# terms

id: GO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-methionine = S-adenosyl-L-homocysteine + S-methyl-L-methionine.","definition_xrefs":["EC:2.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"methionine S-methyltransferase activity","secondary_identifiers":["MetaCyc:METHIONINE-S-METHYLTRANSFERASE-RXN","RHEA:13761"],"synonyms":[{"name":"S-adenosyl methionine:methionine methyl transferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-methionine S-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-methionine methyltransferase activity","type":"related"},{"name":"methionine methyltransferase activity","type":"related"}],"termid":"GO:0030732"}


id: PBO:0013438
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe FLocculin","termid":"PBO:0013438"}


id: FYPO:0008185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in the centromere central core occurs to a lower extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere central core during vegetative growth","termid":"FYPO:0008185"}


id: PBO:0003990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E1-like activator enzyme Fub2 (predicted)","termid":"PBO:0003990"}


id: PBO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 2","termid":"PBO:0043985"}


id: PBO:0066039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 8","termid":"PBO:0066039"}


id: GO:0102671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-6a-hydroxymaackiain + S-adenosyl-L-methionine = H+ + (+)-pisatin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6a-hydroxymaackiain-3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4002","RHEA:35471"],"termid":"GO:0102671"}


id: PBO:0048317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 28","termid":"PBO:0048317"}


id: PBO:0027468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endocytosis","termid":"PBO:0027468"}


id: PBO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rbp28","termid":"PBO:0002448"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: GO:0101024
data:
  {"annotated_genes":["SJAG_04489","SJAG_03783","SJAG_00900","SJAG_05207","SJAG_00416","SJAG_03891","SJAG_03449","SJAG_01050","SJAG_03892","SJAG_04464","SJAG_01745","SJAG_00680","SJAG_03073","SJAG_01242"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107132,115218,115282,115591],"is_not":false,"summary":null,"term":"GO:0101024"},{"annotations":[89982,97559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140515"},{"annotations":[115507,92112,102678,115505,87491,97017,94103,84149,99273,99860,115504,115506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis.","definition_xrefs":["GOC:vw","PMID:15147872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03073":null,"SJAG_03449":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear membrane organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear membrane organization involved in mitotic nuclear division","type":"exact"}],"termid":"GO:0101024","terms_by_termid":{"GO:0007084":null,"GO:0101024":null,"GO:0140515":null}}


id: PBO:0061090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK3 homeobox 1","termid":"PBO:0061090"}


id: GO:0072451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about cell size is received and converted into a molecular signal, contributing to a G2/M transition size control checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in G2 cell size control checkpoint (obsolete GO:0072451)","synonyms":[{"name":"G2/M transition size control checkpoint sensor mechanism","type":"related"},{"name":"G2/M transition size control checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in G2/M transition size control checkpoint","type":"exact"},{"name":"detection of stimulus involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"},{"name":"sensing involved in G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0072451"}


id: PBO:0017593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family Vps74 (predicted)","termid":"PBO:0017593"}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: PBO:0054281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1672","termid":"PBO:0054281"}


id: PBO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains IDP (GATA)","termid":"PBO:0003817"}


id: PBO:0066301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 3","termid":"PBO:0066301"}


id: GO:0097755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of blood vessel diameter (obsolete GO:0097755)","synonyms":[{"name":"positive regulation of vasodilation","type":"related"}],"termid":"GO:0097755"}


id: PBO:0075696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 1","termid":"PBO:0075696"}


id: GO:0140240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse of a pyramidal neuron in the entorhinal cortex onto a granule cell in the dentate gyrus of the hippocampus.","definition_xrefs":["PMID:22727665","PMID:29199135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perforant pathway to dendrate granule cell synapse","synonyms":[{"name":"perforant pathway to DG granule cell synapse","type":"exact"}],"termid":"GO:0140240"}


id: PBO:0091996
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter located -692--679","termid":"PBO:0091996"}


id: PR:G2TRU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc2 gene.","definition_xrefs":["UniProtKB:G2TRU5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX assembly mitochondrial protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.20","synonyms":[{"name":"Cx9C motif-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cmc2","type":"exact"}],"termid":"PR:G2TRU5"}


id: PBO:0066435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RE1 silencing transcription factor","termid":"PBO:0066435"}


id: GO:0065010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular membrane-bounded organelle","synonyms":[{"name":"extracellular membrane-enclosed organelle","type":"exact"}],"termid":"GO:0065010"}


id: FYPO:0006681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:19111658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006681"}


id: PBO:0091451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine nucleoside glycosylase Qng1","termid":"PBO:0091451"}


id: PBO:0072800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 6","termid":"PBO:0072800"}


id: PBO:0039239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated leukocyte cell adhesion molecule","termid":"PBO:0039239"}


id: PBO:0047172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 5","termid":"PBO:0047172"}


id: PBO:0043107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 8 pseudogene 1","termid":"PBO:0043107"}


id: PBO:0043220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin binding box of aftiphilin containing 1","termid":"PBO:0043220"}


id: PATO:0001901
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces south.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"back","termid":"PATO:0001901"}


id: GO:0019909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates of the activity of [pyruvate dehydrogenase (lipoamide)] phosphatase.","definition_xrefs":["GOC:ai","EC:3.1.3.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase regulator activity","synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019909"}


id: GO:0033995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acetylneuraminate glycoside = 2,7-anhydro-alpha-N-acetylneuraminate + an alpha-sialyl group. This reaction is the elimination of alpha-sialyl groups in N-acetylneuraminic acid glycosides, releasing 2,7-anhydro-alpha-N-acetylneuraminate.","definition_xrefs":["EC:4.2.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anhydrosialidase activity","secondary_identifiers":["MetaCyc:4.2.2.15-RXN"],"synonyms":[{"name":"anhydroneuraminidase activity","type":"related"},{"name":"glycoconjugate sialyl-lyase (2,7-cyclizing) activity","type":"related"},{"name":"sialglycoconjugate N-acylneuraminylhydrolase (2,7-cyclizing) activity","type":"related"},{"name":"sialidase L activity","type":"related"}],"termid":"GO:0033995"}


id: PBO:0041476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 65","termid":"PBO:0041476"}


id: SO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of DNA that originates from a an organelle.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organelle_sequence","synonyms":[{"name":"organelle sequence","type":"exact"}],"termid":"SO:0000736"}


id: FYPO:0005611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 occurs to a greater extent than normal in the region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased H4-K20 dimethylation at double-strand break site during vegetative growth","synonyms":[{"name":"increased H4-K20 dimethylation at DSB during vegetative growth","type":"exact"},{"name":"increased H4K20me2 at double-strand break site during vegetative growth","type":"exact"},{"name":"increased histone H4-K20 dimethylation at double-strand break site during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K20 dimethylation at double-strand break site during vegetative growth","type":"exact"},{"name":"increased histone H4-K20 dimethylation at site of double-strand break during vegetative growth","type":"exact"},{"name":"increased histone lysine H4-K20 dimethylation at double-strand break site during vegetative growth","type":"exact"}],"termid":"FYPO:0005611"}


id: FYPO:0005397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0006886","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport during vegetative growth","termid":"FYPO:0004848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal intracellular protein transport during vegetative growth","synonyms":[{"name":"normal intracellular protein transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005397"}


id: PR:Q09712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi18 gene.","definition_xrefs":["UniProtKB:Q09712","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.05","synonyms":[{"name":"GPI mannosyltransferase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpi18","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09712"}


id: PBO:0044512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and tyrosine rich 1","termid":"PBO:0044512"}


id: PBO:0043424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit alpha 2","termid":"PBO:0043424"}


id: PBO:0041278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 4","termid":"PBO:0041278"}


id: PBO:0089317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body associated protein Pby1","termid":"PBO:0089317"}


id: PBO:0059196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X3","termid":"PBO:0059196"}


id: GO:0140203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of spermidine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine import across plasma membrane","termid":"GO:0140202"},{"relation_name":"is_a","term_name":"spermidine transmembrane transport","termid":"GO:1903711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"spermidine import across plasma membrane","termid":"GO:0140203"}


id: PR:O94597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.07 gene.","definition_xrefs":["UniProtKB:O94597","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.07","synonyms":[{"name":"Spom972h-SPCC622.07","type":"exact"}],"termid":"PR:O94597"}


id: PBO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Sme1","termid":"PBO:0003764"}


id: PBO:0045913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 9","termid":"PBO:0045913"}


id: PBO:0024832
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYosin II of Pombe","termid":"PBO:0024832"}


id: PBO:0002730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx1","termid":"PBO:0002730"}


id: PBO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1","termid":"PBO:0003182"}


id: PBO:0038471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA9 antisense RNA 1","termid":"PBO:0038471"}


id: GO:0071913
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87924],"is_not":false,"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of citrate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:vw","GOC:mah","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylate secondary active transmembrane transporter activity","termid":"GO:0005371"},{"relation_name":"is_a","term_name":"citrate transmembrane transporter activity","termid":"GO:0015137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"citrate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrate carrier activity","type":"exact"}],"termid":"GO:0071913","terms_by_termid":{"GO:0071913":null}}


id: GO:1901122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bacitracin A.","definition_xrefs":["UniPathway:UPA00179","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A metabolic process","synonyms":[{"name":"bacitracin A metabolism","type":"exact"}],"termid":"GO:1901122"}


id: PBO:0069119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 368, pseudogene","termid":"PBO:0069119"}


id: RO:0009005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"'has primary substance added' indicates that an entity has had the given substance added to it in a proportion greater than any other added substance.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_substance_added","termid":"RO:0009001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_primary_substance_added","termid":"RO:0009005"}


id: CHEBI:27365
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion","termid":"CHEBI:27365"}


id: GO:0031172
data:
  {"annotated_genes":["SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90259],"is_not":false,"summary":null,"term":"GO:0031172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + O2 + H+ = N5-hydroxy-L-ornithine + H2O.","definition_xrefs":["MetaCyc:RXN-11128","PMID:12828635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ornithine N5-monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:41508"],"synonyms":[{"name":"L-ornithine 5-monooxygenase activity","type":"exact"}],"termid":"GO:0031172","terms_by_termid":{"GO:0031172":null}}


id: PBO:0027849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027849"}


id: PBO:0081571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 497","termid":"PBO:0081571"}


id: GO:0141171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont effects a change that impairs the structure or function of a host membrane. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28855258","PMID:14688136","PMID:17043230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host membrane","synonyms":[{"name":"symbiont-mediated disruption of host membrane","type":"narrow"}],"termid":"GO:0141171"}


id: SO:1000030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal mutation where a region of the chromosome is inverted with respect to wild type.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_inversion","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_inversion"],"synonyms":[{"name":"(Drosophila)In","type":"related"},{"name":"(bacteria)IN","type":"related"},{"name":"(fungi)In","type":"related"},{"name":"chromosomal inversion","type":"exact"}],"termid":"SO:1000030"}


id: PBO:0046635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 16","termid":"PBO:0046635"}


id: PBO:0094356
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"community_curated","termid":"PBO:0094356"}


id: PBO:0062776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 4","termid":"PBO:0062776"}


id: GO:0102700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = alpha-thujene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"alpha-thujene synthase activity","secondary_identifiers":["MetaCyc:RXN-5105"],"termid":"GO:0102700"}


id: FYPO:0004479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased during a cellular response to salt stress.","definition_xrefs":["PMID:16928959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to salt stress","synonyms":[{"name":"decreased transcription from CDRE promoter during cellular response to salt stress","type":"exact"},{"name":"decreased transcription from CDRE promoter in response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to salt stress during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to salt stress","type":"exact"}],"termid":"FYPO:0004479"}


id: GO:0034294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a sexual spore wall, the specialized envelope lying outside the cell membrane of a spore derived from a product of meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"sexual sporulation","termid":"GO:0034293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"sexual spore wall assembly","synonyms":[{"name":"sexual spore wall formation","type":"exact"}],"termid":"GO:0034294"}


id: PBO:0054484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1884","termid":"PBO:0054484"}


id: PBO:0067241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 313, pseudogene","termid":"PBO:0067241"}


id: PATO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer being shaped like a scute or an osteoderm.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scute-like","termid":"PATO:0002520"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: FYPO:0006694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during G0","termid":"FYPO:0003871"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K4 trimethylation during G0","synonyms":[{"name":"decreased histone H3 K4 trimethylation during G0","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during cell quiescence","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during quiescence","type":"exact"},{"name":"decreased histone H3K4 trimethylation during G0","type":"exact"},{"name":"decreased histone H3K4me3 during G0","type":"exact"},{"name":"decreased histone lysine H3 K4 trimethylation during G0","type":"exact"},{"name":"reduced histone H3-K4 trimethylation during G0","type":"exact"}],"termid":"FYPO:0006694"}


id: PBO:0041294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 2","termid":"PBO:0041294"}


id: GO:0044388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a small protein activating enzyme, such as ubiquitin-activating enzyme.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"small protein activating enzyme binding","termid":"GO:0044388"}


id: PBO:0064814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 5","termid":"PBO:0064814"}


id: PBO:0039745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L domain containing 1","termid":"PBO:0039745"}


id: PBO:0044370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoglobin","termid":"PBO:0044370"}


id: PBO:0055546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2982","termid":"PBO:0055546"}


id: PBO:0080409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37C subunit of ESCRT-I","termid":"PBO:0080409"}


id: PBO:0065591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 7","termid":"PBO:0065591"}


id: GO:0103030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + methylglyoxal + NADH = hydroxyacetone + NAD.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ethylglyoxal reductase (NADH-dependent, hydroxyacetone-forming) activity (obsolete GO:0103030)","termid":"GO:0103030"}


id: MOD:00326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-pyrrolysine (not known as a natural, post-translational modification process).","definition_xrefs":["Unimod:435#K","PubMed:12029131","PubMed:11435424","PubMed:12029132","PubMed:15314242","PubMed:16096277","RESID:AA0321#LYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"L-pyrrolysine residue","termid":"MOD:01187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine (Lys)","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl(Lys)","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:00326"}


id: GO:0042182
data:
  {"annotated_genes":["SJAG_01596","SJAG_04726","SJAG_04674","SJAG_02106","SJAG_04404","SJAG_02960","SJAG_02988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98923,84166,88584,96452,108932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[60525,58844,101152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"ketone catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ketone breakdown","type":"exact"},{"name":"ketone catabolism","type":"exact"},{"name":"ketone degradation","type":"exact"}],"termid":"GO:0042182","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: GO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress involved in replicative cell aging (obsolete GO:0001322)","synonyms":[{"name":"age-dependent response to oxidative stress during replicative cell ageing","type":"related"},{"name":"age-dependent response to oxidative stress during replicative cell aging","type":"related"}],"termid":"GO:0001322"}


id: PBO:0073544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 2","termid":"PBO:0073544"}


id: PBO:0060492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 3","termid":"PBO:0060492"}


id: PBO:0077128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulointerstitial nephritis antigen like 1","termid":"PBO:0077128"}


id: GO:0046477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"},{"relation_name":"is_a","term_name":"glycosphingolipid catabolic process","termid":"GO:0046479"},{"relation_name":"is_a","term_name":"ceramide catabolic process","termid":"GO:0046514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glycosylceramide catabolic process","synonyms":[{"name":"glycosylceramide breakdown","type":"exact"},{"name":"glycosylceramide catabolism","type":"exact"},{"name":"glycosylceramide degradation","type":"exact"}],"termid":"GO:0046477"}


id: GO:0110125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myotube cell migration.","definition_xrefs":["GOC:ha","PMID:29122742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of myotube cell migration","termid":"GO:0110123"},{"relation_name":"negatively_regulates","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube cell migration","termid":"GO:0110125"}


id: PBO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 27","termid":"PBO:0070848"}


id: GO:0033840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NDP-glucose + (1,4-alpha-D-glucosyl)n = NDP + (1,4-alpha-D-glucosyl)n+1.","definition_xrefs":["EC:2.4.1.242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"NDP-glucose-starch glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.242-RXN","RHEA:15873"],"synonyms":[{"name":"GBSS","type":"related"},{"name":"GBSSI","type":"related"},{"name":"GBSSII","type":"related"},{"name":"NDP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"NDPglucose-starch glucosyltransferase activity","type":"related"},{"name":"granule-bound starch synthase I activity","type":"related"},{"name":"granule-bound starch synthase II activity","type":"related"},{"name":"granule-bound starch synthase activity","type":"related"},{"name":"starch granule-bound nucleoside diphosphate glucose-starch glucosyltransferase activity","type":"related"},{"name":"starch synthase II activity","type":"related"},{"name":"waxy protein","type":"related"}],"termid":"GO:0033840"}


id: PBO:0073159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61G divergent transcript","termid":"PBO:0073159"}


id: FYPO:0004238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K4 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004238"}


id: PBO:0034203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by_part_of","termid":"PBO:0034203"}


id: PBO:0066770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 68","termid":"PBO:0066770"}


id: PBO:0044536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMT1-associated long intergenic non-coding RNA","termid":"PBO:0044536"}


id: PBO:0046751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5 pseudogene 1","termid":"PBO:0046751"}


id: PBO:0074129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 1 pseudogene 1","termid":"PBO:0074129"}


id: PBO:0043213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 6","termid":"PBO:0043213"}


id: PBO:0028690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore-specific_spindle_pole_body_remodeling","termid":"PBO:0028690"}


id: PBO:0026899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026899"}


id: PBO:0068878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 118, pseudogene","termid":"PBO:0068878"}


id: GO:0000763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that occurs during sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo unidirectional conjugation.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cell morphogenesis involved in unidirectional conjugation (obsolete GO:0000763)","synonyms":[{"name":"cell morphogenesis involved in unidirectional conjugation","type":"exact"}],"termid":"GO:0000763"}


id: FYPO:0004455
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to nucleus","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050"],"single_locus_genotype_uniquenames":["nur1delta"],"synonyms":[{"name":"decreased protein localisation to nucleus","type":"exact"},{"name":"reduced protein localization to nucleus","type":"exact"}],"termid":"FYPO:0004455","terms_by_termid":{"FYECO:0000137":null,"FYPO:0007073":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0008677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantoate + NADP+ = 2-dehydropantoate + H+ + NADPH.","definition_xrefs":["RHEA:16233","EC:1.1.1.169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-dehydropantoate 2-reductase activity","secondary_identifiers":["MetaCyc:2-DEHYDROPANTOATE-REDUCT-RXN","KEGG_REACTION:R02472"],"synonyms":[{"name":"(R)-pantoate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"2-ketopantoate reductase activity","type":"related"},{"name":"2-ketopantoic acid reductase activity","type":"related"},{"name":"2-oxopantoate reductase activity","type":"related"},{"name":"KPA reductase activity","type":"related"},{"name":"ketopantoate reductase activity","type":"related"},{"name":"ketopantoic acid reductase activity","type":"related"}],"termid":"GO:0008677"}


id: PBO:0058393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4765","termid":"PBO:0058393"}


id: PBO:0051537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 5","termid":"PBO:0051537"}


id: PATO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000811 visual value (obsolete PATO:0000811)","termid":"PATO:0000811"}


id: PBO:0053410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 347","termid":"PBO:0053410"}


id: GO:1903149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any adenine transmembrane transporter activity that is involved in adenine import into cell.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","ISBN:0-8249-3695-6","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine transmembrane transporter activity involved in adenine import into cell (obsolete GO:1903149)","synonyms":[{"name":"adenine transmembrane transporter activity involved in adenine import into cell","type":"exact"}],"termid":"GO:1903149"}


id: GO:0075189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hyphopodium formation","termid":"GO:0075188"},{"relation_name":"positively_regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hyphopodium formation","synonyms":[{"name":"positive regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075189"}


id: GO:0050657
data:
  {"annotated_genes":["SJAG_04721","SJAG_00471","SJAG_04083","SJAG_01534","SJAG_03156","SJAG_05328","SJAG_01449","SJAG_01467","SJAG_04480","SJAG_04379","SJAG_01374","SJAG_02520","SJAG_04645","SJAG_04017","SJAG_01529","SJAG_00641","SJAG_01083","SJAG_03299","SJAG_04347","SJAG_00298","SJAG_03729","SJAG_03002","SJAG_04622","SJAG_00375","SJAG_00178","SJAG_02274","SJAG_03470","SJAG_03283","SJAG_02534","SJAG_04472","SJAG_01013","SJAG_03300","SJAG_00093","SJAG_01065","SJAG_04589","SJAG_04115","SJAG_03593","SJAG_03847","SJAG_04656","SJAG_02757","SJAG_04148","SJAG_02209","SJAG_03986","SJAG_01715","SJAG_04202","SJAG_04310","SJAG_02661","SJAG_02425","SJAG_00992","SJAG_03358","SJAG_01185","SJAG_04536","SJAG_02704","SJAG_01652","SJAG_03693","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113362,113488,93244,111012,111625,99125,85183,100070,85657,86776,97275,101491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[59091,58004,63800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[109371,103756,110578,98774,97989,112435,98091,101855,102275,87111,106550,115006,107872,68864,111626,112177,112688,111110,88335,104816,111919,107239,100071,92678,93092,112541,97516,114107,98873,105983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[85193,96544,101167,92650,91124,92272,90137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[98682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[109655,101383,85526,108118,101857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[95669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[109656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of nucleic acids, single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nucleic acid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0050657","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: GO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"activation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"positive regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"positive regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"stimulation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"up regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"up-regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"upregulation of mitotic cell cycle, embryonic","type":"exact"}],"termid":"GO:0045977"}


id: PBO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12 (predicted)","termid":"PBO:0001661"}


id: PBO:0056425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis regulator and mRNA stability factor 1","termid":"PBO:0056425"}


id: GO:0019901
data:
  {"annotated_genes":["SJAG_06592","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[70067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase binding","termid":"GO:0019900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein kinase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019901","terms_by_termid":{"GO:0034236":null,"GO:0043424":null}}


id: FYPO:0004818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of transfer RNA genes measured in a cell is lower than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased antisense RNA level","termid":"FYPO:0004816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased tDNA antisense small RNA level","synonyms":[{"name":"decreased accumulation of tDNA antisense small RNAs","type":"related"},{"name":"decreased antisense small RNA at tDNA","type":"exact"},{"name":"decreased antisense transcription-derived small RNA level at tDNA","type":"exact"},{"name":"decreased tDNA antisense small RNA accumulation","type":"related"},{"name":"decreased tDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased tDNA antisense small RNA level during vegetative growth","type":"exact"},{"name":"reduced tDNA antisense small RNA level","type":"exact"}],"termid":"FYPO:0004818"}


id: GO:1905789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8692859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:1905787"},{"relation_name":"positively_regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"activation of detection of mechanical stimulus involved in sensory perception of touch","type":"narrow"},{"name":"activation of perception of touch, detection of mechanical stimulus","type":"narrow"},{"name":"activation of perception of touch, sensory detection of mechanical stimulus","type":"narrow"},{"name":"activation of perception of touch, sensory transduction of mechanical stimulus","type":"narrow"},{"name":"activation of sensory detection of mechanical stimulus during perception of touch","type":"narrow"},{"name":"activation of sensory transduction of mechanical stimulus during perception of touch","type":"narrow"},{"name":"activation of tactition, sensory detection of mechanical stimulus","type":"narrow"},{"name":"positive regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"positive regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"positive regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"positive regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"positive regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"positive regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"up regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"up regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"up regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"up regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"up regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"up regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"up regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"up-regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"up-regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"up-regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"up-regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"upregulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"upregulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"upregulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"upregulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"upregulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"upregulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"upregulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905789"}


id: PBO:0048106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far upstream element binding protein 1","termid":"PBO:0048106"}


id: PBO:0038280
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first_approved_timestamp","termid":"PBO:0038280"}


id: GO:0014821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within phasic smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the phasic smooth muscle, the muscle contraction occurs without an ordered sarcomeric structure. Phasic smooth muscle contraction occurs in a series of discrete contractions and relaxations.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phasic smooth muscle contraction","termid":"GO:0014821"}


id: GO:0035184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a threonine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone threonine kinase activity (obsolete GO:0035184)","synonyms":[{"name":"histone-threonine kinase activity","type":"exact"}],"termid":"GO:0035184"}


id: GO:1901818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-zeacarotene.","definition_xrefs":["GOC:TermGenie","PMID:3710717","UniPathway:UPA00805","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene biosynthetic process","synonyms":[{"name":"beta-zeacarotene anabolism","type":"exact"},{"name":"beta-zeacarotene biosynthesis","type":"exact"},{"name":"beta-zeacarotene formation","type":"exact"},{"name":"beta-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901818"}


id: PBO:0054730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2139","termid":"PBO:0054730"}


id: FYPO:0005070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abolished mitotic sister chromatid separation, producing inviable daughter cells, and in which the septum forms in a position that partitions the nucleus into one compartment. Cell separation may or may not be completed.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abolished mitotic sister chromatid separation, with mononucleate and anucleate compartment formation (obsolete FYPO:0005070)","synonyms":[{"name":"cut with abolished mitotic sister chromatid separation and anucleate cell formation","type":"exact"},{"name":"cut with abolished mitotic sister chromatid separation, with mononucleate and anucleate compartment formation during mitotic cell cycle","type":"related"},{"name":"cut with abolished mitotic sister chromatid separation, with mononucleate and anucleate compartment formation during vegetative growth","type":"exact"},{"name":"monoseptate vegetative cell with mononucleate and anucleate compartments following abolished mitotic sister chromatid separation","type":"exact"},{"name":"septation following abolished mitotic sister chromatid separation, with mononucleate and anucleate compartment formation","type":"exact"}],"termid":"FYPO:0005070"}


id: PBO:0087653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; prefoldin binds specifically to cytosolic chaperonin and transfers target proteins to it; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation","termid":"PBO:0087653"}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: PBO:0083661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0083661"}


id: PBO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin","termid":"PBO:0044214"}


id: FYPO:0004449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during mitosis","termid":"FYPO:0004357"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation during meiotic cell cycle","termid":"FYPO:0005577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic metaphase","synonyms":[{"name":"decreased protein phosphorylation during metaphase of mitosis","type":"exact"},{"name":"decreased protein phosphorylation during mitotic metaphase during vegetative growth","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitotic metaphase","type":"exact"},{"name":"reduced protein phosphorylation during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004449"}


id: GO:0009728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a gibberellic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to gibberellin","termid":"GO:0009739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of gibberellic acid stimulus","synonyms":[{"name":"perception of gibberellic acid stimulus","type":"related"}],"termid":"GO:0009728"}


id: GO:0047924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geraniol + NADP+ = geranial + NADPH.","definition_xrefs":["MetaCyc:GERANIOL-DEHYDROGENASE-RXN","EC:1.1.1.183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"geraniol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1163","RHEA:14521"],"synonyms":[{"name":"geraniol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047924"}


id: GO:1901417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"negatively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to ethanol","synonyms":[{"name":"down regulation of response to ethanol","type":"exact"},{"name":"down-regulation of response to ethanol","type":"exact"},{"name":"downregulation of response to ethanol","type":"exact"},{"name":"inhibition of response to ethanol","type":"narrow"}],"termid":"GO:1901417"}


id: GO:0048067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle pigmentation","termid":"GO:0048067"}


id: PBO:0089464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor protein","termid":"PBO:0089464"}


id: PBO:0054659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2065","termid":"PBO:0054659"}


id: PBO:0074955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-6","termid":"PBO:0074955"}


id: PBO:0028308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_cellular_response_to_methylglyoxal","termid":"PBO:0028308"}


id: GO:1902011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(ribitol phosphate) teichoic acid.","definition_xrefs":["GOC:TermGenie","PMID:11882717","UniPathway:UPA00790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(ribitol phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(ribitol phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902011"}


id: PBO:0086948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Recognition component (N-recognin) of the Pro/N-degron pathway; recognizes and targets for degradation proteins with N-terminal degradation signals; expressed only under starvation or osmotic stress","termid":"PBO:0086948"}


id: GO:0098713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of leucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine import across plasma membrane (obsolete GO:0098713)","synonyms":[{"name":"L-leucine import into cell","type":"narrow"},{"name":"leucine import into cell","type":"exact"}],"termid":"GO:0098713"}


id: GO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits via an internal ribosome entry segment (IRES) before an AUG codon is encountered in an appropriate sequence context to initiate linear mRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation of linear mRNA","termid":"GO:0110017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"IRES-dependent translational initiation of linear mRNA","termid":"GO:0002192"}


id: GO:0160022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue by discharging a portion of the secreting cell when intracellular components are freed into a lumen through the shedding of whole pieces of the cytoplasm.","definition_xrefs":["PMID:25960390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"apocrine secretion","synonyms":[{"name":"secretion by cell decapitation","type":"related"},{"name":"secretion by membrane budding","type":"related"}],"termid":"GO:0160022"}


id: FYPO:0003913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a lower frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased minichromosome loss during vegetative growth","synonyms":[{"name":"decreased minichromosome loss during mitotic cell cycle","type":"related"},{"name":"reduced minichromosome loss during vegetative growth","type":"exact"}],"termid":"FYPO:0003913"}


id: GO:0043697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specialized cell loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["GOC:dph","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dedifferentiation","termid":"GO:0043696"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell dedifferentiation","termid":"GO:0043697"}


id: PBO:0068311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF13 pseudogene 1","termid":"PBO:0068311"}


id: _global:integral_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X integral_part_of Y if and only if: X part_of Y and Y has_part X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral_part_of","termid":"_global:integral_part_of"}


id: PBO:0056307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 3","termid":"PBO:0056307"}


id: GO:0047865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + electron-transfer flavoprotein + H2O = sarcosine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["RHEA:52856","EC:1.5.8.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase activity","secondary_identifiers":["MetaCyc:DIMETHYLGLYCINE-DEHYDROGENASE-RXN","Reactome:R-HSA-6797653","KEGG_REACTION:R01565"],"synonyms":[{"name":"N,N-dimethylglycine oxidase activity","type":"related"},{"name":"N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N,N-dimethylglycine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047865"}


id: GO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the epistomal sclerite are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"epistomal sclerite development","termid":"GO:0048724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epistomal sclerite morphogenesis","termid":"GO:0048719"}


id: GO:0050110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions : D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-serine and D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-threonyl + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-threonyl.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-alpha-N-acetylgalactosaminidase activity (obsolete GO:0050110)","termid":"GO:0050110"}


id: PBO:0051317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-1 (pseudogene)","termid":"PBO:0051317"}


id: GO:0032737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of interleukin-14 production (obsolete GO:0032737)","synonyms":[{"name":"activation of interleukin-14 production","type":"narrow"},{"name":"positive regulation of IL-14 production","type":"exact"},{"name":"positive regulation of interleukin-14 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-14 production","type":"narrow"},{"name":"up regulation of interleukin-14 production","type":"exact"},{"name":"up-regulation of interleukin-14 production","type":"exact"},{"name":"upregulation of interleukin-14 production","type":"exact"}],"termid":"GO:0032737"}


id: PBO:0049719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4 pseudogene 1","termid":"PBO:0049719"}


id: GO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly specialized structure unique to microsporidia that is required for host cell invasion. In the spore, the polar tube is connected at the anterior end, and then coils around the sporoplasm. Upon appropriate environmental stimulation, the polar tube rapidly discharges out of the spore, pierces a cell membrane and serves as a conduit for sporoplasm passage into the new host cell.","definition_xrefs":["GOC:mf","PMID:12076771","PMID:9723921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar tube","termid":"GO:0044099"}


id: PBO:0005365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0005365"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: PBO:0066790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 89","termid":"PBO:0066790"}


id: GO:0008888
data:
  {"annotated_genes":["SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84802],"is_not":false,"summary":null,"term":"GO:0008888"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + NAD+ = glycerone + H+ + NADH.","definition_xrefs":["RHEA:13769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol dehydrogenase [NAD(P)+] activity","termid":"GO:1990042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.6","MetaCyc:GLYCDEH-RXN","KEGG_REACTION:R01034"],"synonyms":[{"name":"NAD-linked glycerol dehydrogenase activity","type":"related"},{"name":"glycerol dehydrogenase activity","type":"broad"}],"termid":"GO:0008888","terms_by_termid":{"GO:0008888":null}}


id: GO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"positively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation","synonyms":[{"name":"activation of mast cell degranulation","type":"narrow"},{"name":"positive regulation of mast cell granule exocytosis","type":"exact"},{"name":"stimulation of mast cell degranulation","type":"narrow"},{"name":"up regulation of mast cell degranulation","type":"exact"},{"name":"up-regulation of mast cell degranulation","type":"exact"},{"name":"upregulation of mast cell degranulation","type":"exact"}],"termid":"GO:0043306"}


id: GO:0086027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an AV node cardiac muscle cell to a bundle of His cardiomyocyte.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell signaling","synonyms":[{"name":"AV node cell to bundle of His cell signalling","type":"exact"},{"name":"atrioventricular node to bundle of His cell signaling","type":"exact"}],"termid":"GO:0086027"}


id: _global:existence_overlaps
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_overlaps","secondary_identifiers":["RO:0002490"],"termid":"_global:existence_overlaps"}


id: PBO:0089949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1","termid":"PBO:0089949"}


id: PBO:0090299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mdm12","termid":"PBO:0090299"}


id: GO:0042794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"},{"relation_name":"is_a","term_name":"plastid transcription","termid":"GO:0042793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"plastid rRNA transcription","synonyms":[{"name":"rRNA transcription from plastid promoter","type":"exact"}],"termid":"GO:0042794"}


id: PBO:0057662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1255a","termid":"PBO:0057662"}


id: PBO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt1","termid":"PBO:0005745"}


id: PBO:0076323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synergin gamma","termid":"PBO:0076323"}


id: GO:1990473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ciliary targeting sequence, a specific peptide sequence that acts as a signal to localize a membrane protein to the ciliary membrane.","definition_xrefs":["PMID:18256283","GOC:krc","PMID:19575670","PMID:20697559","PMID:20603001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"ciliary targeting signal binding","synonyms":[{"name":"CTS binding","type":"exact"}],"termid":"GO:1990473"}


id: PBO:0084089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF); involved in vesicle-mediated vacuolar transport, including Golgi-endosome trafficking and sorting through the multivesicular body (MVB); specifically stimulates the intrinsic guanine nucleotide exchange activity of Rab family members (Vps21p/Ypt52p/Ypt53p); partially redundant with GEF VPS9; required for localization of the CORVET complex to endosomes; contains a VPS9 domain","termid":"PBO:0084089"}


id: PBO:0043771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX20","termid":"PBO:0043771"}


id: PBO:0077446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 179","termid":"PBO:0077446"}


id: GO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-lysine = L-glutamate + allysine.","definition_xrefs":["RHEA:21200","EC:2.6.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"L-lysine 6-transaminase activity","secondary_identifiers":["KEGG_REACTION:R00457","MetaCyc:L-LYSINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-lysine aminotransferase activity","type":"related"},{"name":"L-lysine transaminase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate 6-aminotransferase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"L-lysine:2-oxoglutarate 6-aminotransferase activity","type":"related"},{"name":"lysine 6-aminotransferase activity","type":"exact"},{"name":"lysine epsilon-aminotransferase activity","type":"related"},{"name":"lysine epsilon-transaminase activity","type":"related"},{"name":"lysine:2-ketoglutarate 6-aminotransferase activity","type":"related"}],"termid":"GO:0045484"}


id: GO:0016128
data:
  {"annotated_genes":["SJAG_02982","SJAG_03509","SJAG_03929","SJAG_03349","SJAG_01474","SJAG_02044","SJAG_04865","SJAG_03235","SJAG_00717","SJAG_00580","SJAG_04217","SJAG_00624","SJAG_03531","SJAG_04499","SJAG_03352","SJAG_00413","SJAG_03715","SJAG_00158","SJAG_03598","SJAG_04790","SJAG_00453","SJAG_02068","SJAG_04018","SJAG_03024","SJAG_00770","SJAG_04049","SJAG_04810","SJAG_03018","SJAG_04270","SJAG_02104","SJAG_01307","SJAG_00370","SJAG_04059","SJAG_03750","SJAG_02719","SJAG_00235","SJAG_02855","SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105605,85832,112664,88682,94185,106207,84921,95722,111021,88735,107930,105364,103832,102641,90780,111351,103965,90588,100394,100809,100578,84889,84668,107425,103651,87637,114858,92732,94983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[114957,84954,111193,100122,99487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[90026],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105975],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[84758,84757,101948],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytosteroids, steroids of higher plants that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00235":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytosteroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phytosteroid metabolism","type":"exact"}],"termid":"GO:0016128","terms_by_termid":{"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: SO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array_member","synonyms":[{"name":"gene array member","type":"exact"}],"termid":"SO:0000081"}


id: PR:Q6LA55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.09c gene.","definition_xrefs":["UniProtKB:Q6LA55","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0648 protein C3H5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.09c","synonyms":[{"name":"Spom972h-SPAC3H5.09c","type":"exact"}],"termid":"PR:Q6LA55"}


id: GO:0070777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-aspartate, the D-enantiomer of the anion of (2R)-2-aminobutanedioic acid  is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"D-aspartate transmembrane transport","termid":"GO:0070777"}


id: PBO:0072771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A1","termid":"PBO:0072771"}


id: PBO:0080268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 31 pseudogene","termid":"PBO:0080268"}


id: CHEBI:17568
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil","termid":"CHEBI:17568"}


id: SO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombinationally rearranged gene by inversion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"recombinationally_rearranged_gene","termid":"SO:0000456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_inverted_gene","synonyms":[{"name":"recombinationally inverted gene","type":"exact"}],"termid":"SO:0000373"}


id: GO:0170005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of cyclic nucleotide phosphodiesterase.","definition_xrefs":["PMID:6667031","PMID:6259174","PMID:6087882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"cyclic nucleotide phosphodiesterase activator activity","termid":"GO:0170005"}


id: MOD:01712
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01712"}


id: PBO:0059274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 3","termid":"PBO:0059274"}


id: PBO:0045976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 2","termid":"PBO:0045976"}


id: PBO:0029945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_vegetative_cell_population_(obsolete_FYPO:0002292)","termid":"PBO:0029945"}


id: PBO:0112000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0112000"}


id: PBO:0071468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 9","termid":"PBO:0071468"}


id: PBO:0110050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide PI4,5P(2) binding protein Slm1","termid":"PBO:0110050"}


id: PBO:0027249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity","termid":"PBO:0027249"}


id: PBO:0055128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2547","termid":"PBO:0055128"}


id: GO:0060943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation from a neural crest cell to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell development","termid":"GO:0060936"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell development","termid":"GO:0060943"}


id: PBO:0044418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP2U1 and SGMS2 antisense RNA 1","termid":"PBO:0044418"}


id: PBO:0079632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 2","termid":"PBO:0079632"}


id: PBO:0069842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1128, pseudogene","termid":"PBO:0069842"}


id: PBO:0074288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 3","termid":"PBO:0074288"}


id: PBO:0056402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPT intronic transcript 1","termid":"PBO:0056402"}


id: FYPO:0002315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular FPP level","synonyms":[{"name":"normal cellular FPP level during vegetative growth","type":"exact"},{"name":"normal cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"normal cellular FPP accumulation","type":"related"},{"name":"normal cellular FPP level during mitotic cell cycle","type":"related"},{"name":"normal cellular farnesyl diphosphate level","type":"broad"},{"name":"normal cellular farnesyl pyrophosphate level","type":"broad"}],"termid":"FYPO:0002315"}


id: PBO:0016553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85b (predicted)","termid":"PBO:0016553"}


id: GO:0045132
data:
  {"annotated_genes":["SJAG_03540","SJAG_01601","SJAG_05196","SJAG_03989","SJAG_03073","SJAG_01775","SJAG_01837","SJAG_03926","SJAG_02286","SJAG_00678","SJAG_02814","SJAG_02542","SJAG_00727","SJAG_04076","SJAG_02624","SJAG_05295","SJAG_05319","SJAG_02731","SJAG_01224","SJAG_03327","SJAG_04623","SJAG_05260","SJAG_00646","SJAG_00229","SJAG_02346","SJAG_00418","SJAG_01777","SJAG_03092","SJAG_04259","SJAG_04126","SJAG_01263","SJAG_04457","SJAG_01082","SJAG_02761","SJAG_03048","SJAG_00918","SJAG_01211","SJAG_01278","SJAG_04745","SJAG_03698","SJAG_07002","SJAG_04143","SJAG_04508","SJAG_01613","SJAG_01805","SJAG_00207","SJAG_01873","SJAG_05226","SJAG_03220","SJAG_03681","SJAG_05019","SJAG_03437","SJAG_03217","SJAG_00600","SJAG_02606","SJAG_01546","SJAG_02104","SJAG_03685","SJAG_03680","SJAG_03683","SJAG_05220","SJAG_03287","SJAG_03942","SJAG_05266","SJAG_00794","SJAG_01538","SJAG_00756","SJAG_01371","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112062],"is_not":false,"summary":null,"term":"GO:0045132"},{"annotations":[112788],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[84062,89975],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[97455,94759,111649,89939,109909,84008,103942,86456,113169],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[83952,106676,89013,107343,103943],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[89940,110615,90024,106307,85537,87933,109352,113801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045143"},{"annotations":[85766,113170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[102060,85937],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[83594,98947,101210,96042,85938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[89942,105266,91455,114230,95352,114749,96511,112043,98566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990571"},{"annotations":[109353,103944,100616,109910,95258,112020,97921,110617,97398,89943],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[113669],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051307"},{"annotations":[90025,106308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[107804,109354,84197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045144"},{"annotations":[95353,92911,90914],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090306"},{"annotations":[97555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051232"},{"annotations":[97556,95354],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140642"},{"annotations":[92860,102061,113652,83595,113789,112063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[110112,102062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[106310,90029],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090006"},{"annotations":[98521],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"},{"annotations":[112803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[87142,85322,91456,106439,89956,98568,106480,105269,94050,109356,112045,106018,103946,97459,113032,103625,105008,85922,101588,94767,110220,91710,96646],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear chromosome segregation","termid":"GO:0098813"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic nuclear 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id: GO:0140359
data:
  {"annotated_genes":["SJAG_03785","SJAG_04277","SJAG_01344","SJAG_02602","SJAG_03497","SJAG_03850","SJAG_03363","SJAG_05213","SJAG_04167","SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97005,97714],"is_not":false,"summary":null,"term":"GO:0140359"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[104789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[103305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[114289,93200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[108470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[92219,114042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Primary active transporter characterized by two nucleotide-binding domains and two transmembrane domains. Uses the energy generated from ATP hydrolysis to drive the transport of a substance across a membrane.","definition_xrefs":["PMID:26517899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_02457":null,"SJAG_02602":null,"SJAG_03363":null,"SJAG_03497":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_04167":null,"SJAG_04277":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5362459","Reactome:R-HSA-5387389","Reactome:R-HSA-429157","Wikipedia:ATP-binding_cassette_transporter","Reactome:R-HSA-9661405","Reactome:R-HSA-266070","Reactome:R-HSA-9750656","TC:3.A.1"],"synonyms":[{"name":"ABC transporter","type":"exact"},{"name":"ABC-type efflux permease activity","type":"exact"},{"name":"ABC-type efflux porter activity","type":"exact"},{"name":"ABC-type transmembrane transporter activity","type":"exact"},{"name":"ABC-type uptake permease activity","type":"exact"},{"name":"ATP binding cassette transporter","type":"exact"},{"name":"ATP-binding cassette (ABC) transporter activity","type":"exact"},{"name":"ATP-binding cassette transporter","type":"exact"}],"termid":"GO:0140359","terms_by_termid":{"GO:0008559":null,"GO:0015410":null,"GO:0015421":null,"GO:0044604":null,"GO:0140359":null,"GO:0140481":null,"GO:0140679":null}}


id: PBO:0086107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of the cytochrome bc(1) complex; acts as a chaperone for Rip1p and facilitates its insertion into the complex at a late stage of assembly; localized to the mitochondrial matrix; null mutant exhibits a respiratory growth defect and reduced mitochondrial zinc levels, which is characteristic of mutations affecting bc(1) complex assembly; member of the LYR protein family; human LYRM7 is a functional ortholog","termid":"PBO:0086107"}


id: GO:0048492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"exact"}],"termid":"GO:0048492"}


id: PBO:0057665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1256","termid":"PBO:0057665"}


id: SO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon that is the only exon in a gene.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_of_single_exon_gene","synonyms":[{"name":"exon of single exon gene","type":"exact"},{"name":"single_exon","type":"related"},{"name":"singleton exon","type":"exact"}],"termid":"SO:0005845"}


id: PBO:0014600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triman, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014600"}


id: GO:0003759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct, non-covalent assembly of glycoproteins in vivo, but is not a component of the assembled structures when performing its normal biological function. Utilizes a lectin site as a means to associate with the unfolded glycoproteins.","definition_xrefs":["PMID:11337494","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein-specific chaperone activity (obsolete GO:0003759)","synonyms":[{"name":"glycoprotein-specific chaperone activity","type":"exact"}],"termid":"GO:0003759"}


id: PBO:0079180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 9","termid":"PBO:0079180"}


id: GO:0070773
data:
  {"annotated_genes":["SJAG_00476","SJAG_00450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77423,103078],"is_not":false,"summary":null,"term":"GO:0070773"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-terminal L-glutaminyl-[protein] + H2O = N-terminal L-glutamyl-[protein] + NH3. This reaction is the deamidation of an N-terminal glutamine residue of a protein.","definition_xrefs":["PMID:19560421","RHEA:50680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"protein-N-terminal glutamine amidohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.122"],"synonyms":[{"name":"NtQ-amidase activity","type":"exact"}],"termid":"GO:0070773","terms_by_termid":{"GO:0070773":null}}


id: PBO:0038358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-over-expressed_in","termid":"PBO:0038358"}


id: PBO:0079390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III pseudogene 2","termid":"PBO:0079390"}


id: PR:O42940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transport protein pho88 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.04","synonyms":[{"name":"Spom972h-SPBC16H5.04","type":"exact"},{"name":"phosphate metabolism protein pho88 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42940"}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: PATO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality that exists through a liquid cover on the surface of the bearer.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coating","termid":"PATO:0002012"}


id: GO:0160140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(1911/1915/1917) in 23S rRNA = pseudouridine(1911/1915/1917) in 23S rRNA.","definition_xrefs":["RHEA:42524","EC:5.4.99.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016853","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"23S rRNA pseudouridine(1911/1915/1917) synthase activity","termid":"GO:0160140"}


id: PBO:0069769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1052, pseudogene","termid":"PBO:0069769"}


id: PBO:0041177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A2","termid":"PBO:0041177"}


id: PBO:0078515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 1","termid":"PBO:0078515"}


id: GO:0102425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin + UDP-alpha-D-glucose = myricetin 3-O-beta-D-glucopyranoside + UDP.","definition_xrefs":["EC:2.4.1.91","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"myricetin 3-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13822"],"termid":"GO:0102425"}


id: PBO:0067890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 192","termid":"PBO:0067890"}


id: PBO:0090759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, NASP family, Sim3","termid":"PBO:0090759"}


id: GO:0035819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of sodium excreted in urine over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of renal sodium excretion","termid":"GO:0035815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion by pressure natriuresis","synonyms":[{"name":"natriuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035819"}


id: GO:1905785
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98491],"is_not":false,"summary":null,"term":"GO:1905785"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anaphase-promoting complex-dependent catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:10921876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032435"},{"relation_name":"is_a","term_name":"regulation of anaphase-promoting complex-dependent catabolic process","termid":"GO:1905784"},{"relation_name":"negatively_regulates","term_name":"anaphase-promoting complex-dependent catabolic process","termid":"GO:0031145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anaphase-promoting complex-dependent catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905785","terms_by_termid":{"GO:1905785":null}}


id: GO:0098914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the atrial cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"}],"termid":"GO:0098914"}


id: FYPO:0003585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is decreased.","definition_xrefs":["GO:0031145","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"decreased anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"decreased anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"decreased anaphase-promoting complex-dependent protein degradation","type":"exact"},{"name":"reduced anaphase-promoting complex-dependent protein catabolic process","type":"exact"}],"termid":"FYPO:0003585"}


id: PBO:0040541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 9","termid":"PBO:0040541"}


id: GO:1902913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation.","definition_xrefs":["GOC:mr","PMID:16916506","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"positively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroepithelial cell differentiation","synonyms":[{"name":"activation of neuroepithelial cell differentiation","type":"narrow"},{"name":"up regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"up-regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"upregulation of neuroepithelial cell differentiation","type":"exact"}],"termid":"GO:1902913"}


id: PR:Q9Y801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug57 gene.","definition_xrefs":["UniProtKB:Q9Y801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein mug57 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.10","synonyms":[{"name":"Spom972h-mug57","type":"exact"},{"name":"meiotically up-regulated gene 57 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y801"}


id: GO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural plate development","termid":"GO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate morphogenesis","termid":"GO:0001839"}


id: GO:0015934
data:
  {"annotated_genes":["SJAG_03919","SJAG_01580","SJAG_02510","SJAG_00726","SJAG_02071","SJAG_00315","SJAG_01608","SJAG_01721","SJAG_01194","SJAG_01591","SJAG_00166","SJAG_02312","SJAG_06612","SJAG_04847","SJAG_04493","SJAG_00384","SJAG_00086","SJAG_02890","SJAG_02836","SJAG_01322","SJAG_01364","SJAG_03159","SJAG_02755","SJAG_00921","SJAG_01829","SJAG_02207","SJAG_00748","SJAG_06253","SJAG_07009","SJAG_01045","SJAG_03459","SJAG_02546","SJAG_05573","SJAG_04020","SJAG_05218","SJAG_03284","SJAG_02243","SJAG_03425","SJAG_02283","SJAG_00497","SJAG_02840","SJAG_04066","SJAG_01303","SJAG_04160","SJAG_00465","SJAG_04414","SJAG_03176","SJAG_03364","SJAG_03197","SJAG_01588","SJAG_04176","SJAG_01565","SJAG_03666","SJAG_00799","SJAG_01478","SJAG_02891","SJAG_00749","SJAG_02121","SJAG_04019","SJAG_03402","SJAG_02535","SJAG_03043","SJAG_04244","SJAG_03423","SJAG_02280","SJAG_05248","SJAG_02081","SJAG_00034","SJAG_03122","SJAG_01551","SJAG_03192","SJAG_03383","SJAG_03636","SJAG_02611","SJAG_03335","SJAG_01676","SJAG_01853","SJAG_03649","SJAG_01473","SJAG_00844","SJAG_04478","SJAG_02762","SJAG_04893","SJAG_03971","SJAG_01630","SJAG_05221","SJAG_03326","SJAG_03127","SJAG_00537","SJAG_04534","SJAG_00940","SJAG_02802","SJAG_03922","SJAG_05216","SJAG_00765","SJAG_01463","SJAG_01719","SJAG_05244","SJAG_06110","SJAG_01568","SJAG_01413","SJAG_01365","SJAG_04897","SJAG_02531","SJAG_04490","SJAG_05270","SJAG_01411","SJAG_07013","SJAG_00629","SJAG_01128","SJAG_02597","SJAG_04626","SJAG_04889","SJAG_03297","SJAG_04207","SJAG_03040","SJAG_01202","SJAG_00155","SJAG_01087","SJAG_01727","SJAG_02871","SJAG_00220","SJAG_04689","SJAG_04304","SJAG_04216","SJAG_07014","SJAG_03133"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108062,87202,107224,104741,92337,86405,108320,98608,98592,105659,95299,97442,114045,89754,97441,110596,110597,93619,113526,108319,101831,104311,104332,113525,112997,111464,93584,92969,108508,109634,84289,105660,110141,93320,103204,106858,104740,113689,91023,83867,87178,86271,85775,107745,103992,111292,113747,96555,96912,93603,108239,114352,112887,110038,98023,92336,94347,91050,98591,110642,111291,97330,89755,108240,95298,97487,100228,104299,84272,92970,96554,101832,109633,110039,114874,113690,98024,113748,104443,87176,93311,95996,107223,111829,109618,105955,97796,104442,114351,112888,101533,93604,84373,106408,100229,108446,89716,108138,101532,86270,113738,97486,112691,104310,84291,93620,95214,103205,104331,88617,91049,114984,107746,86406,85547,97797,108445,110641,112998,107158,115040,95215,97032,93585,104108,87177,107157,87203,96911,83868,100908,91024,106407,114875,95997,88616,106857,114983,115041,84290,94348,108139,110142,89717,93222,93319,113862,112692,111463,101662,98607,105956,108507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022625"},{"annotations":[94126,99568,85206,87611,92402,105964,106899,111481,111528,112277,108584,108841,101960,113219,95230,109570,110432,110710,98739,94786,104201,101813,100971,98058,99818,109014,112385,92737,104347,85648,93040,94105,107218,113110,111354,110829,92363,97220,108346,84546,100486,104300,99461,102867,114008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005762"}]},"cv_name":"cellular_component","definition":"The larger of the two subunits of a ribosome. 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id: GO:1901153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving paromomycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"paromomycin metabolic process","synonyms":[{"name":"paromomycin metabolism","type":"exact"}],"termid":"GO:1901153"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: GO:1990404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: amino acyl-[protein] + NAD+ = H+ + (ADP-D-ribosyl)-amino acyl-[protein] + nicotinamide.","definition_xrefs":["PMID:1899243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD+-protein ADP-ribosyltransferase activity","secondary_identifiers":["Wikipedia:ADP-ribosylation"],"synonyms":[{"name":"protein ADP-ribosylase activity","type":"exact"},{"name":"protein ADP-ribosyltransferase activity","type":"broad"},{"name":"ribosylase activity","type":"broad"}],"termid":"GO:1990404"}


id: PBO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 20","termid":"PBO:0071943"}


id: PATO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000446 absolute percentage value (obsolete PATO:0000446)","termid":"PATO:0000446"}


id: FYPO:0001590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during vegetative growth","termid":"FYPO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased lysine import during vegetative growth","synonyms":[{"name":"decreased L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-lysine import during vegetative growth","type":"exact"},{"name":"decreased lysine import during mitotic cell cycle","type":"related"},{"name":"decreased lysine import into cell during vegetative growth","type":"exact"},{"name":"decreased lysine uptake during vegetative growth","type":"exact"},{"name":"reduced lysine import during vegetative growth","type":"exact"}],"termid":"FYPO:0001590"}


id: PBO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1 homeobox B","termid":"PBO:0050289"}


id: GO:0110044
data:
  {"annotated_genes":["SJAG_04332","SJAG_01311","SJAG_03371","SJAG_03486","SJAG_04682","SJAG_02404","SJAG_00457","SJAG_03501","SJAG_05288","SJAG_01401","SJAG_03048","SJAG_04813","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90688,97749,98516,101022,105171],"is_not":false,"summary":null,"term":"GO:0110044"},{"annotations":[102764,98493,101918,100562,102077,105386,114450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[112606,114312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:al","PMID:17674143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sexual differentiation","type":"related"}],"termid":"GO:0110044","terms_by_termid":{"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: GO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"cytosol pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045249"}


id: GO:0160185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme phospholipase C.","definition_xrefs":["PMID:28130414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"phospholipase C activator activity","termid":"GO:0160185"}


id: GO:0090190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.","definition_xrefs":["GOC:tb","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090189"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090190"}


id: GO:0010464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"}


id: GO:1904708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["PMID:19208546","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulosa cell apoptotic process","synonyms":[{"name":"regulation of granulosa cell apoptosis","type":"narrow"},{"name":"regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"regulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904708"}


id: PBO:0049571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 8","termid":"PBO:0049571"}


id: PBO:0084095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Rho1p; mutations are synthetically lethal with mutations in rom2, which also encodes a GEP; ROM1 has a paralog, ROM2, that arose from the whole genome duplication","termid":"PBO:0084095"}


id: PBO:0029175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029175"}


id: FYPO:0005596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle is increased during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:26696398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to spindle during meiosis I","synonyms":[{"name":"increased protein localisation to spindle during meiosis I","type":"exact"},{"name":"increased protein localization to meiosis I spindle","type":"exact"},{"name":"increased protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"increased protein localization to spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005596"}


id: PBO:0063174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ binding kinase","termid":"PBO:0063174"}


id: PBO:0065511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-serine-threonine phosphatase interacting protein 1","termid":"PBO:0065511"}


id: PBO:0083780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein required for pre-18S rRNA processing; interacts with Dim1p, an 18S rRNA dimethyltransferase, and also with Nob1p, which is involved in proteasome biogenesis; contains a KH domain","termid":"PBO:0083780"}


id: FYPO:0000586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall assembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall assembly","termid":"FYPO:0000175"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004805","FYPO:0005447","FYPO:0000631","FYPO:0000121","FYPO:0001985"],"is_obsolete":false,"name":"abolished ascospore wall assembly","synonyms":[{"name":"absent spore wall formation","type":"related"},{"name":"ascospore wall assembly abolished","type":"exact"},{"name":"spore wall formation abolished","type":"related"},{"name":"spore wall formation: absent","type":"related"}],"termid":"FYPO:0000586"}


id: PBO:0087896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; component of the heteromeric Ino2p/Ino4p basic helix-loop-helix transcription activator that binds inositol/choline-responsive elements (ICREs), required for derepression of phospholipid biosynthetic genes in response to inositol depletion; involved in diauxic shift","termid":"PBO:0087896"}


id: PBO:0108589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13B","termid":"PBO:0108589"}


id: GO:0141176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which Piwi-associated RNAs (piRNAs) guide de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32674113","PMID:38359823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"piRNA-mediated heterochromatin formation","termid":"GO:0140966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"gene silencing by piRNA-directed DNA methylation","termid":"GO:0141176"}


id: PBO:0059834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission process 1","termid":"PBO:0059834"}


id: GO:0086044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an atrial cardiomyocyte and an AV node cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell communication by electrical coupling","synonyms":[{"name":"atrial cardiomyocyte to AV node cell communication by electrical coupling","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086044"}


id: PBO:0049066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 83","termid":"PBO:0049066"}


id: GO:0035334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavages to the Notch protein that occur prior to ligand binding. A primary cleavage event within the extracellular domain whilst the Notch protein in still in the secretory pathway, leads to the transportation of a processed heterodimer to the cell surface.","definition_xrefs":["PMID:12651094","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"Notch receptor processing","termid":"GO:0007220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"Notch receptor processing, ligand-independent","synonyms":[{"name":"Notch S1 cleavage","type":"narrow"}],"termid":"GO:0035334"}


id: GO:0055101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a glycerophospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid.","definition_xrefs":["GOC:ai","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete glycerophospholipase inhibitor activity (obsolete GO:0055101)","synonyms":[{"name":"glycerophospholipase inhibitor activity","type":"exact"}],"termid":"GO:0055101"}


id: PBO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 55","termid":"PBO:0044365"}


id: PBO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXM1-regulated, gastric cancer associated","termid":"PBO:0047997"}


id: PBO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member B","termid":"PBO:0047194"}


id: PR:Q10178-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-2.","definition_xrefs":["PRO:DNx","UniProtKB:Q10178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q10178-2"],"synonyms":[{"name":"Spom972h-SF3B1/iso:B","type":"exact"}],"termid":"PR:Q10178-2"}


id: PATO:0002280
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's possessing a broad surface in articulation with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articulated with","termid":"PATO:0002278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broadly articulated with","termid":"PATO:0002280"}


id: GO:0047234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = sucrose + 1F-alpha-D-galactosylraffinose.","definition_xrefs":["MetaCyc:2.4.1.166-RXN","EC:2.4.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"raffinose-raffinose alpha-galactotransferase activity","secondary_identifiers":["MetaCyc:RXN-11490","RHEA:14125"],"synonyms":[{"name":"raffinose (raffinose donor) galactosyltransferase activity","type":"related"},{"name":"raffinose-raffinose a-galactosyltransferase activity","type":"exact"},{"name":"raffinose-raffinose alpha-galactosyltransferase activity","type":"exact"},{"name":"raffinose:raffinose alpha-D-galactosyltransferase activity","type":"related"},{"name":"raffinose:raffinose alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047234"}


id: GO:0019468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"nopaline metabolic process","termid":"GO:0046418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"nopaline catabolic process","secondary_identifiers":["MetaCyc:NOPALINEDEG-PWY"],"synonyms":[{"name":"nopaline breakdown","type":"exact"},{"name":"nopaline catabolism","type":"exact"},{"name":"nopaline degradation","type":"exact"}],"termid":"GO:0019468"}


id: PBO:0070406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2","termid":"PBO:0070406"}


id: GO:0031628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an opioid receptor.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"opioid receptor binding","termid":"GO:0031628"}


id: GO:0030296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"protein tyrosine kinase activator activity","termid":"GO:0030296"}


id: PBO:0030028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_adenylyl_cyclase_activity","termid":"PBO:0030028"}


id: PBO:0065558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3","termid":"PBO:0065558"}


id: GO:0043231
data:
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id: PBO:0072614
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id: PBO:0086670
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id: FYPO:0004133
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id: PBO:0062522
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id: GO:0002334
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id: GO:0038096
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id: GO:0021886
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id: GO:1902283
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id: PBO:0070364
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id: PBO:0053661
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id: PBO:0091314
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id: GO:0097187
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id: PBO:0054635
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id: PBO:0075385
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id: PBO:0109830
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id: PBO:0067363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 462, pseudogene","termid":"PBO:0067363"}


id: GO:1990174
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87843],"is_not":false,"summary":null,"term":"GO:1990174"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the cap from an unmethylated 5'-end capped RNA resulting in the release of the entire cap structure (GpppN) and a 5' monophosphorylated RNA.","definition_xrefs":["GOC:dgf","PMID:20802481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140098","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphodiesterase decapping endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G(5')pppN pyrophosphatase activity","type":"related"}],"termid":"GO:1990174","terms_by_termid":{"GO:1990174":null}}


id: PR:000050532
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PMID:22150589","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me1:(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed monomethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf2/Me1:(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050532"}


