# terms

id: GO:1903606
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90583,103596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytochrome c.","definition_xrefs":["GOC:dph","GO_REF:0000068","PMID:19721088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome c metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c metabolism","type":"exact"}],"termid":"GO:1903606","terms_by_termid":{"GO:1903607":null}}


id: PR:O94389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 124 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain-containing protein 124 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.12","secondary_identifiers":["UniProtKB:O94389"],"synonyms":[{"name":"Spom972h-CCDC124","type":"exact"}],"termid":"PR:O94389"}


id: PBO:0047641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 4","termid":"PBO:0047641"}


id: GO:0072120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the pronephros to attain its fully functional state. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros maturation","synonyms":[{"name":"pronephric kidney maturation","type":"exact"}],"termid":"GO:0072120"}


id: FYPO:0001599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which asparagine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal asparagine import","synonyms":[{"name":"normal L-asparagine import","type":"exact"},{"name":"normal L-asparagine import across plasma membrane","type":"exact"},{"name":"normal asparagine import during mitotic cell cycle","type":"related"},{"name":"normal asparagine import during vegetative growth","type":"exact"},{"name":"normal asparagine import into cell","type":"exact"},{"name":"normal asparagine uptake","type":"exact"}],"termid":"FYPO:0001599"}


id: GO:0003856
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87257],"is_not":false,"summary":null,"term":"GO:0003856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-dehydroquinate + phosphate.","definition_xrefs":["EC:4.2.3.4","RHEA:21968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3-dehydroquinate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3-DEHYDROQUINATE-SYNTHASE-RXN","KEGG_REACTION:R03083"],"termid":"GO:0003856","terms_by_termid":{"GO:0003856":null}}


id: PBO:0076816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 3","termid":"PBO:0076816"}


id: PBO:0082013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger containing ubiquitin peptidase 1","termid":"PBO:0082013"}


id: PBO:0078062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 52","termid":"PBO:0078062"}


id: PBO:0049309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase pi 1","termid":"PBO:0049309"}


id: PBO:0083357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUP159/YIL115C","termid":"PBO:0083357"}


id: FYPO:0000336
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115469],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115553,115401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115322],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115290,115264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115470],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_04522","SJAG_02392","SJAG_01143"],"name":"abnormal cellular component assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522","SJAG_01143","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","mid1delta","rga4delta","pom1delta"],"synonyms":[{"name":"abnormal cellular component assembly at cellular level","type":"exact"}],"termid":"FYPO:0000336","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA.","definition_xrefs":["MetaCyc:1.1.1.178-RXN","EC:1.1.1.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:13281"],"synonyms":[{"name":"(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase activity","type":"related"},{"name":"2-methyl-3-hydroxy-butyryl CoA dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"}],"termid":"GO:0047015"}


id: GO:0006787
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"porphyrin-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin breakdown","type":"related"},{"name":"porphyrin catabolic process","type":"related"},{"name":"porphyrin catabolism","type":"related"},{"name":"porphyrin degradation","type":"related"}],"termid":"GO:0006787","terms_by_termid":{"GO:0042167":null}}


id: GO:0042305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the mandibular segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"posterior head segmentation","termid":"GO:0035289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, mandibular segment","termid":"GO:0042305"}


id: PBO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S14 (predicted)","termid":"PBO:0001580"}


id: GO:0010466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidase activity","termid":"GO:0010466"}


id: _global:has_output
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","secondary_identifiers":["RO:0002234"],"termid":"_global:has_output"}


id: PBO:0065819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5A, member RAS oncogene family","termid":"PBO:0065819"}


id: PBO:0083186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene CTS2/YDR371W; identified by expression profiling and mass spectrometry","termid":"PBO:0083186"}


id: GO:0052647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentitol phosphates, any phosphorylated alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentitol phosphate metabolic process","synonyms":[{"name":"pentitol phosphate metabolism","type":"exact"}],"termid":"GO:0052647"}


id: GO:2000973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pro-B cell differentiation","synonyms":[{"name":"regulation of pro-B cell development","type":"related"},{"name":"regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000973"}


id: PBO:0028070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_aseptate_mononucleate_cell","termid":"PBO:0028070"}


id: PBO:0069887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1176, pseudogene","termid":"PBO:0069887"}


id: PR:O74859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hnt3 gene.","definition_xrefs":["UniProtKB:O74859","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.09c","synonyms":[{"name":"Hit family protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hnt3","type":"exact"}],"termid":"PR:O74859"}


id: GO:0061089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sequestering of zinc ion (obsolete GO:0061089)","termid":"GO:0061089"}


id: GO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (2R,6R)-lanthionine, sn-(2S,6R)-lanthionine or (2S,3S,6R)-3-methyl-lanthionine, forming an intra-polypeptide cross-link between peptidyl-cysteine, and peptidyl-serine or peptidyl-threonine; dehydration of the serine or threonine residue to the alpha,beta-unsaturated amino acid is the first step; a bond then forms between the ethylene (ethene) group thus formed and the sulfur atom of a cysteine, with the inversion of the configuration of the alpha carbon of the serine or threonine occurring during the process.","definition_xrefs":["RESID:AA0111","ISBN:0198547684","RESID:AA0112","RESID:AA0110"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via lanthionine or 3-methyl-lanthionine (obsolete GO:0018081)","synonyms":[{"name":"peptide cross-linking via the thioethers lanthionine or 3-methyl-lanthionine","type":"exact"},{"name":"peptide cross-linking via the thiolethers lanthionine or 3-methyl-lanthionine","type":"exact"}],"termid":"GO:0018081"}


id: GO:0033522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of one or more ubiquitin groups.","definition_xrefs":["PMID:18430235","GOC:bf","GOC:mah","PMID:15509584","PMID:16473935"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A ubiquitination (obsolete GO:0033522)","termid":"GO:0033522"}


id: PBO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030981"}


id: MOD:02048
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-histidine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-histidine residue","synonyms":[{"name":"XlnkHis","type":"exact"}],"termid":"MOD:02048"}


id: PBO:0067350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 447, pseudogene","termid":"PBO:0067350"}


id: PATO:0000883
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000883 female fertility value (obsolete PATO:0000883)","termid":"PATO:0000883"}


id: GO:0035464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway that is involved in the determination of organismal asymmetry with regard to its left and right halves.","definition_xrefs":["GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor receptor beta signaling pathway involved in determination of left/right asymmetry (obsolete GO:0035464)","synonyms":[{"name":"regulation of TGF-beta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGF-beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:0035464"}


id: PBO:0043261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 19","termid":"PBO:0043261"}


id: PBO:0046277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EQTN MOB3B IFNK C9orf72 enhancer RNA I","termid":"PBO:0046277"}


id: GO:0030104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of water within an organism or cell.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete water homeostasis (obsolete GO:0030104)","secondary_identifiers":["Wikipedia:Osmoregulation"],"synonyms":[{"name":"osmoregulation","type":"related"},{"name":"regulation of osmotic pressure","type":"exact"}],"termid":"GO:0030104"}


id: PBO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 188","termid":"PBO:0061689"}


id: GO:0098505
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91237],"is_not":false,"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:11349150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"G-rich strand telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098505","terms_by_termid":{"GO:0098505":null}}


id: FYPO:0006881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phytoceramide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phytoceramide level","synonyms":[{"name":"decreased cellular phytoceramide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phytoceramide level during vegetative growth","type":"exact"},{"name":"decreased phytoceramide accumulation","type":"related"},{"name":"reduced cellular phytoceramide level","type":"exact"}],"termid":"FYPO:0006881"}


id: GO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl glycine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0241"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine thiazolecarboxylic acid (obsolete GO:0018137)","termid":"GO:0018137"}


id: MOD:00054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-acetyl-L-glutamine.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-glutamine","synonyms":[{"name":"(2S)-2-acetamido-5-pentanediamic acid","type":"exact"},{"name":"2-acetylamino-5-amino-5-oxopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-pentanediamic acid","type":"exact"},{"name":"2-acetylazanyl-5-azanyl-5-oxopentanoic acid","type":"exact"},{"name":"AcGln","type":"exact"},{"name":"N-acetyl-L-glutamine","type":"exact"},{"name":"N-acetylated L-glutamine","type":"exact"},{"name":"acetylglutamine","type":"exact"}],"termid":"MOD:00054"}


id: FYPO:0001639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular methionine level","synonyms":[{"name":"normal cellular L-methionine level","type":"exact"},{"name":"normal cellular methionine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methionine level during vegetative growth","type":"exact"},{"name":"normal level of methionine in cell","type":"exact"}],"termid":"FYPO:0001639"}


id: PBO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related to S. pombe SPAC521.02 and S. cerevisiae YHR134W, but has an additional N-terminal ubiquitin family domain","termid":"PBO:0010216"}


id: PBO:0056410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 7","termid":"PBO:0056410"}


id: PBO:0034479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034479"}


id: CHEBI:17015
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin","termid":"CHEBI:17015"}


id: PBO:0039670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit beta 1","termid":"PBO:0039670"}


id: FYPO:0007370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased cell population growth on fructose carbon source","termid":"FYPO:0009095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth rate on fructose carbon source","synonyms":[{"name":"enhanced growth on fructose","type":"related"},{"name":"fast cell population growth on fructose carbon source","type":"exact"},{"name":"increased cell population proliferation on fructose carbon source","type":"related"},{"name":"increased cell proliferation on fructose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on fructose carbon source","type":"exact"}],"termid":"FYPO:0007370"}


id: PBO:0004975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 10","termid":"PBO:0004975"}


id: SO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An experimental feature with high sequence identity to another sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high_identity_region","synonyms":[{"name":"high identity region","type":"exact"}],"termid":"SO:0001502"}


id: FYPO:0006560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic G1 phase","synonyms":[{"name":"reduced protein kinase activity during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006560"}


id: PR:Q10443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nod1 gene.","definition_xrefs":["UniProtKB:Q10443","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.10","synonyms":[{"name":"Spom972h-nod1","type":"exact"}],"termid":"PR:Q10443"}


id: PBO:0064454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with KRAB domain","termid":"PBO:0064454"}


id: GO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of a cell in the epidermis resulting in the formation of the mammary line. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["PMID:16168142","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in mammary gland specification (obsolete GO:0060593)","synonyms":[{"name":"Wnt receptor signaling pathway involved in mammary gland specification","type":"exact"},{"name":"Wnt receptor signalling pathway involved in mammary gland specification","type":"exact"},{"name":"Wnt-activated signaling pathway involved in mammary gland specification","type":"exact"}],"termid":"GO:0060593"}


id: GO:1900984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of vindoline.","definition_xrefs":["GOC:yaf","GOC:TermGenie","MetaCyc:PWY-5292"],"gene_count":0,"genotype_count":0,"name":"obsolete vindoline catabolic process (obsolete GO:1900984)","synonyms":[{"name":"vindoline breakdown","type":"exact"},{"name":"vindoline catabolism","type":"exact"},{"name":"vindoline degradation","type":"exact"}],"termid":"GO:1900984"}


id: GO:0010380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.","definition_xrefs":["PMID:17291312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"}


id: PR:C6Y4D2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp49 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4D2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein MRP49, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.19","synonyms":[{"name":"Spom972h-mrp49","type":"exact"}],"termid":"PR:C6Y4D2"}


id: PBO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Spm1 MAP kinase","termid":"PBO:0000252"}


id: PR:O94707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.07","synonyms":[{"name":"Spom972h-rxt3","type":"exact"}],"termid":"PR:O94707"}


id: PBO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 57","termid":"PBO:0050985"}


id: PR:O42842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenine phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11776:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.03","secondary_identifiers":["UniProtKB:O42842"],"synonyms":[{"name":"APRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23A1.03","type":"related"},{"name":"Spom972h-APRT","type":"exact"}],"termid":"PR:O42842"}


id: PBO:0071619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 37","termid":"PBO:0071619"}


id: GO:0010759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage chemotaxis. Macrophage chemotaxis is the movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of macrophage chemotaxis","termid":"GO:0010758"},{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"positive regulation of macrophage migration","termid":"GO:1905523"},{"relation_name":"positively_regulates","term_name":"macrophage chemotaxis","termid":"GO:0048246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage chemotaxis","termid":"GO:0010759"}


id: GO:0015835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycans, a class of glycoconjugates found in bacterial cell walls, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"peptidoglycan transport","synonyms":[{"name":"murein transport","type":"exact"}],"termid":"GO:0015835"}


id: PBO:0055170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2594","termid":"PBO:0055170"}


id: PBO:0074766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 2","termid":"PBO:0074766"}


id: PR:O60164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pescadillo that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12221:SF6","OMA:SCHPO03820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.05c","secondary_identifiers":["UniProtKB:O60164"],"synonyms":[{"name":"Spom972h-PES1","type":"exact"},{"name":"nucleolar protein 7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60164"}


id: PBO:0063715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGM5P3 antisense RNA 1","termid":"PBO:0063715"}


id: GO:0097234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an epidermal lamellar body, a specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body membrane","termid":"GO:0097232"},{"relation_name":"part_of","term_name":"epidermal lamellar body","termid":"GO:0097209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"epidermal lamellar body membrane","termid":"GO:0097234"}


id: PBO:0066738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 35","termid":"PBO:0066738"}


id: FYPO:0000541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein transport during vegetative growth","synonyms":[{"name":"decreased protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: decreased","type":"related"},{"name":"reduced protein transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000541"}


id: PBO:0055274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2701","termid":"PBO:0055274"}


id: PBO:0084417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major cell wall mannoprotein with possible lipase activity; transcription is induced by heat- and cold-shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0084417"}


id: FYPO:0003234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at HOOD during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003234"}


id: GO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont reactive oxygen species production (obsolete GO:0052570)","synonyms":[{"name":"response to defense-related symbiont reactive oxygen species production","type":"exact"}],"termid":"GO:0052570"}


id: PBO:0056723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit beta","termid":"PBO:0056723"}


id: PBO:0048968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPALPP motifs containing 1","termid":"PBO:0048968"}


id: PBO:0027541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning_at_stress_response_genes","termid":"PBO:0027541"}


id: PBO:0073231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SENP3-EIF4A1 readthrough (NMD candidate)","termid":"PBO:0073231"}


id: PBO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BB member 1 pseudogene","termid":"PBO:0062238"}


id: SO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant whereby a region of a chromosome has been transferred to another position. Among interchromosomal rearrangements, the term transposition is reserved for that class in which the telomeres of the chromosomes involved are coupled (that is to say, form the two ends of a single DNA molecule) as in wild-type.","definition_xrefs":["SO:ke","FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_transposition","synonyms":[{"name":"chromosomal transposition","type":"exact"},{"name":"transposition","type":"narrow"}],"termid":"SO:0000453"}


id: PBO:0063411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 7","termid":"PBO:0063411"}


id: PBO:0031047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_acetylation","termid":"PBO:0031047"}


id: GO:0003141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands that contributes to lateral mesoderm left/right asymmetry determination.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0003141)","synonyms":[{"name":"TGF-beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"TGF-beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0003141"}


id: PBO:0078982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 2-1","termid":"PBO:0078982"}


id: PBO:0044145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 11","termid":"PBO:0044145"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: PBO:0004863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin (predicted)","termid":"PBO:0004863"}


id: GO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion.","definition_xrefs":["GOC:dgh","GOC:cjm","GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}


id: GO:0016915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A nonsteroidal regulator, composed of two covalently linked beta subunits, that is synthesized in the pituitary gland and gonads and stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["ISBN:0198506732","ISBN:0721662544"],"gene_count":0,"genotype_count":0,"name":"obsolete activin (obsolete GO:0016915)","synonyms":[{"name":"activin","type":"exact"}],"termid":"GO:0016915"}


id: GO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.","definition_xrefs":["GOC:jsg","RHEA:40459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pristanoyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-389889","Reactome:R-HSA-389891"],"termid":"GO:0016402"}


id: PBO:0076144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 3","termid":"PBO:0076144"}


id: SO:1000117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000117 sequence_variant_affecting_polypeptide_function (obsolete SO:1000117)","synonyms":[{"name":"mutation affecting polypeptide function","type":"related"},{"name":"sequence variant affecting polypeptide function","type":"exact"}],"termid":"SO:1000117"}


id: GO:0032839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a dendrite, excluding the surrounding plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"dendrite cytoplasm","synonyms":[{"name":"dendritic cytoplasm","type":"exact"}],"termid":"GO:0032839"}


id: GO:0035138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin morphogenesis","termid":"GO:0033334"},{"relation_name":"part_of","term_name":"pectoral fin development","termid":"GO:0033339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pectoral fin morphogenesis","termid":"GO:0035138"}


id: PATO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplitude","termid":"PATO:0000080"}


id: GO:0042990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription factor import into nucleus (obsolete GO:0042990)","synonyms":[{"name":"regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of transcription factor-nucleus import","type":"exact"}],"termid":"GO:0042990"}


id: PBO:0050764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 26","termid":"PBO:0050764"}


id: PBO:0063457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide deformylase, mitochondrial","termid":"PBO:0063457"}


id: GO:1900188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"down regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"down-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"downregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"downregulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"inhibition of cell adhesion during single-species biofilm formation","type":"related"},{"name":"inhibition of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"negative regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900188"}


id: GO:0043619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0043619)","termid":"GO:0043619"}


id: FYPO:0000854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of euchromatin is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome positioning in euchromatin","synonyms":[{"name":"abnormal nucleosome occupancy in euchromatin","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing in euchromatin","type":"exact"}],"termid":"FYPO:0000854"}


id: PBO:0055795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 4","termid":"PBO:0055795"}


id: GO:0003859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-hydroxybutanoyl-CoA = (2E)-butenoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.55","RHEA:17849"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxybutyryl-CoA dehydratase activity (obsolete GO:0003859)","synonyms":[{"name":"(3R)-3-hydroxybutanoyl-CoA hydro-lyase (crotonoyl-CoA-forming)","type":"related"},{"name":"(3R)-3-hydroxybutanoyl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxybutyryl-CoA dehydratase activity","type":"broad"},{"name":"D-3-hydroxybutyryl coenzyme A dehydratase activity","type":"related"},{"name":"D-3-hydroxybutyryl-CoA dehydratase activity","type":"related"},{"name":"crotonase activity","type":"related"},{"name":"enoyl coenzyme A hydrase (D)","type":"broad"}],"termid":"GO:0003859"}


id: PBO:0089818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MBF transcription factor complex subunit Cdc10","termid":"PBO:0089818"}


id: PBO:0088570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Uba2","termid":"PBO:0088570"}


id: PBO:0082585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-binding ATPase that regulates histone gene expression; only bromodomain-containing AAA-ATPase in yeast; bromodomain interacts with N-terminal tail of histone H3; relocalizes to cytosol in response to hypoxia; human ortholog ANCCA is coactivator of both estrogen and androgen receptors, and increased expression of ANCCA is associated with breast and prostate cancers with poor prognoses","termid":"PBO:0082585"}


id: GO:0044387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stopping, prevention, or reduction in frequency, rate or extent of protein kinase activity as a result of regulating the phosphorylation status of that protein kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein kinase activity by regulation of protein phosphorylation","termid":"GO:0044387"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: PR:Q9UTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YbaZ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02119","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkyltransferase-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.04c","secondary_identifiers":["UniProtKB:Q9UTN9"],"synonyms":[{"name":"Spom972h-ybaZ","type":"exact"}],"termid":"PR:Q9UTN9"}


id: PBO:0011129
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase Like Fidgetin","termid":"PBO:0011129"}


id: PBO:0029215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_wall","termid":"PBO:0029215"}


id: MOD:01610
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to L-threonine methyl ester.","definition_xrefs":["PubMed:19745839","RESID:AA0507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"},{"relation_name":"is_a","term_name":"O-methylated threonine","termid":"MOD:01803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-threonine methyl ester","synonyms":[{"name":"L-threonine methyl ester","type":"exact"},{"name":"MOD_RES Threonine methyl ester","type":"exact"},{"name":"methyl (2S,3R)-2-amino-3-hydroxybutanoate","type":"exact"},{"name":"methyl L-threoninate","type":"exact"}],"termid":"MOD:01610"}


id: PBO:0083920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1; major enzyme of polyprenol synthesis in both the endoplasmic reticulum (ER) and in lipid droplets; participates in ER protein sorting; human ortholog DHDDS functionally complements the heat sensitive growth defect of a ts allele, and is associated with retinitis pigmentosa","termid":"PBO:0083920"}


id: PBO:0061255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase trafficking","termid":"PBO:0061255"}


id: GO:0003045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of forces within the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by physical factors","synonyms":[{"name":"blood pressure regulation by physical factors","type":"exact"}],"termid":"GO:0003045"}


id: GO:1905403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"negatively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905403"}


id: PBO:0003994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdm1","termid":"PBO:0003994"}


id: GO:0031700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adrenomedullin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"adrenomedullin receptor binding","synonyms":[{"name":"adrenomedullin receptor ligand","type":"narrow"}],"termid":"GO:0031700"}


id: GO:0061723
data:
  {"annotated_genes":["SJAG_01561","SJAG_00115","SJAG_01783","SJAG_04963","SJAG_03851","SJAG_06309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86255,93749,94744,96412,104771,105895],"is_not":false,"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The selective degradation of glycogen by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:21893048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006091","GO:0006914","GO:0005975"],"is_obsolete":false,"name":"glycophagy","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061723","terms_by_termid":{"GO:0061723":null}}


id: GO:0002893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of type II hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"negatively_regulates","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type II hypersensitivity","synonyms":[{"name":"down regulation of type II hypersensitivity","type":"exact"},{"name":"down-regulation of type II hypersensitivity","type":"exact"},{"name":"downregulation of type II hypersensitivity","type":"exact"},{"name":"inhibition of type II hypersensitivity","type":"narrow"}],"termid":"GO:0002893"}


id: GO:0070984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SET domain of a protein. SET domains are named after three Drosophila proteins that contain this domain: Su(var), E(z) and trithorax. SET domains are associated with histone lysine methylation.","definition_xrefs":["Pfam:PF00856","PMID:12575990","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SET domain binding","synonyms":[{"name":"SET binding","type":"exact"}],"termid":"GO:0070984"}


id: PBO:0051670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 1","termid":"PBO:0051670"}


id: GO:0019398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, where the first step is the conversion of gallate to (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate catalyzed by gallate dioxygenase.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic gallate catabolic process","termid":"GO:0042195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"gallate catabolic process via gallate dioxygenase activity","secondary_identifiers":["MetaCyc:GALLATE-DEGRADATION-II-PWY"],"synonyms":[{"name":"gallate breakdown via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallate catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"broad"},{"name":"gallate degradation via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolism via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"}],"termid":"GO:0019398"}


id: PBO:0074355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 3","termid":"PBO:0074355"}


id: PBO:0061778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occludin/ELL domain containing 1","termid":"PBO:0061778"}


id: GO:0102184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloartenol + NADH + O2 + H+ = 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloartenol 4alpha-methyl oxidase activity (obsolete GO:0102184)","termid":"GO:0102184"}


id: SO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["SO:ke","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_DNA_contact","synonyms":[{"name":"DNA_bind","type":"exact"},{"name":"polypeptide DNA contact","type":"exact"}],"termid":"SO:0100020"}


id: PBO:0054288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1679","termid":"PBO:0054288"}


id: GO:0000109
data:
  {"annotated_genes":["SJAG_04540","SJAG_02556","SJAG_00512","SJAG_03206","SJAG_00901","SJAG_03454","SJAG_00995","SJAG_02334","SJAG_01049","SJAG_04147","SJAG_00500","SJAG_03618","SJAG_01480","SJAG_03612","SJAG_01887","SJAG_02828","SJAG_03613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112808,112809,112830],"is_not":false,"summary":null,"term":"GO:0000109"},{"annotations":[87024,107267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070912"},{"annotations":[84555,87025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070913"},{"annotations":[106939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070522"},{"annotations":[107537,106940,114839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000110"},{"annotations":[84482,113242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000111"},{"annotations":[86424,99277,108202,88310,86059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000112"},{"annotations":[107361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000113"},{"annotations":[84484,113243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"Any complex formed of proteins that act in nucleotide-excision repair.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01480":null,"SJAG_01887":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_03612":null,"SJAG_03613":null,"SJAG_03618":null,"SJAG_04147":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleotide-excision repair complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UvrB-UvrC complex","type":"narrow"},{"name":"UvrBC complex","type":"narrow"}],"termid":"GO:0000109","terms_by_termid":{"GO:0000109":null,"GO:0000110":null,"GO:0000111":null,"GO:0000112":null,"GO:0000113":null,"GO:0070522":null,"GO:0070912":null,"GO:0070913":null,"GO:0071942":null}}


id: GO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the front of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in forward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in forward cell locomotion","type":"related"}],"termid":"GO:0060328"}


id: PBO:0002620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase Spe1 (predicted)","termid":"PBO:0002620"}


id: FYPO:0005853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which filamentous actin (F-actin) is present in the cytoplasm in the form of dense, irregularly shaped aggregates.","definition_xrefs":["PomBase:mah","PMID:12764130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"aggregated filamentous actin in cytoplasm","synonyms":[{"name":"F-actin accumulation in cytoplasm","type":"related"},{"name":"aggregated F- actin in cytoplasm","type":"exact"},{"name":"aggregated cytoplasmic F-actin","type":"exact"},{"name":"aggregated cytoplasmic filamentous actin","type":"exact"},{"name":"aggregated filamentous actin in cytoplasm during mitotic cell cycle","type":"related"},{"name":"aggregated filamentous actin in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0005853"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: PBO:0054215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1595","termid":"PBO:0054215"}


id: PBO:0044156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase 1","termid":"PBO:0044156"}


id: PBO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0005555"}


id: GO:0141068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of epigenetic modifications (imprints) in autosomal (non-sexual) chromosomes during gametogenesis, and propagation of these imprints during the organism's life. Genomic imprinting leads to an asymmetry between the maternal and paternal alleles and differential expression of the corresponding alleles. This can happen through heterochromatin formation or differential chromatin loop formation.","definition_xrefs":["PMID:31782494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"autosome genomic imprinting","synonyms":[{"name":"autosomal genomic imprinting","type":"exact"},{"name":"genomic imprinting of autosomal genes","type":"exact"}],"termid":"GO:0141068"}


id: PBO:0067639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 812, pseudogene","termid":"PBO:0067639"}


id: PBO:0082873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to the plasma membrane (PM) and regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1p phosphatase to its substrate PI4P in the PM; localized to the bud via specific mRNA transport; non-tagged protein detected in a phosphorylated state in mitochondria; C-termini of Tcb1p, Tcb2p and Tcb3p interact","termid":"PBO:0082873"}


id: GO:0035489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/G mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanine/guanine mispair binding","synonyms":[{"name":"G/G mispair binding","type":"exact"}],"termid":"GO:0035489"}


id: PBO:0060055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 2","termid":"PBO:0060055"}


id: PBO:0055996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long stress-induced non-coding transcript 5","termid":"PBO:0055996"}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + H+ + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["RHEA:13729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0009975","GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["EC:4.6.1.15"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: PBO:0063039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 6","termid":"PBO:0063039"}


id: PBO:0059509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block II","termid":"PBO:0059509"}


id: PBO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm12","termid":"PBO:0003694"}


id: PR:Q9P3T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3T6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.10c","synonyms":[{"name":"Spom972h-rps502","type":"exact"}],"termid":"PR:Q9P3T6"}


id: FYPO:0000472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mating type switching is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mating type switching","synonyms":[{"name":"mating type switching: normal","type":"related"},{"name":"normal mating type switching during mitotic cell cycle","type":"related"},{"name":"normal mating type switching during vegetative growth","type":"exact"}],"termid":"FYPO:0000472"}


id: PBO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction mediating and regulatory protein, p53 cofactor","termid":"PBO:0052020"}


id: FYPO:0005641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochores become separated during the first meiotic nuclear division, and in which homologous chromosomes do not move towards the spindle poles at the same time during anaphase, but are eventually separated normally.","definition_xrefs":["PomBase:mah","PMID:21920317","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging chromosomes during meiosis I","termid":"FYPO:0004393"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","termid":"FYPO:0005633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with precocious centromeric dissociation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome segregation","type":"related"},{"name":"abnormal chromosome segregation during meiosis I with split kinetochores, lagging chromosomes, and normal chromosome separation","type":"related"}],"termid":"FYPO:0005641"}


id: PBO:0060140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanistic target of rapamycin kinase","termid":"PBO:0060140"}


id: FYPO:0001406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased septum thickness","synonyms":[{"name":"increased septal material","type":"related"},{"name":"increased septum thickness during mitotic cell cycle","type":"related"},{"name":"increased septum thickness during vegetative growth","type":"exact"},{"name":"thick septum","type":"exact"}],"termid":"FYPO:0001406"}


id: GO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase III transcription factor binding (obsolete GO:0001007)","synonyms":[{"name":"RNA polymerase III transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001007"}


id: PR:P40976
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.04c","synonyms":[{"name":"L-aminoadipate-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys1","type":"exact"},{"name":"alpha-AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40976"}


id: PBO:0027071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_telomeres","termid":"PBO:0027071"}


id: SO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non coding RNA transcript, complementary to subtelomeric tract of TERRA transcript but devoid of the repeats.","definition_xrefs":["PMID:2139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRET","termid":"SO:0001924"}


id: GO:0160177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate which autophagosomes fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects).","definition_xrefs":["PMID:38360932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"positively_regulates","term_name":"autophagosome-lysosome fusion","termid":"GO:0061909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of autophagosome-lysosome fusion","termid":"GO:0160177"}


id: GO:1904898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15358192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast proliferation","termid":"GO:0048147"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell proliferation","termid":"GO:1904897"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell proliferation","synonyms":[{"name":"down regulation of Ito cell proliferation","type":"exact"},{"name":"down regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of Ito cell proliferation","type":"exact"},{"name":"down-regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down-regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of Ito cell proliferation","type":"exact"},{"name":"downregulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of hepatic stellate cell proliferation","type":"exact"},{"name":"downregulation of perisinusoidal cell proliferation","type":"exact"},{"name":"inhibition of Ito cell proliferation","type":"narrow"},{"name":"inhibition of hepatic perisinusoidal cell proliferation","type":"narrow"},{"name":"inhibition of hepatic stellate cell proliferation","type":"narrow"},{"name":"inhibition of perisinusoidal cell proliferation","type":"narrow"},{"name":"negative regulation of Ito cell proliferation","type":"exact"},{"name":"negative regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"negative regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904898"}


id: PBO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase pseudogene 1","termid":"PBO:0045088"}


id: PBO:0055204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2629","termid":"PBO:0055204"}


id: PBO:0089941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S15","termid":"PBO:0089941"}


id: PBO:0028631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U6_2'-O-snRNA_methylation","termid":"PBO:0028631"}


id: GO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + cation(out) = sialate(in) + cation(in).","definition_xrefs":["TC:2.A.1.14.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sialate:monoatomic cation symporter activity","synonyms":[{"name":"cation/sialate symporter activity","type":"exact"},{"name":"cation:sialate symporter activity","type":"exact"},{"name":"sialate transporter activity","type":"broad"},{"name":"sialate/cation symporter activity","type":"exact"},{"name":"sialate:cation symporter activity","type":"broad"}],"termid":"GO:0015306"}


id: PBO:0058090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4307","termid":"PBO:0058090"}


id: PR:Q9Y7T3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA(His) guanylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(His) guanylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.07","secondary_identifiers":["UniProtKB:Q9Y7T3"],"synonyms":[{"name":"Spom972h-THG1L","type":"exact"},{"name":"tRNA-histidine guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T3"}


id: PBO:0027022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_punctate_nuclear_protein_localization","termid":"PBO:0027022"}


id: PBO:0047547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 6","termid":"PBO:0047547"}


id: FYPO:0006706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: GO:1901105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetracenomycin C.","definition_xrefs":["UniPathway:UPA00174","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"tetracenomycin C metabolic process","termid":"GO:1901104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"tetracenomycin C catabolic process","synonyms":[{"name":"tetracenomycin C breakdown","type":"exact"},{"name":"tetracenomycin C catabolism","type":"exact"},{"name":"tetracenomycin C degradation","type":"exact"}],"termid":"GO:1901105"}


id: PBO:0050278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor HB-1","termid":"PBO:0050278"}


id: GO:0009455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to redox potential.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"},{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"redox taxis","synonyms":[{"name":"redoxtaxis","type":"exact"},{"name":"taxis in response to redox potential","type":"exact"},{"name":"taxis in response to redox stimulus","type":"exact"}],"termid":"GO:0009455"}


id: PBO:0070654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 25","termid":"PBO:0070654"}


id: GO:0034983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine deacetylation","synonyms":[{"name":"protein lysine acetylation","type":"related"}],"termid":"GO:0034983"}


id: PBO:0072143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 20","termid":"PBO:0072143"}


id: PBO:0017649
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorders of glygosylation","termid":"PBO:0017649"}


id: PBO:0057974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689f","termid":"PBO:0057974"}


id: PR:P36613
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin mcs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.02","secondary_identifiers":["UniProtKB:P36613"],"synonyms":[{"name":"Spom972h-CCNH","type":"exact"},{"name":"mitotic catastrophe suppressor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36613"}


id: PR:Q09741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spermidine synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03285","PANTHER:PTHR11558:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.07c","secondary_identifiers":["UniProtKB:Q09741"],"synonyms":[{"name":"SPDSY (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRM","type":"exact"},{"name":"putrescine aminopropyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09741"}


id: PBO:0047151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 182 member B","termid":"PBO:0047151"}


id: MOD:02025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts the alpha amino group of a glutamine residue to glutaminyl glutamic acid by forming an isopeptide bond with the side chain carboxyl group of a free glutamic acid.","definition_xrefs":["PubMed:28801462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutaminyl glutamic acid","termid":"MOD:02025"}


id: PBO:0056370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 7","termid":"PBO:0056370"}


id: PBO:0044643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DC-STAMP domain containing 1","termid":"PBO:0044643"}


id: GO:0031165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the contractile vacuolar membrane consisting of gene products that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:dos","GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of contractile vacuolar membrane (obsolete GO:0031165)","synonyms":[{"name":"integral to contractile vacuolar membrane","type":"exact"}],"termid":"GO:0031165"}


id: GO:0004999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with vasoactive intestinal polypeptide to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor activity","termid":"GO:0004999"}


id: GO:0035211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a spermathecum, a sperm storage organ, are generated and organized. Paired spermathecae lie at the anterior end of the insect uterus on the dorsal side. Each spermatheca consists of an oval shaped capsule, connected to the uterus by a spermathecal stalk.","definition_xrefs":["PMID:12679097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermathecum morphogenesis","termid":"GO:0035211"}


id: SOFP:na_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A nucleic acid modification in some variant feature relative to the reference sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"na_change","termid":"SOFP:na_change"}


id: PBO:0059181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRE11 homolog, double strand break repair nuclease pseudogene 1","termid":"PBO:0059181"}


id: PBO:0042517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDIP transferase opposite strand, pseudogene","termid":"PBO:0042517"}


id: FYPO:0005144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of proteasome regulatory particle binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased proteasome regulatory particle binding","synonyms":[{"name":"reduced proteasome regulatory particle binding","type":"exact"}],"termid":"FYPO:0005144"}


id: GO:0160059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes and occurring as a result of a retinoic acid.","definition_xrefs":["PMID:9187263","PMID:17869331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"cellular response to retinoic acid","termid":"GO:0071300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death in response to retinoic acid","synonyms":[{"name":"retinoic acid-induced apoptosis","type":"exact"}],"termid":"GO:0160059"}


id: GO:0010009
data:
  {"annotated_genes":["SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86740],"is_not":false,"summary":null,"term":"GO:0010009"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"cytoplasmic side of endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"external leaflet of endosome membrane","type":"exact"},{"name":"external side of endosome membrane","type":"exact"}],"termid":"GO:0010009","terms_by_termid":{"GO:0010009":null}}


id: GO:0097027
data:
  {"annotated_genes":["SJAG_01051","SJAG_03858","SJAG_00666","SJAG_03809","SJAG_04853","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113256],"is_not":false,"summary":null,"term":"GO:0097027"},{"annotations":[84879,96267,98420,111066,85133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990757"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ubiquitin-protein transferase.","definition_xrefs":["GOC:rb","PMID:18321851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ubiquitin-protein transferase regulator activity","termid":"GO:0055106"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01051":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"ubiquitin-protein transferase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097027","terms_by_termid":{"GO:0097027":null,"GO:1990757":null}}


id: PBO:0086985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Replication fork associated factor; required for stable replication fork pausing; component of the DNA replication checkpoint pathway; required for accurate chromosome segregation during meiosis; forms nuclear foci upon DNA replication stress","termid":"PBO:0086985"}


id: PBO:0072184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17","termid":"PBO:0072184"}


id: PBO:0060867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 10","termid":"PBO:0060867"}


id: GO:0046727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein subunits that comprise the closed shell or coat (capsid) of certain viruses.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capsomere","secondary_identifiers":["Wikipedia:Capsomere"],"synonyms":[{"name":"capsomer","type":"exact"}],"termid":"GO:0046727"}


id: FYPO:0000239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from MCB promoter","synonyms":[{"name":"expression of MBF target genes increased","type":"related"},{"name":"increased transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0000239"}


id: PR:O14353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A biotin--protein ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12835:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin--protein ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.07c","secondary_identifiers":["UniProtKB:O14353"],"synonyms":[{"name":"SPBC30D10.07c","type":"related"},{"name":"Spom972h-HLCS","type":"exact"},{"name":"biotin apo-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14353"}


id: GO:0043634
data:
  {"annotated_genes":["SJAG_16455","SJAG_01176","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84570,95742,109391],"is_not":false,"summary":null,"term":"GO:0043634"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a noncoding RNA (ncRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target ncRNA.","definition_xrefs":["GOC:jl","GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent ncRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"poly(A)-dependent ncRNA catabolic process","type":"related"}],"termid":"GO:0043634","terms_by_termid":{"GO:0043634":null}}


id: PBO:0040505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis and caspase activation inhibitor","termid":"PBO:0040505"}


id: PBO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rhp51","termid":"PBO:0003697"}


id: GO:0061308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell development","termid":"GO:0014032"},{"relation_name":"part_of","term_name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}


id: PBO:0029369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029369"}


id: PBO:0054507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1907","termid":"PBO:0054507"}


id: FYPO:0004072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during a cellular response to a pheromone. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to pheromone","synonyms":[{"name":"transcripts absent from cell during cellular response to pheromone","type":"exact"},{"name":"undetectable RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0004072"}


id: GO:0004244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the maturation of mitochondrial precursor proteins delivered to the intermembrane space.","definition_xrefs":["PMID:12191769"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial inner membrane peptidase activity (obsolete GO:0004244)","synonyms":[{"name":"IMP","type":"broad"},{"name":"mitochondrial inner membrane peptidase activity","type":"exact"}],"termid":"GO:0004244"}


id: PBO:0032695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_midzone_assembly","termid":"PBO:0032695"}


id: FYPO:0001395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal activation of monopolar cell growth","synonyms":[{"name":"normal activation of monopolar vegetative cell growth","type":"exact"},{"name":"normal initiation of growth from old end following cell division","type":"exact"}],"termid":"FYPO:0001395"}


id: FYECO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which SDS (sodium dodecyl sulfate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ SDS","synonyms":[{"name":"sodium dodecyl sulfate added","type":"exact"}],"termid":"FYECO:0000167"}


id: PATO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a medium degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate increased temperature","termid":"PATO:0001316"}


id: PBO:0070809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 39","termid":"PBO:0070809"}


id: GO:1905436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K4 trimethylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K4 trimethylation (obsolete GO:1905436)","synonyms":[{"name":"down regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"down-regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"downregulation of histone H3-K4 trimethylation","type":"exact"},{"name":"inhibition of histone H3-K4 trimethylation","type":"narrow"}],"termid":"GO:1905436"}


id: PBO:0076823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5B","termid":"PBO:0076823"}


id: PBO:0078135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 14/delta variable 4","termid":"PBO:0078135"}


id: PBO:0091973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2","termid":"PBO:0091973"}


id: PBO:0087212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent protein methyltransferase; capable of automethylation; member of the seven beta-strand family; YNL092W is not an essential gene","termid":"PBO:0087212"}


id: PBO:0085150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside monophosphate and nucleoside diphosphate kinase; functions in the de novo biosynthesis of pyrimidine deoxyribonucleotides; thymidylate/uridylate kinase that converts nucleoside monophosphates, dTMP and dUMP to nucleoside diphosphates, dTDP and dUDP; nucleoside diphosphate kinase that converts nucleoside diphosphates, dTDP and dUDP to dTTP and dUTP; essential for mitotic and meiotic DNA replication; homologous to S. pombe tmp1; human homolog DTYMK can complement the cdc8 null mutant","termid":"PBO:0085150"}


id: MOD:01046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-chloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tyrosine","termid":"MOD:01028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-chloro-L-tyrosine","synonyms":[{"name":"3'-ClTyr","type":"exact"}],"termid":"MOD:01046"}


id: MOD:01907
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methioninium (protonated L-methionine) residue to dehydromethionine.","definition_xrefs":["PubMed:19775156","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"},{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine (from L-methioninium)","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01907"}


id: PBO:0081743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 674","termid":"PBO:0081743"}


id: GO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Fungi) (obsolete GO:0030464)","synonyms":[{"name":"aging dependent sterility (sensu Fungi)","type":"exact"}],"termid":"GO:0030464"}


id: PBO:0041049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7","termid":"PBO:0041049"}


id: GO:1904603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of advanced glycation end-product receptor activity.","definition_xrefs":["GOC:krc","GOC:TermGenie","PMID:16503878","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of advanced glycation end-product receptor activity","synonyms":[{"name":"regulation of AGE receptor activity","type":"exact"},{"name":"regulation of RAGE activity","type":"exact"}],"termid":"GO:1904603"}


id: PBO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27/L28","termid":"PBO:0004399"}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: PBO:0042502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 22","termid":"PBO:0042502"}


id: GO:1904744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","GO_REF:0000059","PMID:24415760","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomeric DNA binding","synonyms":[{"name":"activation of telomere binding","type":"narrow"},{"name":"activation of telomeric DNA binding","type":"narrow"},{"name":"activation of telomeric repeat binding","type":"narrow"},{"name":"positive regulation of telomere binding","type":"exact"},{"name":"positive regulation of telomeric repeat binding","type":"exact"},{"name":"up regulation of telomere binding","type":"exact"},{"name":"up regulation of telomeric DNA binding","type":"exact"},{"name":"up regulation of telomeric repeat binding","type":"exact"},{"name":"up-regulation of telomere binding","type":"exact"},{"name":"up-regulation of telomeric DNA binding","type":"exact"},{"name":"up-regulation of telomeric repeat binding","type":"exact"},{"name":"upregulation of telomere binding","type":"exact"},{"name":"upregulation of telomeric DNA binding","type":"exact"},{"name":"upregulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904744"}


id: MOD:02073
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-selenocysteine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-selenocysteine residue","termid":"MOD:02073"}


id: GO:1903542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"negatively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of exosomal secretion","synonyms":[{"name":"down regulation of exosomal protein secretion","type":"narrow"},{"name":"down regulation of exosomal secretion","type":"exact"},{"name":"down regulation of exosomal secretory pathway","type":"exact"},{"name":"down regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down regulation of secretion of exosome","type":"exact"},{"name":"down-regulation of exosomal protein secretion","type":"narrow"},{"name":"down-regulation of exosomal secretion","type":"exact"},{"name":"down-regulation of exosomal secretory pathway","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down-regulation of secretion of exosome","type":"exact"},{"name":"downregulation of exosomal protein secretion","type":"narrow"},{"name":"downregulation of exosomal secretion","type":"exact"},{"name":"downregulation of exosomal secretory pathway","type":"exact"},{"name":"downregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"downregulation of secretion of exosome","type":"exact"},{"name":"inhibition of exosomal protein secretion","type":"narrow"},{"name":"inhibition of exosomal secretion","type":"narrow"},{"name":"inhibition of exosomal secretory pathway","type":"narrow"},{"name":"inhibition of extracellular vesicular exosome secretion","type":"narrow"},{"name":"inhibition of secretion of exosome","type":"narrow"},{"name":"negative regulation of exosomal protein secretion","type":"narrow"},{"name":"negative regulation of exosomal secretory pathway","type":"exact"},{"name":"negative regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"negative regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903542"}


id: GO:0052597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a diamine + H2O + O2 = a monoamine + NH3 + hydrogen peroxide.","definition_xrefs":["MetaCyc:RXN-9599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"diamine oxidase activity","secondary_identifiers":["EC:1.4.3.22"],"synonyms":[{"name":"diamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052597"}


id: PBO:0000981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim17 (predicted)","termid":"PBO:0000981"}


id: GO:0031749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a D2 dopamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine receptor binding","termid":"GO:0050780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"D2 dopamine receptor binding","synonyms":[{"name":"D2 dopamine receptor ligand","type":"narrow"}],"termid":"GO:0031749"}


id: PBO:0081525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF433 and ZNF878 antisense RNA 1","termid":"PBO:0081525"}


id: PBO:0039184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKAP13 antisense RNA 1","termid":"PBO:0039184"}


id: PBO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1","termid":"PBO:0046682"}


id: GO:1905526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Golgi lumen acidification.","definition_xrefs":["GOC:dph","GO_REF:0000058","PMID:23447592","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH reduction","termid":"GO:0032847"},{"relation_name":"regulates","term_name":"Golgi lumen acidification","termid":"GO:0061795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Golgi lumen acidification","termid":"GO:1905526"}


id: PBO:0047587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 4","termid":"PBO:0047587"}


id: GO:0106061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exit from meiosis.","definition_xrefs":["GOC:al","PMID:11493649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exit from meiosis","termid":"GO:0106060"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"negatively_regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of exit from meiosis","termid":"GO:0106061"}


id: SO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Component of the inversion site located at the right of a region susceptible to site-specific inversion.","definition_xrefs":["Phigo:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_site_part","termid":"SO:0001048"},{"relation_name":"part_of","term_name":"inversion_site","termid":"SO:0000948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRRinv_site","synonyms":[{"name":"IRRinv site","type":"exact"}],"termid":"SO:0001047"}


id: GO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}


id: GO:0035415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic prometaphase, the stage following prophase in mitosis (in higher eukaryotes) during which the nuclear envelope is disrupted and breaks into membrane vesicles, and the spindle microtubules enter the nuclear region.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic prometaphase (obsolete GO:0035415)","synonyms":[{"name":"regulation of mitotic prometaphase","type":"exact"}],"termid":"GO:0035415"}


id: GO:0102038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrobenzyl alcohol + O2 = 4-nitrobenzaldehyde + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-nitrobenzyl alcohol oxidase activity","secondary_identifiers":["MetaCyc:R362-RXN"],"termid":"GO:0102038"}


id: PBO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by MBF complex","termid":"PBO:0001302"}


id: PBO:0040991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 1","termid":"PBO:0040991"}


id: PBO:0027703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proteasome_localization","termid":"PBO:0027703"}


id: PBO:0014282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm34 (predicted)","termid":"PBO:0014282"}


id: PBO:0111438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger Vcx1","termid":"PBO:0111438"}


id: PBO:0065920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGGTB pseudogene 1","termid":"PBO:0065920"}


id: MOD:01941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0593#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asp)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01941"}


id: GO:1902573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GOC:krc","PMID:20179351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of serine-type peptidase activity","termid":"GO:1902571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine-type peptidase activity","synonyms":[{"name":"activation of serine protease activity","type":"narrow"},{"name":"activation of serine-type peptidase activity","type":"narrow"},{"name":"positive regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine-type peptidase activity","type":"exact"},{"name":"up-regulation of serine protease activity","type":"narrow"},{"name":"up-regulation of serine-type peptidase activity","type":"exact"},{"name":"upregulation of serine protease activity","type":"narrow"},{"name":"upregulation of serine-type peptidase activity","type":"exact"}],"termid":"GO:1902573"}


id: GO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:14708592","ISBN:0781735149","PMID:14680625","PMID:7507411","PMID:8600538","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration","synonyms":[{"name":"immune cell migration","type":"exact"},{"name":"immune cell trafficking","type":"exact"},{"name":"leucocyte migration","type":"exact"},{"name":"leucocyte trafficking","type":"exact"},{"name":"leukocyte trafficking","type":"exact"}],"termid":"GO:0050900"}


id: GO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature natural killer T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","PMID:15771592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell activation involved in immune response","synonyms":[{"name":"NK T cell activation during immune response","type":"related"},{"name":"NK T lymphocyte activation during immune response","type":"related"},{"name":"NK T-cell activation during immune response","type":"related"},{"name":"NK T-lymphocyte activation during immune response","type":"related"},{"name":"natural killer T lymphocyte activation during immune response","type":"related"},{"name":"natural killer T-cell activation during immune response","type":"related"},{"name":"natural killer T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002288"}


id: GO:0005751
data:
  {"annotated_genes":["SJAG_MIT13","SJAG_MIT20","SJAG_05629","SJAG_MIT04","SJAG_01190","SJAG_00976","SJAG_07007","SJAG_03337","SJAG_02504","SJAG_01077","SJAG_01355"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84389,85395,88091,104402,110345,110773,111567,112933,115107,115128,115152],"is_not":false,"summary":null,"term":"GO:0005751"}]},"cv_name":"cellular_component","definition":"A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex IV","termid":"GO:0045277"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial respirasome","termid":"GO:0005746"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005752"],"termid":"GO:0005751","terms_by_termid":{"GO:0005751":null}}


id: PBO:0077087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 2","termid":"PBO:0077087"}


id: SO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U14 small nucleolar RNA (U14 snoRNA) is required for early cleavages of eukaryotic precursor rRNAs. In yeasts, this molecule possess a stem-loop region (known as the Y-domain) which is essential for function. A similar structure, but with a different consensus sequence, is found in plants, but is absent in vertebrates.","definition_xrefs":["PMID:2551119"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"U14_snoRNA_primary_transcript","termid":"SO:0005837"},{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA","secondary_identifiers":["SO:0005839"],"synonyms":[{"name":"U14 small nucleolar RNA","type":"exact"},{"name":"U14 snoRNA","type":"exact"},{"name":"small nucleolar RNA U14","type":"exact"},{"name":"snoRNA U14","type":"exact"}],"termid":"SO:0000403"}


id: GO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum secundum is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"septum secundum development","termid":"GO:0003285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum secundum morphogenesis","termid":"GO:0003290"}


id: GO:0052857
data:
  {"annotated_genes":["SJAG_02462"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85485],"is_not":false,"summary":null,"term":"GO:0052857"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-NADPHX = (S)-NADPHX.","definition_xrefs":["PMID:21994945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"NADPHX epimerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6806966","EC:5.1.99.6","RHEA:32227"],"termid":"GO:0052857","terms_by_termid":{"GO:0052857":null}}


id: PBO:0073905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 3","termid":"PBO:0073905"}


id: PBO:0078322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 4","termid":"PBO:0078322"}


id: SO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylguanosine","secondary_identifiers":["RNAMOD:032"],"synonyms":[{"name":"2'-O-methylguanosine","type":"exact"},{"name":"Gm","type":"exact"},{"name":"two prime O methylguanosine","type":"exact"}],"termid":"SO:0001327"}


id: GO:0010521
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91239],"is_not":false,"summary":null,"term":"GO:0010521"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of telomerase.","definition_xrefs":["GOC:krc","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0004857","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"telomerase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010521","terms_by_termid":{"GO:0010521":null}}


id: PBO:0046783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 3","termid":"PBO:0046783"}


id: GO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.","definition_xrefs":["GOC:rph","PMID:21123617","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen-containing extracellular matrix","termid":"GO:0062023"}


id: PBO:0086842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pulcherrimin transporter; involved in uptake of iron-transporting siderophore, pulcherrimin","termid":"PBO:0086842"}


id: GO:0005144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-13 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-13 receptor binding","synonyms":[{"name":"IL-13","type":"narrow"},{"name":"interleukin-13 receptor ligand","type":"narrow"}],"termid":"GO:0005144"}


id: PBO:0085748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in activation of the plasma membrane H(+)-ATPase Pma1p in response to glucose metabolism; plays a role in ion homeostasis; protein abundance increases in response to DNA replication stress","termid":"PBO:0085748"}


id: PR:P79005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator taz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.07c","synonyms":[{"name":"Spom972h-taz1","type":"exact"}],"termid":"PR:P79005"}


id: GO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nodular inflammatory lesions, usually small or granular, firm, persistent, well-structured, and containing compactly grouped T lymphocytes and modified phagocytes such as epithelioid cells, giant cells, and other macrophages. Granuloma formation represents a chronic inflammatory response initiated by various infectious and noninfectious agents. The center of a granuloma consists of fused macrophages, which can become necrotic.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:081533642X","ISBN:068340007X","ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granuloma formation","termid":"GO:0002432"}


id: PBO:0082974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic serine/threonine protein kinase; identified as a high-copy suppressor of the synthetic lethality of a sis2 sit4 double mutant, suggesting a role in G1/S phase progression; VHS1 has a paralog, SKS1, that arose from the whole genome duplication","termid":"PBO:0082974"}


id: PBO:0005303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp28 (predicted)","termid":"PBO:0005303"}


id: PBO:0004489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-adrenodoxin reductase Arh1","termid":"PBO:0004489"}


id: GO:1900728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cardiac neural crest cell delamination that is involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:18539270","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac neural crest cell delamination","termid":"GO:0036036"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cardiac neural crest cell delamination involved in outflow tract morphogenesis","termid":"GO:1900728"}


id: GO:0015361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.47.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"low-affinity sodium:dicarboxylate symporter activity","secondary_identifiers":["Reactome:R-HSA-433131"],"synonyms":[{"name":"low affinity sodium:dicarboxylate cotransporter activity","type":"broad"},{"name":"low affinity sodium:dicarboxylate symporter activity","type":"exact"}],"termid":"GO:0015361"}


id: PBO:0091312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA primary transcript","termid":"PBO:0091312"}


id: PBO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse transcriptional regulator, HCNGP-like (predicted)","termid":"PBO:0001245"}


id: GO:0008996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of single-stranded RNA that is monophosphorylated at its 5'-end; cleavage occurs predominantly at positions 5 and 6 nucleotides from the 5'-end and in A + U-rich regions, and is blocked by the presence of a 5'-triphosphate group.","definition_xrefs":["PMID:10722715","PMID:16854990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"ribonuclease G activity","termid":"GO:0008996"}


id: GO:0015592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of methylgalactoside from one side of a membrane to the other. Methylgalactoside is a compound in which the H of the OH group on carbon-1 of galactose is replaced by a methyl group.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"methylgalactoside transmembrane transporter activity","synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"}],"termid":"GO:0015592"}


id: PBO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4L antisense RNA 1","termid":"PBO:0044684"}


id: PATO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having fewer processual parts.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"having decreased processual parts","termid":"PATO:0001570"}


id: PBO:0071134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 136","termid":"PBO:0071134"}


id: PBO:0003381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor for dynein Mcp5/Num1","termid":"PBO:0003381"}


id: GO:1902216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["PMID:17210636","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"positively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"activation of IL-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902216"}


id: PBO:0042087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 154","termid":"PBO:0042087"}


id: PBO:0029868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_at_centromere_outer_repeat","termid":"PBO:0029868"}


id: PATO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of violet hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"violet","termid":"PATO:0001424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light violet","termid":"PATO:0001704"}


id: PBO:0077944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 4-1","termid":"PBO:0077944"}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_03406","SJAG_04015","SJAG_04955","SJAG_01397","SJAG_01471","SJAG_01817","SJAG_02782","SJAG_01913","SJAG_02023","SJAG_00212","SJAG_01447","SJAG_00516","SJAG_00136","SJAG_05294"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84232,86022,86335,88198,91806,92762,95052,96065,96142,97765,98797,100041,105998,114813],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: GO:0072316
data:
  {"annotated_genes":["SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107433],"is_not":false,"summary":null,"term":"GO:0072316"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans in the ascus wall that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan catabolic process","termid":"GO:0030980"},{"relation_name":"is_a","term_name":"extracellular polysaccharide catabolic process involved in ascospore release from ascus","termid":"GO:0072000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan catabolic process involved in ascospore release from ascus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan breakdown involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan catabolism involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan degradation involved in ascospore release from ascus","type":"exact"}],"termid":"GO:0072316","terms_by_termid":{"GO:0072316":null}}


id: GO:1905497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of triplex DNA binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:26503245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of triplex DNA binding","termid":"GO:1905496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of triplex DNA binding","synonyms":[{"name":"down regulation of triplex DNA binding","type":"exact"},{"name":"down-regulation of triplex DNA binding","type":"exact"},{"name":"downregulation of triplex DNA binding","type":"exact"},{"name":"inhibition of triplex DNA binding","type":"narrow"}],"termid":"GO:1905497"}


id: PATO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased male fertility","synonyms":[{"name":"high male fertility","type":"exact"}],"termid":"PATO:0001832"}


id: GO:0004364
data:
  {"annotated_genes":["SJAG_00179","SJAG_05181","SJAG_03863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95407,106717,109999,112242,114826],"is_not":false,"summary":null,"term":"GO:0004364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.","definition_xrefs":["EC:2.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00179":null,"SJAG_03863":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutathione transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176054","Reactome:R-HSA-9748996","Reactome:R-HSA-9026780","Reactome:R-HSA-9026911","Reactome:R-HSA-9026901","Reactome:R-HSA-176059","Reactome:R-HSA-5423653","MetaCyc:GSHTRAN-RXN","Reactome:R-HSA-3301943","Reactome:R-HSA-9026777","Reactome:R-HSA-9753280"],"synonyms":[{"name":"RX:glutathione R-transferase activity","type":"related"},{"name":"S-(hydroxyalkyl)glutathione lyase activity","type":"related"},{"name":"glutathione S-alkyl transferase activity","type":"related"},{"name":"glutathione S-alkyltransferase activity","type":"related"},{"name":"glutathione S-aralkyltransferase activity","type":"related"},{"name":"glutathione S-aryltransferase activity","type":"related"},{"name":"glutathione S-transferase activity","type":"related"},{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0004364","terms_by_termid":{"GO:0004364":null}}


id: FYPO:0007035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing 5-fluorouracil.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on 5-fluorouracil","synonyms":[{"name":"normal cell population growth in presence of 5-fluorouracil","type":"exact"},{"name":"normal cell population growth on 5-FU","type":"exact"},{"name":"normal cell population growth on 5-fluorouracil","type":"exact"},{"name":"normal vegetative cell population growth on 5-fluorouracil","type":"exact"}],"termid":"FYPO:0007035"}


id: GO:0035807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:bf","PMID:12362232","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of blood coagulation in another organism","termid":"GO:0035806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of blood coagulation in another organism","synonyms":[{"name":"induction of blood clotting in another organism","type":"exact"},{"name":"positive regulation by organism of blood clotting in other organism","type":"exact"},{"name":"positive regulation by organism of blood coagulation in other organism","type":"exact"},{"name":"positive regulation of blood clotting in other organism","type":"exact"},{"name":"positive regulation of blood coagulation in another organism","type":"related"},{"name":"positive regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0035807"}


id: FYPO:0007999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is abolished during karyogamy.","definition_xrefs":["PomBase:mlr","PMID:25869666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abolished protein localization to spindle pole body during karyogamy","termid":"FYPO:0007999"}


id: PBO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_nuclear_fusion_during_mating","termid":"PBO:0031697"}


id: PBO:0034275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_preceded_by","termid":"PBO:0034275"}


id: PATO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is extremely bad or unpleasant in type or degree or effect or force.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe intensity","termid":"PATO:0000396"}


id: PBO:0089265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in translation Mdm28","termid":"PBO:0089265"}


id: PBO:0110325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR2 pseudogene 1","termid":"PBO:0110325"}


id: PBO:0050696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 9 pseudogene 2","termid":"PBO:0050696"}


id: PBO:0026946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sunitinib","termid":"PBO:0026946"}


id: PBO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_kinase_activity","termid":"PBO:0030853"}


id: GO:0015908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fatty acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fatty acid transport","termid":"GO:0015908"}


id: PBO:0091653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3","termid":"PBO:0091653"}


id: GO:0046495
data:
  {"annotated_genes":["SJAG_03096","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109217],"is_not":false,"summary":null,"term":"GO:0046495"},{"annotations":[104622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinamide riboside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide metabolic process","type":"exact"},{"name":"nicotinamide riboside metabolism","type":"exact"}],"termid":"GO:0046495","terms_by_termid":{"GO:0046495":null,"GO:0071590":null}}


id: PBO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-0 (non-functional)","termid":"PBO:0051308"}


id: GO:0035264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an entire multicellular organism, as opposed to cell growth.","definition_xrefs":["GOC:bf","GOC:tb","GOC:dph","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism growth","synonyms":[{"name":"body growth","type":"related"}],"termid":"GO:0035264"}


id: GO:0006683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosylceramide metabolic process","termid":"GO:0006681"},{"relation_name":"is_a","term_name":"galactolipid catabolic process","termid":"GO:0019376"},{"relation_name":"is_a","term_name":"glycosylceramide catabolic process","termid":"GO:0046477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"galactosylceramide catabolic process","synonyms":[{"name":"galactosylceramide breakdown","type":"exact"},{"name":"galactosylceramide catabolism","type":"exact"},{"name":"galactosylceramide degradation","type":"exact"}],"termid":"GO:0006683"}


id: PR:Q1MTR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease ATP23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04204","PANTHER:PTHR21711:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease atp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.12","secondary_identifiers":["UniProtKB:Q1MTR0"],"synonyms":[{"name":"Spom972h-XRCC6BP1","type":"exact"}],"termid":"PR:Q1MTR0"}


id: PR:O14020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.17c gene.","definition_xrefs":["UniProtKB:O14020","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.17c","synonyms":[{"name":"Spom972h-SPAC29A4.17c","type":"exact"}],"termid":"PR:O14020"}


id: PBO:0055502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2936","termid":"PBO:0055502"}


id: FYPO:0007792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells the population are subject to magnesium starvation.","definition_xrefs":["PomBase:mah","PMID:33970532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability upon magnesium starvation","synonyms":[{"name":"decreased viability upon magnesium starvation","type":"exact"},{"name":"loss of cell population viability upon magnesium starvation","type":"exact"},{"name":"loss of viability upon magnesium depletion","type":"exact"},{"name":"loss of viability upon magnesium deprivation","type":"exact"},{"name":"loss of viability upon magnesium limitation","type":"exact"},{"name":"reduced viability upon magnesium starvation","type":"exact"}],"termid":"FYPO:0007792"}


id: SO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in mitochondrial sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Mitochondrial_gene"],"synonyms":[{"name":"mitochondrial gene","type":"exact"},{"name":"mt gene","type":"exact"}],"termid":"SO:0000088"}


id: GO:0052473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the B-cell mediated immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont B-cell mediated immune response (obsolete GO:0052473)","synonyms":[{"name":"negative regulation by organism of symbiont B-cell mediated immune response","type":"exact"}],"termid":"GO:0052473"}


id: MOD:00329
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a glutamic acid residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:11821421","RESID:AA0324","PubMed:11980497","Unimod:436#E","PubMed:11139583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyheme-L-glutamate ester","synonyms":[{"name":"5-hydroxymethyl protoporphyrin IX 5-glutamate ester","type":"exact"},{"name":"BINDING Heme (covalent; via 1 link)","type":"exact"},{"name":"Hydroxyheme","type":"related"},{"name":"[3-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-7,12-diethenyl-8,13,17-trimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"cytochrome P450 CYP4A family heme cofactor","type":"exact"},{"name":"hydroxyheme","type":"related"},{"name":"hydroxyheme-L-glutamate ester","type":"exact"}],"termid":"MOD:00329"}


id: GO:0075063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive hypha growth (obsolete GO:0075063)","synonyms":[{"name":"positive regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"positive regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075063"}


id: GO:0015827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tryptophan, 2-amino-3-(1H-indol-3-yl)propanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tryptophan transport","synonyms":[{"name":"L-tryptophan transport","type":"narrow"}],"termid":"GO:0015827"}


id: PBO:0068090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 396","termid":"PBO:0068090"}


id: PBO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 1","termid":"PBO:0044220"}


id: PBO:0075638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 3","termid":"PBO:0075638"}


id: PBO:0068743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 6, pseudogene","termid":"PBO:0068743"}


id: SO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of three nucleotide bases in tRNA. It has sequence T-Psi-C.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_loop","synonyms":[{"name":"T loop","type":"exact"},{"name":"TpsiC loop","type":"exact"}],"termid":"SO:0001177"}


id: PBO:0039743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L5","termid":"PBO:0039743"}


id: PBO:0052730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 22","termid":"PBO:0052730"}


id: GO:0018743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9R,10R-dihydrodiolphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-9,10-epoxide hydrolase activity","termid":"GO:0019119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenanthrene-9,10-epoxide hydrolase (9R,10R-forming) activity","termid":"GO:0018743"}


id: GO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulatory region nucleic acid binding","termid":"GO:0001067"},{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"regulatory region RNA binding","termid":"GO:0001069"}


id: GO:0039568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces STAT1-dependent gene transcription, by preventing STAT1 from binding to promoter sites in the nucleus.","definition_xrefs":["PMID:17287281"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT1 activity by inhibition of DNA binding (obsolete GO:0039568)","synonyms":[{"name":"inhibition of DNA binding of STAT1","type":"exact"},{"name":"suppression by virus of host STAT1 activity by negative regulation of DNA binding","type":"exact"}],"termid":"GO:0039568"}


id: PBO:0066319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabenosyn, RAB effector","termid":"PBO:0066319"}


id: PBO:0048020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric chelate reductase 1 like","termid":"PBO:0048020"}


id: GO:0007578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A haploid's inability to mate due to the loss of silencing at the mating-type loci, resulting in expression of both of the normally silent mating-type cassettes.","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Saccharomyces) (obsolete GO:0007578)","synonyms":[{"name":"aging dependent sterility (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007578"}


id: PBO:0084490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein; down-regulates Rad51p-mediated mitotic recombination when the meiotic recombination machinery is impaired; promotes synapsis and required for the normal morphogenesis of synaptonemal complex; prevents the recruitment of Rad54p to site-specific DNA double-strand breaks in vivo; early meiotic gene, transcribed specifically during meiotic prophase","termid":"PBO:0084490"}


id: PBO:0050620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 12","termid":"PBO:0050620"}


id: PBO:0058111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4326","termid":"PBO:0058111"}


id: PBO:0038292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_rescued_phenotype_id","termid":"PBO:0038292"}


id: PBO:0027104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_tDNA","termid":"PBO:0027104"}


id: PR:O74467
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set5 gene.","definition_xrefs":["UniProtKB:O74467","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.05","synonyms":[{"name":"Spom972h-set5","type":"exact"}],"termid":"PR:O74467"}


id: FYPO:0002854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate-cysteine ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished glutamate-cysteine ligase activity","synonyms":[{"name":"glutamate-cysteine ligase activity abolished","type":"exact"}],"termid":"FYPO:0002854"}


id: GO:0004655
data:
  {"annotated_genes":["SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87131],"is_not":false,"summary":null,"term":"GO:0004655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 5-aminolevulinate = 2 H2O + H+ + porphobilinogen.","definition_xrefs":["RHEA:24064","EC:4.2.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"porphobilinogen synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00036","Reactome:R-HSA-189439","MetaCyc:PORPHOBILSYNTH-RXN"],"synonyms":[{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing)","type":"related"},{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing; porphobilinogen-forming)","type":"related"},{"name":"5-levulinic acid dehydratase activity","type":"related"},{"name":"aminolevulinate dehydratase activity","type":"exact"},{"name":"aminolevulinic dehydratase activity","type":"related"},{"name":"delta-aminolevulinate dehydratase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydrase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydratase activity","type":"exact"},{"name":"delta-aminolevulinic dehydratase activity","type":"related"}],"termid":"GO:0004655","terms_by_termid":{"GO:0004655":null}}


id: SO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that is not part of the core promoter, but provides the promoter with a specific regulatory region.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_promoter_element","synonyms":[{"name":"regulatory promoter element","type":"related"}],"termid":"SO:0001678"}


id: PBO:0056421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 2","termid":"PBO:0056421"}


id: PBO:0069765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1048, pseudogene","termid":"PBO:0069765"}


id: PBO:0051846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 2","termid":"PBO:0051846"}


id: GO:0003821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete class II major histocompatibility complex antigen (obsolete GO:0003821)","synonyms":[{"name":"class II major histocompatibility complex antigen","type":"exact"}],"termid":"GO:0003821"}


id: PBO:0053601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 630","termid":"PBO:0053601"}


id: _global:has_regulatory_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_activity","termid":"_global:has_component_activity"},{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_regulatory_component_activity","secondary_identifiers":["RO:0002013"],"termid":"_global:has_regulatory_component_activity"}


id: PR:O13782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpp1 gene.","definition_xrefs":["UniProtKB:O13782","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.04c","synonyms":[{"name":"CAAX farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FTase-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpp1","type":"exact"},{"name":"ras proteins prenyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13782"}


id: GO:0071860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proctolin receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proctolin receptor binding","termid":"GO:0071860"}


id: PATO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000061 relative pattern (obsolete PATO:0000061)","termid":"PATO:0000061"}


id: PBO:0078112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-2","termid":"PBO:0078112"}


id: PBO:0012254
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octameric","termid":"PBO:0012254"}


id: GO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tropomyosin binding","termid":"GO:0005523"}


id: PBO:0058497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5691","termid":"PBO:0058497"}


id: GO:0141118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Fe(II)-heme b-[protein] + nitric oxide + O2 = Fe(III)-heme b-[protein] + nitrate.","definition_xrefs":["PMID:20511233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitric oxide dioxygenase activity, heme protein as donor","secondary_identifiers":["RHEA:78091"],"termid":"GO:0141118"}


id: PATO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000907 f2 fertile (obsolete PATO:0000907)","termid":"PATO:0000907"}


id: PBO:0091226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR proximal","termid":"PBO:0091226"}


id: GO:1900134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"negatively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renin secretion into blood stream","synonyms":[{"name":"down regulation of renin release into blood stream","type":"exact"},{"name":"down regulation of renin secretion into blood stream","type":"exact"},{"name":"down-regulation of renin release into blood stream","type":"exact"},{"name":"down-regulation of renin secretion into blood stream","type":"exact"},{"name":"downregulation of renin release into blood stream","type":"exact"},{"name":"downregulation of renin secretion into blood stream","type":"exact"},{"name":"inhibition of renin release into blood stream","type":"narrow"},{"name":"inhibition of renin secretion into blood stream","type":"narrow"},{"name":"negative regulation of renin release into blood stream","type":"exact"}],"termid":"GO:1900134"}


id: GO:0016505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase that is involved in the apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"peptidase activator activity involved in apoptotic process","synonyms":[{"name":"apoptotic protease activator activity","type":"narrow"}],"termid":"GO:0016505"}


id: PBO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Dim1","termid":"PBO:0005309"}


id: GO:0033657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a component of the host cell chloroplast. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by symbiont of host chloroplast part (obsolete GO:0033657)","synonyms":[{"name":"modification by symbiont of host chloroplast part","type":"related"}],"termid":"GO:0033657"}


id: GO:0062101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-aspartate + 2-oxoglutarate + O2 = protein 3-hydroxy-L-aspartate + succinate + CO2.","definition_xrefs":["PMID:1378441","PMID:1856229","RHEA:11508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491","GO:0140096"],"is_obsolete":false,"name":"peptidyl-aspartic acid 3-dioxygenase activity","secondary_identifiers":["EC:1.14.11.16","Reactome:R-HSA-9631355","MetaCyc:PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN","RESID:AA0026","GO:0004597"],"synonyms":[{"name":"aspartate beta-hydroxylase activity","type":"related"},{"name":"aspartyl/asparaginyl beta-hydroxylase activity","type":"related"},{"name":"aspartylpeptide beta-dioxygenase activity","type":"related"},{"name":"peptide-L-aspartate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"peptide-aspartate beta-dioxygenase activity","type":"exact"}],"termid":"GO:0062101"}


id: PBO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.15","termid":"PBO:0005187"}


id: PBO:0084032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein with similarity to mammalian CASP; packaged into COPII vesicles for trafficking between ER and Golgi; genetic interactions with GOS1 (encoding a Golgi snare protein) suggest a role in Golgi function","termid":"PBO:0084032"}


id: PBO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21S rRNA","termid":"PBO:0005871"}


id: GO:1901969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"regulation of polynucleotide 3'-phosphatase activity","termid":"GO:1901968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of polynucleotide 3'-phosphatase activity","synonyms":[{"name":"activation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"activation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"activation of DNA 3'-phosphatase activity","type":"exact"},{"name":"activation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"activation of polynucleotide 3'-phosphatase activity","type":"narrow"},{"name":"activation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"positive regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up-regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"upregulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"upregulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"upregulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901969"}


id: SO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a half KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"500B_downstream_variant","synonyms":[{"name":"500B downstream variant","type":"exact"},{"name":"near-gene-3","type":"exact"}],"termid":"SO:0001634"}


id: PBO:0086811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YJL043W is a non-essential gene","termid":"PBO:0086811"}


id: SO:1000038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication that occurred within a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"duplication","termid":"SO:1000035"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"},{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal_duplication","synonyms":[{"name":"intrachromosomal duplication","type":"exact"}],"termid":"SO:1000038"}


id: PBO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 48","termid":"PBO:0045858"}


id: PBO:0052326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1549 like","termid":"PBO:0052326"}


id: GO:1901077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of muscle","termid":"GO:1901077"}


id: GO:0061240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric nephron tubule are generated and organized. A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}


id: GO:0061750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide + choline phosphate + H+ in an acidic environment.","definition_xrefs":["GOC:dph","PMID:26493087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin phosphodiesterase activity","termid":"GO:0004767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"acid sphingomyelin phosphodiesterase activity","synonyms":[{"name":"acid SMase","type":"related"},{"name":"acid sphingomyelinase","type":"exact"}],"termid":"GO:0061750"}


id: PBO:0073485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin synthase 2","termid":"PBO:0073485"}


id: PBO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, SGT2 family (predicted)","termid":"PBO:0002145"}


id: PBO:0072680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUFY1 antisense RNA 1","termid":"PBO:0072680"}


id: GO:0036352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of ubiquitin group at lysine 15 (H2A-K15) in metazoans, and at the equivalent residue in other organisms. Monoubiquitin is first attached to H2A-K15 and K63-linked ubiquitin chains are then extended from this monoubiquitin.","definition_xrefs":["GOC:sp","PMID:22713238","PMID:22980979"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K15 ubiquitination (obsolete GO:0036352)","synonyms":[{"name":"histone H2A ubiquitination (H2A-K15)","type":"exact"}],"termid":"GO:0036352"}


id: PBO:0091025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane pantothenate transmembrane transporter Liz1","termid":"PBO:0091025"}


id: PBO:0070194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 116 pseudogene","termid":"PBO:0070194"}


id: PBO:0090520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase","termid":"PBO:0090520"}


id: GO:0061542
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110992],"is_not":false,"summary":null,"term":"GO:0061542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a 3-demethylubiquinol = S-adenosyl-L-homocysteine + a ubiquinol.","definition_xrefs":["PMID:10777520","RHEA:44380","GOC:dph","PMID:23190198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"3-demethylubiquinol-n 3-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2162186","EC:2.1.1.64"],"synonyms":[{"name":"2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone methyltransferase","type":"narrow"},{"name":"5-demethylubiquinone-10 methyltransferase","type":"narrow"},{"name":"5-demethylubiquinone-9 methyltransferase","type":"narrow"},{"name":"OMHMB-methyltransferase","type":"related"},{"name":"S-adenosyl-L-methionine:2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone-O-methyltransferase","type":"related"}],"termid":"GO:0061542","terms_by_termid":{"GO:0061542":null}}


id: PBO:0056499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 3","termid":"PBO:0056499"}


id: PBO:0073239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 3","termid":"PBO:0073239"}


id: PBO:0028793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_centromeric_outer_repeat_transcript_level","termid":"PBO:0028793"}


id: GO:1902164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043517"},{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:1902162"},{"relation_name":"positively_regulates","term_name":"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"narrow"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"}],"termid":"GO:1902164"}


id: GO:0071291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from selenium ion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to selenium ion","termid":"GO:0010269"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to selenium ion","termid":"GO:0071291"}


id: GO:0047387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + serine phosphoethanolamine = H+ + phosphoethanolamine + serine.","definition_xrefs":["EC:3.1.4.13","RHEA:17113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"serine-ethanolaminephosphate phosphodiesterase activity","secondary_identifiers":["MetaCyc:3.1.4.13-RXN","KEGG_REACTION:R02817"],"synonyms":[{"name":"SEP diesterase activity","type":"related"},{"name":"serine ethanolamine phosphodiester phosphodiesterase activity","type":"related"},{"name":"serine-phosphoethanolamine ethanolaminephosphohydrolase activity","type":"related"}],"termid":"GO:0047387"}


id: GO:0047485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-terminus binding (obsolete GO:0047485)","synonyms":[{"name":"N-terminal binding","type":"exact"},{"name":"N-terminal end binding","type":"exact"},{"name":"NH2-terminal binding","type":"narrow"},{"name":"NH2-terminus binding","type":"narrow"},{"name":"amino-terminal binding","type":"related"},{"name":"amino-terminus binding","type":"related"}],"termid":"GO:0047485"}


id: PBO:0078489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 8-1","termid":"PBO:0078489"}


id: PBO:0050802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 2","termid":"PBO:0050802"}


id: PBO:0068164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 471","termid":"PBO:0068164"}


id: PBO:0070363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 1","termid":"PBO:0070363"}


id: GO:1905888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to very-low-density lipoprotein particle stimulus.","definition_xrefs":["GOC:aruk","GO_REF:0000058","GOC:TermGenie","PMID:7592957","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:1905890"},{"relation_name":"negatively_regulates","term_name":"cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:0090731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"down regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"downregulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"downregulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"inhibition of cellular response to VLDL particle stimulus","type":"narrow"},{"name":"inhibition of cellular response to very-low-density lipoprotein particle stimulus","type":"narrow"},{"name":"negative regulation of cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:1905888"}


id: PBO:0074474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 DNA replication regulator and spliceosomal factor","termid":"PBO:0074474"}


id: PBO:0043643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5","termid":"PBO:0043643"}


id: GO:0051650
data:
  {"annotated_genes":["SJAG_03938","SJAG_04391","SJAG_03005","SJAG_04960","SJAG_03864","SJAG_04044","SJAG_00284","SJAG_03011","SJAG_03268","SJAG_01925","SJAG_02166","SJAG_02320","SJAG_00938","SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113835,89359],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91663],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114523],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[95678,84818,98047,110278,86914,109995,114920,113820],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[104260,112309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of vesicle localisation","type":"exact"}],"termid":"GO:0051650","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: GO:0034658
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84610],"is_not":false,"summary":null,"term":"GO:0034658"}]},"cv_name":"molecular_function","definition":"Enables the transfer of isopropylmalate from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"isopropylmalate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034658","terms_by_termid":{"GO:0034658":null}}


id: PBO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh6","termid":"PBO:0016573"}


id: PBO:0082971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; protein overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate","termid":"PBO:0082971"}


id: GO:0052035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host inflammatory response (obsolete GO:0052035)","synonyms":[{"name":"activation by symbiont of host inflammatory response","type":"narrow"},{"name":"positive regulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host inflammatory response","type":"narrow"},{"name":"up regulation by symbiont of host inflammatory response","type":"exact"},{"name":"up-regulation by symbiont of host inflammatory response","type":"exact"},{"name":"upregulation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052035"}


id: GO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation without cellular fusion.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in regulation of conjugation with mutual genetic exchange (obsolete GO:0000757)","synonyms":[{"name":"signal transduction involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000757"}


id: PBO:0068049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 354","termid":"PBO:0068049"}


id: PBO:0046214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 7","termid":"PBO:0046214"}


id: PATO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Polyploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","termid":"PATO:0001377"}


id: GO:2000068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to insect.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to insect","termid":"GO:0002213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to insect","synonyms":[{"name":"regulation of physiological defense response to insect","type":"exact"}],"termid":"GO:2000068"}


id: PBO:0052075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1","termid":"PBO:0052075"}


id: PBO:0089012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (unknown specificity)","termid":"PBO:0089012"}


id: PBO:0058963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 6, pseudogene","termid":"PBO:0058963"}


id: PBO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19","termid":"PBO:0075275"}


id: GO:0080120
data:
  {"annotated_genes":["SJAG_03396","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85737,93485],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three sequential, enzymatic, post-translational modifications essential to their targeting: First, the proteins are prenylated by one of two prenyltransferases called farnesyltransferase and geranylgeranyltransferase-I. Prenylation results in the covalent attachment of either farnesyl or geranylgeranyl isoprenoid groups to the cysteine in the CAAX box motif. Prenylation is followed by proteolytic removal of the last three amino acids of the protein (AAX). Finally, the newly exposed carboxylate group of the isoprenylcysteine is methylated by an ER-associated prenyl-dependent carboxylmethyltransferase.","definition_xrefs":["PMID:12039957","PMID:18641086","PMID:17114793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"CAAX-box protein maturation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CAAX-box protein processing","type":"related"},{"name":"farnesylated protein maturation","type":"related"}],"termid":"GO:0080120","terms_by_termid":{"GO:0071586":null}}


id: PBO:0073455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 1, lncRNA","termid":"PBO:0073455"}


id: PBO:0076276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syncollin","termid":"PBO:0076276"}


id: PBO:0004538
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Phx1","termid":"PBO:0004538"}


id: PBO:0064116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 3","termid":"PBO:0064116"}


id: GO:0098730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a male germline stem cell to produce two male germline stem cells. An example of this is found in mammalian spermatogonial stem cells, some proportion of which divide symmetrically, so amplifying the population. The choice between asymmetric and symmetric division in this case appears to be internal and stochastic.","definition_xrefs":["GOC:dos","PMID:19948499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germline stem cell symmetric division","termid":"GO:0098730"}


id: PBO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 29","termid":"PBO:0050212"}


id: GO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"positively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-3 production","secondary_identifiers":["GO:0045401"],"synonyms":[{"name":"activation of interleukin-3 production","type":"narrow"},{"name":"positive regulation of IL-3 production","type":"exact"},{"name":"positive regulation of interleukin-3 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-3 production","type":"narrow"},{"name":"up regulation of interleukin-3 production","type":"exact"},{"name":"up-regulation of interleukin-3 production","type":"exact"},{"name":"upregulation of interleukin-3 production","type":"exact"}],"termid":"GO:0032752"}


id: GO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of an oxidizable substrate, for example, fructose.","definition_xrefs":["GOC:jl","PMID:11029423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to oxidizable substrate","synonyms":[{"name":"taxis in response to oxidizable substrate","type":"exact"}],"termid":"GO:0042333"}


id: GO:0061521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a hepatic stellate cell.","definition_xrefs":["GOC:dph","PMID:9407545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell differentiation","termid":"GO:0061521"}


id: MOD:01776
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-methylthiocarbonylaminoethylcysteine.","definition_xrefs":["PubMed:18688235","PubMed:20608637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylthiocarbonylaminoethylcysteine (Cys)","synonyms":[{"name":"(2R)-2-amino-3-([2-([(methylsulfanyl)carbonyl]amino)ethyl]sulfanyl)propanoic acid","type":"exact"},{"name":"L-cysteine N-(methylthiocarbonyl)aziridine adduct","type":"exact"},{"name":"MTCTK","type":"exact"},{"name":"N6-methylthiocarbonyl-4-thialysine","type":"exact"},{"name":"S-[2-([(methylthio)carbonyl]amino)ethyl]-L-cysteine","type":"exact"}],"termid":"MOD:01776"}


id: PBO:0031140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_actin_filament_organization","termid":"PBO:0031140"}


id: PBO:0072003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 5","termid":"PBO:0072003"}


id: PBO:0003280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46 (predicted)","termid":"PBO:0003280"}


id: GO:0008230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex containing the products of the insect genes Ecdysone receptor (EcR) and ultraspiracle (usp). Binding of ecdysone promotes association between the two subunits, and the receptor complex then initiates molting and metamorphosis by binding DNA and regulating the transcription of target genes.","definition_xrefs":["PMID:14592980","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"ecdysone receptor holocomplex","termid":"GO:0008230"}


id: GO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one or more ubiquitin groups are added to a protein.","definition_xrefs":["PMID:26906419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein ubiquitination","synonyms":[{"name":"protein ubiquitinylation","type":"exact"},{"name":"protein ubiquitylation","type":"exact"}],"termid":"GO:0016567"}


id: PBO:0071974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 2","termid":"PBO:0071974"}


id: PBO:0005744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf21","termid":"PBO:0005744"}


id: PBO:0108682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_or_chimera","termid":"PBO:0108682"}


id: GO:1904172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:25651887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"positively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bleb assembly","synonyms":[{"name":"activation of bleb assembly","type":"narrow"},{"name":"activation of cell blebbing","type":"narrow"},{"name":"positive regulation of cell blebbing","type":"exact"},{"name":"up regulation of bleb assembly","type":"exact"},{"name":"up regulation of cell blebbing","type":"exact"},{"name":"up-regulation of bleb assembly","type":"exact"},{"name":"up-regulation of cell blebbing","type":"exact"},{"name":"upregulation of bleb assembly","type":"exact"},{"name":"upregulation of cell blebbing","type":"exact"}],"termid":"GO:1904172"}


id: GO:0103016
data:
  {"annotated_genes":["SJAG_00358","SJAG_01302","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90414,101970,104535],"is_not":false,"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H+ + L-cysteinyl-[protein].","definition_xrefs":["RHEA:47032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0140101","GO:0016740","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA-uridine 2-sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.1.13","MetaCyc:RXN0-2023"],"synonyms":[{"name":"tRNA-specific 2-thiouridylase activity","type":"related"},{"name":"tRNA-uracil-34 sulfurtransferase activity","type":"related"}],"termid":"GO:0103016","terms_by_termid":{"GO:0103016":null}}


id: PBO:0042745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPS-CORT readthrough","termid":"PBO:0042745"}


id: GO:1904389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a rod bipolar cell.","definition_xrefs":["GOC:TermGenie","PMID:16914133","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rod bipolar cell differentiation","termid":"GO:1904389"}


id: PBO:0041068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 1","termid":"PBO:0041068"}


id: PBO:0075117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 166","termid":"PBO:0075117"}


id: PBO:0053041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 2","termid":"PBO:0053041"}


id: PBO:0108980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 4","termid":"PBO:0108980"}


id: PBO:0090822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RAP1 ortholog, GTPase exchange factor, Zfs1 target number 1","termid":"PBO:0090822"}


id: SO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense overlap long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA_gene","synonyms":[{"name":"sense overlap lncRNA gene","type":"exact"},{"name":"sense overlap ncRNA gene","type":"exact"},{"name":"sense_overlap_lncRNA_gene","type":"exact"}],"termid":"SO:0002183"}


id: FYPO:0004117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with normal size, shape, or structure.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum morphology","termid":"FYPO:0006213"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"normal septum morphology","termid":"FYPO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, normal septum morphology","synonyms":[{"name":"inviable after spore germination, undivided cell, normal septum morphology","type":"exact"},{"name":"inviable after spore germination, without cell division, normal septum formation","type":"exact"},{"name":"inviable following spore germination, without cell division, normal septum morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, normal septum morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, normal septum morphology","type":"exact"}],"termid":"FYPO:0004117"}


id: PBO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK4 antisense RNA 1","termid":"PBO:0045325"}


id: PBO:0065116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCI pseudogene 1","termid":"PBO:0065116"}


id: GO:2000829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"negatively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of parathyroid hormone secretion","synonyms":[{"name":"negative regulation of PTH secretion","type":"exact"},{"name":"negative regulation of parathormone secretion","type":"exact"},{"name":"negative regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000829"}


id: GO:0009786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric cell division","termid":"GO:0009786"}


id: PBO:0060211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12A","termid":"PBO:0060211"}


id: PATO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the lateral side","termid":"PATO:0002176"}


id: PBO:0089956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0089956"}


id: PR:Q9UTN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug95 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 95 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.02","synonyms":[{"name":"Spom972h-mug95","type":"exact"}],"termid":"PR:Q9UTN7"}


id: PBO:0080470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 1","termid":"PBO:0080470"}


id: MOD:00000
data:
  {"annotated_genes":["SJAG_02763","SJAG_04551","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115412,115659,115660,115413,115661,115658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[115234,115402,115233,115235,115554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue.","definition_xrefs":["PubMed:18688235"],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_04551":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"synonyms":[{"name":"ModRes","type":"exact"}],"termid":"MOD:00000","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00046":null,"MOD:00696":null}}


id: PBO:0055201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2626","termid":"PBO:0055201"}


id: GO:0090443
data:
  {"annotated_genes":["SJAG_06270","SJAG_00229","SJAG_03508","SJAG_04455","SJAG_02514","SJAG_01790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89598,91785,97391,101139,103656,106293],"is_not":false,"summary":null,"term":"GO:0090443"}]},"cv_name":"cellular_component","definition":"A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.","definition_xrefs":["GOC:vw","PMID:22119525","PMID:21561862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FAR/SIN/STRIPAK complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAR complex","type":"related"},{"name":"SIN inhibitory phosphatase (SIP) complex","type":"exact"},{"name":"SIN inhibitory phosphatase complex","type":"exact"},{"name":"SIP complex","type":"exact"},{"name":"STRIPAK signalling complex","type":"related"},{"name":"striatin interacting phosphatase and kinase complex","type":"exact"}],"termid":"GO:0090443","terms_by_termid":{"GO:0090443":null}}


id: GO:1903170
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87368,109485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:24125847","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium ion membrane transport","type":"exact"},{"name":"down regulation of calcium ion transmembrane transport","type":"exact"},{"name":"down regulation of transmembrane calcium transport","type":"exact"},{"name":"down-regulation of calcium ion membrane transport","type":"exact"},{"name":"down-regulation of calcium ion transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane calcium transport","type":"exact"},{"name":"downregulation of calcium ion membrane transport","type":"exact"},{"name":"downregulation of calcium ion transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane calcium transport","type":"exact"},{"name":"inhibition of calcium ion membrane transport","type":"narrow"},{"name":"inhibition of calcium ion transmembrane transport","type":"narrow"},{"name":"inhibition of transmembrane calcium transport","type":"narrow"},{"name":"negative regulation of calcium ion membrane transport","type":"exact"},{"name":"negative regulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1903170","terms_by_termid":{"GO:1905949":null}}


id: PBO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 33","termid":"PBO:0060045"}


id: GO:0045938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"activation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"positive regulation of sleep","type":"exact"},{"name":"stimulation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"up regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"up-regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"upregulation of circadian sleep/wake cycle, sleep","type":"exact"}],"termid":"GO:0045938"}


id: PBO:0027618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0027618"}


id: GO:0034768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (E)-beta-ocimene + diphosphate.","definition_xrefs":["PMID:12624761","EC:4.2.3.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(E)-beta-ocimene synthase activity","secondary_identifiers":["RHEA:32691","MetaCyc:RXN-5109"],"termid":"GO:0034768"}


id: GO:0023025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class Ib major histocompatibility complex.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class Ib protein complex binding","termid":"GO:0023025"}


id: PBO:0080806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 2","termid":"PBO:0080806"}


id: GO:0019350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of teichoic acid, any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0044281","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"teichoic acid biosynthetic process","secondary_identifiers":["MetaCyc:TEICHOICACID-PWY"],"synonyms":[{"name":"teichoic acid anabolism","type":"exact"},{"name":"teichoic acid biosynthesis","type":"exact"},{"name":"teichoic acid formation","type":"exact"},{"name":"teichoic acid synthesis","type":"exact"}],"termid":"GO:0019350"}


id: GO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticosterone into the circulatory system. Corticosterone is a 21-carbon steroid hormone of the corticosteroid type produced in the cortex of the adrenal glands.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"corticosterone secretion","termid":"GO:0035934"}


id: PR:O13704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C13F5.05, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.05","synonyms":[{"name":"Spom972h-mpd1","type":"exact"}],"termid":"PR:O13704"}


id: PBO:0052978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta","termid":"PBO:0052978"}


id: PBO:0052539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 12","termid":"PBO:0052539"}


id: PBO:0068493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 77, pseudogene","termid":"PBO:0068493"}


id: PBO:0035883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ophthalmic_acid_absent_from_cell","termid":"PBO:0035883"}


id: PATO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's scalar absolute value of the rate of change of the bearer's position.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speed","synonyms":[{"name":"velocity","type":"related"}],"termid":"PATO:0000008"}


id: FYPO:0004025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of the tubulin poison carbendazim (mecarzole; MBC) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to carbendazim","synonyms":[{"name":"resistance to MBC","type":"exact"},{"name":"resistance to carbendazim during mitotic cell cycle","type":"related"},{"name":"resistance to carbendazim during vegetative growth","type":"exact"},{"name":"resistance to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"resistance to methylbenzylcarbamylate","type":"exact"},{"name":"resistant to carbendazim","type":"exact"}],"termid":"FYPO:0004025"}


id: GO:1900424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to bacterium.","definition_xrefs":["GOC:TermGenie","PMID:22346749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to bacterium","secondary_identifiers":["GO:1902477"],"synonyms":[{"name":"regulation of antibacterial peptide activity","type":"related"},{"name":"regulation of defence response to bacteria","type":"exact"},{"name":"regulation of defence response to bacterium","type":"exact"},{"name":"regulation of defence response to bacterium, incompatible interaction","type":"narrow"},{"name":"regulation of defence response to pathogenic bacteria, incompatible interaction","type":"narrow"},{"name":"regulation of defence response to pathogenic bacterium, incompatible interaction","type":"narrow"},{"name":"regulation of defense response to bacteria","type":"exact"},{"name":"regulation of defense response to bacterium, incompatible interaction","type":"narrow"},{"name":"regulation of resistance response to pathogenic bacteria","type":"narrow"},{"name":"regulation of resistance response to pathogenic bacterium","type":"narrow"}],"termid":"GO:1900424"}


id: PBO:0005846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, unknown biological role","termid":"PBO:0005846"}


id: GO:0102465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + 2 NADH + 2 H+ + 2 O2 = nostoxanthin + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"zeaxanthin 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14018"],"termid":"GO:0102465"}


id: FYPO:0004877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) is decreased at specific genes that are transcriptionally up-regulated during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"decreased chromatin binding at mitotically up-regulated genes","synonyms":[{"name":"decreased chromatin binding at mitotically upregulated gene","type":"exact"},{"name":"reduced chromatin binding at mitotically up-regulated genes","type":"exact"}],"termid":"FYPO:0004877"}


id: PBO:0036516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4","termid":"PBO:0036516"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: GO:0031358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of chloroplast outer membrane (obsolete GO:0031358)","synonyms":[{"name":"intrinsic to chloroplast outer membrane","type":"narrow"}],"termid":"GO:0031358"}


id: FYPO:0003848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrazinocurcumin. Cells stop growing (and may die) at a concentration of hydrazinocurcumin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to hydrazinocurcumin","synonyms":[{"name":"hypersensitive to hydrazinocurcumin","type":"exact"},{"name":"sensitive to hydrazinocurcumin during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrazinocurcumin during vegetative growth","type":"exact"}],"termid":"FYPO:0003848"}


id: PBO:0049114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR176 divergent transcript","termid":"PBO:0049114"}


id: PBO:0078196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-6","termid":"PBO:0078196"}


id: GO:0008378
data:
  {"annotated_genes":["SJAG_03871","SJAG_04095","SJAG_03149","SJAG_00183","SJAG_04401","SJAG_02996","SJAG_01972","SJAG_03150","SJAG_03790"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89294,94893,114135,94916,89293,94915,89292,94914,94913,98843,95056,94894,94895,89291,94892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031278"},{"annotations":[106834,106840,94900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001962"},{"annotations":[101875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_01972":null,"SJAG_02996":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04095":null,"SJAG_04401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1964501"],"termid":"GO:0008378","terms_by_termid":{"GO:0001962":null,"GO:0031278":null,"GO:0047220":null}}


id: PBO:0039036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 13, pseudogene","termid":"PBO:0039036"}


id: GO:0047921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + gentamicin C(1a) = N(2')-acetylgentamicin C(1a) + CoA + H+. This is acetylation of the 2'-amino group of the 6-deoxy-6-aminoglucose ring.","definition_xrefs":["RHEA:24516","EC:2.3.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 2'-N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03056","MetaCyc:GENTAMICIN-2-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:gentamicin-C1a N2'-acetyltransferase activity","type":"narrow"},{"name":"acetyl-CoA:gentamycin-C1a N2'-acetyltransferase activity","type":"narrow"},{"name":"gentamicin 2'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase II activity","type":"narrow"},{"name":"gentamycin 2'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin acetyltransferase II","type":"related"}],"termid":"GO:0047921"}


id: GO:0052657
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89904],"is_not":false,"summary":null,"term":"GO:0052657"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["GOC:curators","EC:2.4.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"guanine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01229","RHEA:25424","MetaCyc:GUANPRIBOSYLTRAN-RXN"],"synonyms":[{"name":"6-hydroxypurine phosphoribosyltransferase activity","type":"related"},{"name":"6-mercaptopurine phosphoribosyltransferase activity","type":"related"},{"name":"GMP pyrophosphorylase activity","type":"related"},{"name":"GPRT","type":"related"},{"name":"Transphosphoribosidase activity","type":"broad"},{"name":"guanine-hypoxanthine phosphoribosyltransferase activity","type":"broad"},{"name":"guanosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"guanosine phosphoribosyltransferase activity","type":"related"},{"name":"guanylate pyrophosphorylase activity","type":"related"},{"name":"guanylic pyrophosphorylase activity","type":"related"},{"name":"hypoxanthine-guanine phosphoribosyltransferase activity","type":"broad"},{"name":"purine-6-thiol phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0052657","terms_by_termid":{"GO:0052657":null}}


id: GO:1904692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type B pancreatic cell proliferation.","definition_xrefs":["PMID:24055447","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell proliferation","termid":"GO:0061469"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell proliferation","termid":"GO:0044342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell proliferation","synonyms":[{"name":"activation of pancreatic B cell proliferation","type":"narrow"},{"name":"activation of pancreatic beta cell proliferation","type":"narrow"},{"name":"activation of type B pancreatic cell proliferation","type":"narrow"},{"name":"positive regulation of pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"up regulation of pancreatic B cell proliferation","type":"exact"},{"name":"up regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"up regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"up-regulation of pancreatic B cell proliferation","type":"exact"},{"name":"up-regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"up-regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"upregulation of pancreatic B cell proliferation","type":"exact"},{"name":"upregulation of pancreatic beta cell proliferation","type":"exact"},{"name":"upregulation of type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:1904692"}


id: GO:0000155
data:
  {"annotated_genes":["SJAG_01587","SJAG_00331","SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87312,91404,114365],"is_not":false,"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.","definition_xrefs":["PMID:20223701","PMID:9191038","GOC:mcc","PMID:10966457","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0004672","GO:0003674","GO:0016301","GO:0003824","GO:0140299"],"is_obsolete":false,"name":"phosphorelay sensor kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"two-component sensor activity","type":"narrow"},{"name":"two-component sensor molecule","type":"narrow"},{"name":"two-component system sensor activity","type":"narrow"}],"termid":"GO:0000155","terms_by_termid":{"GO:0000155":null}}


id: PR:O94439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsc1 gene.","definition_xrefs":["UniProtKB:O94439","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein fsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.05c","synonyms":[{"name":"Spom972h-fsc1","type":"exact"}],"termid":"PR:O94439"}


id: PBO:0054918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2332","termid":"PBO:0054918"}


id: PBO:0009256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ARPC3","termid":"PBO:0009256"}


id: PBO:0044616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephospho-CoA kinase domain containing","termid":"PBO:0044616"}


id: GO:1905534
data:
  {"annotated_genes":["SJAG_03591","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87885,89465,95012],"is_not":false,"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-leucine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10467003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-leucine import across plasma membrane","termid":"GO:1905532"},{"relation_name":"positively_regulates","term_name":"L-leucine import across plasma membrane","termid":"GO:1903801"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903130"],"synonyms":[{"name":"activation of L-leucine import into cell","type":"narrow"},{"name":"activation of leucine import into cell","type":"narrow"},{"name":"positive regulation of L-leucine import into cell","type":"exact"},{"name":"positive regulation of leucine import across plasma membrane","type":"broad"},{"name":"up regulation of L-leucine import into cell","type":"exact"},{"name":"upregulation of L-leucine import into cell","type":"exact"}],"termid":"GO:1905534","terms_by_termid":{"GO:1905534":null}}


id: PBO:0082329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S maturation and release of several preribosome maturation factors; releases Rlp24p from purified pre-60S particles in vitro; target of the ribosomal biosynthesis inhibitor diazaborine; may be involved in degradation of aberrant mRNAs","termid":"PBO:0082329"}


id: SO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"First codon to be translated by a ribosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Start_codon"],"synonyms":[{"name":"initiation codon","type":"exact"},{"name":"start codon","type":"exact"}],"termid":"SO:0000318"}


id: GO:0045876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sister chromatid cohesion","synonyms":[{"name":"activation of sister chromatid cohesion","type":"narrow"},{"name":"stimulation of sister chromatid cohesion","type":"narrow"},{"name":"up regulation of sister chromatid cohesion","type":"exact"},{"name":"up-regulation of sister chromatid cohesion","type":"exact"},{"name":"upregulation of sister chromatid cohesion","type":"exact"}],"termid":"GO:0045876"}


id: GO:1900881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 18-methylnonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"18-methylnonadec-1-ene formation","type":"exact"},{"name":"18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900881"}


id: PBO:0062026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily N member 1 pseudogene","termid":"PBO:0062026"}


id: GO:0030419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.","definition_xrefs":["GOC:mah","PMID:10069850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"nicotianamine metabolic process","termid":"GO:0030417"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"nicotianamine catabolic process","synonyms":[{"name":"nicotianamine breakdown","type":"exact"},{"name":"nicotianamine catabolism","type":"exact"},{"name":"nicotianamine degradation","type":"exact"}],"termid":"GO:0030419"}


id: PBO:0066356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 3","termid":"PBO:0066356"}


id: PATO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A colour that is very pale yellowish brown.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light yellow brown","termid":"PATO:0002413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige","termid":"PATO:0002410"}


id: GO:0005991
data:
  {"annotated_genes":["SJAG_00182","SJAG_04859","SJAG_01209","SJAG_01427","SJAG_01646","SJAG_00129","SJAG_01862","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87993,87994,92666,107631],"is_not":false,"summary":null,"term":"GO:0005991"},{"annotations":[93288,92665,73488,87992,89481,105024,97184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[107630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"},{"annotations":[93289,87995,107632,89482,73487,97185,92667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070413"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:jl","ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mycose metabolic process","type":"exact"},{"name":"mycose metabolism","type":"exact"},{"name":"mykose metabolic process","type":"exact"},{"name":"mykose metabolism","type":"exact"},{"name":"trehalose metabolism","type":"exact"}],"termid":"GO:0005991","terms_by_termid":{"GO:0005991":null,"GO:0005992":null,"GO:0005993":null,"GO:0070413":null}}


id: FYPO:0004496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is smaller than normal and contains more than one septum, when the cell is in a culture in stationary phase.","definition_xrefs":["PMID:8292390","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"small multiseptate cell during stationary phase","termid":"FYPO:0004496"}


id: GO:0008057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye.","definition_xrefs":["PMID:9303295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment granule organization","secondary_identifiers":["GO:0008059","GO:0045318","GO:0048751"],"synonyms":[{"name":"eye pigment granule organisation","type":"exact"},{"name":"eye pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0008057"}


id: PR:Q9UTN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfs2 gene.","definition_xrefs":["UniProtKB:Q9UTN4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylation factor subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.14c","synonyms":[{"name":"Spom972h-pfs2","type":"exact"}],"termid":"PR:Q9UTN4"}


id: PBO:0039169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKAP1 divergent transcript","termid":"PBO:0039169"}


id: GO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bulbus arteriosus is generated and organized. The bulbus arteriosus is an elastic cardiac chamber.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"bulbus arteriosus development","termid":"GO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bulbus arteriosus morphogenesis","termid":"GO:0003233"}


id: PBO:0066284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member H, pseudogene","termid":"PBO:0066284"}


id: PBO:0086480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2","termid":"PBO:0086480"}


id: PBO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 4","termid":"PBO:0050629"}


id: PBO:0048522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 5","termid":"PBO:0048522"}


id: PBO:0091252
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD54","termid":"PBO:0091252"}


id: PBO:0017800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl metalloaminopeptidase Aap1","termid":"PBO:0017800"}


id: PBO:0085405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; truncation and overexpression suppresses lethality of G-alpha protein deficiency","termid":"PBO:0085405"}


id: PBO:0062613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 1","termid":"PBO:0062613"}


id: GO:0006667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine, D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["PMID:29165427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sphinganine metabolic process","synonyms":[{"name":"dihydrosphingosine metabolic process","type":"exact"},{"name":"dihydrosphingosine metabolism","type":"exact"},{"name":"sphinganine metabolism","type":"exact"}],"termid":"GO:0006667"}


id: PBO:0089208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase NADPH flavoprotein subunit","termid":"PBO:0089208"}


id: FYPO:0000428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished entry into G0","synonyms":[{"name":"G1/G0 transition abolished","type":"exact"},{"name":"cell cycle quiescence abolished","type":"related"},{"name":"entry into G0 abolished","type":"exact"},{"name":"establishment of cell quiescence abolished","type":"exact"}],"termid":"FYPO:0000428"}


id: GO:0009235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"cobalamin metabolic process","synonyms":[{"name":"cobalamin metabolism","type":"exact"},{"name":"vitamin B12 metabolic process","type":"exact"},{"name":"vitamin B12 metabolism","type":"exact"},{"name":"vitamin B12 reduction","type":"narrow"}],"termid":"GO:0009235"}


id: PBO:0073874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 2","termid":"PBO:0073874"}


id: PBO:0072641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 2',3'-cyclic phosphate and 5'-OH ligase","termid":"PBO:0072641"}


id: PBO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.16","termid":"PBO:0000610"}


id: GO:0003231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac ventricle over time, from its formation to the mature structure. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac ventricle development","termid":"GO:0003231"}


id: GO:1901511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-microperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(-)-microperfuranone metabolic process","termid":"GO:1901510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone catabolic process","synonyms":[{"name":"(-)-microperfuranone breakdown","type":"exact"},{"name":"(-)-microperfuranone catabolism","type":"exact"},{"name":"(-)-microperfuranone degradation","type":"exact"}],"termid":"GO:1901511"}


id: PBO:0044858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 1","termid":"PBO:0044858"}


id: PBO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.9","termid":"PBO:0001509"}


id: PBO:0089870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit, ubiquitin-specific protease subunit Rpn11","termid":"PBO:0089870"}


id: MOD:00892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to D-serine.","definition_xrefs":["PubMed:6893271","PubMed:18025465","RESID:AA0195#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine (Cys)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Cys)","type":"exact"}],"termid":"MOD:00892"}


id: SO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"3 prime UTR truncation","type":"exact"},{"name":"Jannovar:3_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_3_DELETED","type":"exact"}],"termid":"SO:0002015"}


id: SO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudoknots involved in recoding are unique in that, as they play their role as a structure, they are immediately unfolded and their now linear sequence serves as a template for decoding.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudoknot","termid":"SO:0000591"},{"relation_name":"part_of","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoding_pseudoknot","synonyms":[{"name":"recoding pseudoknot","type":"exact"}],"termid":"SO:0000545"}


id: GO:0021966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a neuron that is part of the corticospinal tract is directed from the cerebral cortex layer V to the spinal cord dorsal funiculus in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal tract morphogenesis","termid":"GO:0021957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance","synonyms":[{"name":"corticospinal neuron axon pathfinding","type":"exact"}],"termid":"GO:0021966"}


id: CHEBI:35176
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc sulfate","termid":"CHEBI:35176"}


id: PBO:0038313
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_name","termid":"PBO:0038313"}


id: PBO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP pseudouridylase box H/ACA snoRNP complex protein (predicted)","termid":"PBO:0001081"}


id: PBO:0005029
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.99.1.1","termid":"PBO:0005029"}


id: PBO:0111346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Sof1","termid":"PBO:0111346"}


id: PR:Q9HGL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02386","PANTHER:PTHR12945:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.08","secondary_identifiers":["UniProtKB:Q9HGL4"],"synonyms":[{"name":"Spom972h-TRMT6","type":"exact"},{"name":"general control non-derepressible protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein gcd10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1A58)-methyltransferase subunit trm6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1A58)MTase subunit trm6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGL4"}


id: FYPO:0000133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"},{"relation_name":"output_of","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"elongated multinucleate vegetative cell","synonyms":[{"name":"elongated multinucleate cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"long multinucleate vegetative cell","type":"exact"}],"termid":"FYPO:0000133"}


id: GO:0008312
data:
  {"annotated_genes":["SJAG_01282","SJAG_03684","SJAG_03411","SJAG_01840","SJAG_02456","SJAG_01759"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86991,87773,110489,111249,112051,112765],"is_not":false,"summary":null,"term":"GO:0008312"}]},"cv_name":"molecular_function","definition":"Binding to a 7S RNA, the RNA component of the signal recognition particle (SRP).","definition_xrefs":["GOC:jl","PMID:6181418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"7S RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008312","terms_by_termid":{"GO:0008312":null}}


id: GO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (RNAP II) regulatory transcription factor and also with the RNAP II basal transcription machinery in order to increase the frequency, rate or stability of the aggregation, arrangement and bonding together of proteins on RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC). Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between activating transcription factors and the basal RNAP II transcription machinery.","definition_xrefs":["GOC:txnOH","PMID:16858867"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly (obsolete GO:0001128)","synonyms":[{"name":"RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001128"}


id: GO:0006544
data:
  {"annotated_genes":["SJAG_01766","SJAG_02450","SJAG_02901","SJAG_03914","SJAG_03641","SJAG_03861","SJAG_03290","SJAG_01271"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[87449,90630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[94008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[83621,109153,92547,84863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_01766":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine metabolism","type":"exact"}],"termid":"GO:0006544","terms_by_termid":{"GO:0006545":null,"GO:0006546":null,"GO:0019264":null,"GO:0019464":null}}


id: GO:0141026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to cholesterol on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23239883","PMID:17557817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane cholesterol","termid":"GO:0141026"}


id: GO:0033549
data:
  {"annotated_genes":["SJAG_02013","SJAG_02433","SJAG_03263","SJAG_02000","SJAG_03185","SJAG_03893"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93770],"is_not":false,"summary":null,"term":"GO:0033549"},{"annotations":[113188,92122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[99936,87806,91182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[99937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate.","definition_xrefs":["PMID:12184814","PMID:17208316","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_02433":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140096","GO:0004721","GO:0016788"],"is_obsolete":false,"name":"MAP kinase phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPK phosphatase activity","type":"exact"}],"termid":"GO:0033549","terms_by_termid":{"GO:0017017":null,"GO:0033549":null,"GO:0033550":null,"GO:1990439":null}}


id: SO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated at transcription.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_regulated","synonyms":[{"name":"transcriptionally regulated","type":"exact"}],"termid":"SO:0000123"}


id: GO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase kinase kinase (JNKKK) activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JNKKK activity (obsolete GO:0042655)","synonyms":[{"name":"activation of JUN kinase kinase kinase activity","type":"exact"},{"name":"positive regulation of JUNKKK activity","type":"broad"}],"termid":"GO:0042655"}


id: PBO:0000438
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibits Cdr2 localization at non-growing cell end","termid":"PBO:0000438"}


id: GO:0046889
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"positively_regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of lipid biosynthetic process","type":"narrow"},{"name":"positive regulation of lipid anabolism","type":"exact"},{"name":"positive regulation of lipid biosynthesis","type":"exact"},{"name":"positive regulation of lipid formation","type":"exact"},{"name":"positive regulation of lipid synthesis","type":"exact"},{"name":"positive regulation of lipogenesis","type":"exact"},{"name":"stimulation of lipid biosynthetic process","type":"narrow"},{"name":"up regulation of lipid biosynthetic process","type":"exact"},{"name":"up-regulation of lipid biosynthetic process","type":"exact"},{"name":"upregulation of lipid biosynthetic process","type":"exact"}],"termid":"GO:0046889","terms_by_termid":{"GO:0070452":null}}


id: PBO:0109090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 4","termid":"PBO:0109090"}


id: GO:0019938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; occurs in mammals in proteins as yet unidentified by a mechanism probably analogous to that of transglutaminase reactions.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic (obsolete GO:0019938)","termid":"GO:0019938"}


id: PBO:0063848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 1","termid":"PBO:0063848"}


id: PBO:0053070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBH domain containing 1","termid":"PBO:0053070"}


id: GO:0047451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxyoctanoyl-[acyl-carrier protein] = H2O + (2E)-octenoyl-[acyl-carrier protein].","definition_xrefs":["RHEA:41844","PMID:8910376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04537","MetaCyc:4.2.1.59-RXN"],"synonyms":[{"name":"(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] hydro-lyase activity","type":"related"},{"name":"3-hydroxyoctanoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0047451"}


id: PBO:0003543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp10","termid":"PBO:0003543"}


id: PBO:0040693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCDIN3D antisense RNA 1","termid":"PBO:0040693"}


id: GO:0060967
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene silencing by regulatory ncRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of gene silencing by RNA","type":"related"},{"name":"negative regulation of gene silencing by ncRNA","type":"related"}],"termid":"GO:0060967","terms_by_termid":{"GO:0060906":null}}


id: PBO:0041520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf46 divergent transcript","termid":"PBO:0041520"}


id: PBO:0011998
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible non-coding RNA","termid":"PBO:0011998"}


id: SO:0001372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methyluridine","secondary_identifiers":["RNAMOD:085"],"synonyms":[{"name":"3-methyluridine","type":"exact"},{"name":"m3U","type":"exact"},{"name":"three methyluridine","type":"exact"}],"termid":"SO:0001372"}


id: FYPO:0005665
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"},{"relation_name":"output_of","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_04522"],"name":"abnormal actin cytoskeleton","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703","SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","for3delta","pom1delta"],"synonyms":[{"name":"abnormal actin cytoskeleton physical object quality","type":"exact"}],"termid":"FYPO:0005665","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-O","termid":"PBO:0090185"}


id: PBO:0049046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37","termid":"PBO:0049046"}


id: GO:0034235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"GPI anchor binding","synonyms":[{"name":"glycosylphosphatidylinositol binding","type":"exact"}],"termid":"GO:0034235"}


id: PATO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as food.","definition_xrefs":["PATOC:VO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edibility","termid":"PATO:0002138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inedible","termid":"PATO:0002140"}


id: PBO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 regulator Dap1","termid":"PBO:0002392"}


id: GO:1990269
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71519,76931],"is_not":false,"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to phosphorylated serine residues in the C-terminal domain of RNA polymerase II.","definition_xrefs":["GOC:di","PMID:22796944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoserine residue binding","termid":"GO:0050815"},{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain binding","termid":"GO:0099122"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain phosphoserine binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA Pol II C-terminal domain phosphoserine binding","type":"exact"},{"name":"RNAP II C-terminal domain phosphoserine binding","type":"exact"}],"termid":"GO:1990269","terms_by_termid":{"GO:1990269":null}}


id: PBO:0058563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6505","termid":"PBO:0058563"}


id: GO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:22022213","GOC:pm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty acid import into cell","synonyms":[{"name":"long-chain fatty acid import","type":"related"},{"name":"long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0044539"}


id: FYPO:0002830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during vegetative growth","synonyms":[{"name":"delayed onset of protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein/peptide phosphorylation during vegetative growth","type":"exact"},{"name":"delayed protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002830"}


id: GO:2000891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellobiose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellobiose metabolic process","synonyms":[{"name":"cellobiose metabolism","type":"exact"}],"termid":"GO:2000891"}


id: GO:1904000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eating behavior.","definition_xrefs":["GOC:TermGenie","PMID:11961051","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"is_a","term_name":"positive regulation of feeding behavior","termid":"GO:2000253"},{"relation_name":"positively_regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eating behavior","synonyms":[{"name":"activation of eating behavior","type":"narrow"},{"name":"activation of eating behaviour","type":"narrow"},{"name":"positive regulation of eating behaviour","type":"exact"},{"name":"up regulation of eating behavior","type":"exact"},{"name":"up regulation of eating behaviour","type":"exact"},{"name":"up-regulation of eating behavior","type":"exact"},{"name":"up-regulation of eating behaviour","type":"exact"},{"name":"upregulation of eating behavior","type":"exact"},{"name":"upregulation of eating behaviour","type":"exact"}],"termid":"GO:1904000"}


id: GO:1904827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GOC:BHF","PMID:22034194","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of hydrogen sulfide biosynthetic process","termid":"GO:1904826"},{"relation_name":"negatively_regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"down regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down regulation of hydrogen sulfide formation","type":"exact"},{"name":"down regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide formation","type":"exact"},{"name":"down-regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide anabolism","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide formation","type":"exact"},{"name":"downregulation of hydrogen sulfide synthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"inhibition of hydrogen sulfide anabolism","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthetic process","type":"narrow"},{"name":"inhibition of hydrogen sulfide formation","type":"narrow"},{"name":"inhibition of hydrogen sulfide synthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthetic process","type":"narrow"},{"name":"negative regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"negative regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulfide formation","type":"exact"},{"name":"negative regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904827"}


id: PBO:0063556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plaque enriched lncRNA in atherosclerotic and inflammatory bowel macrophage regulation","termid":"PBO:0063556"}


id: PBO:0090569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Cgi121","termid":"PBO:0090569"}


id: FYPO:0007827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring organization is normal (i.e. indistinguishable from wild type). The process results in the assembly, arrangement of constituent parts, or disassembly of the actomyosin contractile ring.","definition_xrefs":["GO:0044837","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring organization","synonyms":[{"name":"normal actomyosin contractile ring organisation","type":"exact"},{"name":"normal actomyosin contractile ring organization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring organization during vegetative growth","type":"exact"},{"name":"normal contractile ring organization","type":"exact"}],"termid":"FYPO:0007827"}


id: PBO:0077995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha constant","termid":"PBO:0077995"}


id: FYPO:0003577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transport of a substance from the plasma membrane to the vacuole does not occur when the cell is subject to, or recovering from, nitrogen starvation. Transport normally occurs in two stages, plasma membrane to endosome followed by endosome to vacuole transport.","definition_xrefs":["PomBase:mah","PMID:22194353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport","termid":"FYPO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished plasma membrane to vacuole transport after nitrogen starvation","synonyms":[{"name":"abolished plasma membrane to vacuole protein transport after nitrogen starvation","type":"narrow"}],"termid":"FYPO:0003577"}


id: GO:1900663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of emericellamide biosynthetic process","termid":"GO:1900660"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"positively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of emericellamide A biosynthetic process","synonyms":[{"name":"activation of emericellamide A anabolism","type":"exact"},{"name":"activation of emericellamide A biosynthesis","type":"exact"},{"name":"activation of emericellamide A biosynthetic process","type":"narrow"},{"name":"activation of emericellamide A formation","type":"exact"},{"name":"activation of emericellamide A synthesis","type":"exact"},{"name":"positive regulation of emericellamide A anabolism","type":"exact"},{"name":"positive regulation of emericellamide A biosynthesis","type":"exact"},{"name":"positive regulation of emericellamide A formation","type":"exact"},{"name":"positive regulation of emericellamide A synthesis","type":"exact"},{"name":"up regulation of emericellamide A anabolism","type":"exact"},{"name":"up regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up regulation of emericellamide A formation","type":"exact"},{"name":"up regulation of emericellamide A synthesis","type":"exact"},{"name":"up-regulation of emericellamide A anabolism","type":"exact"},{"name":"up-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up-regulation of emericellamide A formation","type":"exact"},{"name":"up-regulation of emericellamide A synthesis","type":"exact"},{"name":"upregulation of emericellamide A anabolism","type":"exact"},{"name":"upregulation of emericellamide A biosynthesis","type":"exact"},{"name":"upregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"upregulation of emericellamide A formation","type":"exact"},{"name":"upregulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900663"}


id: PBO:0035958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035958"}


id: FYPO:0003435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"increased ornithine carbamoyltransferase activity","termid":"FYPO:0003435"}


id: PBO:0034071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apparent_orthology_relationship_with","termid":"PBO:0034071"}


id: GO:0018871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["UM-BBD_pathwayID:acp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate metabolic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate metabolism","type":"exact"},{"name":"ACP metabolic process","type":"exact"},{"name":"ACP metabolism","type":"exact"}],"termid":"GO:0018871"}


id: GO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin + O2 = 2 biliverdin + 2 H2O.","definition_xrefs":["EC:1.3.3.5","RHEA:20980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"bilirubin oxidase activity","secondary_identifiers":["KEGG_REACTION:R02394","MetaCyc:BILIRUBIN-OXIDASE-RXN"],"synonyms":[{"name":"bilirubin oxidase M-1","type":"related"},{"name":"bilirubin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047705"}


id: GO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein serine/threonine phosphatase activity (obsolete GO:0039517)","synonyms":[{"name":"modulation by virus of protein serine/threonine phosphatase activity in host","type":"exact"},{"name":"regulation by virus of host protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0039517"}


id: PBO:0031460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cadmium","termid":"PBO:0031460"}


id: GO:0120337
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the radial spoke 2 that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary axoneme.","definition_xrefs":["GOC:krc","PMID:22754630","PMID:348711799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke head","termid":"GO:0001535"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke head 2","synonyms":[{"name":"radial spokehead 2","type":"exact"}],"termid":"GO:0120337"}


id: FYPO:0003980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}


id: GO:0043400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of cortisol, a steroid hormone that in humans is the major circulating hormone of the cortex, or outer layer, of the adrenal gland.","definition_xrefs":["PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cortisol secretion","synonyms":[{"name":"hydrocortisone secretion","type":"exact"}],"termid":"GO:0043400"}


id: PBO:0059235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L9","termid":"PBO:0059235"}


id: PATO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000206 enzyme function (obsolete PATO:0000206)","termid":"PATO:0000206"}


id: SO:0001617
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant of the CD that causes a truncation of the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_truncation","synonyms":[{"name":"polypeptide truncation","type":"exact"}],"termid":"SO:0001617"}


id: GO:0043388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"},{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA binding","synonyms":[{"name":"activation of DNA binding","type":"narrow"},{"name":"stimulation of DNA binding","type":"narrow"},{"name":"up regulation of DNA binding","type":"exact"},{"name":"up-regulation of DNA binding","type":"exact"},{"name":"upregulation of DNA binding","type":"exact"}],"termid":"GO:0043388"}


id: GO:1902927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inulin.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:23104410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan catabolic process","termid":"GO:0010147"},{"relation_name":"is_a","term_name":"inulin metabolic process","termid":"GO:1902926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"inulin catabolic process","synonyms":[{"name":"inulin breakdown","type":"exact"},{"name":"inulin catabolism","type":"exact"},{"name":"inulin degradation","type":"exact"}],"termid":"GO:1902927"}


id: GO:0099174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a presynapse.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynapse organization","synonyms":[{"name":"regulation of presynapse organisation","type":"exact"},{"name":"regulation of presynapse organization and biogenesis","type":"related"},{"name":"regulation of presynapse structure","type":"exact"}],"termid":"GO:0099174"}


id: PBO:0087273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3C histone deacetylase scaffold; can act as prion [ESI+] (Expressed Subtelomeric Information) that drives emergence and transgenerational inheritance of activated chromatin state; prion conformer is triggered by transient Snt1p phosphorylation upon cell cycle arrest; [ESI+] reshapes the activity Set3C, recruiting RNAPII, interfering with Rap1p binding to activate genes in otherwise repressed subtelomeric domains; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087273"}


id: PBO:0065868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB25, member RAS oncogene family","termid":"PBO:0065868"}


id: PR:P78870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.07c","synonyms":[{"name":"FALDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd1","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78870"}


id: GO:0043082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a plant egg cell. This nucleus is found at the micropylar end of the embryo.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"megagametophyte egg cell nucleus","termid":"GO:0043082"}


id: PBO:0086526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YCR025C is not an essential gene","termid":"PBO:0086526"}


id: GO:0075285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of multicellular or syncytial spore via septations derived from meiosis. A multicellular or syncytial spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation","termid":"GO:0034293"},{"relation_name":"is_a","term_name":"sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sexual sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075285"}


id: FYPO:0008010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA-dependent RNA polymerase activity is decreased.","definition_xrefs":["PMID:15615848","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA-dependent RNA polymerase","termid":"FYPO:0008010"}


id: PBO:0081551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF470 divergent transcript","termid":"PBO:0081551"}


id: PBO:0090170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf12","termid":"PBO:0090170"}


id: SO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of an edited transcript that will not be edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unedited_region","synonyms":[{"name":"unedited region","type":"exact"}],"termid":"SO:0000607"}


id: GO:0098876
data:
  {"annotated_genes":["SJAG_02912","SJAG_01945","SJAG_00379","SJAG_00330","SJAG_01809","SJAG_00669","SJAG_02231","SJAG_02177","SJAG_03864","SJAG_02811","SJAG_04358","SJAG_02320","SJAG_03970","SJAG_00314","SJAG_01516","SJAG_03756","SJAG_02240","SJAG_00826","SJAG_00916","SJAG_02753","SJAG_03838","SJAG_04565","SJAG_00144","SJAG_03250","SJAG_04846","SJAG_04044","SJAG_04609","SJAG_00858","SJAG_03938","SJAG_00430","SJAG_01335","SJAG_03754","SJAG_02166","SJAG_01114","SJAG_03357","SJAG_01135","SJAG_04509","SJAG_01382"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100939,105297,72122,95826,96316,111836,108616,108580,111757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032456"},{"annotations":[88426,108906,109129,114586,114964,97256,103487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[94849,105708,109131,103161,91292,87320,103265,102521,104917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[95677,84816,95887,88414,86913,96973,109993,111759,113819,102402,114917,103506,96035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006893"},{"annotations":[84283],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[84090],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"The directed movement of substances to the plasma membrane in transport vesicles that fuse with the plasma membrane by exocytosis.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00314":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00430":null,"SJAG_00669":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01135":null,"SJAG_01335":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02240":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03357":null,"SJAG_03754":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle-mediated transport to the plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098876","terms_by_termid":{"GO:0006893":null,"GO:0032456":null,"GO:0042997":null,"GO:0043001":null,"GO:0099638":null,"GO:2001135":null}}


id: GO:0033944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-galactofuranosides, releasing galactose.","definition_xrefs":["EC:3.2.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-galactofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.146-RXN"],"synonyms":[{"name":"beta-D-galactofuranosidase activity","type":"related"},{"name":"beta-D-galactofuranoside hydrolase activity","type":"related"},{"name":"exo-beta-D-galactofuranosidase activity","type":"related"},{"name":"exo-beta-galactofuranosidase activity","type":"related"}],"termid":"GO:0033944"}


id: GO:0046354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"mannan biosynthetic process","synonyms":[{"name":"mannan anabolism","type":"exact"},{"name":"mannan biosynthesis","type":"exact"},{"name":"mannan formation","type":"exact"},{"name":"mannan synthesis","type":"exact"}],"termid":"GO:0046354"}


