNA decay","type":"exact"},{"name":"deadenylylation-independent mRNA decay","type":"exact"},{"name":"mRNA breakdown, deadenylation-independent decay","type":"exact"},{"name":"mRNA catabolic process, deadenylation-independent","type":"exact"},{"name":"mRNA catabolic process, deadenylylation-independent","type":"exact"},{"name":"mRNA catabolism, deadenylation-independent","type":"exact"},{"name":"mRNA catabolism, deadenylation-independent decay","type":"exact"},{"name":"mRNA catabolism, deadenylylation-independent","type":"exact"},{"name":"mRNA degradation, deadenylation-independent decay","type":"exact"},{"name":"nuclear mRNA catabolic process, deadenylation-independent decay","type":"exact"}],"termid":"GO:0031086","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: PBO:0047163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member B2, pseudogene","termid":"PBO:0047163"}


id: PBO:0012065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein (predicted)","termid":"PBO:0012065"}


id: PBO:0077232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 8","termid":"PBO:0077232"}


id: GO:0021871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process resulting in the creation of areas within the forebrain that will direct the behavior of cell migration in differentiation as the forebrain develops.","definition_xrefs":["GOC:isa_complete","GOC:dgh","PMID:16226447","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain regionalization","termid":"GO:0021871"}


id: GO:0050595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-deoxyloganin + O2 + reduced [NADPH-hemoprotein reductase] = H+ + H2O + loganin + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:11452","PMID:11524113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7-deoxyloganin 7-hydroxylase activity","secondary_identifiers":["EC:1.14.14.85","MetaCyc:1.14.13.74-RXN"],"termid":"GO:0050595"}


id: SO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoded within a transposable element. For example gag, int, env and pol are the transposable element genes of the TY element in yeast.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_gene","synonyms":[{"name":"transposable element gene","type":"exact"}],"termid":"SO:0000111"}


id: PBO:0073428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 3","termid":"PBO:0073428"}


id: PBO:0087563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of spindle-assembly checkpoint complex; involved in delaying anaphase onset in cells with defects in mitotic spindle assembly; pseudosubstrate inhibitor of APC(Cdc20), the anaphase promoting complex involved in securin (Pds1p) turnover; MAD3 has a paralog, BUB1, that arose from the whole genome duplication","termid":"PBO:0087563"}


id: GO:1904402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nocodazole stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:17822405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nocodazole","termid":"GO:1904402"}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: PBO:0040551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4","termid":"PBO:0040551"}


id: PBO:0067902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 204","termid":"PBO:0067902"}


id: FYECO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which AP20187 was added to the medium or assay buffer.","definition_xrefs":["CHEBI:136847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AP20187","termid":"FYECO:0000335"}


id: PBO:0038918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 2","termid":"PBO:0038918"}


id: PR:C6Y4C8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma21 gene.","definition_xrefs":["UniProtKB:C6Y4C8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vma21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.16","synonyms":[{"name":"Spom972h-vma21","type":"exact"}],"termid":"PR:C6Y4C8"}


id: GO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PSII associated light-harvesting complex II.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II binding","termid":"GO:0062066"}


id: PBO:0072831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 1","termid":"PBO:0072831"}


id: PBO:0081189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 2","termid":"PBO:0081189"}


id: PBO:0041714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 5","termid":"PBO:0041714"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: PBO:0027008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_ascospore_wall","termid":"PBO:0027008"}


id: PBO:0083542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YRF1-4/YLR466W","termid":"PBO:0083542"}


id: PBO:0069872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1159, pseudogene","termid":"PBO:0069872"}


id: FYPO:0001691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing paraquat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on paraquat","synonyms":[{"name":"normal cell population growth in presence of paraquat","type":"exact"},{"name":"normal cell population growth on paraquat","type":"exact"},{"name":"normal cellular response to paraquat","type":"related"},{"name":"normal vegetative cell population growth on paraquat","type":"exact"}],"termid":"FYPO:0001691"}


id: GO:0035385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a SLIT protein binding to a Roundabout (ROBO) family receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Roundabout signaling pathway","synonyms":[{"name":"ROBO signaling pathway","type":"exact"},{"name":"ROBO/SLIT signaling pathway","type":"exact"},{"name":"Roundabout signalling pathway","type":"exact"}],"termid":"GO:0035385"}


id: PBO:0005026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosome biogenesis (predicted)","termid":"PBO:0005026"}


id: GO:2001172
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92718],"is_not":false,"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of glycolytic fermentation to ethanol","termid":"GO:2001154"},{"relation_name":"positively_regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"positive regulation of glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ethanol fermentation","type":"exact"},{"name":"positive regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001172","terms_by_termid":{"GO:2001172":null}}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: PBO:0080324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: PBO:0080204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin, adherens junctions transmembrane protein","termid":"PBO:0080204"}


id: GO:0006101
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95592],"is_not":false,"summary":null,"term":"GO:0006101"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"citrate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrate metabolism","type":"exact"}],"termid":"GO:0006101","terms_by_termid":{"GO:0006101":null}}


id: GO:0050546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)pyruvate + H+ = (4-hydroxyphenyl)acetaldehyde + CO2.","definition_xrefs":["EC:4.1.1.80","RHEA:18697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyphenylpyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03341","MetaCyc:4.1.1.80-RXN"],"synonyms":[{"name":"4-hydroxyphenylpyruvate carboxy-lyase (4-hydroxyphenylacetaldehyde-forming)","type":"related"},{"name":"4-hydroxyphenylpyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0050546"}


id: GO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfate assimilation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter (obsolete GO:0100053)","termid":"GO:0100053"}


id: PATO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000807 proprioreception value (obsolete PATO:0000807)","termid":"PATO:0000807"}


id: GO:0002824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.","definition_xrefs":["GOC:mtg_sensu","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response","termid":"GO:0002821"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"positively_regulates","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"}


id: GO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acyl-D-amino acid = D-amino acid + an acid.","definition_xrefs":["MetaCyc:3.5.1.81-RXN","EC:3.5.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-acyl-D-amino-acid deacylase activity","secondary_identifiers":["RHEA:18309"],"synonyms":[{"name":"D-aminoacylase activity","type":"related"},{"name":"N-acyl-D-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0047420"}


id: PBO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 24","termid":"PBO:0080038"}


id: PBO:0069375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 635, pseudogene","termid":"PBO:0069375"}


id: GO:0046318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucosylceramide biosynthetic process","termid":"GO:0046317"},{"relation_name":"is_a","term_name":"negative regulation of ceramide biosynthetic process","termid":"GO:1900060"},{"relation_name":"negatively_regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"down regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"down-regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"downregulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"inhibition of glucosylceramide biosynthetic process","type":"narrow"},{"name":"negative regulation of glucosylceramide anabolism","type":"exact"},{"name":"negative regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"negative regulation of glucosylceramide formation","type":"exact"},{"name":"negative regulation of glucosylceramide synthesis","type":"exact"}],"termid":"GO:0046318"}


id: SO:0000543
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000543 alternately_spliced_gene_encoding_greater_than_one_transcript (obsolete SO:0000543)","termid":"SO:0000543"}


id: GO:0097564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:16607022","GOC:giardia","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right lateral basal body pair","termid":"GO:0097564"}


id: PBO:0085668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair (NER); homologous to RAD4","termid":"PBO:0085668"}


id: PBO:0070559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 25","termid":"PBO:0070559"}


id: GO:0048462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the carpel. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel formation","secondary_identifiers":["GO:0048431"],"termid":"GO:0048462"}


id: GO:0046917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 3-dephospho-CoA = 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA + adenine.","definition_xrefs":["EC:2.4.2.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"triphosphoribosyl-dephospho-CoA synthase activity","secondary_identifiers":["MetaCyc:2.7.8.25-RXN","RHEA:15117"],"synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3-dephospho-CoA synthase activity","type":"related"},{"name":"ATP:3-dephospho-CoA 5''-triphosphoribosyltransferase activity","type":"exact"},{"name":"ATP:dephospho-CoA 5-triphosphoribosyl transferase activity","type":"exact"},{"name":"CitG activity","type":"related"}],"termid":"GO:0046917"}


id: PBO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involucrin","termid":"PBO:0051969"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN","KEGG_REACTION:R00661"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: GO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase I transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription factor activity (obsolete GO:0003701)","synonyms":[{"name":"RNA polymerase I transcription factor activity","type":"exact"}],"termid":"GO:0003701"}


id: PBO:0030201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_mitotic_cell_cycle_arrest_in_interphase","termid":"PBO:0030201"}


id: PBO:0028352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_metaphase","termid":"PBO:0028352"}


id: PBO:0002809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer1 family protein (predicted)","termid":"PBO:0002809"}


id: GO:0032641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"lymphotoxin A production","secondary_identifiers":["GO:0042109"],"synonyms":[{"name":"LTA production","type":"exact"},{"name":"TNF-B production","type":"exact"},{"name":"TNF-beta production","type":"exact"},{"name":"lymphotoxin A biosynthetic process","type":"narrow"},{"name":"lymphotoxin A formation","type":"related"},{"name":"lymphotoxin A synthesis","type":"narrow"},{"name":"lymphotoxin-alpha production","type":"exact"},{"name":"tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032641"}


id: PBO:0058457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5186","termid":"PBO:0058457"}


id: PBO:0034282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_with","termid":"PBO:0034282"}


id: GO:1902922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(3-hydroxyvalerate).","definition_xrefs":["GOC:TermGenie","PMID:21705209","GOC:mengo_curators","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) metabolic process","termid":"GO:1902920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyvalerate) metabolic process","synonyms":[{"name":"poly(3-hydroxyvalerate) metabolism","type":"exact"}],"termid":"GO:1902922"}


id: GO:0034337
data:
  {"annotated_genes":["SJAG_00886","SJAG_00195","SJAG_04266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60428,109953],"is_not":false,"summary":null,"term":"GO:0034337"},{"annotations":[94624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061818"}]},"cv_name":"biological_process","definition":"The process of assisting in the covalent and noncovalent assembly of single or multimeric RNAs into the correct tertiary structure.","definition_xrefs":["GOC:mah","PMID:10393192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00886":null,"SJAG_04266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA folding","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA chaperone","type":"related"}],"termid":"GO:0034337","terms_by_termid":{"GO:0034337":null,"GO:0061818":null}}


id: GO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A3 adenosine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"A3 adenosine receptor binding","synonyms":[{"name":"A3 adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031689"}


id: PATO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a cup.","direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cup-shaped","synonyms":[{"name":"cup-like","type":"exact"}],"termid":"PATO:0002227"}


id: PBO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating cysteine peptidase Ulp2 (predicted)","termid":"PBO:0001168"}


id: PBO:0033787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_large-Y_replication_intermediates","termid":"PBO:0033787"}


id: PBO:0013122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS calcium ion channel protein Msy1","termid":"PBO:0013122"}


id: PBO:0077542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 254","termid":"PBO:0077542"}


id: PBO:0108965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1B","termid":"PBO:0108965"}


id: PBO:0071157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 22","termid":"PBO:0071157"}


id: PBO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-68 (pseudogene)","termid":"PBO:0051112"}


id: GO:0098680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the addition of a terminal nucleotide to an RNA molecule in the absence of a nucleic acid template.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:dos","PMID:15994230","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"template-free RNA nucleotidyltransferase","termid":"GO:0098680"}


id: PBO:0084260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein involved in protein sorting; component of ER-SURF, a pathway involved in retrieving mitochondrial membrane protein precursors and rerouting them to the mitochondrial translocation system; promotes the proteolytic degradation of non-productive mitochondrial precursor proteins suggesting involvement in quality control during protein import; GFP-fusion protein localizes to the ER; member of a conserved family of ER proteins including human homolog TMEM97","termid":"PBO:0084260"}


id: GO:0018078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The iodination of peptidyl-thyronine, formed from tyrosine.","definition_xrefs":["RESID:AA0177","RESID:AA0178"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-thyronine iodination (obsolete GO:0018078)","termid":"GO:0018078"}


id: GO:0021951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that guide a precerebellar neuron towards their signals, where this process is involved in tangential migration.","definition_xrefs":["GOC:dph","GOC:cls","PMID:15157725","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in precerebellar neuron migration","synonyms":[{"name":"positive chemotaxis involved in precerebellar neuron migration","type":"exact"}],"termid":"GO:0021951"}


id: GO:0030834
data:
  {"annotated_genes":["SJAG_00279","SJAG_01993","SJAG_02700","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88465,110441,95030,84452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin depolymerization","type":"exact"}],"termid":"GO:0030834","terms_by_termid":{"GO:0051016":null}}


id: PBO:0026733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_kinetochore","termid":"PBO:0026733"}


id: PBO:0085420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in efflux of fluconazole, diazaborine, benomyl, methotrexate, and other drugs; expression induced in cells treated with the mycotoxin patulin; relocalizes from nucleus to plasma membrane upon DNA replication stress","termid":"PBO:0085420"}


id: GO:0005922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction.","definition_xrefs":["PMID:11146276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"gap junction","termid":"GO:0005921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"connexin complex","secondary_identifiers":["NIF_Subcellular:sao445019788"],"synonyms":[{"name":"connexon","type":"exact"},{"name":"connexon complex","type":"related"}],"termid":"GO:0005922"}


id: PBO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_conjugation","termid":"PBO:0031398"}


id: PBO:0065608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 2","termid":"PBO:0065608"}


id: GO:0034736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + cholesterol = a cholesterol ester + CoA.","definition_xrefs":["EC:2.3.1.26","RHEA:17729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol O-acyltransferase activity","termid":"GO:0004772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"cholesterol O-acyltransferase activity","secondary_identifiers":["MetaCyc:STEROL-O-ACYLTRANSFERASE-RXN","Reactome:R-HSA-8876696","KEGG_REACTION:R01461"],"synonyms":[{"name":"ACAT activity","type":"broad"},{"name":"acyl coenzyme A-cholesterol-O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:cholesterol O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:cholesterol acyltransferase activity","type":"related"},{"name":"acylcoenzyme A:cholesterol O-acyltransferase activity","type":"exact"},{"name":"cholesterol acyltransferase activity","type":"broad"},{"name":"cholesterol ester synthetase activity","type":"related"},{"name":"cholesteryl ester synthetase activity","type":"related"}],"termid":"GO:0034736"}


id: PBO:0043861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cramped chromatin regulator homolog 1","termid":"PBO:0043861"}


id: FYPO:0002746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular valine level","synonyms":[{"name":"normal cellular L-valine level","type":"exact"},{"name":"normal cellular valine level during mitotic cell cycle","type":"related"},{"name":"normal cellular valine level during vegetative growth","type":"exact"},{"name":"normal level of valine in cell","type":"exact"}],"termid":"FYPO:0002746"}


id: PBO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-16 (pseudogene)","termid":"PBO:0051198"}


id: PBO:0068173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 480","termid":"PBO:0068173"}


id: PBO:0088586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytosine-mismatch binding protein 1, candidate TFAM ortholog","termid":"PBO:0088586"}


id: PBO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp10 (predicted)","termid":"PBO:0001868"}


id: GO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylation at centromere (obsolete GO:0031068)","synonyms":[{"name":"activation of histone deacetylation at centromere","type":"narrow"},{"name":"stimulation of histone deacetylation at centromere","type":"narrow"},{"name":"up regulation of histone deacetylation at centromere","type":"exact"},{"name":"up-regulation of histone deacetylation at centromere","type":"exact"},{"name":"upregulation of histone deacetylation at centromere","type":"exact"}],"termid":"GO:0031068"}


id: PBO:0050224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 2","termid":"PBO:0050224"}


id: PBO:0046430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B6","termid":"PBO:0046430"}


id: PBO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 3","termid":"PBO:0047342"}


id: PBO:0047152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member B, pseudogene","termid":"PBO:0047152"}


id: PBO:0042060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 122","termid":"PBO:0042060"}


id: GO:0032039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II.","definition_xrefs":["PMID:16239144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"integrator complex","termid":"GO:0032039"}


id: FYPO:0008180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the RNA polymerase II CTD domain is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II CTD binding","termid":"FYPO:0008180"}


id: MOD:00633
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-N-I-sulfonerahodamine","synonyms":[{"name":"Xlink:B10621","type":"related"},{"name":"bis-((N-iodoacetyl)piperazinyl)sulfonerhodamine","type":"exact"},{"name":"bis-N-I-sulfonerahodamine","type":"related"}],"termid":"MOD:00633"}


id: PBO:0090178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A","termid":"PBO:0090178"}


id: PBO:0042466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 3","termid":"PBO:0042466"}


id: GO:2000151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in cardiac muscle tissue morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in cardiac muscle tissue morphogenesis","termid":"GO:0061350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in cardiac muscle tissue morphogenesis","termid":"GO:2000151"}


id: PBO:0066492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 3","termid":"PBO:0066492"}


id: SO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region recognized by a recombinase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_signal_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_Signal_Sequences"],"synonyms":[{"name":"recombination signal sequence","type":"related"}],"termid":"SO:0001532"}


id: FYPO:0001839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at the same frequency as in wild-type cells. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal minichromosome loss","termid":"FYPO:0001839"}


id: PBO:0040150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH1L intronic transcript 1","termid":"PBO:0040150"}


id: GO:0090313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting to membrane","termid":"GO:0090313"}


id: PR:Q9UTC0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zym1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTC0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein zym1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.13","synonyms":[{"name":"Spom972h-zym1","type":"exact"}],"termid":"PR:Q9UTC0"}


id: PBO:0028370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GU_repeat_RNA_binding","termid":"PBO:0028370"}


id: PBO:0042875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 141","termid":"PBO:0042875"}


id: PBO:0034164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_active_participant","termid":"PBO:0034164"}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: FYPO:0001982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"},{"relation_name":"is_a","term_name":"decreased rate of DNA replication","termid":"FYPO:0001981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased rate of DNA replication during vegetative growth","synonyms":[{"name":"decreased rate of DNA replication during mitotic cell cycle","type":"related"},{"name":"reduced rate of DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001982"}


id: PBO:0090740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Oma1","termid":"PBO:0090740"}


id: GO:0033527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including glycine and succinyl-CoA.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0006790","GO:0033013","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:0033527"}


id: PBO:0084251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol 1,3,4,5,6-pentakisphosphate 2-kinase; nuclear protein required for synthesis of 1,2,3,4,5,6-hexakisphosphate (phytate), which is integral to cell function; has 2 motifs conserved in other fungi; ipk1 gle1 double mutant is inviable; human IPPK can complement ipk1 null mutant","termid":"PBO:0084251"}


id: FYPO:0002230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen curved vegetative cell","synonyms":[{"name":"inviable curved cell with increased cell size","type":"related"},{"name":"inviable curved cell with increased cell volume","type":"exact"},{"name":"inviable enlarged curved cell","type":"related"},{"name":"inviable large curved cell","type":"related"},{"name":"inviable swollen curved cell","type":"exact"},{"name":"inviable swollen curved cell during vegetative growth","type":"exact"},{"name":"inviable swollen curved inviable cell","type":"exact"},{"name":"inviable swollen curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen curved vegetative cell","type":"exact"}],"termid":"FYPO:0002230"}


id: PBO:0079790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A11, pseudogene","termid":"PBO:0079790"}


id: PBO:0084318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; a carrier protein involved in nuclear import of proteins; importin beta homolog","termid":"PBO:0084318"}


id: PBO:0060493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminic acid phosphatase","termid":"PBO:0060493"}


id: GO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ferric triacetylfusarinine C into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0098771","GO:0006810"],"is_obsolete":false,"name":"ferric triacetylfusarinine C import into cell","synonyms":[{"name":"ferric triacetylfusarinine C transport","type":"broad"}],"termid":"GO:0015686"}


id: PBO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 Cyb502","termid":"PBO:0090420"}


id: PATO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000924 relative enzyme function (obsolete PATO:0000924)","termid":"PATO:0000924"}


id: GO:0005085
data:
  {"annotated_genes":["SJAG_02819","SJAG_01309","SJAG_04491","SJAG_00858","SJAG_02529","SJAG_02368","SJAG_05210","SJAG_02160","SJAG_02645","SJAG_03705","SJAG_01576","SJAG_00064","SJAG_03142","SJAG_02307","SJAG_05023","SJAG_00807","SJAG_04837","SJAG_01030","SJAG_03600","SJAG_06588","SJAG_01699","SJAG_03488","SJAG_00514","SJAG_00216","SJAG_02486","SJAG_03704","SJAG_04771","SJAG_03581","SJAG_02004","SJAG_03678","SJAG_01659","SJAG_03246","SJAG_04982","SJAG_02248","SJAG_04653","SJAG_01025","SJAG_02833","SJAG_03089","SJAG_04010","SJAG_04615","SJAG_00143","SJAG_02471","SJAG_02027","SJAG_04464","SJAG_02493","SJAG_01415","SJAG_03002","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73771,74870,83709,84253,86048,87347,87625,88263,88911,90010,90195,90467,90729,91140,92201,92464,92810,93461,93870,93908,93957,94115,94592,95244,95961,95962,96628,96629,101241,102523,103113,104078,104433,105226,106138,106243,106802,106914,107138,110062,110106,110107,110743,110845,110924,111646,111921,112624,113986,114000],"is_not":false,"summary":null,"term":"GO:0005085"}]},"cv_name":"molecular_function","definition":"Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions.","definition_xrefs":["PMID:27218782","GOC:mah","GOC:kd","PMID:23303910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase regulator 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exchange factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2029451","GO:0016219","Reactome:R-HSA-1250463","Reactome:R-HSA-2424477","GO:0019839","Reactome:R-HSA-379044","GO:0017034","Reactome:R-HSA-392870","Reactome:R-HSA-418579","Reactome:R-HSA-6811418","Reactome:R-HSA-9013435","Reactome:R-HSA-8851877","Reactome:R-HSA-2029467","Reactome:R-HSA-203977","Reactome:R-HSA-5637806","Reactome:R-HSA-9018747","Reactome:R-HSA-5654413","GO:0005088","Reactome:R-HSA-9032798","Reactome:R-HSA-9665009","Reactome:R-HSA-9666430","Reactome:R-HSA-169904","Reactome:R-HSA-2179407","Reactome:R-HSA-379048","Reactome:R-HSA-428750","Reactome:R-HSA-2424476","Reactome:R-HSA-5218829","Reactome:R-HSA-5654392","Reactome:R-HSA-445064","Reactome:R-HSA-5672965","Reactome:R-HSA-749453","Reactome:R-HSA-8982637","Reactome:R-HSA-3928651","Reactome:R-HSA-114544","Reactome:R-HSA-9624845","Reactome:R-HSA-8876837","Reactome:R-HSA-1433415","Reactome:R-HSA-9640167","Reactome:R-HSA-9013023","Reactome:R-HSA-350769","Reactome:R-HSA-5218839","GO:0016220","Reactome:R-HSA-389350","Reactome:R-HSA-8876191","Reactome:R-HSA-419166","Reactome:R-HSA-8877451","Reactome:R-HSA-9033292","Reactome:R-HSA-8876190","Reactome:R-HSA-442732","Reactome:R-HSA-9664991","Reactome:R-HSA-8851899","GO:0005086","Reactome:R-HSA-187746","Reactome:R-HSA-428535","GO:0008321","Reactome:R-HSA-194518","Reactome:R-HSA-210977","Reactome:R-HSA-392195","Reactome:R-HSA-399995","Reactome:R-HSA-5655347","Reactome:R-HSA-8876188","Reactome:R-HSA-751029","Reactome:R-HSA-8875318","Reactome:R-HSA-8876193","Reactome:R-HSA-8877308","Reactome:R-HSA-9013143","Reactome:R-HSA-9018804","GO:0030676","Reactome:R-HSA-2730840","Reactome:R-HSA-380073","Reactome:R-HSA-1225957","Reactome:R-HSA-442291","Reactome:R-HSA-825631","Reactome:R-HSA-418856","Reactome:R-HSA-418850","Reactome:R-HSA-8850041","Reactome:R-HSA-8877612","Reactome:R-HSA-9026891","Reactome:R-HSA-9032067","Reactome:R-HSA-9639286","Reactome:R-HSA-9672163","Reactome:R-HSA-9693111","Reactome:R-HSA-9703441","Reactome:R-HSA-3928642","Reactome:R-HSA-5637808","Reactome:R-HSA-5654618","Reactome:R-HSA-9014433","Reactome:R-HSA-9029158","Reactome:R-HSA-205039","Reactome:R-HSA-3928628","Reactome:R-HSA-9670436","Reactome:R-HSA-420883","Reactome:R-HSA-109807","Reactome:R-HSA-9634418","Reactome:R-HSA-1250383","Reactome:R-HSA-9665404","Reactome:R-HSA-3928632","Reactome:R-HSA-9665408","GO:0005087","GO:0008433","Reactome:R-HSA-171026","Reactome:R-HSA-2485180","Reactome:R-HSA-156913","Reactome:R-HSA-177938","Reactome:R-HSA-5686318","Reactome:R-HSA-8980691","Reactome:R-HSA-5686071","Reactome:R-HSA-186834","Reactome:R-HSA-9680385","Reactome:R-HSA-5623508","Reactome:R-HSA-9695853","Reactome:R-HSA-9036301","Reactome:R-HSA-9619803","Reactome:R-HSA-5654426","Reactome:R-HSA-6807868","Reactome:R-HSA-9018768","Reactome:R-HSA-8877998","Reactome:R-HSA-442273","Reactome:R-HSA-8876454","Reactome:R-HSA-8875320","Reactome:R-HSA-8877311","Reactome:R-HSA-2029445","Reactome:R-HSA-416588","Reactome:R-HSA-9607304","Reactome:R-HSA-8875591","Reactome:R-HSA-8877475","Reactome:R-HSA-1225951","Reactome:R-HSA-1250498","Reactome:R-HSA-3965444","Reactome:R-HSA-5617816","Reactome:R-HSA-3928612","Reactome:R-HSA-5654402","Reactome:R-HSA-5655277","Reactome:R-HSA-6811429","Reactome:R-HSA-170979","Reactome:R-HSA-8848618","Reactome:R-HSA-1168636","Reactome:R-HSA-8875568","Reactome:R-HSA-8876616","GO:0005089","Reactome:R-HSA-3928592","Reactome:R-HSA-8982640","Reactome:R-HSA-8876615","Reactome:R-HSA-9013109","Reactome:R-HSA-939265","Reactome:R-HSA-180687","Reactome:R-HSA-6811414","Reactome:R-HSA-5694409","Reactome:R-HSA-9014296","Reactome:R-HSA-9665700","Reactome:R-HSA-9666428","Reactome:R-HSA-9672170","Reactome:R-HSA-5623521","Reactome:R-HSA-8964604","GO:0017112","Reactome:R-HSA-177945","Reactome:R-HSA-399938","Reactome:R-HSA-428917","Reactome:R-HSA-1306972","Reactome:R-HSA-109817","Reactome:R-HSA-442314","Reactome:R-HSA-5654647","GO:0005090","Reactome:R-HSA-389348","GO:0017132","Reactome:R-HSA-392054","Reactome:R-HSA-4093336","Reactome:R-HSA-416530","Reactome:R-HSA-5654600","Reactome:R-HSA-1433471","Reactome:R-HSA-5655241","Reactome:R-HSA-8851827","Reactome:R-HSA-8877760","Reactome:R-HSA-8877813","Reactome:R-HSA-9013159","Reactome:R-HSA-9017491","Reactome:R-HSA-9018825","Reactome:R-HSA-9660824","Reactome:R-HSA-9665707","Reactome:R-HSA-9751201","Reactome:R-HSA-3928633","Reactome:R-HSA-5218850","Reactome:R-HSA-354173","Reactome:R-HSA-5654663","Reactome:R-HSA-5655326","Reactome:R-HSA-9018817"],"synonyms":[{"name":"ARF guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"GDP-dissociation stimulator activity","type":"exact"},{"name":"GDS","type":"exact"},{"name":"GEF","type":"exact"},{"name":"GNRP","type":"narrow"},{"name":"Rab guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rac guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ral guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ran guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rap guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ras guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rho guanine nucleotide exchange factor","type":"exact"},{"name":"Rho guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"RhoGEF","type":"exact"},{"name":"Sar guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"cAMP-dependent guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"guanyl-nucleotide release factor activity","type":"exact"},{"name":"guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:0005085","terms_by_termid":{"GO:0005085":null}}


id: FYPO:0006244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation does not occur over short (less than 90 kb) ranges within a chromosome arm.","definition_xrefs":["PMID:28825727","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished short range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006244)","termid":"FYPO:0006244"}


id: PBO:0054709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2118","termid":"PBO:0054709"}


id: PBO:0012003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GAG acceptor","termid":"PBO:0012003"}


id: PBO:0004651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Sar1","termid":"PBO:0004651"}


id: PBO:0040431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting beta","termid":"PBO:0040431"}


id: GO:0051386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the neurotrophin TRK receptor signaling pathway.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"neurotrophin TRK receptor signaling pathway","termid":"GO:0048011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of neurotrophin TRK receptor signaling pathway","synonyms":[{"name":"regulation of NGF receptor signaling pathway","type":"exact"},{"name":"regulation of NGF receptor signalling pathway","type":"exact"},{"name":"regulation of nerve growth factor receptor signaling pathway","type":"related"},{"name":"regulation of nerve growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0051386"}


id: GO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coagulation, the process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coagulation","synonyms":[{"name":"regulation of clotting","type":"exact"}],"termid":"GO:0050818"}


id: PBO:0065279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C","termid":"PBO:0065279"}


id: GO:1905517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a macrophage from one site to another.","definition_xrefs":["PMID:25749876","GO_REF:0000091","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage migration","termid":"GO:1905517"}


id: GO:0016812
data:
  {"annotated_genes":["SJAG_00964","SJAG_04300","SJAG_00444","SJAG_00412","SJAG_01995"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017168"},{"annotations":[89565,102637,85627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004151"},{"annotations":[112494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00444":null,"SJAG_00964":null,"SJAG_01995":null,"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70906","EC:3.5.2.-"],"termid":"GO:0016812","terms_by_termid":{"GO:0004151":null,"GO:0017168":null,"GO:0033971":null}}


id: PBO:0028222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_splicing","termid":"PBO:0028222"}


id: PBO:0041362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 3","termid":"PBO:0041362"}


id: PBO:0066304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 7","termid":"PBO:0066304"}


id: PBO:0030629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_sucrose_carbon_source","termid":"PBO:0030629"}


id: MOD:00112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-12-hydroxyfarnesyl-L-cysteine.","definition_xrefs":["Unimod:376","PubMed:17790543","RESID:AA0103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated cysteine","termid":"MOD:01110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-12-hydroxyfarnesyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E,6E,10Z)-12-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(12-hydroxy-3,7,11-trimethyl-3,6,10-dodecatrienylthio)propanoic acid","type":"exact"},{"name":"Hydroxyfarnesyl","type":"related"},{"name":"LIPID S-12-hydroxyfarnesyl cysteine","type":"exact"},{"name":"S-12-hydroxyfarnesyl-L-cysteine","type":"exact"},{"name":"S12HyFarnCys","type":"exact"},{"name":"hydroxyfarnesyl","type":"related"}],"termid":"MOD:00112"}


id: GO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body contributing to an inflammatory response.","definition_xrefs":["PMID:14680625","PMID:14708592","PMID:7507411","PMID:8600538","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in inflammatory response","synonyms":[{"name":"immune cell migration during inflammatory response","type":"related"},{"name":"immune cell trafficking during inflammatory response","type":"related"},{"name":"leucocyte migration during inflammatory response","type":"related"},{"name":"leucocyte trafficking during inflammatory response","type":"related"},{"name":"leukocyte migration during inflammatory response","type":"related"},{"name":"leukocyte trafficking during inflammatory response","type":"related"}],"termid":"GO:0002523"}


id: PBO:0057049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 136","termid":"PBO:0057049"}


id: PBO:0055852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 2","termid":"PBO:0055852"}


id: PBO:0089770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 serine/threonine protein kinase Tor2","termid":"PBO:0089770"}


id: FYPO:0005242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on glutamine nitrogen source","synonyms":[{"name":"decreased growth on glutamine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on glutamine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with glutamine nitrogen source","type":"narrow"},{"name":"reduced cell growth on glutamine nitrogen source","type":"exact"},{"name":"slow cell growth on glutamine nitrogen source","type":"narrow"}],"termid":"FYPO:0005242"}


id: PBO:0053719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 929","termid":"PBO:0053719"}


id: GO:0035520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the ubiquitin group from a monoubiquitinated protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"monoubiquitinated protein deubiquitination","synonyms":[{"name":"monoubiquitinated protein deubiquitinylation","type":"exact"},{"name":"monoubiquitinated protein deubiquitylation","type":"exact"}],"termid":"GO:0035520"}


id: GO:0008253
data:
  {"annotated_genes":["SJAG_01055","SJAG_02582","SJAG_03096","SJAG_02580","SJAG_02593","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83776,83777,86712,90503,109834,109835],"is_not":false,"summary":null,"term":"GO:0008253"},{"annotations":[113280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050484"},{"annotations":[104626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-109514","MetaCyc:5-NUCLEOTID-RXN","Reactome:R-HSA-109415","Reactome:R-HSA-74248","Reactome:R-HSA-8940074","Reactome:R-HSA-109380","Reactome:R-HSA-9755078","Reactome:R-HSA-109470","Reactome:R-HSA-109278","Reactome:R-HSA-109480","Reactome:R-HSA-109291","Reactome:R-HSA-8940070","Reactome:R-HSA-109449","RHEA:12484","Reactome:R-HSA-109387","Reactome:R-HSA-5694126"],"synonyms":[{"name":"5' nucleotidase activity","type":"exact"},{"name":"5'-AMP nucleotidase","type":"narrow"},{"name":"5'-AMPase","type":"narrow"},{"name":"5'-adenylic phosphatase","type":"narrow"},{"name":"5'-mononucleotidase activity","type":"related"},{"name":"5'-ribonucleotide phosphohydrolase activity","type":"related"},{"name":"AMP phosphatase","type":"narrow"},{"name":"AMP phosphohydrolase","type":"narrow"},{"name":"AMPase","type":"narrow"},{"name":"UMPase","type":"narrow"},{"name":"adenosine 5'-phosphatase","type":"narrow"},{"name":"adenosine monophosphatase","type":"narrow"},{"name":"snake venom 5'-nucleotidase","type":"narrow"},{"name":"thimidine monophosphate nucleotidase","type":"narrow"},{"name":"uridine 5'-nucleotidase","type":"narrow"}],"termid":"GO:0008253","terms_by_termid":{"GO:0008253":null,"GO:0050483":null,"GO:0050484":null}}


id: PBO:0005456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Hst2","termid":"PBO:0005456"}


id: PR:P0CT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-7 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D1.01c","synonyms":[{"name":"Spom972h-Tf2-7","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT42"}


id: PBO:0034623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow","termid":"PBO:0034623"}


id: MOD:00386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue to form L-lysine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0381","PubMed:10504696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,5-diaminopentyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,5-diaminopentanyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"Anemonia majano fluorescent protein FP486 chromophore","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Lys-Gly)","type":"exact"},{"name":"L-lysine 5-imidazolinone glycine","type":"exact"},{"name":"[2-(1,5-diaminopentanyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"lysyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00386"}


id: PBO:0044776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 59","termid":"PBO:0044776"}


id: PBO:0034156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_protein_structural_homology_relationship_with","termid":"PBO:0034156"}


id: PBO:0069936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1229, pseudogene","termid":"PBO:0069936"}


id: PBO:0046268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 7","termid":"PBO:0046268"}


id: GO:0061619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannose into pyruvate, occurring through a fructose-6-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["ISBN:0201090910","ISBN:0879010479","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose catabolic process","termid":"GO:0019309"},{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0055086","GO:0006091"],"is_obsolete":false,"name":"glycolytic process from mannose through fructose-6-phosphate","termid":"GO:0061619"}


id: PBO:0070691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8","termid":"PBO:0070691"}


id: PBO:0091904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf6 (frameshifted)","termid":"PBO:0091904"}


id: PBO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.2","termid":"PBO:0000530"}


id: PBO:0068910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 153, pseudogene","termid":"PBO:0068910"}


id: PBO:0085742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in translation inhibition and nonsense-mediated decay; interacts with cap binding protein Cdc33p and with Nam7p; localizes to P-bodies upon glucose starvation; mRNA abundance regulated by mRNA decay factors; EBS1 has a paralog, EST1, that arose from the whole genome duplication","termid":"PBO:0085742"}


id: GO:0060930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to sinoatrial (SA) node cell fates and their capacity to differentiate into SA node cells. SA node cells are pacemaker cells that are found in the sinoatrial node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell fate commitment","termid":"GO:0060927"},{"relation_name":"part_of","term_name":"sinoatrial node cell differentiation","termid":"GO:0060921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial node cell fate commitment","synonyms":[{"name":"SA node cell commitment","type":"exact"},{"name":"SAN cell commitment","type":"exact"},{"name":"sinus node cell commitment","type":"narrow"}],"termid":"GO:0060930"}


id: PBO:0071339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 3","termid":"PBO:0071339"}


id: PBO:0067852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 154","termid":"PBO:0067852"}


id: GO:0042665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into an ectoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"regulates","term_name":"ectodermal cell fate specification","termid":"GO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ectodermal cell fate specification","synonyms":[{"name":"regulation of ectoderm cell fate specification","type":"exact"}],"termid":"GO:0042665"}


id: PBO:0059754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 28","termid":"PBO:0059754"}


id: PBO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4 (predicted)","termid":"PBO:0001567"}


id: GO:0005754
data:
  {"annotated_genes":["SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85307],"is_not":false,"summary":null,"term":"GO:0005754"}]},"cv_name":"cellular_component","definition":"The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, catalytic core","termid":"GO:0045267"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)","termid":"GO:0000275"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase, catalytic core","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005754","terms_by_termid":{"GO:0005754":null}}


id: GO:0035501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MH1 (MAD homology 1) protein domain. The MH1 domain is found at the amino terminus of MAD related proteins such as Smads and can mediate DNA binding in some proteins. Smads also use the MH1 domain to interact with some transcription factors.","definition_xrefs":["Pfam:PF03165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MH1 domain binding","synonyms":[{"name":"MAD homology 1 domain binding","type":"exact"}],"termid":"GO:0035501"}


id: FYPO:0006670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a haploid cell undergoes meiotic cell cycle.","definition_xrefs":["PMID:31278118","PomBase:mah","PMID:9755190","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"meiotic cell cycle entry in haploid cell","synonyms":[{"name":"haploid meiosis","type":"narrow"},{"name":"meiosis in haploid cell","type":"related"}],"termid":"FYPO:0006670"}


id: GO:0062040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix lying external to fungal cells. The fungal biofilm matrix consists of polysaccharides, proteins, lipids, and nucleic acids. Fungal biofilms mediate adherence to host tissues, and provide protection from host immune defenses.","definition_xrefs":["PMID:27129222","PMID:28516088","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm matrix","termid":"GO:0062039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fungal biofilm matrix","termid":"GO:0062040"}


id: PBO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 17","termid":"PBO:0070885"}


id: GO:0008559
data:
  {"annotated_genes":["SJAG_05213","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92219,114042],"is_not":false,"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out).","definition_xrefs":["EC:7.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03363":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type xenobiotic transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.3.44-RXN","Reactome:R-HSA-9757139","GO:0008560","GO:0005226"],"synonyms":[{"name":"ATP phosphohydrolase (xenobiotic-exporting)","type":"related"},{"name":"ATP-dependent xenobiotic transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled xenobiotic transmembrane transporter activity","type":"related"},{"name":"MDR protein","type":"related"},{"name":"P-glycoprotein","type":"related"},{"name":"PDR protein","type":"related"},{"name":"multidrug resistance exporter","type":"related"},{"name":"multidrug-resistance protein","type":"related"},{"name":"pleiotropic-drug-resistance protein","type":"related"},{"name":"xenobiotic ABC transporter","type":"narrow"},{"name":"xenobiotic transmembrane transporting ATPase activity","type":"exact"}],"termid":"GO:0008559","terms_by_termid":{"GO:0008559":null}}


id: PBO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 3","termid":"PBO:0060338"}


id: GO:0009203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside triphosphate catabolic process","synonyms":[{"name":"ribonucleoside triphosphate breakdown","type":"exact"},{"name":"ribonucleoside triphosphate catabolism","type":"exact"},{"name":"ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009203"}


id: FYPO:0005854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin cables is increased.","definition_xrefs":["PMID:12764130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"increased actin cable assembly","synonyms":[{"name":"actin bundling increased","type":"related"},{"name":"increased actin bundling","type":"related"},{"name":"increased actin cable assembly during mitotic cell cycle","type":"related"},{"name":"increased actin cable assembly during vegetative growth","type":"exact"},{"name":"increased formin-nucleated actin cable assembly","type":"exact"}],"termid":"FYPO:0005854"}


id: PBO:0084279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the endoplasmic reticulum; required for normal content of cell wall beta-1,6-glucan","termid":"PBO:0084279"}


id: GO:0044070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of anions, atoms or small molecules with a net negative charge into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic anion transport","synonyms":[{"name":"regulation of anion transport","type":"broad"}],"termid":"GO:0044070"}


id: GO:1901616
data:
  {"annotated_genes":["SJAG_04192","SJAG_04048","SJAG_03786","SJAG_03804","SJAG_04954","SJAG_00237","SJAG_04870","SJAG_00244","SJAG_04320"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[96991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[112475,89196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[84906,111163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[107890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[96135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[101155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_03786":null,"SJAG_03804":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic hydroxy compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organic hydroxy compound breakdown","type":"exact"},{"name":"organic hydroxy compound catabolism","type":"exact"},{"name":"organic hydroxy compound degradation","type":"exact"}],"termid":"GO:1901616","terms_by_termid":{"GO:0006062":null,"GO:0006068":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null,"GO:1903457":null}}


id: GO:1905580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERBB3 signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:27353365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ERBB signaling pathway","termid":"GO:1901186"},{"relation_name":"is_a","term_name":"regulation of ERBB3 signaling pathway","termid":"GO:1905578"},{"relation_name":"positively_regulates","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERBB3 signaling pathway","synonyms":[{"name":"activation of ERBB3 signaling pathway","type":"narrow"},{"name":"activation of ERBB3 signalling pathway","type":"narrow"},{"name":"activation of HER3 signaling pathway","type":"narrow"},{"name":"activation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"narrow"},{"name":"positive regulation of ERBB3 signalling pathway","type":"exact"},{"name":"positive regulation of HER3 signaling pathway","type":"exact"},{"name":"positive regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"},{"name":"up regulation of ERBB3 signaling pathway","type":"exact"},{"name":"up regulation of ERBB3 signalling pathway","type":"exact"},{"name":"up regulation of HER3 signaling pathway","type":"exact"},{"name":"up regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"},{"name":"up-regulation of ERBB3 signaling pathway","type":"exact"},{"name":"up-regulation of ERBB3 signalling pathway","type":"exact"},{"name":"up-regulation of HER3 signaling pathway","type":"exact"},{"name":"up-regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"},{"name":"upregulation of ERBB3 signaling pathway","type":"exact"},{"name":"upregulation of ERBB3 signalling pathway","type":"exact"},{"name":"upregulation of HER3 signaling pathway","type":"exact"},{"name":"upregulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:1905580"}


id: PBO:0056692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 4","termid":"PBO:0056692"}


id: PBO:0088541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Tvp23","termid":"PBO:0088541"}


id: PBO:0063874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class F","termid":"PBO:0063874"}


id: GO:0035599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) of the beta-carbon of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid.","definition_xrefs":["PMID:8844851","RESID:AA0232","PMID:18252828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"aspartic acid methylthiotransferase activity","termid":"GO:0035599"}


id: GO:2000982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mechanoreceptor differentiation","termid":"GO:0045633"},{"relation_name":"is_a","term_name":"regulation of inner ear receptor cell differentiation","termid":"GO:2000980"},{"relation_name":"positively_regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inner ear receptor cell differentiation","synonyms":[{"name":"positive regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000982"}


id: GO:0099170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}


id: GO:2000023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral root development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic root development","termid":"GO:2000069"},{"relation_name":"regulates","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral root development","termid":"GO:2000023"}


id: PBO:0045033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 intronic transcript 1","termid":"PBO:0045033"}


id: PBO:0054558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1960","termid":"PBO:0054558"}


id: PBO:0077748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll interacting protein","termid":"PBO:0077748"}


id: GO:0106158
data:
  {"annotated_genes":["SJAG_03154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108108],"is_not":false,"summary":null,"term":"GO:0106158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction:acyl-CoA + glycerophosphocholine = CoA + 1-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:27758859","RHEA:58476","PMID:18430972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"glycero-3-phosphocholine acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPACT activity","type":"exact"},{"name":"glycerophosphocholine O-acyltransferase activity","type":"exact"}],"termid":"GO:0106158","terms_by_termid":{"GO:0106158":null}}


id: GO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, and of BZ-Arg-OET > Ac-Tyr-OET. Does not hydrolyze peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cerevisin activity (obsolete GO:0004262)","synonyms":[{"name":"baker's yeast proteinase B","type":"related"},{"name":"brewer's yeast proteinase","type":"narrow"},{"name":"cerevisin activity","type":"exact"},{"name":"peptidase beta","type":"related"},{"name":"proteinase yscB activity","type":"narrow"},{"name":"yeast proteinase B activity","type":"narrow"}],"termid":"GO:0004262"}


id: GO:0047140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + CoA = reduced glutathione + CoA-glutathione.","definition_xrefs":["EC:1.8.4.3","MetaCyc:1.8.4.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutathione-CoA-glutathione transhydrogenase activity","secondary_identifiers":["RHEA:13125"],"synonyms":[{"name":"CoA:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:oxidized-glutathione oxidoreductase activity","type":"related"},{"name":"glutathione coenzyme A-glutathione transhydrogenase activity","type":"related"},{"name":"glutathione-coenzyme A glutathione disulfide transhydrogenase activity","type":"related"},{"name":"glutathione:coenzyme A-glutathione transhydrogenase activity","type":"related"}],"termid":"GO:0047140"}


id: PBO:0056901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER family member 3","termid":"PBO:0056901"}


id: PBO:0045634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 46 (pseudogene)","termid":"PBO:0045634"}


id: GO:0034186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to apolipoprotein A-I.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apolipoprotein binding","termid":"GO:0034185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein A-I binding","termid":"GO:0034186"}


id: PBO:0067324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 415, pseudogene","termid":"PBO:0067324"}


id: PBO:0062519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 5","termid":"PBO:0062519"}


id: FYPO:0006484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin dsDNA (leading strand) loading does not occur during the mitotic cell cycle. Cohesin dsDNA (leading strand) loading is the topological linking of a cohesin ring complex to double-stranded DNA of the leading strand in chromatin.","definition_xrefs":["GO:0062021","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic cohesin loading","termid":"FYPO:0005556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished mitotic cohesin dsDNA (leading strand) loading","synonyms":[{"name":"abolished cohesin dsDNA (leading strand) loading during mitotic cell cycle","type":"exact"},{"name":"abolished cohesin dsDNA (leading strand) loading during vegetative growth","type":"exact"},{"name":"abolished mitotic cohesin association with dsDNA (leading strand) chromatin","type":"exact"},{"name":"abolished mitotic cohesin localization to dsDNA (leading strand) chromatin","type":"exact"},{"name":"mitotic cohesin dsDNA (leading strand) loading abolished","type":"exact"}],"termid":"FYPO:0006484"}


id: GO:1901701
data:
  {"annotated_genes":["SJAG_02444","SJAG_01216","SJAG_03303","SJAG_05256","SJAG_05181","SJAG_00574","SJAG_03081","SJAG_01754","SJAG_02010","SJAG_04632","SJAG_01199","SJAG_04312","SJAG_04788","SJAG_04823","SJAG_01254","SJAG_04026","SJAG_01457","SJAG_00668","SJAG_02515","SJAG_03653","SJAG_01734","SJAG_06611","SJAG_00472","SJAG_00141","SJAG_04403","SJAG_01162","SJAG_04953","SJAG_02960","SJAG_01699","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102012,102603,97972,102960,105645,111643,90372,105136,112684],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[108852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[101148,114370,113468,91339,104953,96124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[101151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[109626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[101330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[96125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[91683,99608],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[89268,67626,64562,57912,85579,106261,96285,106216,85166,95404],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901701","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0034614":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during_which_ends","termid":"PBO:0017474"}


id: PBO:0056895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midnolin","termid":"PBO:0056895"}


id: GO:0048040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + UDP-alpha-D-glucuronate = CO2 + UDP-alpha-D-xylose.","definition_xrefs":["RHEA:23916","EC:4.1.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"UDP-glucuronate decarboxylase activity","secondary_identifiers":["MetaCyc:UDP-GLUCURONATE-DECARBOXYLASE-RXN","KEGG_REACTION:R01384"],"synonyms":[{"name":"UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)","type":"related"},{"name":"UDP-D-glucuronate carboxy-lyase activity","type":"related"},{"name":"UDP-glucuronic acid decarboxylase activity","type":"exact"},{"name":"UDPglucuronate decarboxylase activity","type":"related"},{"name":"uridine-diphosphoglucuronate decarboxylase activity","type":"related"}],"termid":"GO:0048040"}


id: GO:1901745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prephenate(2-).","definition_xrefs":["PMID:16752890","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"prephenate(2-) metabolic process","synonyms":[{"name":"prephenate metabolism","type":"exact"},{"name":"prephenate(2-) metabolism","type":"exact"}],"termid":"GO:1901745"}


id: GO:0048857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural nucleus development","termid":"GO:0048857"}


id: FYPO:0005172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased uracil import","synonyms":[{"name":"increased uracil import across plasma membrane","type":"exact"},{"name":"increased uracil import during mitotic cell cycle","type":"related"},{"name":"increased uracil import during vegetative growth","type":"exact"},{"name":"increased uracil import into cell","type":"exact"},{"name":"increased uracil uptake","type":"exact"}],"termid":"FYPO:0005172"}


id: PR:O94477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo52 gene.","definition_xrefs":["UniProtKB:O94477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.10c","synonyms":[{"name":"Spom972h-myo52","type":"exact"},{"name":"myosin type V-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94477"}


id: GO:0090696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development, taking place during the post-embryonic phase of a plant tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant organ development","termid":"GO:0090696"}


id: GO:0018353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin via S-phycocyanobilin-L-cysteine.","definition_xrefs":["RESID:AA0131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phycocyanobilin linkage","termid":"GO:0017009"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycocyanobilin linkage via S-phycocyanobilin-L-cysteine","secondary_identifiers":["GO:0018380"],"termid":"GO:0018353"}


id: PBO:0084393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) that is part of spliceosomal U6 snRNP and is also implicated in processing of pre-tRNA, pre-snoRNA, and pre-rRNA","termid":"PBO:0084393"}


id: GO:0086030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adrenergic receptor signaling pathway that contributes to a reduction in cardiac muscle contraction. Beta-adrenergic receptor-induced cardiac relaxation is achieved by a GPCR-activated adenylate cyclase generating cAMP; cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the sarcoplasmic reticulum (SR) membrane protein PLB. In its non-phosphorylated state, PLB acts as an inhibitor of the ATPase Ca(2+) pump of the cardiac SR (SERCA2a); inhibition of the pump is relieved upon phosphorylation. The pump removes Ca(2+) from the cytoplasm, thereby preventing cytosolic Ca(2+)-dependent activation of contractile proteins, leading to enhanced muscle relaxation.","definition_xrefs":["PMID:10571541","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0086023"},{"relation_name":"part_of","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation","synonyms":[{"name":"Gs-coupled adrenergic receptor signaling pathway involved in cardiac muscle relaxation","type":"exact"},{"name":"adrenergic receptor signaling pathway involved in cardiac muscle relaxation","type":"exact"},{"name":"adrenergic receptor signaling pathway involved in cardiac muscle relaxation via activation of AC","type":"related"},{"name":"adrenergic receptor-induced cardiac relaxation","type":"related"}],"termid":"GO:0086030"}


id: PBO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin","termid":"PBO:0060554"}


id: PBO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine","termid":"PBO:0000374"}


id: PATO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001223 quantitative value (obsolete PATO:0001223)","termid":"PATO:0001223"}


id: PBO:0047400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO38 divergent transcript","termid":"PBO:0047400"}


id: FYPO:0006419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad51 accumulates remain present for longer than normal during the meiotic cell cycle. Normally, Rad51 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Rad51 focus presence during meiotic cell cycle","synonyms":[{"name":"prolonged Rad51 focus presence during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006419"}


id: PBO:0067117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 162, pseudogene","termid":"PBO:0067117"}


id: GO:0010276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phytol + CTP = phytyl monophosphate + CDP + H+.","definition_xrefs":["RHEA:38055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"phytol kinase activity","secondary_identifiers":["EC:2.7.1.182","MetaCyc:RXN-7683"],"termid":"GO:0010276"}


id: FYPO:0000811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisome organization is abnormal. Peroxisome organization results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome.","definition_xrefs":["PomBase:mah","GO:0007031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal peroxisome organization","synonyms":[{"name":"abnormal peroxisome organisation","type":"exact"},{"name":"abnormal peroxisome organization during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000811"}


id: PBO:0073101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 5","termid":"PBO:0073101"}


id: GO:0015058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor-like module containing hormone receptor activity (obsolete GO:0015058)","synonyms":[{"name":"EGF-like module containing hormone receptor activity","type":"exact"},{"name":"Egr1 hormone receptor","type":"exact"},{"name":"epidermal growth factor-like module containing hormone receptor activity","type":"exact"}],"termid":"GO:0015058"}


id: CHEBI:17306
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose","termid":"CHEBI:17306"}


id: GO:0061664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Pup to a substrate protein via the reaction X-Pup + S = X + S-Pup, where X is either an E2 or E3 enzyme, the X-Pup linkage is a thioester bond, and the S-Pup linkage is an isopeptide bond between the C-terminal amino acid of Pup and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"},{"relation_name":"is_a","term_name":"Pup transferase activity","termid":"GO:0072496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0019787","GO:0140096","GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Pup ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061664"}


id: FYPO:0005884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing myxothiazol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on myxothiazol","synonyms":[{"name":"normal cell population growth in presence of myxothiazol","type":"exact"},{"name":"normal cell population growth on MXT","type":"exact"},{"name":"normal cell population growth on myxothiazol","type":"exact"},{"name":"normal vegetative cell population growth on myxothiazol","type":"exact"}],"termid":"FYPO:0005884"}


id: PBO:0039365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 1","termid":"PBO:0039365"}


id: GO:0019899
data:
  {"annotated_genes":["SJAG_04933","SJAG_02591","SJAG_04400","SJAG_03085","SJAG_03118","SJAG_01533","SJAG_00279","SJAG_04703","SJAG_01245","SJAG_00615","SJAG_01365","SJAG_01686","SJAG_01909","SJAG_00033","SJAG_00525","SJAG_01226","SJAG_01358","SJAG_04733","SJAG_03643","SJAG_02203","SJAG_02661","SJAG_03494","SJAG_01789","SJAG_00139","SJAG_00435","SJAG_04366","SJAG_01151","SJAG_00483","SJAG_01134","SJAG_02253","SJAG_04573","SJAG_02012","SJAG_00864","SJAG_02974","SJAG_04353","SJAG_03229","SJAG_00968","SJAG_03693","SJAG_03002","SJAG_03843","SJAG_01707","SJAG_00516","SJAG_01610","SJAG_03959","SJAG_03793","SJAG_04638","SJAG_00803","SJAG_01754","SJAG_00452","SJAG_01744","SJAG_00448","SJAG_02998","SJAG_06592","SJAG_02833","SJAG_03662","SJAG_02691","SJAG_00809","SJAG_04335","SJAG_02898","SJAG_03470","SJAG_03575","SJAG_01540","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008179"},{"annotations":[73058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051117"},{"annotations":[66817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035226"},{"annotations":[73210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051020"},{"annotations":[72057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019902"},{"annotations":[67913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[70067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"},{"annotations":[63110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019903"},{"annotations":[76601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070063"},{"annotations":[66477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043175"},{"annotations":[70597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[64364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[71519,76931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[75214,77604,71239,70003,77588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[77323,75488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[72742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"},{"annotations":[59842,60674,58577,70334,76458,77197,63855,65723,62507,64120,72970,67788,63276,63904,60846,70986,66652,72599,58832,74010,57159,61125,68001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031267"},{"annotations":[76497,73436,73270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031624"},{"annotations":[73894,69397,71686,75929,72354,74676,77942,78071,78320,70862,66272,78605,79292,77389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031625"},{"annotations":[74464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044389"}]},"cv_name":"molecular_function","definition":"Binding to an enzyme, a protein with catalytic activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein 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binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019899","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0001139":null,"GO:0008179":null,"GO:0019902":null,"GO:0019903":null,"GO:0031267":null,"GO:0031624":null,"GO:0031625":null,"GO:0034236":null,"GO:0035226":null,"GO:0043175":null,"GO:0043424":null,"GO:0044389":null,"GO:0051020":null,"GO:0051117":null,"GO:0070063":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:0102143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxynorspermidine + NADP + H2O = L-aspartic acid 4-semialdehyde betaine + trimethylenediaminium + NADPH + H+.","definition_xrefs":["EC:1.5.1.43","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carboxynorspermidine dehydrogenase I activity","secondary_identifiers":["MetaCyc:RXN-11565","RHEA:34115"],"termid":"GO:0102143"}


id: PR:Q9UTI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ethanolamine-phosphate cytidylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10739:SF14","PRO:DNx","OMA:SCHPO01554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.05c","secondary_identifiers":["UniProtKB:Q9UTI6"],"synonyms":[{"name":"CTP:phosphoethanolamine cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCYT2","type":"exact"},{"name":"phosphorylethanolamine transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI6"}


id: PBO:0089586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex beta subunit Mas1","termid":"PBO:0089586"}


id: PBO:0077191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia homeobox 2","termid":"PBO:0077191"}


id: PBO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3","termid":"PBO:0033815"}


id: GO:0018392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP + H+.","definition_xrefs":["RHEA:24444","EC:2.4.1.214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->3)-fucosyltransferase activity","termid":"GO:0046920"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"glycoprotein 3-alpha-L-fucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06015","MetaCyc:2.4.1.214-RXN"],"synonyms":[{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose:asparagine-linked N-acetylglucosamine alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of 4-N-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of N4-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fuc-alpha-1->6-GlcNAc)-Asn-peptide) alpha-1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6-GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"}],"termid":"GO:0018392"}


id: PBO:0089508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein Erv14","termid":"PBO:0089508"}


id: GO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of DNA or protein in chromatin by the non-covalent addition or removal of chemical groups.","definition_xrefs":["GOC:vw","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete non-covalent chromatin modification (obsolete GO:0016582)","termid":"GO:0016582"}


id: GO:0021950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that repel a precerebellar neuron as a component of the process of tangential migration.","definition_xrefs":["PMID:15157725","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in precerebellar neuron migration","synonyms":[{"name":"negative chemotaxis involved in precerebellar neuron migration","type":"exact"}],"termid":"GO:0021950"}


id: GO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a monocyte population by cell division.","definition_xrefs":["PMID:18467591","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte proliferation","termid":"GO:0061516"}


id: PBO:0060186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 5B, oligomeric mucus/gel-forming","termid":"PBO:0060186"}


id: PBO:0029223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trichostatin_A","termid":"PBO:0029223"}


id: GO:1990566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inward rectifier potassium channel complex expressed in cardiac muscle, specifically the sinoatrial node and atria, where it controls the heart rate, via regulation by G protein-coupled receptor signaling. In mammals it is composed of GIRK1 (or Kir3.1) and GIRK4 (or Kir3.4) subunits.","definition_xrefs":["GOC:ame","PMID:9765280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"I(KACh) inward rectifier potassium channel complex","synonyms":[{"name":"GIRK1-GIRK4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"Kir3.1-Kir3.4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"muscarinic potassium channel complex","type":"related"}],"termid":"GO:1990566"}


id: PR:O42947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16H5.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.12c","synonyms":[{"name":"Spom972h-SPBC16H5.12c","type":"exact"}],"termid":"PR:O42947"}


id: PBO:0091512
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although the specificity is different Imt1/A4GALT are in equivalent pathway postitions","termid":"PBO:0091512"}


id: FYPO:0002606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic S phase","termid":"FYPO:0004353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0002606"}


id: PBO:0068803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 40, pseudogene","termid":"PBO:0068803"}


id: GO:0198738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another, medaited by a wnt family protein ligand. This process includes wnt signal transduction in the receiving cell, release of wnt ligand from a secreting cell as well as any processes that actively facilitate wnt transport and presentation to receptor on the receiving cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling by wnt (obsolete GO:0198738)","termid":"GO:0198738"}


id: PBO:0057955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3678","termid":"PBO:0057955"}


id: PBO:0074040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A24 pseudogene 1","termid":"PBO:0074040"}


id: GO:0033356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-L-arabinose metabolic process","synonyms":[{"name":"UDP-L-arabinose metabolism","type":"exact"}],"termid":"GO:0033356"}


id: PBO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c","termid":"PBO:0015710"}


id: GO:2000914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of galactoglucomannan catabolic process","termid":"GO:2000912"},{"relation_name":"positively_regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of galactoglucomannan catabolic process","synonyms":[{"name":"positive regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000914"}


id: GO:0034182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained during a mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"}


id: PBO:0071635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 54","termid":"PBO:0071635"}


id: GO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation.","definition_xrefs":["CL:0000623","GOC:add","GOC:mtg_apoptosis","PMID:15728472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell apoptotic process","synonyms":[{"name":"NK cell apoptosis","type":"exact"},{"name":"natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070246"}


id: PBO:0054249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1632","termid":"PBO:0054249"}


id: GO:0008512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + H+(out) = sulfate(in) + H+(in).","definition_xrefs":["TC:2.A.53.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sulfate:proton symporter activity","secondary_identifiers":["RHEA:28574"],"synonyms":[{"name":"sulfate/hydrogen symporter activity","type":"exact"},{"name":"sulfate:hydrogen symporter activity","type":"exact"},{"name":"sulphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0008512"}


id: PBO:0065785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiescin sulfhydryl oxidase 1","termid":"PBO:0065785"}


id: PBO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBB receptor feedback inhibitor 1","termid":"PBO:0046532"}


id: PBO:0076990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 6","termid":"PBO:0076990"}


id: GO:1905719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the perinuclear region of the cytoplasm.","definition_xrefs":["PMID:15177031","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to perinuclear region of cytoplasm","synonyms":[{"name":"protein localisation in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localisation to perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization to perinuclear cytoplasm","type":"exact"}],"termid":"GO:1905719"}


id: GO:0042285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"xylosyltransferase activity","termid":"GO:0042285"}


id: PR:P78827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv5 gene.","definition_xrefs":["UniProtKB:P78827","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketol-acid reductoisomerase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.12","synonyms":[{"name":"Spom972h-ilv5","type":"exact"},{"name":"acetohydroxy-acid reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78827"}


id: PBO:0063408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 4","termid":"PBO:0063408"}


id: PBO:0081925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 965, pseudogene","termid":"PBO:0081925"}


id: SOFP:synonym
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Historic community symbol, may have originally been symbol","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonym","termid":"SOFP:synonym"}


id: GO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"}


id: GO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the rhamnose-binding lectin (RBL) family, a family of animal lectins that show specific binding activities to L-rhamnose or D-galactose.","definition_xrefs":["PMID:22312473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RBL family protein binding","synonyms":[{"name":"rhamnose-binding lectin family protein binding","type":"exact"}],"termid":"GO:0061675"}


id: PBO:0056168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal vascular addressin cell adhesion molecule 1","termid":"PBO:0056168"}


id: PBO:0039886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 3","termid":"PBO:0039886"}


id: FYPO:0003700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of snoRNA primary transcripts measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased snoRNA primary transcript level","synonyms":[{"name":"increased small nucleolar RNA primary transcript level","type":"exact"},{"name":"increased snoRNA primary transcript accumulation","type":"related"},{"name":"increased snoRNA primary transcript level during mitotic cell cycle","type":"related"},{"name":"increased snoRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased snoRNA transcript level","type":"broad"}],"termid":"FYPO:0003700"}


id: PBO:0079132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSKU antisense RNA 1","termid":"PBO:0079132"}


id: PBO:0034648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_SUMO_chain_length","termid":"PBO:0034648"}


id: PBO:0085523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25A has a paralog, RPS25B, that arose from the whole genome duplication","termid":"PBO:0085523"}


id: GO:0019669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006091","GO:0006520"],"is_obsolete":false,"name":"anaerobic glycine catabolic process","synonyms":[{"name":"glycine fermentation","type":"exact"}],"termid":"GO:0019669"}


id: GO:0010028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cyclic series of interconversions involving three xanthophylls, violoxanthin, antheraxanthin, and zeaxanthin. The xanthophyll cycle is involved in regulating energy dissipation in light harvesting complex II.","definition_xrefs":["ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll cycle","secondary_identifiers":["Wikipedia:Xanthophyll#Xanthophyll_cycle","MetaCyc:PWY-5945"],"termid":"GO:0010028"}


id: PBO:0067141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 189, pseudogene","termid":"PBO:0067141"}


id: PBO:0030264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N,N'-(p-xylylidene)bis-aminoguanidine_2HCl","termid":"PBO:0030264"}


id: PBO:0073141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B4, pseudogene","termid":"PBO:0073141"}


id: PBO:0076528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 41","termid":"PBO:0076528"}


id: PBO:0078690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-3","termid":"PBO:0078690"}


id: FYPO:0007025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form N2-methylguanosine occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased tRNA guanosine N2-methylation","synonyms":[{"name":"decreased N2-methylguanosine level in tRNA","type":"related"},{"name":"decreased tRNA N2-methylguanosine formation","type":"exact"},{"name":"decreased tRNA guanosine N2-methylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA guanosine N2-methylation during vegetative growth","type":"exact"},{"name":"decreased tRNA m2G formation","type":"exact"},{"name":"reduced tRNA guanosine N2-methylation","type":"exact"}],"termid":"FYPO:0007025"}


id: GO:0070202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to chromosome","synonyms":[{"name":"regulation of establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070202"}


id: PBO:0073631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 16","termid":"PBO:0073631"}


id: PBO:0069545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 816, pseudogene","termid":"PBO:0069545"}


id: GO:0047493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + ceramide = CMP + H+ + sphingomyelin.","definition_xrefs":["RHEA:16273","EC:2.7.8.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"ceramide cholinephosphotransferase activity","secondary_identifiers":["MetaCyc:CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN","KEGG_REACTION:R01891"],"synonyms":[{"name":"CDP-choline:N-acylsphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-ceramide transferase activity","type":"related"}],"termid":"GO:0047493"}


id: PBO:0081186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 2","termid":"PBO:0081186"}


id: FYPO:0006549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a lower extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased gene expression","synonyms":[{"name":"reduced gene expression","type":"exact"}],"termid":"FYPO:0006549"}


id: FYPO:0000995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell morphology (i.e. the size, shape, or structure of the cell) is altered when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell morphology during nitrogen starvation","synonyms":[{"name":"abnormal cell morphology during nitrogen depletion","type":"exact"},{"name":"abnormal cell morphology during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000995"}


id: PBO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family (predicted)","termid":"PBO:0001885"}


id: PBO:0080091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 53","termid":"PBO:0080091"}


id: FYPO:0008003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein at a site of mechanical stress on the cell surface is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mlr","PMID:34666001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to site of mechanical stress","termid":"FYPO:0008003"}


id: PBO:0065430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 3","termid":"PBO:0065430"}


id: PBO:0038723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 18","termid":"PBO:0038723"}


id: GO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced in the bladder outlet that contributes to the expulsion of urine from the body.","definition_xrefs":["GOC:dph","PMID:15827347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of smooth muscle","termid":"GO:0044557"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle relaxation of the bladder outlet","synonyms":[{"name":"synaptic transmission involved in urination","type":"exact"}],"termid":"GO:0060085"}


id: PBO:0082644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of RNA polymerase II general transcription factor TFIIH; involved in transcription initiation and in nucleotide-excision repair; relocalizes to the cytosol in response to hypoxia; homolog of Chlamydomonas reinhardtii REX1-S protein involved in DNA repair","termid":"PBO:0082644"}


id: MOD:00582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C,2x(15)N labeled L-lysine.","definition_xrefs":["OMSSA:181","PubMed:12716131","Unimod:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,2x(15)N labeled L-lysine","synonyms":[{"name":"13C(6) 15N(2) Silac label","type":"related"},{"name":"Label:13C(6)15N(2)","type":"related"},{"name":"lys-13C615N2","type":"exact"}],"termid":"MOD:00582"}


id: PBO:0047749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin interacting protein 2","termid":"PBO:0047749"}


id: GO:0075286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangiospore formation","termid":"GO:0075286"}


id: PBO:0027458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_morphology","termid":"PBO:0027458"}


id: GO:0000836
data:
  {"annotated_genes":["SJAG_04384","SJAG_03345","SJAG_01134","SJAG_05274","SJAG_03841","SJAG_01051","SJAG_01709"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85429,100093,100927,101404,103796,105690,113254],"is_not":false,"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal and membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p. In mammals, this complex contains the ubiquitin ligase HRD1 (Synoviolin) or AMFR (gp78).","definition_xrefs":["GOC:bf","PMID:16619026","PMID:16873066","GOC:elh","PMID:21454652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005789","GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HRD1 ubiquitin ligase complex","type":"related"}],"termid":"GO:0000836","terms_by_termid":{"GO:0000836":null}}


id: PBO:0071074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 76","termid":"PBO:0071074"}


id: PBO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug100","termid":"PBO:0017009"}


id: PBO:0056229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member L2","termid":"PBO:0056229"}


id: GO:0090732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure consisting of parallel, hexagonally arranged actin tubules, comprising filamentous actin and disulfide cross-linked cofilin multimers.","definition_xrefs":["PMID:22573689","GOC:sl","PMID:24760020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin rod","termid":"GO:0031002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"cofilin-actin rod","termid":"GO:0090732"}


id: PBO:0077991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing","termid":"PBO:0077991"}


id: PBO:0044393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 18","termid":"PBO:0044393"}


id: PBO:0065386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC4 and SRSF1 interacting protein 1","termid":"PBO:0065386"}


id: GO:0070967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to F420, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420 binding","termid":"GO:0070967"}


id: GO:0006083
data:
  {"annotated_genes":["SJAG_01989","SJAG_02741","SJAG_02769","SJAG_02985","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75631,87585,110465],"is_not":false,"summary":null,"term":"GO:0006083"},{"annotations":[96990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[112218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01989":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acetate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acetate metabolism","type":"exact"}],"termid":"GO:0006083","terms_by_termid":{"GO:0006083":null,"GO:0019413":null,"GO:0019427":null}}


id: GO:0034638
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113089],"is_not":false,"summary":null,"term":"GO:0034638"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine breakdown","type":"exact"},{"name":"phosphatidylcholine catabolism","type":"exact"},{"name":"phosphatidylcholine degradation","type":"exact"}],"termid":"GO:0034638","terms_by_termid":{"GO:0034638":null}}


id: GO:0140560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine. The enzyme, found in animals and insects, is involved in the biosynthesis of the alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)- beta-D-glucosyl trisaccharide on epidermal growth factor-like (EGF- like) domains.","definition_xrefs":["PMID:22117070","RHEA:22820","PMID:8982869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"xylosyl alpha-1,3-xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.62"],"termid":"GO:0140560"}


id: PBO:0054802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2215","termid":"PBO:0054802"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: PBO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lays_eggs_in","termid":"PBO:0034255"}


id: GO:0017125
data:
  {"annotated_genes":["SJAG_03906"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99029],"is_not":false,"summary":null,"term":"GO:0017125"}]},"cv_name":"molecular_function","definition":"Catalysis of the insertion of a dCMP residue opposite a template abasic site in DNA.","definition_xrefs":["PMID:10535901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"deoxycytidyl transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110308","GO:0019986"],"synonyms":[{"name":"deoxycytidyl transferase activity, template-dependent","type":"narrow"}],"termid":"GO:0017125","terms_by_termid":{"GO:0017125":null}}


id: PBO:0087577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ada histone acetyltransferase complex; required for structural integrity of the complex; Ahc2p and Ahc1p are unique to the ADA complex and not shared with the related SAGA and SLIK complexes; Ahc2p may tether Ahc1p to the complex","termid":"PBO:0087577"}


id: MOD:01358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - Use when labelling post-digest","definition_xrefs":["PubMed:15602776","Unimod:687#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form - site N-term","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form","type":"related"},{"name":"ICPL:2H(4)","type":"related"}],"termid":"MOD:01358"}


id: GO:0035645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell of the intestine.","definition_xrefs":["GOC:BHF","CL:0002504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteric smooth muscle cell differentiation","synonyms":[{"name":"intestinal smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035645"}


id: _global:connects_on
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X connects_on Y, Z, R iff whenever Z is on a R, X is adjacent to a Y and adjacent to a Z.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connects_on","termid":"_global:connects_on"}


id: FYPO:0005669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to hydroxyurea. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to hydroxyurea (obsolete FYPO:0005669)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to HU","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to hydroxyurea","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to hydroxyurea","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005669"}


id: GO:1900540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fumonisin catabolic process","synonyms":[{"name":"fumonisin breakdown","type":"exact"},{"name":"fumonisin catabolism","type":"exact"},{"name":"fumonisin degradation","type":"related"}],"termid":"GO:1900540"}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: GO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ghrelin to initiate a change in cell activity.","definition_xrefs":["PMID:17983853","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"growth hormone secretagogue receptor activity","synonyms":[{"name":"ghrelin receptor activity","type":"exact"}],"termid":"GO:0001616"}


id: PBO:0041228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 50","termid":"PBO:0041228"}


id: PR:O74522
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adn3 gene.","definition_xrefs":["UniProtKB:O74522","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.10","synonyms":[{"name":"LisH domain-containing protein adn3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-adn3","type":"exact"}],"termid":"PR:O74522"}


id: PBO:0065093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 2","termid":"PBO:0065093"}


id: GO:0016004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activator activity","termid":"GO:0060229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"phospholipase activator activity","termid":"GO:0016004"}


id: PBO:0086506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication","termid":"PBO:0086506"}


id: PBO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.30","termid":"PBO:0000268"}


id: PBO:0062229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 2","termid":"PBO:0062229"}


id: PBO:0057462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 581","termid":"PBO:0057462"}


id: GO:1905043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelium regeneration.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:23221517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of epithelium regeneration","termid":"GO:1905041"},{"relation_name":"positively_regulates","term_name":"epithelium regeneration","termid":"GO:1990399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelium regeneration","synonyms":[{"name":"activation of epithelium regeneration","type":"narrow"},{"name":"activation of regeneration of epithelium","type":"narrow"},{"name":"positive regulation of regeneration of epithelium","type":"exact"},{"name":"up regulation of epithelium regeneration","type":"exact"},{"name":"up regulation of regeneration of epithelium","type":"exact"},{"name":"up-regulation of epithelium regeneration","type":"exact"},{"name":"up-regulation of regeneration of epithelium","type":"exact"},{"name":"upregulation of epithelium regeneration","type":"exact"},{"name":"upregulation of regeneration of epithelium","type":"exact"}],"termid":"GO:1905043"}


id: PBO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity-regulating kinase Kin1","termid":"PBO:0004162"}


id: PBO:0074428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 28","termid":"PBO:0074428"}


id: GO:0102070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 18-hydroxyoleate + a lipid hydroperoxide = 9,10-epoxy-18-hydroxystearate + a lipid alcohol.","definition_xrefs":["PMID:12226220","PMID:468835","GOC:pz","PMID:14535881"],"gene_count":0,"genotype_count":0,"name":"obsolete 18-hydroxyoleate peroxygenase activity (obsolete GO:0102070)","termid":"GO:0102070"}


id: _global:causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"precedes","termid":"_global:precedes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of","secondary_identifiers":["RO:0002411"],"termid":"_global:causally_upstream_of"}


id: PBO:0091645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase","termid":"PBO:0091645"}


id: PBO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_activates","termid":"PBO:0034214"}


id: GO:1905331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["PMID:25745997","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"negatively_regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of morphogenesis of an epithelium","synonyms":[{"name":"down regulation of epithelium morphogenesis","type":"exact"},{"name":"down regulation of morphogenesis of an epithelium","type":"exact"},{"name":"down-regulation of epithelium morphogenesis","type":"exact"},{"name":"down-regulation of morphogenesis of an epithelium","type":"exact"},{"name":"downregulation of epithelium morphogenesis","type":"exact"},{"name":"downregulation of morphogenesis of an epithelium","type":"exact"},{"name":"inhibition of epithelium morphogenesis","type":"narrow"},{"name":"inhibition of morphogenesis of an epithelium","type":"narrow"},{"name":"negative regulation of epithelium morphogenesis","type":"exact"}],"termid":"GO:1905331"}


id: PBO:0028976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_GSNO","termid":"PBO:0028976"}


id: PBO:0043375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 5","termid":"PBO:0043375"}


id: FYPO:0000351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall during vegetative growth","termid":"FYPO:0000027"},{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell wall morphology during vegetative growth","synonyms":[{"name":"abnormal cell wall morphology during mitotic cell cycle","type":"related"},{"name":"cell wall morphology: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000351"}


id: PBO:0054539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1939","termid":"PBO:0054539"}


id: PBO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_binding","termid":"PBO:0031563"}


id: PBO:0012217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_movement_of","termid":"PBO:0012217"}


id: PBO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.3","termid":"PBO:0001863"}


id: SO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002057 intronic_splicing_enhancer (obsolete SO:0002057)","synonyms":[{"name":"ISE","type":"exact"}],"termid":"SO:0002057"}


id: PR:Q9UTE2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10755:SF0","PRO:DNx","OMA:SCHPO00382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxygen-dependent coproporphyrinogen-III oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.11","secondary_identifiers":["UniProtKB:Q9UTE2"],"synonyms":[{"name":"COX (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Coproporphyrinogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CPOX","type":"exact"},{"name":"coprogen oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTE2"}


id: GO:0046187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"acetaldehyde catabolic process","synonyms":[{"name":"acetaldehyde breakdown","type":"exact"},{"name":"acetaldehyde catabolism","type":"exact"},{"name":"acetaldehyde degradation","type":"exact"}],"termid":"GO:0046187"}


id: GO:0016419
data:
  {"annotated_genes":["SJAG_03972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96870,84312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.39"],"termid":"GO:0016419","terms_by_termid":{"GO:0004314":null}}


id: PBO:0084522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BCH2 has a paralog, CHS6, that arose from the whole genome duplication","termid":"PBO:0084522"}


id: PBO:0049425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 2","termid":"PBO:0049425"}


id: PBO:0027858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_S_phase_during_cellular_response_to_DNA_damage","termid":"PBO:0027858"}


id: PBO:0075056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-19","termid":"PBO:0075056"}


id: GO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"}


id: PBO:0044568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D4Z4 binding element transcript","termid":"PBO:0044568"}


id: GO:1904334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:25733668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"},{"relation_name":"is_a","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"},{"relation_name":"is_a","term_name":"heme import into cell","termid":"GO:0140420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0098771","GO:0051179"],"is_obsolete":false,"name":"heme import across plasma membrane","synonyms":[{"name":"heme assimilation","type":"broad"}],"termid":"GO:1904334"}


id: GO:0035561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["GOC:bf","PMID:20404130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chromatin binding","termid":"GO:0035561"}


id: GO:0043843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate.","definition_xrefs":["EC:2.7.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-specific glucokinase activity","secondary_identifiers":["Reactome:R-HSA-5696021","RHEA:11460"],"synonyms":[{"name":"ADP-dependent glucokinase activity","type":"related"},{"name":"ADP:D-glucose 6-phosphotransferase activity","type":"related"}],"termid":"GO:0043843"}


id: PBO:0016996
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP U2 Auxiliary Factor","termid":"PBO:0016996"}


id: GO:1905807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synapse pruning.","definition_xrefs":["GOC:TermGenie","PMID:27779093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse pruning","synonyms":[{"name":"down regulation of synapse disassembly","type":"exact"},{"name":"down-regulation of synapse disassembly","type":"exact"},{"name":"downregulation of synapse disassembly","type":"exact"},{"name":"inhibition of synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905807"}


id: PBO:0086106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of succinate dehydrogenase; interacts with flavinylated Sdh1p and may function as a chaperone for free Sdh1p, protecting its FAD cofactor from redox reactions before assembly of the complex; soluble protein of the mitochondrial matrix; respiratory defect of null mutant is functionally complemented by Drosophila and human orthologs","termid":"PBO:0086106"}


id: PBO:0089191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPase with a role in RNA polymerase localization","termid":"PBO:0089191"}


id: PBO:0065031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 6","termid":"PBO:0065031"}


id: PBO:0088958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF866 family protein, human C1orf123 ortholog","termid":"PBO:0088958"}


id: GO:0019795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of any amino acid that does not normally occur as a constituent residue of proteins.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete nonprotein amino acid biosynthetic process (obsolete GO:0019795)","synonyms":[{"name":"nonprotein amino acid anabolism","type":"exact"},{"name":"nonprotein amino acid biosynthesis","type":"exact"},{"name":"nonprotein amino acid biosynthetic process","type":"exact"},{"name":"nonprotein amino acid formation","type":"exact"},{"name":"nonprotein amino acid synthesis","type":"exact"}],"termid":"GO:0019795"}


id: PBO:0070603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 71","termid":"PBO:0070603"}


id: PBO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54","termid":"PBO:0039561"}


id: PBO:0069049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 295, pseudogene","termid":"PBO:0069049"}


id: GO:0033749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 3 of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H4 demethylase activity","termid":"GO:0141058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0032452","GO:0016491","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H4R3 demethylase activity","synonyms":[{"name":"histone H4-methyl-arginine-3 demethylase activity","type":"exact"},{"name":"histone H4R3me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0033749"}


id: PBO:0030663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_leucine_import","termid":"PBO:0030663"}


id: PBO:0086883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor containing a WOPR domain; binds DNA in vitro; similar to C. albicans Wor1p transcription factor that regulates white-opaque switching; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086883"}


id: FYPO:0008018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:7903653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on glutamine nitrogen source","synonyms":[{"name":"normal cell population growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0008018"}


id: PBO:0061818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 8 Y-linked","termid":"PBO:0061818"}


id: GO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an epidermal growth factor-type receptor binding to one of its physiological ligands. This process contributes to lung development.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway involved in lung development","synonyms":[{"name":"epidermal growth factor receptor signalling pathway involved in lung development","type":"exact"}],"termid":"GO:0060507"}


id: GO:1900148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration.","definition_xrefs":["GOC:TermGenie","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"negatively_regulates","term_name":"Schwann cell migration","termid":"GO:0036135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell migration","synonyms":[{"name":"down regulation of Schwann cell migration","type":"exact"},{"name":"down-regulation of Schwann cell migration","type":"exact"},{"name":"downregulation of Schwann cell migration","type":"exact"},{"name":"inhibition of Schwann cell migration","type":"narrow"}],"termid":"GO:1900148"}


id: PBO:0077402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 135","termid":"PBO:0077402"}


id: PBO:0076723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional and immune response regulator","termid":"PBO:0076723"}


id: MOD:00081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamate 5-methyl ester.","definition_xrefs":["Unimod:34#E","DeltaMass:167","PubMed:6300110","OMSSA:17","OMSSA:70","PubMed:16888","RESID:AA0072#GLU"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamic acid 5-methyl ester","termid":"MOD:01453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester (Glu)","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"5-methyl esterified L-glutamic acid","type":"exact"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"MOD_RES Glutamate methyl ester (Glu)","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"O-methyl Glutamyl","type":"exact"},{"name":"O5MeGlu","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"},{"name":"meestere","type":"exact"},{"name":"methyl ester","type":"related"},{"name":"methyle","type":"exact"}],"termid":"MOD:00081"}


id: FYPO:0001636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular glutamine level","synonyms":[{"name":"normal cellular L-glutamine level","type":"exact"},{"name":"normal cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutamine level during vegetative growth","type":"exact"},{"name":"normal level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001636"}


id: PBO:0078184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 1 (pseudogene)","termid":"PBO:0078184"}


id: PBO:0067848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 150","termid":"PBO:0067848"}


id: PBO:0081516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 425","termid":"PBO:0081516"}


id: SO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where a deletion fuses genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_fusion","synonyms":[{"name":"feature fusion","type":"exact"}],"termid":"SO:0001882"}


id: GO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the signal sequence of a translated protein binds to and forms a complex with the Sec complex.","definition_xrefs":["PMID:8707814","PMID:12518217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"post-translational protein targeting to endoplasmic reticulum membrane","termid":"GO:0006620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"post-translational protein targeting to membrane, docking","synonyms":[{"name":"Sec-translated protein complex assembly","type":"exact"},{"name":"posttranslational protein membrane targeting, docking","type":"exact"},{"name":"posttranslational protein targeting to membrane, docking","type":"exact"},{"name":"protein docking during posttranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0031203"}


id: PBO:0017831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transmembrane transporter Zrt2 (predicted)","termid":"PBO:0017831"}


id: PBO:0074864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49B","termid":"PBO:0074864"}


id: GO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"}


id: GO:0046920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->3) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"alpha-(1->3)-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9603984","Reactome:R-HSA-9605609","Reactome:R-HSA-9605644","Reactome:R-HSA-9605682"],"synonyms":[{"name":"alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046920"}


id: GO:0021798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain dorsal/ventral pattern formation","synonyms":[{"name":"forebrain dorsal-ventral pattern formation","type":"exact"},{"name":"forebrain dorsoventral pattern formation","type":"exact"}],"termid":"GO:0021798"}


id: PBO:0053626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 670","termid":"PBO:0053626"}


id: GO:0110002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"regulates","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA methylation","termid":"GO:0110002"}


id: PBO:0064148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 1","termid":"PBO:0064148"}


id: PBO:0060472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase pseudogene 2","termid":"PBO:0060472"}


id: PBO:0042007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 62","termid":"PBO:0042007"}


id: GO:0090132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up an epithelium undergo directed movement.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue migration","termid":"GO:0090130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium migration","termid":"GO:0090132"}


id: PBO:0026965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth_during_phosphate_starvation","termid":"PBO:0026965"}


id: PBO:0054503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1903","termid":"PBO:0054503"}


id: GO:0019049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with the ability of the host to mount a defense in response to its presence. Host defenses may be induced by the presence of the virus or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:1555811272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus-mediated perturbation of host defense response","secondary_identifiers":["GO:0050690","GO:0030683","GO:0019053","GO:0019052"],"synonyms":[{"name":"evasion of host defenses by virus","type":"narrow"},{"name":"mitigation of host antiviral defense response","type":"narrow"},{"name":"mitigation of host defenses by virus","type":"exact"},{"name":"perturbation of host defense response by virus","type":"exact"},{"name":"regulation by virus of antiviral response","type":"narrow"},{"name":"regulation of defense response to virus by virus","type":"exact"},{"name":"viral host defence evasion","type":"narrow"},{"name":"viral host defense evasion","type":"narrow"},{"name":"viral regulation of antiviral response","type":"exact"}],"termid":"GO:0019049"}


id: PBO:0052555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor F2","termid":"PBO:0052555"}


id: RO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A biotic interaction in which the two organisms live together in more or less intimate association.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiotically_interacts_with","termid":"RO:0002440"}


id: GO:0018276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an isopeptide cross-link between peptidyl-lysine and peptidyl-glycine to produce N6-glycyl-L-lysine. This is distinct from the formation of the thiolester intermediate, which occurs during ubiquitination.","definition_xrefs":["RESID:AA0125"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptide cross-linking via N6-glycyl-L-lysine (obsolete GO:0018276)","termid":"GO:0018276"}


id: PATO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's not being in contact with another entity, or of no longer being connected or joined with another entity.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separated from","synonyms":[{"name":"discontiguous","type":"related"},{"name":"divided_from","type":"related"},{"name":"splitted from","type":"related"}],"termid":"PATO:0001505"}


id: PBO:0051307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR1-1 (pseudogene)","termid":"PBO:0051307"}


id: PBO:0029625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0029625"}


id: PBO:0075587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 14 (putative)","termid":"PBO:0075587"}


id: FYECO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bismuth ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Bi ions","synonyms":[{"name":"bismuth ions added","type":"exact"}],"termid":"FYECO:0000037"}


id: GO:0099001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a long, flexible tail ejection system consisting a baseplate, a central tube and a terminator complex which attaches the tail to the phage capsid. Upon binding to the host cell surface, the baseplate changes its conformation and triggers genome ejection into the host cell cytoplasm. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["VZ:3952","GOC:dos","PMID:22297512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, long flexible tail mechanism","synonyms":[{"name":"viral genome ejection through host cell envelope, long flexible tail mechanism","type":"related"},{"name":"viral long flexible tail ejection system","type":"exact"}],"termid":"GO:0099001"}


id: PBO:0036094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_mitotic_S_phase","termid":"PBO:0036094"}


id: GO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The insertion of one or two non-coded nucleotides during the transcription of a mitochondrial rRNA. Such additions are known to occur in myxomycetes such as Physarum, Didymium, and Stemonitis.","definition_xrefs":["GOC:curators","PMID:8306965","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"cotranscriptional mitochondrial rRNA nucleotide insertion","termid":"GO:0002110"}


id: GO:0140811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone 2A L-arginyl (position 3)= histone 2A L-citrullyl (position 3) + NH4+, resulting in histone H2A citrullination at position 3.","definition_xrefs":["PMID:15823041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"histone H2AR3 arginine deiminase activity","synonyms":[{"name":"H2A-R3 citrullination","type":"exact"},{"name":"histone H2A-R3 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H2A-R3 specific)","type":"exact"}],"termid":"GO:0140811"}


id: GO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of estrogen receptor binding, interacting selectively with an estrogen receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of estrogen receptor binding (obsolete GO:0071899)","termid":"GO:0071899"}


id: PBO:0055943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 52","termid":"PBO:0055943"}


id: PBO:0065910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB GTPase activating protein 1 like","termid":"PBO:0065910"}


id: GO:0018367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete free L-amino acid racemization (obsolete GO:0018367)","synonyms":[{"name":"free L-amino acid racemization","type":"exact"}],"termid":"GO:0018367"}


id: PBO:0082426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bipolar kinesin motor protein; switches from minus- to plus-end-directed motility in vitro depending on conditions; involved in mitotic spindle assembly and chromosome segregation","termid":"PBO:0082426"}


id: GO:0004163
data:
  {"annotated_genes":["SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90592],"is_not":false,"summary":null,"term":"GO:0004163"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-diphosphomevalonate + ATP = ADP + CO2 + H+ + isopentenyl diphosphate + phosphate.","definition_xrefs":["EC:4.1.1.33","RHEA:23732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diphosphomevalonate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN","KEGG_REACTION:R01121","Reactome:R-HSA-191414"],"synonyms":[{"name":"5-pyrophosphomevalonate decarboxylase activity","type":"related"},{"name":"ATP:(R)-5-diphosphomevalonate carboxy-lyase (adding ATP; isopentenyl-diphosphate-forming)","type":"related"},{"name":"ATP:(R)-5-diphosphomevalonate carboxy-lyase (dehydrating)","type":"related"},{"name":"mevalonate 5-diphosphate decarboxylase activity","type":"related"},{"name":"mevalonate diphosphate decarboxylase activity","type":"related"},{"name":"mevalonate pyrophosphate decarboxylase activity","type":"related"},{"name":"mevalonate-5-pyrophosphate decarboxylase activity","type":"related"},{"name":"pyrophosphomevalonate decarboxylase activity","type":"related"},{"name":"pyrophosphomevalonic acid decarboxylase activity","type":"related"}],"termid":"GO:0004163","terms_by_termid":{"GO:0004163":null}}


id: PBO:0057884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3188","termid":"PBO:0057884"}


id: PBO:0089756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H dehydrogenase (quinone)","termid":"PBO:0089756"}


id: GO:0018836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alkylmercury + H+ = an alkane + Hg2+.","definition_xrefs":["RHEA:18777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alkylmercury lyase activity","secondary_identifiers":["EC:4.99.1.2","UM-BBD_enzymeID:e0055","MetaCyc:ALKYLMERCURY-LYASE-RXN"],"synonyms":[{"name":"alkylmercury mercuric-lyase (alkane-forming)","type":"related"},{"name":"alkylmercury mercuric-lyase activity","type":"related"},{"name":"organomercurial lyase activity","type":"related"},{"name":"organomercury lyase activity","type":"related"}],"termid":"GO:0018836"}


id: PBO:0087378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding beta-propeller protein; physically associates with sterol-binding StARkin domain-containing proteins Ysp2/Lam2/Ltc4 and Lam4/Ltc3; essential for retrograde transport of ergosterol from the plasma membrane to the endoplasmic reticulum at ER-PM contact sites; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; non-essential gene; has a paralog, DGR2, that arose from the whole genome duplication","termid":"PBO:0087378"}


id: SOFP:comment
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Annotation comments, from a human curator","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comment","termid":"SOFP:comment"}


id: GO:0050805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"negatively_regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission","synonyms":[{"name":"down regulation of synaptic transmission","type":"exact"},{"name":"down-regulation of synaptic transmission","type":"exact"},{"name":"downregulation of synaptic transmission","type":"exact"},{"name":"inhibition of synaptic transmission","type":"narrow"}],"termid":"GO:0050805"}


id: PBO:0047612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase pseudogene 1","termid":"PBO:0047612"}


id: PBO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing Dbl1, implicated in DNA repair","termid":"PBO:0110072"}


id: PBO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1 like","termid":"PBO:0060149"}


id: PBO:0047410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 48","termid":"PBO:0047410"}


id: GO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an atrial cardiomyocyte to an AV node cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"gap junction channel activity involved in atrial cardiac muscle cell-AV node cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in atrial cardiomyocyte-AV node cell electrical coupling","type":"related"},{"name":"gap junction channel activity involved in atrial cardiomyocyte-atrioventricular node cell electrical coupling","type":"exact"}],"termid":"GO:0086076"}


id: GO:0048364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo.","definition_xrefs":["GOC:jid","PO:0009005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"root system development","termid":"GO:0022622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root development","termid":"GO:0048364"}


id: FYPO:0003227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the long cytoplasmic microtubules characteristic of interphase cells remain present after mitosis begins and the mitotic spindle forms.","definition_xrefs":["PomBase:mah","PMID:18799626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"interphase microtubules present during mitosis","synonyms":[{"name":"interphase cytoplasmic microtubules present during mitosis","type":"exact"},{"name":"interphase microtubules present during M phase of mitotic cell cycle","type":"related"},{"name":"interphase microtubules present during mitosis during vegetative growth","type":"exact"},{"name":"interphase microtubules present during mitotic M phase","type":"related"},{"name":"interphase microtubules present during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003227"}


id: PBO:0060699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated","termid":"PBO:0060699"}


id: GO:1990912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microwave radiation stimulus.","definition_xrefs":["PMID:21241601"],"gene_count":0,"genotype_count":0,"name":"obsolete response to microwave radiation (obsolete GO:1990912)","termid":"GO:1990912"}


id: PBO:0074880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59B","termid":"PBO:0074880"}


id: GO:0018867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature. It is a major component in tea-tree oils, and gives off a piney smelling odor.","definition_xrefs":["UM-BBD_pathwayID:apn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-pinene metabolic process","synonyms":[{"name":"alpha-pinene metabolism","type":"exact"}],"termid":"GO:0018867"}


id: PBO:0030794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization_in_prospore","termid":"PBO:0030794"}


id: PBO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 41","termid":"PBO:0044354"}


id: GO:0004467
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101713,109546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[101714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[101715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-CoA + AMP + diphosphate. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:15421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"long-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-192137","Reactome:R-HSA-193401","Reactome:R-HSA-193766","Reactome:R-HSA-548843","MetaCyc:PWY-5143","Reactome:R-HSA-193711","Reactome:R-HSA-2046098","Reactome:R-HSA-193743","Reactome:R-HSA-193727","Reactome:R-HSA-9734535","UM-BBD_enzymeID:e0025","EC:6.2.1.3","Reactome:R-HSA-201035","Reactome:R-HSA-2046085","Reactome:R-HSA-5696004","GO:0003996","Reactome:R-HSA-159425","MetaCyc:RXN-7904","Reactome:R-HSA-193424","Reactome:R-HSA-193407"],"synonyms":[{"name":"LCFA synthetase activity","type":"related"},{"name":"acyl-CoA ligase activity","type":"related"},{"name":"acyl-CoA synthetase activity","type":"related"},{"name":"acyl-activating enzyme activity","type":"broad"},{"name":"fatty acid thiokinase (long-chain) activity","type":"related"},{"name":"lignoceroyl-CoA synthase activity","type":"related"},{"name":"long chain fatty acyl-CoA synthetase activity","type":"related"},{"name":"long-chain acyl CoA synthetase activity","type":"related"},{"name":"long-chain acyl-CoA synthetase activity","type":"exact"},{"name":"long-chain acyl-coenzyme A synthetase activity","type":"related"},{"name":"long-chain fatty acid activation","type":"related"},{"name":"long-chain fatty acyl coenzyme A synthetase activity","type":"related"},{"name":"long-chain-fatty-acid-CoA ligase activity","type":"exact"},{"name":"long-chain-fatty-acyl-CoA synthetase activity","type":"exact"},{"name":"pristanoyl-CoA synthetase","type":"narrow"},{"name":"stearoyl-CoA synthetase","type":"narrow"},{"name":"thiokinase","type":"related"}],"termid":"GO:0004467","terms_by_termid":{"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: GO:0015292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transport of a single molecular species across a membrane; transport is independent of the movement of any other molecular species.","definition_xrefs":["PMID:10839820","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"uniporter activity","synonyms":[{"name":"facilitated diffusion carrier","type":"exact"},{"name":"single-species transporter activity","type":"exact"},{"name":"uniport","type":"related"}],"termid":"GO:0015292"}


id: PBO:0065849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 1","termid":"PBO:0065849"}


id: GO:0102477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6C-glucosyl-2,5,7-trihydroxyflavanone = H+ + 6C-hexosyl chrysin + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2,5,7-trihydroxyflavanone 6C-glucoside dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14088"],"termid":"GO:0102477"}


id: PBO:0089572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3e","termid":"PBO:0089572"}


id: GO:0097497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of negative regulation of cell adhesion that results in blood vessel endothelial cells splitting off from an existing endothelial sheet.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"blood vessel endothelial cell delamination","termid":"GO:0097497"}


id: PBO:0083110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase; involved in base excision repair; acts in both nucleus and mitochondrion; creates a double-strand break at mtDNA origins that stimulates replication in response to oxidative stress; required for maintaining mitochondrial genome integrity; NTG1 has a paralog, NTG2, that arose from the whole genome duplication","termid":"PBO:0083110"}


id: FYPO:0005985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acetic acid. Cells stop growing (and may die) at a concentration of acetic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to acetic acid","synonyms":[{"name":"hypersensitive to acetic acid","type":"exact"},{"name":"sensitive to acetic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to acetic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0005985"}


id: PBO:0016557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub3 (predicted)","termid":"PBO:0016557"}


id: GO:0019413
data:
  {"annotated_genes":["SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96990],"is_not":false,"summary":null,"term":"GO:0019413"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acetate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetate anabolism","type":"exact"},{"name":"acetate biosynthesis","type":"exact"},{"name":"acetate formation","type":"exact"},{"name":"acetate synthesis","type":"exact"}],"termid":"GO:0019413","terms_by_termid":{"GO:0019413":null}}


id: PBO:0045745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 2","termid":"PBO:0045745"}


id: GO:0003847
data:
  {"annotated_genes":["SJAG_04311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97985],"is_not":false,"summary":null,"term":"GO:0003847"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate.","definition_xrefs":["EC:3.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"1-alkyl-2-acetylglycerophosphocholine esterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8869206","RHEA:17777","MetaCyc:3.1.1.47-RXN"],"synonyms":[{"name":"1-alkyl-2-acetyl-sn-glycero-3-phosphocholine acetohydrolase activity","type":"related"},{"name":"1-alkyl-2-acetyl-sn-glycero-3-phosphocholine acetylhydrolase activity","type":"related"},{"name":"2-acetyl-1-alkylglycerophosphocholine esterase activity","type":"exact"},{"name":"LDL-PLA(2) activity","type":"related"},{"name":"LDL-PLA2","type":"related"},{"name":"LDL-associated phospholipase A(2) activity","type":"related"},{"name":"LDL-associated phospholipase A2","type":"related"},{"name":"PAF 2-acylhydrolase activity","type":"related"},{"name":"PAF acetylhydrolase activity","type":"related"},{"name":"alkylacetyl-GPC:acetylhydrolase activity","type":"related"},{"name":"platelet-activating factor acetylhydrolase activity","type":"related"}],"termid":"GO:0003847","terms_by_termid":{"GO:0003847":null}}


id: GO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal cysteine of proteins to form the derivative N-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-cysteine acetylation","termid":"GO:0018533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-cysteine acetylation","secondary_identifiers":["GO:0017191"],"synonyms":[{"name":"peptidyl-cysteine N-acetylation","type":"exact"}],"termid":"GO:0018275"}


id: PBO:0090792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Pab2","termid":"PBO:0090792"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: PR:Q9Y7P4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein rml2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.15","secondary_identifiers":["UniProtKB:Q9Y7P4"],"synonyms":[{"name":"L2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rplB","type":"exact"}],"termid":"PR:Q9Y7P4"}


id: RO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"has substance added\\\" is a relation existing between a (physical) entity and a substance in which the entity has had the substance added to it at some point in time.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_substance_added","termid":"RO:0009001"}


id: GO:0032746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-22 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-22 production","termid":"GO:0032666"},{"relation_name":"positively_regulates","term_name":"interleukin-22 production","termid":"GO:0032626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-22 production","secondary_identifiers":["GO:0045395"],"synonyms":[{"name":"activation of interleukin-22 production","type":"narrow"},{"name":"positive regulation of IL-22 production","type":"exact"},{"name":"positive regulation of interleukin-22 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-22 production","type":"narrow"},{"name":"up regulation of interleukin-22 production","type":"exact"},{"name":"up-regulation of interleukin-22 production","type":"exact"},{"name":"upregulation of interleukin-22 production","type":"exact"}],"termid":"GO:0032746"}


id: FYPO:0001244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to thiamine starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to thiamine starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to thiamine starvation","type":"related"},{"name":"decreased RNA level during cellular response to thiamine depletion","type":"exact"},{"name":"decreased RNA level during cellular response to thiamine deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to vitamin B1 starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to thiamine starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to thiamine starvation","type":"exact"},{"name":"reduced RNA level during cellular response to thiamine starvation","type":"exact"}],"termid":"FYPO:0001244"}


id: PBO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actively_participates_in","termid":"PBO:0017486"}


id: GO:0120093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"}


id: PBO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine-mismatch binding protein 1","termid":"PBO:0001465"}


id: PBO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (predicted)","termid":"PBO:0001224"}


id: PBO:0081464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 334","termid":"PBO:0081464"}


id: GO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action or movement due to the application of a sudden unexpected stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"startle response","secondary_identifiers":["Wikipedia:Startle_reaction"],"termid":"GO:0001964"}


id: GO:0043002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043002)","synonyms":[{"name":"down regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"down-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"downregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"inhibition of Golgi to plasma membrane CFTR protein transport","type":"narrow"}],"termid":"GO:0043002"}


id: PATO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal orientation","synonyms":[{"name":"posterodorsally directed","type":"exact"}],"termid":"PATO:0002504"}


id: PBO:0085876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0085876"}


id: PBO:0004256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit Sld5","termid":"PBO:0004256"}


id: PBO:0089397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma1","termid":"PBO:0089397"}


id: PBO:0062517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 3 (gene/pseudogene)","termid":"PBO:0062517"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: PBO:0053765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1010","termid":"PBO:0053765"}


id: PBO:0044252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC27 spliceosome associated cyclophilin","termid":"PBO:0044252"}


id: GO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a farnesylated protein.","definition_xrefs":["PMID:14555765","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"farnesylated protein binding","termid":"GO:0001918"}


id: PBO:0083366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF DIC1/YLR348C","termid":"PBO:0083366"}


id: PR:Q9UTJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgr1 gene.","definition_xrefs":["UniProtKB:Q9UTJ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein cgr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.05c","synonyms":[{"name":"Spom972h-cgr1","type":"exact"}],"termid":"PR:Q9UTJ4"}


id: PBO:0071669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 1","termid":"PBO:0071669"}


id: PBO:0069932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1225, pseudogene","termid":"PBO:0069932"}


id: PBO:0083745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Rpd3S histone deacetylase complex; interacts with Eaf3p","termid":"PBO:0083745"}


id: GO:0005310
data:
  {"annotated_genes":["SJAG_00671","SJAG_00522","SJAG_02140","SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[84610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[92705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[97785,114543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[97786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[97787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[84611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[97788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[97789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"dicarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372843","GO:0005312","GO:0015365","Reactome:R-HSA-1614546"],"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"},{"name":"dicarboxylate carrier","type":"narrow"},{"name":"dicarboxylic acid permease activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005310","terms_by_termid":{"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015183":null,"GO:0015366":null,"GO:0034658":null,"GO:0097434":null,"GO:1901239":null}}


id: MOD:01070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a pentafluorophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafluorophenyl modified residue","synonyms":[{"name":"Pfp","type":"exact"}],"termid":"MOD:01070"}


id: GO:1905045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:22393241","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"down regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"down-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"downregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"inhibition of Schwann cell proliferation involved in axon regeneration","type":"narrow"}],"termid":"GO:1905045"}


id: PBO:0011489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-N, kinetochore protein Mis15","termid":"PBO:0011489"}


id: PR:O74422
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C162.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.06c","secondary_identifiers":["UniProtKB:O74422"],"synonyms":[{"name":"Spom972h-CHMP5","type":"exact"}],"termid":"PR:O74422"}


id: PBO:0054996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2411","termid":"PBO:0054996"}


id: PBO:0051099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-2","termid":"PBO:0051099"}


id: FYPO:0000996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other when the cell is subject to nitrogen starvation. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered cell","termid":"FYPO:0000014"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"tapered cell during nitrogen starvation","synonyms":[{"name":"bottle-shaped cell during nitrogen starvation","type":"exact"},{"name":"cell morphology, bottle/skittle during nitrogen starvation","type":"exact"},{"name":"skittle-shaped cell during nitrogen starvation","type":"exact"},{"name":"tapered cell during nitrogen depletion","type":"exact"},{"name":"tapered cell during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000996"}


id: GO:0097529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a myeloid leukocyte within or between different tissues and organs of the body.","definition_xrefs":["GOC:cvs","PMID:22342843","PMID:24157461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte migration","termid":"GO:0097529"}


id: FYECO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamate nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"PMG","type":"narrow"},{"name":"glucose minimal medium, glutamate nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamate nitrogen source","type":"related"}],"termid":"FYECO:0000263"}


id: PBO:0089550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein Fhn1","termid":"PBO:0089550"}


id: GO:0033990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-acetyl-L-2,4-diaminobutyrate = ectoine + H2O.","definition_xrefs":["RHEA:17281","EC:4.2.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ectoine synthase activity","secondary_identifiers":["KEGG_REACTION:R06979","MetaCyc:R103-RXN"],"synonyms":[{"name":"4-N-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"},{"name":"EctC","type":"related"},{"name":"L-ectoine synthase activity","type":"related"},{"name":"N-acetyldiaminobutanoate dehydratase activity","type":"related"},{"name":"N-acetyldiaminobutyrate dehydratase activity","type":"related"},{"name":"N4-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"}],"termid":"GO:0033990"}


id: GO:0047746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyll + H2O = phytol + chlorophyllide.","definition_xrefs":["EC:3.1.1.14","MetaCyc:CHLOROPHYLLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chlorophyllase activity","synonyms":[{"name":"chlorophyll chlorophyllidohydrolase activity","type":"related"}],"termid":"GO:0047746"}


id: GO:2000533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal albumin absorption","termid":"GO:2000532"},{"relation_name":"negatively_regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal albumin absorption","termid":"GO:2000533"}


id: PBO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 6","termid":"PBO:0072076"}


id: PBO:0083758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential Fe-S protein; required for ribosome biogenesis, translation initiation/termination; facilitates binding of multifactor complex (MFC) of initiation factors to small ribosomal subunit; Dom34-Hbs1 complex and Rli1p work in dissociating inactive ribosomes, thereby facilitating translation restart; forms complex with Lto1p and Yae1p; dependency on ROS-labile FeS clusters, activity in nuclear ribosomal-subunit export impaired by mild oxidative stress","termid":"PBO:0083758"}


id: FYPO:0000288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype that affects the regulation of gene expression.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"gene expression regulation phenotype","synonyms":[{"name":"fission yeast gene expression regulation phenotype","type":"exact"}],"termid":"FYPO:0000288"}


id: PBO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 3","termid":"PBO:0045462"}


id: GO:0044850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of ovulation cycle where the endometrium is shed if pregnancy does not occur.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstrual cycle","secondary_identifiers":["Wikipedia:Menstrual_cycle"],"termid":"GO:0044850"}


id: PBO:0085672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; possible role in assembly of the dityrosine layer; similar to adjacent ORF, LOH1; irc18 loh1 double mutant exhibits reduced dityrosine fluorescence relative to single mutants; SWAT-GFP fusion protein localizes to the ER and vacuole, while mCherry fusion localizes to the vacuole; expression induced in respiratory-deficient cells and carbon-limited chemostat culture; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0085672"}


id: PBO:0034496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034496"}


id: SO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 23S rRNA is an RNA component of the large subunit of cytosolic ribosomes in prokaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_23S_gene","termid":"SO:0002243"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_23S_rRNA","synonyms":[{"name":"cytosolic 23S LSU rRNA","type":"exact"},{"name":"cytosolic 23S rRNA","type":"exact"},{"name":"cytosolic 23S ribosomal RNA","type":"related"},{"name":"cytosolic rRNA 23S","type":"exact"}],"termid":"SO:0001001"}


id: PBO:0085382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter mediates export of many different organic anions including oligomycin; homolog of human cystic fibrosis transmembrane receptor (CFTR)","termid":"PBO:0085382"}


id: GO:0180037
data:
  {"annotated_genes":["SJAG_02275","SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91104,111653],"is_not":false,"summary":null,"term":"GO:0180037"}]},"cv_name":"biological_process","definition":"A cytoplasmic tRNA surveillance pathway that targets mature hypomodified tRNAs, catalyzed by 5'-3' exonucleases Xrn1 (S. cerevisiae/human) and Rat1 (S. cerevisiae) XRN2 human, and regulated by adenosine 3',5' bisphosphate (pAp).","definition_xrefs":["PMID:35901126","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA surveillance","termid":"GO:0106354"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01702":null,"SJAG_02275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"rapid tRNA decay","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180037","terms_by_termid":{"GO:0180037":null}}


id: PBO:0076787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase pseudogene 1","termid":"PBO:0076787"}


id: PBO:0109011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 11, pseudogene","termid":"PBO:0109011"}


id: FYPO:0001123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore shape","termid":"FYPO:0002467"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated spore","synonyms":[{"name":"long spores","type":"exact"}],"termid":"FYPO:0001123"}


id: PBO:0053979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1291","termid":"PBO:0053979"}


id: GO:0009352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Complex that possesses dihydrolipoyl dehydrogenase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoyl dehydrogenase complex (obsolete GO:0009352)","synonyms":[{"name":"dihydrolipoamide dehydrogenase complex","type":"exact"},{"name":"dihydrolipoyl dehydrogenase complex","type":"exact"}],"termid":"GO:0009352"}


id: GO:0016252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any function that supports transcription of genes by RNA polymerase II, and is not specific to a particular gene or gene set.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nonspecific RNA polymerase II transcription factor activity (obsolete GO:0016252)","synonyms":[{"name":"nonspecific RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0016252"}


id: GO:1903983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microvillus length","synonyms":[{"name":"activation of regulation of microvillus length","type":"narrow"},{"name":"up regulation of regulation of microvillus length","type":"exact"},{"name":"up-regulation of regulation of microvillus length","type":"exact"},{"name":"upregulation of regulation of microvillus length","type":"exact"}],"termid":"GO:1903983"}


id: GO:0001181
data:
  {"annotated_genes":["SJAG_00421","SJAG_04766","SJAG_05331","SJAG_04083","SJAG_01712","SJAG_02813","SJAG_01744","SJAG_00202","SJAG_02747","SJAG_00692"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87505,87506,89309,91555,91730,101384,103812,105278,105864,108059,108060,112572],"is_not":false,"summary":null,"term":"GO:0001181"}]},"cv_name":"molecular_function","definition":"A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase I. Factors required for RNA polymerase I transcription initiation include upstream activation factor (UAF), core factor (CF), TATA binding protein (TBP) and RRN3. In all species characterized, RNA polymerase I transcribes a large polycistronic transcript that is processed into several mature rRNAs (3 or 4 depending on the species), including the large subunit rRNA (28S in humans), the small subunit rRNA (18S in humans), as well as one or two additional smaller rRNAs (the 5.8S rRNA in humans). In most species, this large rRNA transcript is the sole product of RNA polymerase I. However there are rare exceptions, such as Trypanosoma brucei, where RNA polymerase I also transcribes certain mRNAs.","definition_xrefs":["PMID:25346433","PMID:11500378","PMID:28340337","PMID:31358304","PMID:28842442","PMID:17972917","GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor activity","termid":"GO:0140223"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00202":null,"SJAG_00421":null,"SJAG_00692":null,"SJAG_01712":null,"SJAG_01744":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_04083":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140223"}],"interesting_parent_ids":["GO:0003674","GO:0140223"],"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase I transcription general initiation factor activity","type":"exact"},{"name":"core RNA polymerase I binding transcription factor activity","type":"broad"},{"name":"general RNA polymerase I transcription factor activity","type":"exact"},{"name":"transcription factor activity, core RNA polymerase I binding","type":"broad"}],"termid":"GO:0001181","terms_by_termid":{"GO:0001181":null}}


id: PBO:0042292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 epsilon subunit of T-cell receptor complex","termid":"PBO:0042292"}


id: GO:0103082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + acetyl-CoA + H2O = H+ + 2-(4'-methylthio)butylmalate + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"2-(4'-methylthio)butylmalate synthase activity","secondary_identifiers":["MetaCyc:RXNQT-4166"],"termid":"GO:0103082"}


id: PBO:0043958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma C","termid":"PBO:0043958"}


id: GO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-aconitate = cis-aconitate.","definition_xrefs":["RHEA:17265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"aconitate delta-isomerase activity","secondary_identifiers":["EC:5.3.3.7","MetaCyc:ACONITATE-DELTA-ISOMERASE-RXN","KEGG_REACTION:R02244"],"synonyms":[{"name":"aconitate D-isomerase activity","type":"exact"},{"name":"aconitate delta2-delta3-isomerase activity","type":"related"},{"name":"aconitate isomerase activity","type":"broad"}],"termid":"GO:0047614"}


id: PBO:0058495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR5689 host gene","termid":"PBO:0058495"}


id: PBO:0083823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Dam1p and Pse1p to connect the DASH complex with microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083823"}


id: PBO:0091206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu","termid":"PBO:0091206"}


id: GO:0045745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G protein-coupled receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G protein-coupled receptor signaling pathway","synonyms":[{"name":"activation of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"positive regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"positive regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"positive regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"positive regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"positive regulation of G-protein-coupled receptor protein signaling pathway","type":"exact"},{"name":"positive regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"positive regulation of GPCR protein signaling pathway","type":"exact"},{"name":"positive regulation of GPCR protein signalling pathway","type":"exact"},{"name":"stimulation of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"up regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"up-regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"upregulation of G-protein coupled receptor protein signaling pathway","type":"exact"}],"termid":"GO:0045745"}


id: PBO:0049800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5B","termid":"PBO:0049800"}


id: PBO:0089175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23","termid":"PBO:0089175"}


id: GO:0019295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"coenzyme M metabolic process","termid":"GO:0019296"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"coenzyme M biosynthetic process","secondary_identifiers":["MetaCyc:P261-PWY"],"synonyms":[{"name":"coenzyme M anabolism","type":"exact"},{"name":"coenzyme M biosynthesis","type":"exact"},{"name":"coenzyme M formation","type":"exact"},{"name":"coenzyme M synthesis","type":"exact"}],"termid":"GO:0019295"}


id: PBO:0090686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex CAF1 family ribonuclease subunit 7/8","termid":"PBO:0090686"}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["PMID:11282471","ISBN:0124325653","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: PBO:0044021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 3","termid":"PBO:0044021"}


id: FYPO:0005555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin loading is decreased during the mitotic cell cycle. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["PomBase:mah","GO:0061780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic cohesin loading","synonyms":[{"name":"decreased cohesin loading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin loading during vegetative growth","type":"exact"},{"name":"decreased mitotic cohesin association with chromatin","type":"exact"},{"name":"decreased mitotic cohesin localization to chromatin","type":"exact"},{"name":"reduced mitotic cohesin loading","type":"exact"}],"termid":"FYPO:0005555"}


id: GO:0051114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine) or peptidyl-3'-(phospho-5'-uridine)-L-histidine (otherwise known as pi-UMP-histidine, pros-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein uridylylation","termid":"GO:0018177"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine uridylylation","termid":"GO:0051114"}


id: PBO:0025438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-56 Par2","termid":"PBO:0025438"}


id: PATO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000680 absolute temporal value (obsolete PATO:0000680)","termid":"PATO:0000680"}


id: PBO:0062741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 8","termid":"PBO:0062741"}


id: PBO:0109383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 14","termid":"PBO:0109383"}


id: PBO:0053146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 2","termid":"PBO:0053146"}


id: PR:O42709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc23 gene.","definition_xrefs":["UniProtKB:O42709","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.10","synonyms":[{"name":"Spom972h-cdc23","type":"exact"},{"name":"cdc23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42709"}


id: PBO:0090838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH tandem zinc finger protein, human Tristetraprolin homolog Zfs1, involved in mRNA catabolism","termid":"PBO:0090838"}


id: PBO:0068393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 213","termid":"PBO:0068393"}


id: GO:0140102
data:
  {"annotated_genes":["SJAG_02024","SJAG_03713","SJAG_03332","SJAG_03755","SJAG_02281","SJAG_02350","SJAG_03289","SJAG_03877","SJAG_03016","SJAG_00943","SJAG_03008","SJAG_01958","SJAG_02821","SJAG_02417","SJAG_00722","SJAG_03773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[88419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106388"},{"annotations":[91335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[83613,94993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016433"},{"annotations":[94551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[109742,91769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[91046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[85803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[87470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070037"},{"annotations":[104504,85804,97473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[112326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"},{"annotations":[104220,106327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008649"}]},"cv_name":"molecular_function","definition":"Catalytic activity that acts to modify a ribosomal RNA.","definition_xrefs":["GOC:pdt","GOC:molecular_function_refactoring"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00943":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03713":null,"SJAG_03755":null,"SJAG_03773":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"catalytic activity, acting on a rRNA","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0140102","terms_by_termid":{"GO:0000179":null,"GO:0008649":null,"GO:0008650":null,"GO:0009383":null,"GO:0016433":null,"GO:0052907":null,"GO:0052909":null,"GO:0070037":null,"GO:0070039":null,"GO:0070042":null,"GO:0070043":null,"GO:0106142":null,"GO:0106388":null}}


id: PBO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 20","termid":"PBO:0075164"}


id: PBO:0034142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_regulogy_relationship_with","termid":"PBO:0034142"}


id: PBO:0080730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC2 antisense RNA 2","termid":"PBO:0080730"}


id: PBO:0017705
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDC43","termid":"PBO:0017705"}


id: FYPO:0006627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"normal 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"normal plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"normal plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"}],"termid":"FYPO:0006627"}


id: PBO:0050711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 9","termid":"PBO:0050711"}


id: PBO:0071479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 20","termid":"PBO:0071479"}


id: GO:0045496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the analia of the male over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia development","termid":"GO:0045496"}


id: PBO:0066139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 divergent transcript","termid":"PBO:0066139"}


id: PBO:0027400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_triglyceride_biosynthetic_process","termid":"PBO:0027400"}


id: PBO:0083227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR045C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083227"}


id: GO:0010468
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id: GO:0021805
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id: PBO:0048429
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id: PATO:0002341
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id: GO:0002429
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id: GO:1902785
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id: PBO:0039214
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id: PBO:0041680
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id: GO:0052093
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id: GO:0072154
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id: PBO:0067964
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id: PBO:0068915
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id: GO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"positive regulation of interleukin-1 production","termid":"GO:0032732"},{"relation_name":"positively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050718","GO:0050725"],"synonyms":[{"name":"activation of interleukin-1 beta production","type":"narrow"},{"name":"positive regulation of IL-1 beta production","type":"exact"},{"name":"positive regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 beta secretion","type":"narrow"},{"name":"stimulation of interleukin-1 beta production","type":"narrow"},{"name":"up regulation of interleukin-1 beta production","type":"exact"},{"name":"up-regulation of interleukin-1 beta production","type":"exact"},{"name":"upregulation of interleukin-1 beta production","type":"exact"}],"termid":"GO:0032731"}


id: GO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hepatocyte growth factor","synonyms":[{"name":"response to HGF stimulus","type":"exact"},{"name":"response to hepatocyte growth factor stimulus","type":"exact"}],"termid":"GO:0035728"}


id: PR:O14223
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tvp15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.04","synonyms":[{"name":"Spom972h-tvp15","type":"exact"}],"termid":"PR:O14223"}


id: GO:0051031
data:
  {"annotated_genes":["SJAG_04083","SJAG_04622","SJAG_02661","SJAG_03156","SJAG_00178","SJAG_03358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109655,101383,108118,85526,101857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[95669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[109656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of tRNA, transfer ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_02661":null,"SJAG_03156":null,"SJAG_03358":null,"SJAG_04083":null,"SJAG_04622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tRNA transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051031","terms_by_termid":{"GO:0006409":null,"GO:0016031":null,"GO:0071528":null}}


id: PBO:0077187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 10","termid":"PBO:0077187"}


id: PBO:0081254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF24 transcription regulator","termid":"PBO:0081254"}


id: GO:0010018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing of far red light by a photoreceptor molecule. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:sm","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"},{"relation_name":"is_a","term_name":"cellular response to far red light","termid":"GO:0071490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"far-red light signaling pathway","synonyms":[{"name":"far red light signalling pathway","type":"exact"},{"name":"far red signaling pathway","type":"exact"},{"name":"far-red light signal transduction","type":"exact"}],"termid":"GO:0010018"}


id: PR:O42933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.09","secondary_identifiers":["UniProtKB:O42933"],"synonyms":[{"name":"SPBC16C6.09","type":"related"},{"name":"Spom972h-POMT1","type":"exact"},{"name":"oma4","type":"related"}],"termid":"PR:O42933"}


id: PATO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000667 liquid substance value (obsolete PATO:0000667)","termid":"PATO:0000667"}


id: GO:0016482
data:
  {"annotated_genes":["SJAG_00380","SJAG_02282","SJAG_04338","SJAG_02177","SJAG_00287","SJAG_01039","SJAG_02750","SJAG_02852","SJAG_01488","SJAG_00632","SJAG_03756","SJAG_00143","SJAG_04822","SJAG_02811","SJAG_04359","SJAG_02193","SJAG_04275","SJAG_03504","SJAG_03963","SJAG_01645","SJAG_03005","SJAG_00971","SJAG_02912","SJAG_04966","SJAG_04552","SJAG_05030","SJAG_01598","SJAG_02277","SJAG_04565","SJAG_01809","SJAG_02823","SJAG_02240","SJAG_04219","SJAG_04609","SJAG_01448","SJAG_04629","SJAG_00314","SJAG_04902","SJAG_01027","SJAG_04023","SJAG_06588","SJAG_00379","SJAG_04112"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111341,112547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034498"},{"annotations":[109130,97245,113080,88427,100192,91039,96379,85329,96438,97688,96034,103488,114517,114587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006895"},{"annotations":[108582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034499"},{"annotations":[88430,94337,91090,99561,108907,93024,98261,114966,109132,95893,87346,85568,101643,103680,105933,93297,94824,88457,91932,113082,114498,93892,114588,105300,97838,98789,91243,103112,97257,115098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042147"}]},"cv_name":"biological_process","definition":"The directed movement of substances or organelles within the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00287":null,"SJAG_00314":null,"SJAG_00379":null,"SJAG_00380":null,"SJAG_00632":null,"SJAG_00971":null,"SJAG_01027":null,"SJAG_01039":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02193":null,"SJAG_02240":null,"SJAG_02277":null,"SJAG_02282":null,"SJAG_02750":null,"SJAG_02811":null,"SJAG_02823":null,"SJAG_02852":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03504":null,"SJAG_03756":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04219":null,"SJAG_04275":null,"SJAG_04338":null,"SJAG_04359":null,"SJAG_04552":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04629":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04966":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cytosolic transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016482","terms_by_termid":{"GO:0006895":null,"GO:0034498":null,"GO:0034499":null,"GO:0042147":null}}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"C1r esterase activity","type":"related"},{"name":"activated complement C1r","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


id: GO:0016265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism.","definition_xrefs":["GOC:mah","ISBN:0877797099","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete death (obsolete GO:0016265)","secondary_identifiers":["Wikipedia:Death"],"termid":"GO:0016265"}


id: PBO:0030611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha-glucan_level","termid":"PBO:0030611"}


id: GO:0071938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement any form of vitamin A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Vitamin A is any of several retinoid derivatives of beta-carotene, primarily retinol, retinal, or retinoic acid.","definition_xrefs":["GOC:mah","PMID:1924551","PMID:16011460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vitamin A transport","synonyms":[{"name":"vitamin A uptake and transport","type":"related"}],"termid":"GO:0071938"}


id: GO:0098658
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of inorganic anions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"},{"relation_name":"is_a","term_name":"inorganic ion import across plasma membrane","termid":"GO:0099587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"inorganic anion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inorganic anion import into cell","type":"exact"}],"termid":"GO:0098658","terms_by_termid":{"GO:1902434":null}}


id: GO:0005391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in).","definition_xrefs":["EC:7.2.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type sodium transporter activity","termid":"GO:0008554"},{"relation_name":"is_a","term_name":"P-type potassium transmembrane transporter activity","termid":"GO:0008556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type sodium:potassium-exchanging transporter activity","secondary_identifiers":["Reactome:R-HSA-936897","TC:3.A.3.1.1","Wikipedia:ATPase\\,_Na%2B/K%2B_transporting\\,_alpha_1","RHEA:18353","MetaCyc:3.6.3.9-RXN"],"synonyms":[{"name":"Na(+)/K(+)-ATPase activity","type":"related"},{"name":"Na(+)/K(+)-exchanging ATPase activity","type":"related"},{"name":"Na+,K+-ATPase activity","type":"related"},{"name":"Na+/K+-ATPase activity","type":"related"},{"name":"Na+/K+-exchanging ATPase activity","type":"related"},{"name":"Na,K-activated ATPase activity","type":"related"},{"name":"P-type sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"sodium pump","type":"broad"},{"name":"sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:0005391"}


id: GO:0072750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to leptomycin B","termid":"GO:1901344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptomycin B","termid":"GO:0072750"}


id: PBO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 5","termid":"PBO:0048613"}


id: FYPO:0005013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 8 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H4-K8 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H4-K8 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K8 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K8 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005013"}


id: PR:Q10144
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H8.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C3H8.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.08c","synonyms":[{"name":"Spom972h-SPAC3H8.08c","type":"exact"}],"termid":"PR:Q10144"}


id: PBO:0030296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cell_cortex","termid":"PBO:0030296"}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: GO:0042946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glucoside transport","termid":"GO:0042946"}


id: PBO:0042343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD80 molecule","termid":"PBO:0042343"}


id: MOD:00817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan.","definition_xrefs":["PubMed:8168130","PubMed:16407988","RESID:AA0408","ChEBI:35304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"isoprenylated tryptophan","termid":"MOD:01115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","synonyms":[{"name":"(2S,3R)-3-geranyl-2,3-dihydro-2,N(alpha)-cyclo-L-tryptophan","type":"exact"},{"name":"(2S,3aR,8aS)-3a-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-1,2,3,3a,8,8a-hexahydropyrrolo[2,3-b]indole-2-carboxylic acid","type":"exact"},{"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","type":"exact"},{"name":"3'Ger2'N2cycTrp","type":"exact"},{"name":"LIPID 3'-geranyl-2',N2-cyclotryptophan","type":"exact"}],"termid":"MOD:00817"}


