# terms

id: PBO:0064654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 4","termid":"PBO:0064654"}


id: GO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammeline + H2O = N-cyclopropylammelide + NH3.","definition_xrefs":["UM-BBD_reactionID:r0826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"N-cyclopropylammeline deaminase activity","secondary_identifiers":["MetaCyc:RXN-8019"],"termid":"GO:0034548"}


id: _global:assayed_using
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and an entity, such as a gene product that acts as an enzyme or substrate, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_using","termid":"_global:assayed_using"}


id: GO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil activation involved in immune response","synonyms":[{"name":"neutrophil activation during immune response","type":"related"}],"termid":"GO:0002283"}


id: PBO:0053134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 1","termid":"PBO:0053134"}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: PBO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-W","termid":"PBO:0002626"}


id: GO:0036349
data:
  {"annotated_genes":["SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99684],"is_not":false,"summary":null,"term":"GO:0036349"}]},"cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["PMID:22098069","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"galactose-specific flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098611"],"synonyms":[{"name":"cell-cell adhesion involved in galactose-specific flocculation","type":"exact"}],"termid":"GO:0036349","terms_by_termid":{"GO:0036349":null}}


id: PBO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 6","termid":"PBO:0046552"}


id: PBO:0028149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2/U5/U6_snRNP_complex_level","termid":"PBO:0028149"}


id: GO:0160065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:22525225","PMID:21131906","PMID:22684255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"SIN/MEN signaling complex","synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065"}


id: PBO:0068187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 494","termid":"PBO:0068187"}


id: FYPO:0000037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize cysteine, and therefore requires cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for sulfur-containing amino acid","termid":"FYPO:0003355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for cysteine","synonyms":[{"name":"cysteine auxotrophy","type":"exact"},{"name":"growth auxotrophic for cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0000037"}


id: PBO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 like","termid":"PBO:0070744"}


id: PBO:0044984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX35 divergent transcript","termid":"PBO:0044984"}


id: GO:0034076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = cucurbitadienol.","definition_xrefs":["GOC:cb","PMID:18033581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"cucurbitadienol synthase activity","termid":"GO:0034076"}


id: FYPO:0000228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sister chromatids do not move towards the spindle poles at the same time during mitosis, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Mitotic sister chromatid segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PMID:11809834","PomBase:mah","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"lagging chromosomes","termid":"FYPO:0002090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"lagging mitotic chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging mitotic chromosomes","type":"exact"},{"name":"lagging chromosomes during mitotic cell cycle","type":"related"},{"name":"lagging chromosomes during vegetative growth","type":"exact"},{"name":"lagging mitotic sister chromatids","type":"exact"}],"termid":"FYPO:0000228"}


id: GO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the spem nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyosome formation","termid":"GO:0061988"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sperm karyosome formation","termid":"GO:0061989"}


id: GO:2000144
data:
  {"annotated_genes":["SJAG_04647","SJAG_00342","SJAG_01952","SJAG_05341","SJAG_00766","SJAG_04820","SJAG_05203","SJAG_01771","SJAG_03421","SJAG_00904","SJAG_03573","SJAG_02391","SJAG_03622","SJAG_00909","SJAG_02849","SJAG_02494","SJAG_01403","SJAG_03590","SJAG_00297","SJAG_02551","SJAG_04705","SJAG_04099","SJAG_03061","SJAG_00150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85882,111306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[115012,101802,99810,102347,92009,95158,104844,99548,94813,98084,102154,86537,102479,104871,110850,91528,90595,111415,86847,90484,83645,105159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-templated transcription initiation.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"positive regulation of DNA-templated transcription initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA-dependent transcription, initiation","type":"exact"},{"name":"positive regulation of DNA-templated transcription, initiation","type":"exact"},{"name":"positive regulation of initiation of DNA-dependent transcription","type":"exact"},{"name":"positive regulation of transcription initiation, DNA-dependent","type":"exact"},{"name":"transactivation","type":"related"},{"name":"transcriptional transactivation","type":"related"}],"termid":"GO:2000144","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: PBO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030916"}


id: GO:0046630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation","synonyms":[{"name":"gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"gamma-delta T-cell proliferation","type":"exact"},{"name":"gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046630"}


id: PBO:0005880
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic ORF","termid":"PBO:0005880"}


id: PBO:0024814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_regulating","termid":"PBO:0024814"}


id: GO:0045833
data:
  {"annotated_genes":["SJAG_03130","SJAG_01906","SJAG_02380","SJAG_03940","SJAG_02104","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[107381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[111592,107491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[108866,105855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"negatively_regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01906":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of lipid metabolic process","type":"exact"},{"name":"down-regulation of lipid metabolic process","type":"exact"},{"name":"downregulation of lipid metabolic process","type":"exact"},{"name":"inhibition of lipid metabolic process","type":"narrow"},{"name":"negative regulation of lipid metabolism","type":"exact"}],"termid":"GO:0045833","terms_by_termid":{"GO:0010895":null,"GO:0045717":null,"GO:0071072":null,"GO:2001211":null}}


id: FYPO:0005415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the first meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis I","termid":"FYPO:0005413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during meiotic anaphase I","synonyms":[{"name":"increased protein accumulation during meiotic anaphase I","type":"related"},{"name":"increased protein level during first meiotic anaphase","type":"exact"}],"termid":"FYPO:0005415"}


id: FYPO:0003872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased glutathione level during G0","synonyms":[{"name":"increased glutathione accumulation during G0","type":"related"},{"name":"increased glutathione level during cell quiescence","type":"exact"},{"name":"increased glutathione level during quiescence","type":"exact"}],"termid":"FYPO:0003872"}


id: PBO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_unknown","termid":"PBO:0034695"}


id: PR:O94267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SPT16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit spt16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.19","secondary_identifiers":["UniProtKB:O94267"],"synonyms":[{"name":"Spom972h-SUPT16H","type":"exact"},{"name":"facilitates chromatin transcription complex subunit spt16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94267"}


id: GO:0033454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GCC codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033454"}


id: GO:0046290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid catabolic process","termid":"GO:0046288"},{"relation_name":"is_a","term_name":"isoflavonoid phytoalexin metabolic process","termid":"GO:0046289"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"isoflavonoid phytoalexin catabolic process","synonyms":[{"name":"isoflavonoid phytoalexin breakdown","type":"exact"},{"name":"isoflavonoid phytoalexin catabolism","type":"exact"},{"name":"isoflavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046290"}


id: PBO:0038636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 1","termid":"PBO:0038636"}


id: PBO:0055166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2587","termid":"PBO:0055166"}


id: SO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation where it decreases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated","synonyms":[{"name":"negatively autoregulated","type":"exact"}],"termid":"SO:0000473"}


id: GO:0008663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 3'-phosphate.","definition_xrefs":["EC:3.1.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 2'-phosphodiesterase activity","secondary_identifiers":["MetaCyc:CYCPHOSDIESTER-RXN","RHEA:19621"],"synonyms":[{"name":"2',3 '-cyclic AMP phosphodiesterase activity","type":"related"},{"name":"2',3'-cyclic AMP 2'-phosphohydrolase activity","type":"related"},{"name":"2',3'-cyclic nucleoside monophosphate phosphodiesterase","type":"broad"},{"name":"2',3'-cyclic nucleotidase activity","type":"related"},{"name":"2',3'-cyclic nucleotide phosphohydrolase","type":"broad"},{"name":"2':3'-cyclic nucleotide phosphodiesterase:3'-nucleotidase activity","type":"related"},{"name":"2':3'-cyclic phosphodiesterase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide 2'-phosphodiesterase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide phosphodiesterase","type":"broad"},{"name":"cyclic phosphodiesterase:3'-nucleotidase activity","type":"related"},{"name":"nucleoside-2',3'-cyclic-phosphate 3'-nucleotidohydrolase activity","type":"related"},{"name":"ribonucleoside 2',3'-cyclic phosphate diesterase activity","type":"related"}],"termid":"GO:0008663"}


id: PBO:0054645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2050","termid":"PBO:0054645"}


id: GO:2000885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a galactoglucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"galactoglucomannan metabolic process","termid":"GO:0010392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactoglucomannan catabolic process","synonyms":[{"name":"galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000885"}


id: PBO:0028620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_binding","termid":"PBO:0028620"}


id: PBO:0039823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARFGEF family member 3","termid":"PBO:0039823"}


id: PBO:0077315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 2","termid":"PBO:0077315"}


id: PBO:0060298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 7","termid":"PBO:0060298"}


id: GO:0008869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactonate = 2-dehydro-3-deoxy-D-galactonate + H2O.","definition_xrefs":["EC:4.2.1.6","RHEA:18649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"galactonate dehydratase activity","secondary_identifiers":["MetaCyc:GALACTONDEHYDRAT-RXN","KEGG_REACTION:R03033"],"synonyms":[{"name":"D-galactonate dehydrase activity","type":"related"},{"name":"D-galactonate dehydratase activity","type":"related"},{"name":"D-galactonate hydro-lyase (2-dehydro-3-deoxy-D-galactonate-forming)","type":"related"},{"name":"D-galactonate hydro-lyase activity","type":"related"}],"termid":"GO:0008869"}


id: PBO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Gnr1","termid":"PBO:0005272"}


id: GO:0099564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission via modification of the structure of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"modification of synaptic structure, modulating synaptic transmission","termid":"GO:0099564"}


id: PBO:0062575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 4 pseudogene","termid":"PBO:0062575"}


id: PBO:0087064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L31A; associates with karyopherin Sxm1p; loss of both Rpl31p and Rpl39p confers lethality; homologous to mammalian ribosomal protein L31, no bacterial homolog; RPL31A has a paralog, RPL31B, that arose from the whole genome duplication","termid":"PBO:0087064"}


id: PBO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 5","termid":"PBO:0044654"}


id: FYPO:0004807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell is narrower than normal at the point where cell fusion occurred during mating. Normally, the cell expands at the fusion site after fusion takes place.","definition_xrefs":["PomBase:mah","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"narrow cell fusion site following mating","synonyms":[{"name":"narrow cell fusion site following conjugation","type":"exact"},{"name":"narrow cell fusion site following conjugation with cellular fusion","type":"exact"},{"name":"narrow cell-cell fusion site following conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004807"}


id: MOD:01936
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-oleoyl-L-lysine.","definition_xrefs":["RESID:AA0590","PubMed:20942504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-oleoylated residue","termid":"MOD:02011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-oleoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(9Z)-octadec-9-enoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-[(9Z)-1-oxo-9-octadecenyl]lysine","type":"exact"},{"name":"N6-oleoyl-L-lysine","type":"exact"}],"termid":"MOD:01936"}


id: PBO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A1","termid":"PBO:0039709"}


id: PBO:0057774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2277","termid":"PBO:0057774"}


id: GO:1901831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving all-trans-neoxanthin.","definition_xrefs":["MetaCyc:PWY-6809","PMID:11029576","UniPathway:UPA00388","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"all-trans-neoxanthin metabolic process","synonyms":[{"name":"all-trans-neoxanthin metabolism","type":"exact"},{"name":"neoxanthin metabolic process","type":"exact"},{"name":"neoxanthin metabolism","type":"exact"}],"termid":"GO:1901831"}


id: FYPO:0003350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PomBase:mah","GO:0000092","GO:1902967","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"abolished protein localization to spindle midzone during mitotic anaphase B","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase B","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase B","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase B","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase B during vegetative growth","type":"exact"}],"termid":"FYPO:0003350"}


id: GO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"}


id: GO:0102381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: stevioside + UDP-alpha-D-glucose = rebaudioside A + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"stevioside glucosyltransferase activity (rebaudioside A forming)","secondary_identifiers":["MetaCyc:RXN-13517"],"termid":"GO:0102381"}


id: GO:2001026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"}


id: FYPO:0005261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth on galactose carbon source","synonyms":[{"name":"increased growth on galactose carbon source","type":"broad"},{"name":"increased vegetative cell growth on galactose carbon source","type":"exact"}],"termid":"FYPO:0005261"}


id: GO:0009148
data:
  {"annotated_genes":["SJAG_05024","SJAG_00412","SJAG_00533","SJAG_00964","SJAG_04657","SJAG_04665","SJAG_02887","SJAG_00885","SJAG_04627","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89101,111033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[85554,88578,114111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[103382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[96200,89559,102632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate metabolic process","termid":"GO:0009147"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00533":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine nucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009148","terms_by_termid":{"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0044210":null,"GO:0044211":null}}


id: PBO:0078641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component interacting RNase","termid":"PBO:0078641"}


id: PBO:0038792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 2","termid":"PBO:0038792"}


id: PBO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-7 (non-functional)","termid":"PBO:0051360"}


id: GO:0046429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + H2O + 2 oxidized ferredoxin = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate + 2 reduced ferredoxin.","definition_xrefs":["EC:1.17.7.1","PMID:11752431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)","secondary_identifiers":["RHEA:26119","MetaCyc:RXN0-882","KEGG_REACTION:R08689"],"synonyms":[{"name":"(E)-4-hydroxy-3-methylbut-2-en-1-yl-diphosphate:oxidized ferredoxin oxidoreductase activity","type":"exact"},{"name":"(E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase activity","type":"broad"},{"name":"1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase activity","type":"broad"},{"name":"1-hydroxy-2-methyl-2-butenyl 4-diphosphate synthase activity","type":"broad"}],"termid":"GO:0046429"}


id: RO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in catabolism of c if and only if p is a catabolic process, and the execution of p results in c being broken into smaller parts with energy being released.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_breakdown_of","termid":"RO:0002586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_catabolism_of","termid":"RO:0002589"}


id: PBO:0062577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 1 pseudogene","termid":"PBO:0062577"}


id: GO:1903072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of death-inducing signaling complex assembly.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","PMID:21785459","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"death-inducing signaling complex assembly","termid":"GO:0071550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of death-inducing signaling complex assembly","synonyms":[{"name":"regulation of DD-mediated complex assembly","type":"exact"},{"name":"regulation of DISC assembly","type":"exact"},{"name":"regulation of DISC formation","type":"exact"},{"name":"regulation of death domain-mediated complex assembly","type":"exact"},{"name":"regulation of death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"regulation of death-inducing signaling complex formation","type":"exact"},{"name":"regulation of death-inducing signalling complex assembly","type":"exact"}],"termid":"GO:1903072"}


id: GO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis","synonyms":[{"name":"activation of receptor mediated endocytosis","type":"narrow"},{"name":"positive regulation of receptor mediated endocytosis","type":"exact"},{"name":"stimulation of receptor mediated endocytosis","type":"narrow"},{"name":"up regulation of receptor mediated endocytosis","type":"exact"},{"name":"up-regulation of receptor mediated endocytosis","type":"exact"},{"name":"upregulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048260"}


id: PBO:0047358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXL12 pseudogene 1","termid":"PBO:0047358"}


id: PBO:0086183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs; required for the thiolation of uridine at the wobble position of Gln, Lys, and Glu tRNAs; has a role in urmylation and in invasive and pseudohyphal growth; inhibits replication of Brome mosaic virus in S. cerevisiae","termid":"PBO:0086183"}


id: GO:0005294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a neutral L-amino acid from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"neutral L-amino acid secondary active transmembrane transporter activity","synonyms":[{"name":"neutral L-amino acid porter activity","type":"related"}],"termid":"GO:0005294"}


id: PBO:0070483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 18","termid":"PBO:0070483"}


id: GO:0098027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external contractile envelope of the tail of some viruses. Its contraction ensures ejection of the virus DNA into the host cytoplasm.","definition_xrefs":["GOC:bm","VZ:3959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, sheath","synonyms":[{"name":"bacteriophage tail sheath","type":"narrow"}],"termid":"GO:0098027"}


id: PBO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsr1","termid":"PBO:0090120"}


id: GO:0097353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the areas along the centrolateral axis are established that will lead to differences in cell differentiation, or in which cells interpret a specific environment.","definition_xrefs":["GOC:dsz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centrolateral pattern formation","synonyms":[{"name":"mediolateral pattern formation","type":"exact"}],"termid":"GO:0097353"}


id: PBO:0084495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Sae3p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084495"}


id: PBO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)/GCN5-related N acetyltransferase fusion protein","termid":"PBO:0004324"}


id: GO:1901740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast fusion.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:21364645","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of syncytium formation by plasma membrane fusion","termid":"GO:0034242"},{"relation_name":"is_a","term_name":"regulation of myoblast fusion","termid":"GO:1901739"},{"relation_name":"negatively_regulates","term_name":"myoblast fusion","termid":"GO:0007520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast fusion","synonyms":[{"name":"down regulation of myoblast fusion","type":"exact"},{"name":"down-regulation of myoblast fusion","type":"exact"},{"name":"downregulation of myoblast fusion","type":"exact"},{"name":"inhibition of myoblast fusion","type":"narrow"}],"termid":"GO:1901740"}


id: PBO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 7","termid":"PBO:0045883"}


id: GO:0021674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 8 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 8 development","termid":"GO:0021574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}


id: PBO:0045239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 7","termid":"PBO:0045239"}


id: GO:0010623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of endogenous cellular processes that result in the death of a cell as part of its development.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death involved in cell development","synonyms":[{"name":"developmental programmed cell death","type":"broad"},{"name":"programmed cell death involved in development","type":"broad"}],"termid":"GO:0010623"}


id: GO:0032181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a dinucleotide repeat insertion or a deletion resulting in unpaired dinucleotide repeats.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide insertion or deletion binding","termid":"GO:0032139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"dinucleotide repeat insertion binding","termid":"GO:0032181"}


id: PBO:0074497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP25 antisense RNA 1","termid":"PBO:0074497"}


id: PR:Q9USL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18B5.09c gene.","definition_xrefs":["UniProtKB:Q9USL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.09c","synonyms":[{"name":"Spom972h-SPCC18B5.09c","type":"exact"}],"termid":"PR:Q9USL2"}


id: GO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bacterial-type RNA polymerase core enzyme, typically consisting of two alpha, one beta, one beta prime, and one omega subunit.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"bacterial-type RNA polymerase core enzyme binding","synonyms":[{"name":"eubacterial-type RNA polymerase core enzyme binding","type":"exact"}],"termid":"GO:0001000"}


id: PBO:0058765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6889","termid":"PBO:0058765"}


id: PBO:0083336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the telomere on the right arm of chromosome 13","termid":"PBO:0083336"}


id: PR:Q9UT18
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter thi9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.10","synonyms":[{"name":"Spom972h-thi9","type":"exact"}],"termid":"PR:Q9UT18"}


id: PBO:0017575
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hmg protein counteracting Adriamycin in Pombe","termid":"PBO:0017575"}


id: PBO:0052985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3 pseudogene 1","termid":"PBO:0052985"}


id: GO:0007527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult somatic muscle development","termid":"GO:0007527"}


id: PBO:0058307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4680","termid":"PBO:0058307"}


id: GO:0030617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that inhibits the signaling function of common-partner and pathway-specific mediators.","definition_xrefs":["PMID:9759503"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity (obsolete GO:0030617)","synonyms":[{"name":"TGF-beta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"inhibitory SMAD protein","type":"related"}],"termid":"GO:0030617"}


id: PBO:0066664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 1","termid":"PBO:0066664"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103336],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016874","GO:0140101","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380224","RHEA:20301","MetaCyc:ARGININE--TRNA-LIGASE-RXN","Reactome:R-HSA-379993"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: GO:1900536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose homeostasis (obsolete GO:1900536)","synonyms":[{"name":"regulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900536"}


id: PBO:0088924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf12","termid":"PBO:0088924"}


id: PBO:0030400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_import","termid":"PBO:0030400"}


id: GO:0007533
data:
  {"annotated_genes":["SJAG_03997","SJAG_01076","SJAG_01495","SJAG_02079","SJAG_02828","SJAG_03221","SJAG_05239","SJAG_03097","SJAG_02724","SJAG_02401","SJAG_01410","SJAG_00073","SJAG_02460","SJAG_02556","SJAG_02226","SJAG_01419","SJAG_01465","SJAG_01601","SJAG_00247","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92319,92795,95193,95257,106424,106945,114845],"is_not":false,"summary":null,"term":"GO:0007533"},{"annotations":[84123],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[102178,96704,93572,92318,106944,111139,85467,112918,85343,102748,114844,106423,84124,95255,104633],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[99355,90223,104634],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[89491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"The conversion of a single-cell organism from one mating type to another by the precise replacement of a DNA sequence at the expressed mating type locus with a copy of a sequence from a donor locus.","definition_xrefs":["PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type determination","termid":"GO:0007531"},{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_01076":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type switching","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating type switching and recombination","type":"related"}],"termid":"GO:0007533","terms_by_termid":{"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: PBO:0055764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA TGF-beta/SMAD3 pathway interacting","termid":"PBO:0055764"}


id: GO:2000316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 type immune response","synonyms":[{"name":"regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000316"}


id: GO:1903842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite ion stimulus.","definition_xrefs":["PMID:12106899","GO_REF:0000071","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenite ion","termid":"GO:1903842"}


id: PBO:0039498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A21, pseudogene","termid":"PBO:0039498"}


id: GO:0140885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type III interferon-mediated signaling in the host organism. Type III interferon is also known as interferon-lambda.","definition_xrefs":["PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type III interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type III interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type III interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140885"}


id: PBO:0049303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 4","termid":"PBO:0049303"}


id: PATO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"decreased rate","termid":"PATO:0000911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased frequency","synonyms":[{"name":"infrequent","type":"related"},{"name":"low frequency","type":"exact"}],"termid":"PATO:0000381"}


id: PBO:0073981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 2","termid":"PBO:0073981"}


id: PBO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLucoSidase","termid":"PBO:0001186"}


id: PBO:0085449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to bacterial Hsp31 and yeast Hsp31p, Hsp32p, and Hsp33p; DJ-1/ThiJ/PfpI superfamily member; predicted involvement in pyridoxine metabolism; induced by mild heat stress and copper deprivation","termid":"PBO:0085449"}


id: PR:Q10292
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mek1 gene.","definition_xrefs":["UniProtKB:Q10292","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific serine/threonine-protein kinase mek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.03","synonyms":[{"name":"Spom972h-mek1","type":"exact"}],"termid":"PR:Q10292"}


id: PBO:0027042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_allyl_alcohol","termid":"PBO:0027042"}


id: PBO:0079891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase homolog","termid":"PBO:0079891"}


id: PBO:0044294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 4","termid":"PBO:0044294"}


id: PBO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 15","termid":"PBO:0062116"}


id: PBO:0027154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glycine_level","termid":"PBO:0027154"}


id: PBO:0055386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2816","termid":"PBO:0055386"}


id: PBO:0083843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exomer-dependent cargo protein; induces appearance of [PIN+] prion when overproduced; prion-like domain serves as a retention signal in the trans-Golgi network; predicted to be palmitoylated","termid":"PBO:0083843"}


id: FYPO:0005473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal glutamate synthase (NADH) activity","synonyms":[{"name":"normal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"normal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"normal NADH: GOGAT activity","type":"related"},{"name":"normal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005473"}


id: GO:2001281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell chemotaxis toward tendon cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"muscle cell chemotaxis toward tendon cell","termid":"GO:0036061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"regulation of muscle cell attraction","type":"related"},{"name":"regulation of muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:2001281"}


id: GO:0043751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (polyphosphate)n + AMP = (polyphosphate)n-1 + ADP.","definition_xrefs":["PMID:11237733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"polyphosphate:AMP phosphotransferase activity","synonyms":[{"name":"PAP","type":"exact"},{"name":"PPT","type":"broad"}],"termid":"GO:0043751"}


id: PBO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0036357"}


id: PBO:0041729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMK2G antisense RNA 1","termid":"PBO:0041729"}


id: GO:2000218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070785"},{"relation_name":"is_a","term_name":"regulation of invasive growth in response to glucose limitation","termid":"GO:2000217"},{"relation_name":"negatively_regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"negative regulation of colony morphology","type":"related"}],"termid":"GO:2000218"}


id: GO:1902702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to propan-2-ol.","definition_xrefs":["GO_REF:0000093","GOC:mengo_curators","PMID:18727018","PMID:19539744","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to propan-2-ol (obsolete GO:1902702)","synonyms":[{"name":"hexose breakdown to propan-2-ol","type":"exact"},{"name":"hexose catabolic process to isopropanol","type":"exact"},{"name":"hexose catabolic process to isopropyl alcohol","type":"exact"},{"name":"hexose catabolism to propan-2-ol","type":"exact"},{"name":"hexose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"related"}],"termid":"GO:1902702"}


id: GO:0000275
data:
  {"annotated_genes":["SJAG_02564","SJAG_00915","SJAG_03114","SJAG_00438","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85307],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005754"},{"annotations":[104907,88986,99161,101111],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005756"}]},"cv_name":"cellular_component","definition":"The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex","termid":"GO:0005753"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00438":null,"SJAG_00915":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0000275","terms_by_termid":{"GO:0005754":null,"GO:0005756":null}}


id: PBO:0049570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 7","termid":"PBO:0049570"}


id: PBO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, centromeric (predicted)","termid":"PBO:0002216"}


id: MOD:00866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several dihydroxylated proline residues, such as (2S,3R,4R)-3,4-dihydroxyproline or (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated proline","synonyms":[{"name":"Hy2Pro","type":"exact"}],"termid":"MOD:00866"}


id: GO:1902816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to microtubule.","definition_xrefs":["GOC:vw","PMID:23087209","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to microtubule","synonyms":[{"name":"regulation of protein localisation to microtubule","type":"exact"}],"termid":"GO:1902816"}


id: GO:0047978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexadecanol + NAD+ = hexadecanal + NADH.","definition_xrefs":["EC:1.1.1.164","MetaCyc:HEXADECANOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hexadecanol (NAD+) dehydrogenase activity","secondary_identifiers":["RHEA:22056"],"synonyms":[{"name":"hexadecanol dehydrogenase activity","type":"broad"},{"name":"hexadecanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047978"}


id: GO:0017071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which cations ions may pass in response to an intracellular cyclic nucleotide binding to the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"intracellular cyclic nucleotide activated cation channel complex","termid":"GO:0017071"}


id: GO:0042968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"homoserine transport","termid":"GO:0042968"}


id: GO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum development","termid":"GO:0048726"}


id: GO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a myeloid dendritic cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell cytokine production","termid":"GO:0002371"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}


id: GO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte maturation","secondary_identifiers":["Wikipedia:Oocyte_maturation"],"termid":"GO:0001556"}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: PBO:0075837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 5","termid":"PBO:0075837"}


id: GO:0102411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-3-glucoside + UDP-alpha-D-glucose(2-) = quercetin 3,4'-O-diglucoside + UDP(3-).","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"quercetin-3,4'-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13766"],"termid":"GO:0102411"}


id: GO:0033809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + an anthocyanidin 3-O-beta-D-glucoside = CoA + an anthocyanidin 3-O-(6-O-malonyl-beta-D-glucoside).","definition_xrefs":["EC:2.3.1.171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"anthocyanin 6''-O-malonyltransferase activity","secondary_identifiers":["RHEA:16025","MetaCyc:2.3.1.171-RXN"],"synonyms":[{"name":"3MaT","type":"related"},{"name":"Dv3MaT","type":"related"},{"name":"malonyl-CoA:anthocyanidin-3-O-beta-D-glucoside 6''-O-malonyltransferase activity","type":"related"},{"name":"malonyl-coenzymeA:anthocyanidin-3-O-beta-D-glucoside 6''-O-malonyltransferase activity","type":"related"}],"termid":"GO:0033809"}


id: PBO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mid1 function is not conserved between pombe and japonicus","termid":"PBO:0018289"}


id: PBO:0041235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 74","termid":"PBO:0041235"}


id: PBO:0045067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG5 antisense RNA 1","termid":"PBO:0045067"}


id: GO:0042765
data:
  {"annotated_genes":["SJAG_03672","SJAG_05278","SJAG_00846","SJAG_03292","SJAG_02776"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83630,87543,88368,99839,110068],"is_not":false,"summary":null,"term":"GO:0042765"}]},"cv_name":"cellular_component","definition":"An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxy-terminus of a precursor protein to a GPI-anchor.","definition_xrefs":["GOC:rb","GOC:jl","PMID:12802054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caspase complex","termid":"GO:0008303"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GPI-anchor transamidase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPIT complex","type":"exact"}],"termid":"GO:0042765","terms_by_termid":{"GO:0042765":null}}


id: GO:1902483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pyroptotic cell death process that occurs in a cytotoxic T cell.","definition_xrefs":["PMID:32299851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyroptotic cell death","termid":"GO:0141201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell pyroptotic cell death","synonyms":[{"name":"cytotoxic T cell apoptosis","type":"related"},{"name":"cytotoxic T cell apoptotic process","type":"related"},{"name":"cytotoxic T cell pyroptotic process","type":"broad"},{"name":"cytotoxic T lymphocyte apoptotic process","type":"related"},{"name":"cytotoxic T-cell apoptosis","type":"related"},{"name":"cytotoxic T-cell programmed cell death","type":"related"}],"termid":"GO:1902483"}


id: _global:transcribed_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Inverse of transcribed_from.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_to","termid":"_global:transcribed_to"}


id: FYPO:0002842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to centromere outer repeat","synonyms":[{"name":"decreased protein localisation to centromere outer repeat","type":"exact"},{"name":"decreased protein localisation to centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric outer repeat region","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to pericentric region","type":"related"},{"name":"decreased protein localization to pericentromeric region","type":"related"},{"name":"reduced protein localization to centromere outer repeat","type":"exact"}],"termid":"FYPO:0002842"}


id: MOD:00315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts five L-cysteine residues, an L-histidine residue and a one-nickel four-iron five-sulfur cluster to pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide.","definition_xrefs":["PubMed:2550436","PubMed:11509720","RESID:AA0310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","synonyms":[{"name":"METAL Nickel-iron-sulfur (Ni-4Fe-5S)","type":"exact"},{"name":"METAL Nickel-iron-sulfur (Ni-4Fe-5S); via tele nitrogen","type":"exact"},{"name":"Ni-4Fe-5S cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"mu-1:2kappaS-sulfido-mu3-1:3:5kappaS-sulfido-mu3-2:3:4kappaS-sulfido-mu3-2:4:5kappaS-sulfido-mu3-3:4:5kappaS-sulfido-N1'-histidino-S-cysteinyl-1-iron-S-cysteinyl-2-nickel-3,4,5-tris-(S-cysteinyl iron)","type":"exact"},{"name":"pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","type":"exact"}],"termid":"MOD:00315"}


id: PBO:0003071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related protein Mfr1","termid":"PBO:0003071"}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: PBO:0040484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7","termid":"PBO:0040484"}


id: GO:0045448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The eukaryotic cell cycle in which a cell is duplicated without changing ploidy, occurring in the embryo.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}


id: GO:0031047
data:
  {"annotated_genes":["SJAG_02119","SJAG_01601","SJAG_03356","SJAG_01540","SJAG_04141","SJAG_01867","SJAG_01579","SJAG_04030","SJAG_02817","SJAG_03635","SJAG_03193","SJAG_02409","SJAG_04061","SJAG_02622","SJAG_04942","SJAG_03883","SJAG_04253","SJAG_04407","SJAG_00756","SJAG_03042","SJAG_02725","SJAG_01008","SJAG_00701","SJAG_01836","SJAG_02594","SJAG_03664","SJAG_02621","SJAG_04574","SJAG_00058","SJAG_00087","SJAG_02908","SJAG_03689","SJAG_00414","SJAG_03916","SJAG_01331","SJAG_04768","SJAG_04369","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83687,85962,88394,102666,107982,111771,114203],"is_not":false,"summary":null,"term":"GO:0031047"},{"annotations":[95689,114173,106607,112102,95254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033562"},{"annotations":[104610],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[103904,114176],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990431"},{"annotations":[113846],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[88008,88965,114202],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043628"},{"annotations":[103472,114177,100222,109796,109183,110687,105242,114069,107983,95691,103905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031048"},{"annotations":[103906,114179],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990432"},{"annotations":[105243,95693],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030422"},{"annotations":[102417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[106782,110428,84966,113791,114070,95694,114180,92875,95263,108335,91483,106612,112106,114898,110688,87424,85020,90237,111535,107328,102667,109798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"A process in which an regulatory non-coding RNA molecule reduces expression of target genes. This can occur pre-transcriptionally by assembly of heterochromatin and prevention of transcription or co- or post-transcriptionally by targeting RNAs for degradation or by interfering with splicing or translation. This process starts once the inhibitory RNA molecule has been transcribed, and includes processing of the RNA such as cleavage, modifications, transport from the nucleus to the cytoplasm, loading onto the RISC complex, and the effect on transcription or translation.","definition_xrefs":["PMID:15020054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00701":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01331":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02725":null,"SJAG_02817":null,"SJAG_02908":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03689":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04574":null,"SJAG_04768":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulatory ncRNA-mediated gene silencing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA-dependent gene silencing","type":"exact"},{"name":"RNA-mediated gene silencing","type":"related"},{"name":"gene silencing by RNA","type":"related"}],"termid":"GO:0031047","terms_by_termid":{"GO:0010964":null,"GO:0030422":null,"GO:0031047":null,"GO:0031048":null,"GO:0033562":null,"GO:0043628":null,"GO:0060906":null,"GO:0140727":null,"GO:1902795":null,"GO:1990431":null,"GO:1990432":null}}


id: PBO:0091577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by porcine CFL1","termid":"PBO:0091577"}


id: GO:0004734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pyrimidodiazepine + oxidized glutathione = 6-pyruvoyltetrahydropterin + 2 glutathione.","definition_xrefs":["EC:1.5.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, disulfide as acceptor","termid":"GO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrimidodiazepine synthase activity","secondary_identifiers":["RHEA:10720","MetaCyc:1.5.4.1-RXN"],"synonyms":[{"name":"PDA synthase activity","type":"related"},{"name":"pyrimidodiazepine:glutathione-disulfide oxidoreductase (ring-opening, cyclizing)","type":"related"}],"termid":"GO:0004734"}


id: PBO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.98","termid":"PBO:0005761"}


id: PBO:0041000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boule homolog, RNA binding protein","termid":"PBO:0041000"}


id: GO:0110154
data:
  {"annotated_genes":["SJAG_02213","SJAG_01746","SJAG_05010","SJAG_01625","SJAG_03157","SJAG_02374","SJAG_04880","SJAG_02370","SJAG_05694","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108123,87695,102246,106009,106058,109600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000290"},{"annotations":[88687,101691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031087"},{"annotations":[87696,106010,87475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110156"},{"annotations":[87838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110155"},{"annotations":[87812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of an RNA.","definition_xrefs":["GOC:sp","PMID:31101919","PMID:25533955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01625":null,"SJAG_01746":null,"SJAG_02213":null,"SJAG_02370":null,"SJAG_02374":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_04640":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA decapping","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110154","terms_by_termid":{"GO:0000290":null,"GO:0031087":null,"GO:0036450":null,"GO:0110155":null,"GO:0110156":null}}


id: MOD:00014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-cysteine.","definition_xrefs":["PubMed:1310545","PubMed:15790858","PubMed:6692818","RESID:AA0005","ChEBI:29950","DeltaMass:0","PubMed:3447159","PubMed:7338899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine residue","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"(R)-cysteine","type":"exact"},{"name":"2-amino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-amino-3-mercaptopropionic acid","type":"exact"},{"name":"2-azanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"3-mercapto-L-alanine","type":"exact"},{"name":"Cys","type":"exact"},{"name":"Cysteine (C, Cys)","type":"exact"},{"name":"L-(+)-cysteine","type":"exact"},{"name":"L-cysteine","type":"exact"},{"name":"alpha-amino-beta-mercaptopropanoic acid","type":"exact"},{"name":"alpha-amino-beta-mercaptopropionic acid","type":"exact"},{"name":"alpha-amino-beta-thiolpropionic acid","type":"exact"},{"name":"beta-mercaptoalanine","type":"exact"},{"name":"half-cystine","type":"exact"},{"name":"thioserine","type":"exact"}],"termid":"MOD:00014"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PBO:0048333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 44","termid":"PBO:0048333"}


id: GO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the metanephros progresses from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in metanephros development (obsolete GO:0072212)","termid":"GO:0072212"}


id: PBO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcipressin (predicted)","termid":"PBO:0000202"}


id: GO:0000735
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000736"}]},"cv_name":"biological_process","definition":"The removal of nonhomologous sequences at the broken 3' single-strand DNA end before DNA repair synthesis can occur.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"removal of nonhomologous ends","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000735","terms_by_termid":{"GO:0000736":null}}


id: PBO:0039912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 10 like","termid":"PBO:0039912"}


id: PBO:0074609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14A","termid":"PBO:0074609"}


id: GO:0035178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fine-tuning the spatial position of an organism in response to variability in their environment. For example, reorientation of an organism in the direction of a food source.","definition_xrefs":["PMID:10880478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"turning behavior","synonyms":[{"name":"turning behaviour","type":"exact"}],"termid":"GO:0035178"}


id: PBO:0059985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 5","termid":"PBO:0059985"}


id: GO:0090285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:pr","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein glycosylation in Golgi (obsolete GO:0090285)","synonyms":[{"name":"negative regulation of protein amino acid glycosylation in Golgi","type":"exact"}],"termid":"GO:0090285"}


id: GO:0100058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phenotypic switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100058)","termid":"GO:0100058"}


id: PBO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 12","termid":"PBO:0044040"}


id: GO:0047943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + methylammonium = N(5)-methyl-L-glutamine + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:17117","EC:6.3.4.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"glutamate-methylamine ligase activity","secondary_identifiers":["KEGG_REACTION:R01585","MetaCyc:GLUTAMATE--METHYLAMINE-LIGASE-RXN"],"synonyms":[{"name":"L-glutamate:methylamine ligase (ADP-forming)","type":"related"},{"name":"gamma-glutamylmethylamide synthetase activity","type":"related"}],"termid":"GO:0047943"}


id: PBO:0080861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 2","termid":"PBO:0080861"}


id: PBO:0064111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD1L1 antisense RNA 1","termid":"PBO:0064111"}


id: GO:0048377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a lateral mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"lateral mesodermal cell fate commitment","termid":"GO:0048372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell fate specification","synonyms":[{"name":"lateral mesoderm cell fate specification","type":"exact"},{"name":"lateral plate mesoderm cell fate specification","type":"exact"},{"name":"lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048377"}


id: PBO:0043151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 19","termid":"PBO:0043151"}


id: PBO:0086199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated","termid":"PBO:0086199"}


id: PBO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17","termid":"PBO:0070891"}


id: PBO:0056881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 1","termid":"PBO:0056881"}


id: PBO:0017576
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression level is tightly controlled so that deletion of either copy is compensated","termid":"PBO:0017576"}


id: PBO:0075681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1","termid":"PBO:0075681"}


id: GO:1904544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of free ubiquitin chain polymerization.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie","PMID:24660806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein polymerization","termid":"GO:0032273"},{"relation_name":"is_a","term_name":"regulation of free ubiquitin chain polymerization","termid":"GO:1904542"},{"relation_name":"positively_regulates","term_name":"free ubiquitin chain polymerization","termid":"GO:0010994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of free ubiquitin chain polymerization","synonyms":[{"name":"activation of free ubiquitin chain polymerization","type":"narrow"},{"name":"up regulation of free ubiquitin chain polymerization","type":"exact"},{"name":"up-regulation of free ubiquitin chain polymerization","type":"exact"},{"name":"upregulation of free ubiquitin chain polymerization","type":"exact"}],"termid":"GO:1904544"}


id: GO:0048938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a glial cell in a lateral line nerve is generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"}


id: GO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to histone deacetylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"histone deacetylase binding","termid":"GO:0042826"}


id: PBO:0065622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 2","termid":"PBO:0065622"}


id: GO:0010440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an unspecialized epidermal cell progresses through a series of divisions that culminate in the production of a stomatal complex.","definition_xrefs":["GOC:tb","GOC:expert_db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal lineage progression","termid":"GO:0010440"}


id: PBO:0004506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter Liz1","termid":"PBO:0004506"}


id: PBO:0068050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 355","termid":"PBO:0068050"}


id: PBO:0060792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S3","termid":"PBO:0060792"}


id: PBO:0049090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 146","termid":"PBO:0049090"}


id: GO:0051665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which membrane rafts are transported to, or maintained in, a specific location. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:ai","PMID:16645198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"membrane raft localization","synonyms":[{"name":"establishment and maintenance of membrane raft localization","type":"exact"},{"name":"lipid raft localization","type":"exact"},{"name":"membrane raft localisation","type":"exact"}],"termid":"GO:0051665"}


id: GO:0071166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a ribonucleoprotein complex is transported to, or maintained in, a specific location within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ribonucleoprotein complex localization","synonyms":[{"name":"RNP localization","type":"exact"},{"name":"cellular ribonucleoprotein complex localization","type":"exact"},{"name":"establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:0071166"}


id: GO:0046859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a hydrogenosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"hydrogenosome","termid":"GO:0042566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"hydrogenosomal membrane","synonyms":[{"name":"hydrogenosome membrane","type":"exact"}],"termid":"GO:0046859"}


id: PBO:0040586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACE1 antisense RNA","termid":"PBO:0040586"}


id: GO:0009615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to virus","synonyms":[{"name":"response to viruses","type":"exact"}],"termid":"GO:0009615"}


id: PATO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of temperature.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of temperature","termid":"PATO:0001304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant temperature","termid":"PATO:0001314"}


id: RO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","termid":"RO:0002215"}


id: FYECO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"LNB medium is a Low Nutrient medium containing yeast nitrogen base without amino acids, glucose, salts and vitamins.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNB glucose medium","termid":"FYECO:0000328"}


id: PBO:0091449
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds S. pombe telomeric repeats with flexible sequence recognition requirements","termid":"PBO:0091449"}


id: PBO:0055321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2749","termid":"PBO:0055321"}


id: GO:0042046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"broad"},{"name":"Moco metabolism","type":"broad"},{"name":"W-molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0042046"}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: PR:O94365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02472","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.19c","secondary_identifiers":["UniProtKB:O94365"],"synonyms":[{"name":"Spom972h-UTP15","type":"exact"},{"name":"U3 protein 15 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94365"}


id: GO:0048482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ovule are generated and organized. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"},{"relation_name":"part_of","term_name":"plant ovule development","termid":"GO:0048481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule morphogenesis","termid":"GO:0048482"}


id: PR:Q9P4X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi4 gene.","definition_xrefs":["UniProtKB:Q9P4X1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C959.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.05c","synonyms":[{"name":"Spom972h-pdi4","type":"exact"},{"name":"protein disulfide isomerase C959.05c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P4X1"}


id: PBO:0040802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e40","termid":"PBO:0040802"}


id: PBO:0053954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1259","termid":"PBO:0053954"}


id: PBO:0087885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor, activator; role in cellular adjustment to osmotic stress including modulation of mating efficiency; involved in repression of subset of hypoxic genes by Rox1p, repression of several DAN/TIR genes during aerobic growth, ergosterol biosynthetic genes in response to hyperosmotic stress; contributes to recruitment of Tup1p-Cyc8p general repressor to promoters; relocalizes to cytosol under hypoxia; forms [MOT3+] prion under anaerobic conditions","termid":"PBO:0087885"}


id: FYPO:0007875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:34382996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"},{"relation_name":"is_a","term_name":"normal protein transport","termid":"FYPO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to actin fusion focus","synonyms":[{"name":"normal protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0007875"}


id: PBO:0063899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class V","termid":"PBO:0063899"}


id: PBO:0061982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 4","termid":"PBO:0061982"}


id: PBO:0087969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transverse filament protein of the synaptonemal complex; required for normal levels of meiotic recombination and pairing between homologous chromosome during meiosis; required for meiotic recombination between non-allelc sites; potential Cdc28p substrate","termid":"PBO:0087969"}


id: GO:0005978
data:
  {"annotated_genes":["SJAG_01209","SJAG_00963","SJAG_01376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105023],"is_not":false,"summary":null,"term":"GO:0005978"},{"annotations":[87093,77791],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen metabolic process","termid":"GO:0005977"},{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01209":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glycogen biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYCOGENSYNTH-PWY","MetaCyc:PWY-7900","MetaCyc:PWY-5067"],"synonyms":[{"name":"glycogen anabolism","type":"exact"},{"name":"glycogen biosynthesis","type":"exact"},{"name":"glycogen formation","type":"exact"},{"name":"glycogen synthesis","type":"exact"}],"termid":"GO:0005978","terms_by_termid":{"GO:0005978":null,"GO:0045719":null}}


id: PBO:0065717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 1","termid":"PBO:0065717"}


id: PBO:0055136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2555","termid":"PBO:0055136"}


id: PBO:0064418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinin, desmosome associated protein","termid":"PBO:0064418"}


id: PBO:0012227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit (predicted)","termid":"PBO:0012227"}


id: RO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of endoparasite-of in which the parasite inhabits host cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"endoparasite_of","termid":"RO:0002634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular_endoparasite_of","termid":"RO:0002640"}


id: FYPO:0002802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location at the cell cortex when the cell is subject to nitrogen starvation. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"nucleus mislocalized to cell cortex during nitrogen starvation","synonyms":[{"name":"nuclear displacement to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus displaced to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalised to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen depletion","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002802"}


id: GO:0033686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"},{"relation_name":"positively_regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of luteinizing hormone secretion","synonyms":[{"name":"activation of luteinizing hormone secretion","type":"narrow"},{"name":"stimulation of luteinizing hormone secretion","type":"narrow"},{"name":"up regulation of luteinizing hormone secretion","type":"exact"},{"name":"up-regulation of luteinizing hormone secretion","type":"exact"},{"name":"upregulation of luteinizing hormone secretion","type":"exact"}],"termid":"GO:0033686"}


id: PBO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member K, pseudogene","termid":"PBO:0046986"}


id: PATO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000830 relative visual ability value (obsolete PATO:0000830)","termid":"PATO:0000830"}


id: GO:0016869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"intramolecular aminotransferase activity","secondary_identifiers":["EC:5.4.3.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring amino groups","type":"exact"}],"termid":"GO:0016869"}


id: PBO:0091662
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 0.46","termid":"PBO:0091662"}


id: GO:0032414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ion transmembrane transporter activity","synonyms":[{"name":"activation of ion transporter activity","type":"narrow"},{"name":"positive regulation of ion transporter activity","type":"exact"},{"name":"stimulation of ion transporter activity","type":"narrow"},{"name":"up regulation of ion transporter activity","type":"exact"},{"name":"up-regulation of ion transporter activity","type":"exact"},{"name":"upregulation of ion transporter activity","type":"exact"}],"termid":"GO:0032414"}


id: PR:Q9UUD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An sre1-type sterol regulatory element-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","UniProtKB:Q9UUD1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sre1-type sterol regulatory element-binding protein 1","termid":"PR:000028989"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.09","synonyms":[{"name":"Spom972h-sre1","type":"exact"}],"termid":"PR:Q9UUD1"}


id: PBO:0085531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication","termid":"PBO:0085531"}


id: GO:0010730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species biosynthetic process","termid":"GO:1903427"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"negative regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010730"}


id: GO:1902086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumagillin.","definition_xrefs":["GOC:TermGenie","PMID:23488861","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fumagillin biosynthetic process","synonyms":[{"name":"fumagillin anabolism","type":"exact"},{"name":"fumagillin biosynthesis","type":"exact"},{"name":"fumagillin formation","type":"exact"},{"name":"fumagillin synthesis","type":"exact"}],"termid":"GO:1902086"}


id: PBO:0110974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2462 family protein, human Leydig cell tumor 10 kDa protein homolog, implicated in rRNA transcription or rRNA processing","termid":"PBO:0110974"}


id: GO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any component or product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:pg","GOC:ai","GOC:add","ISBN:0781735149","PMID:11884446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement receptor activity","secondary_identifiers":["GO:0004942"],"synonyms":[{"name":"anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004875"}


id: GO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"negatively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antipodal cell differentiation","synonyms":[{"name":"down regulation of antipodal cell differentiation","type":"exact"},{"name":"down-regulation of antipodal cell differentiation","type":"exact"},{"name":"downregulation of antipodal cell differentiation","type":"exact"},{"name":"inhibition of antipodal cell differentiation","type":"narrow"}],"termid":"GO:0045689"}


id: PBO:0029153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cumene_hydroperoxide","termid":"PBO:0029153"}


id: PBO:0072697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and SH3 domain containing 2","termid":"PBO:0072697"}


id: GO:0018742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the ether in chloro- or hydroxyepoxypropane to produce chloropropane diol or glycerol. Acts on R enantiomers.","definition_xrefs":["UM-BBD_enzymeID:e0051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"epoxide hydrolase B activity","termid":"GO:0018742"}


id: GO:0033557
data:
  {"annotated_genes":["SJAG_05237","SJAG_05180"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95410,97293],"is_not":false,"summary":null,"term":"GO:0033557"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses an endonuclease activity that specifically cleaves certain types of branched DNA structures; because such structures often form during the replication ribosomal DNA (rDNA) repeats, the complex plays a role in the maintenance of rDNA. The subunits are known as Slx1 and Slx 4 in budding and fission yeasts, and are conserved in eukaryotes.","definition_xrefs":["PMID:16467377","PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Slx1-Slx4 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033557","terms_by_termid":{"GO:0033557":null}}


id: PBO:0065400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 3 pseudogene 1","termid":"PBO:0065400"}


id: PBO:0070615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 83","termid":"PBO:0070615"}


id: PBO:0001158
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zellweger syndrome","termid":"PBO:0001158"}


id: GO:0009502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A series of membrane-linked oxidation-reduction reactions in which electrons are transferred from an initial electron donor through a series of intermediates to a final electron acceptor (usually oxygen).","definition_xrefs":["GOC:mtg_electron_transport","ISBN:0140514031"],"gene_count":0,"genotype_count":0,"name":"obsolete photosynthetic electron transport chain (obsolete GO:0009502)","synonyms":[{"name":"photosynthetic electron transport chain","type":"exact"}],"termid":"GO:0009502"}


id: GO:0008176
data:
  {"annotated_genes":["SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115068],"is_not":false,"summary":null,"term":"GO:0008176"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine46 in tRNA + S-adenosyl-L-methionine = N7-methylguanosine46 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:42708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tRNA (guanine(46)-N7)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.33","MetaCyc:TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN","Reactome:R-HSA-6782286"],"synonyms":[{"name":"7-methylguanine transfer ribonucleate methylase activity","type":"broad"},{"name":"N7-methylguanine methylase activity","type":"broad"},{"name":"tRNA (guanine(46)-N7-)-methyltransferase activity","type":"exact"},{"name":"tRNA (guanine-N7-)-methyltransferase activity","type":"broad"},{"name":"tRNA (guanosine(46)-N(7))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(46)-N7)-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(46)-N7-)-methyltransferase activity","type":"exact"},{"name":"tRNA guanine 7-methyltransferase activity","type":"broad"}],"termid":"GO:0008176","terms_by_termid":{"GO:0008176":null}}


id: MOD:01445
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["PubMed:11435113","RESID:AA0492#SER","PubMed:17558559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Ser)","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01445"}


id: PBO:0002118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Vps8 (predicted)","termid":"PBO:0002118"}


id: PR:Q9Y7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11937:SF16","PRO:DNx","OMA:SCHPO03309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein arp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.10","secondary_identifiers":["UniProtKB:Q9Y7X8"],"synonyms":[{"name":"Spom972h-ACTR5","type":"exact"}],"termid":"PR:Q9Y7X8"}


id: PBO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8","termid":"PBO:0002437"}


id: PBO:0055884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit B","termid":"PBO:0055884"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: PBO:0049913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM P-TEFb complex subunit 1","termid":"PBO:0049913"}


id: GO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction dependent upon immune response","termid":"GO:0002654"},{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"positively_regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral tolerance induction","synonyms":[{"name":"activation of peripheral tolerance induction","type":"narrow"},{"name":"stimulation of peripheral tolerance induction","type":"narrow"},{"name":"up regulation of peripheral tolerance induction","type":"exact"},{"name":"up-regulation of peripheral tolerance induction","type":"exact"},{"name":"upregulation of peripheral tolerance induction","type":"exact"}],"termid":"GO:0002660"}


id: FYPO:0002382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation occurs to a greater extent than normal in centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H4 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H4 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H4 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H4 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002382"}


id: PR:O74438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.08c","synonyms":[{"name":"Spom972h-mcp2","type":"exact"}],"termid":"PR:O74438"}


id: PBO:0088888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic methionine-tRNA ligase Mrs1","termid":"PBO:0088888"}


id: PBO:0061395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephronectin","termid":"PBO:0061395"}


id: GO:0102256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: neoagarohexaose + H2O = 3,6-anhydro-alpha-L-galactopyranose + agaropentaose.","definition_xrefs":["EC:3.2.1.159","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"neoagarohexaose 1,3-alpha-3,6-anhydro-L-galactosidase activity","secondary_identifiers":["MetaCyc:RXN-12429"],"termid":"GO:0102256"}


id: PR:O13794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11203:SF11","PRO:DNx","OMA:SCHPO01509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoribonuclease ysh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.16c","secondary_identifiers":["UniProtKB:O13794"],"synonyms":[{"name":"Spom972h-CPSF3","type":"exact"},{"name":"mRNA 3'-end-processing protein ysh1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13794"}


id: GO:0019569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arabinose catabolic process","termid":"GO:0019572"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-arabinose catabolic process to xylulose 5-phosphate","secondary_identifiers":["MetaCyc:ARABCAT-PWY"],"synonyms":[{"name":"L-arabinose breakdown to xylulose 5-phosphate","type":"exact"},{"name":"L-arabinose degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019569"}


id: GO:0000906
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106500],"is_not":false,"summary":null,"term":"GO:0000906"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-2-butanone-4-phosphate + 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione = 6,7-dimethyl-8-ribityllumazine + phosphate.","definition_xrefs":["PMID:7559556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LUMAZINESYN-RXN","RHEA:26152","EC:2.5.1.78"],"synonyms":[{"name":"lumazine synthase activity","type":"broad"}],"termid":"GO:0000906","terms_by_termid":{"GO:0000906":null}}


id: PBO:0054189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1564","termid":"PBO:0054189"}


id: PBO:0086901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter of the MRP subfamily; contains a stop codon in S288C; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds; MRP stands for multidrug resistance-associated protein","termid":"PBO:0086901"}


id: GO:0060578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior vena cava morphogenesis","termid":"GO:0060578"}


id: PBO:0055478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2911","termid":"PBO:0055478"}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: FYPO:0002754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cysteine synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}


id: PBO:0041674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 2","termid":"PBO:0041674"}


id: PBO:0053222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 2","termid":"PBO:0053222"}


id: GO:1990631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the protein-tyrosine kinase receptor ErbB-4/HER4.","definition_xrefs":["PMID:18523588","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ErbB-4 class receptor binding","synonyms":[{"name":"HER4 receptor binding","type":"exact"}],"termid":"GO:1990631"}


id: PBO:0057200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 372","termid":"PBO:0057200"}


id: PBO:0059089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 2","termid":"PBO:0059089"}


id: GO:0032507
data:
  {"annotated_genes":["SJAG_00368","SJAG_01001","SJAG_04982","SJAG_00661","SJAG_01993","SJAG_01017","SJAG_00030","SJAG_01738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[90169,96302,106986,100763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[110444,93869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.","definition_xrefs":["GOC:isa_complete","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location","termid":"GO:0045185"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01738":null,"SJAG_01993":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of protein localization in cell","type":"related"}],"termid":"GO:0032507","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0042989":null,"GO:0097248":null}}


id: PBO:0076547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1 pseudogene 1","termid":"PBO:0076547"}


id: PBO:0003260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Cta3","termid":"PBO:0003260"}


id: GO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines.","definition_xrefs":["PMID:9082980","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TRAIL binding","synonyms":[{"name":"Apo-2L binding","type":"exact"}],"termid":"GO:0045569"}


id: GO:0004764
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87261],"is_not":false,"summary":null,"term":"GO:0004764"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+.","definition_xrefs":["EC:1.1.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:17737","KEGG_REACTION:R02413","EC:1.1.1.282","MetaCyc:SHIKIMATE-5-DEHYDROGENASE-RXN"],"synonyms":[{"name":"5-dehydroshikimate reductase activity","type":"related"},{"name":"5-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NADP(+) 5-oxidoreductase activity","type":"related"},{"name":"shikimate:NADP(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0004764","terms_by_termid":{"GO:0004764":null}}


id: GO:0072298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of metanephric glomerulus development, the progression of the metanephric glomerulus over time from its initial formation until its mature state. The metanephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephros development","termid":"GO:0001656"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"regulates","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric glomerulus development","termid":"GO:0072298"}


id: PBO:0003360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl pyrophosphate synthetase","termid":"PBO:0003360"}


id: PBO:0081668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 589","termid":"PBO:0081668"}


id: PBO:0049350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 8","termid":"PBO:0049350"}


id: GO:0141174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts anti-inflammatory cytokine signaling in the host organism, either by disruption of production, sequesteration, or destruction of at least one component of the signaling pathway.  Anti-inflammatory cytokines include: interleukin (IL)-1, IL-4, IL-6, IL-10, IL-11, and IL-13. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19168731","PMID:29720526","PMID:32754056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host anti-inflammatory cytokine signaling","synonyms":[{"name":"negative regulation by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine secretion","type":"related"},{"name":"symbiont-mediated degradation of host anti-inflammatory cytokine","type":"narrow"},{"name":"symbiont-mediated sequestering of host anti-inflammatory cytokine","type":"related"},{"name":"symbiont-mediated suppression of host anti-inflammatory cytokine production","type":"related"}],"termid":"GO:0141174"}


id: GO:1901167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chlorocatechol.","definition_xrefs":["UniPathway:UPA00083","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol metabolic process","synonyms":[{"name":"3-chlorocatechol metabolism","type":"exact"}],"termid":"GO:1901167"}


id: PBO:0083788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA maturation and ribosomal assembly; involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles","termid":"PBO:0083788"}


id: PBO:0109354
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase holoenzyme component","termid":"PBO:0109354"}


id: PBO:0011523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase Rrg1 (predicted)","termid":"PBO:0011523"}


id: PBO:0108618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 family member C","termid":"PBO:0108618"}


id: GO:2000831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of steroid hormone secretion","termid":"GO:2000831"}


id: PBO:0072234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 9","termid":"PBO:0072234"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: GO:0031343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell killing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell killing","synonyms":[{"name":"activation of cell killing","type":"narrow"},{"name":"stimulation of cell killing","type":"narrow"},{"name":"up regulation of cell killing","type":"exact"},{"name":"up-regulation of cell killing","type":"exact"},{"name":"upregulation of cell killing","type":"exact"}],"termid":"GO:0031343"}


id: PBO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 17 pseudogene","termid":"PBO:0042642"}


id: FYPO:0005147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished proteasome localization to nuclear periphery","synonyms":[{"name":"abolished proteasome localisation to nuclear periphery","type":"exact"},{"name":"abolished proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abolished proteasome localization to nuclear periphery during vegetative growth","type":"exact"},{"name":"proteasome localization to nuclear periphery abolished","type":"exact"}],"termid":"FYPO:0005147"}


id: GO:0098997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with the host cell outer membrane during viral entry.","definition_xrefs":["VZ:3941","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of virus membrane with host outer membrane","synonyms":[{"name":"fusion of viral membrane with host outer membrane","type":"related"},{"name":"viral envelope fusion","type":"broad"},{"name":"viral envelope fusion with host outer membrane","type":"exact"},{"name":"viral penetration via membrane fusion","type":"broad"},{"name":"viral-cell fusion molecule activity","type":"related"}],"termid":"GO:0098997"}


id: GO:0002645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction","synonyms":[{"name":"activation of tolerance induction","type":"narrow"},{"name":"stimulation of tolerance induction","type":"narrow"},{"name":"up regulation of tolerance induction","type":"exact"},{"name":"up-regulation of tolerance induction","type":"exact"},{"name":"upregulation of tolerance induction","type":"exact"}],"termid":"GO:0002645"}


id: GO:0043977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K5 acetylation (obsolete GO:0043977)","synonyms":[{"name":"histone H2A acetylation at K5","type":"exact"}],"termid":"GO:0043977"}


id: GO:0033084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immature T cell proliferation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"regulates","term_name":"immature T cell proliferation in thymus","termid":"GO:0033080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immature T cell proliferation in thymus","synonyms":[{"name":"regulation of thymic T cell proliferation","type":"exact"},{"name":"regulation of thymocyte cell proliferation","type":"exact"},{"name":"regulation of thymocyte proliferation","type":"exact"}],"termid":"GO:0033084"}


id: PBO:0069086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 333, pseudogene","termid":"PBO:0069086"}


id: GO:0140396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: (1'S,5'S)-hydroxyaverantin + NAD+ = 5'-oxoaverantin + NADH.","definition_xrefs":["PMID:14602595","EC:1.1.1.352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5'-hydroxyaverantin dehydrogenase activity","secondary_identifiers":["RHEA:35475"],"termid":"GO:0140396"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: PBO:0030102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_citrulline_level","termid":"PBO:0030102"}


id: PBO:0066962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 264","termid":"PBO:0066962"}


id: SO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome may be generated by recombination between two inversions; presumed to have a deficiency or duplication at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid_chromosome","termid":"SO:0000550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_aneuploid_chromosome","synonyms":[{"name":"inversion derived aneuploid chromosome","type":"exact"}],"termid":"SO:0000567"}


id: GO:0046690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tellurium ion","synonyms":[{"name":"response to tellurium","type":"exact"},{"name":"tellurium sensitivity/resistance","type":"related"}],"termid":"GO:0046690"}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: PBO:0086304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with CoA transferase activity; particularly for CoASH transfer from succinyl-CoA to acetate; has minor acetyl-CoA-hydrolase activity; phosphorylated; required for acetate utilization and for diploid pseudohyphal growth","termid":"PBO:0086304"}


id: GO:0006640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoacylglycerol metabolic process","termid":"GO:0046462"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoacylglycerol biosynthetic process","synonyms":[{"name":"monoacylglycerol anabolism","type":"exact"},{"name":"monoacylglycerol biosynthesis","type":"exact"},{"name":"monoacylglycerol formation","type":"exact"},{"name":"monoacylglycerol synthesis","type":"exact"},{"name":"monoglyceride biosynthesis","type":"exact"},{"name":"monoglyceride biosynthetic process","type":"exact"}],"termid":"GO:0006640"}


id: SO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is positively autoregulated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"positively_autoregulated","termid":"SO:0000475"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_autoregulated_gene","synonyms":[{"name":"positively autoregulated gene","type":"exact"}],"termid":"SO:0000892"}


id: GO:1900522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to amylopectin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to amylopectin","termid":"GO:1900521"},{"relation_name":"negatively_regulates","term_name":"response to amylopectin","termid":"GO:0044591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to amylopectin","synonyms":[{"name":"down regulation of response to amylopectin","type":"exact"},{"name":"down-regulation of response to amylopectin","type":"exact"},{"name":"downregulation of response to amylopectin","type":"exact"},{"name":"inhibition of response to amylopectin","type":"narrow"}],"termid":"GO:1900522"}


id: GO:0035368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a selenocysteine insertion sequence (SECIS), a regulatory sequence within mRNA which directs incorporation of a selenocysteine at a stop codon (UGA) during translation.","definition_xrefs":["GOC:imk","PMID:10760958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"selenocysteine insertion sequence binding","synonyms":[{"name":"SECIS binding","type":"exact"}],"termid":"GO:0035368"}


id: PBO:0073882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 11 member 2","termid":"PBO:0073882"}


id: GO:0010711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of collagen catabolic process","termid":"GO:0010710"},{"relation_name":"is_a","term_name":"negative regulation of collagen metabolic process","termid":"GO:0010713"},{"relation_name":"negatively_regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen catabolic process","synonyms":[{"name":"down regulation of collagen catabolic process","type":"exact"},{"name":"down-regulation of collagen catabolic process","type":"exact"},{"name":"downregulation of collagen catabolic process","type":"exact"},{"name":"inhibition of collagen catabolic process","type":"narrow"},{"name":"negative regulation of collagen breakdown","type":"exact"},{"name":"negative regulation of collagen catabolism","type":"exact"},{"name":"negative regulation of collagen degradation","type":"exact"}],"termid":"GO:0010711"}


id: PBO:0004625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein (predicted)","termid":"PBO:0004625"}


id: GO:0046970
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100328],"is_not":false,"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H4K16 deacetylase activity","termid":"GO:0034739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0019213","GO:0016787","GO:0033558","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent histone H4K16 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H4-K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046970","terms_by_termid":{"GO:0046970":null}}


id: GO:0003265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardioblast proliferation in the primary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. In mammals the primary heart field gives rise to the left ventricle.","definition_xrefs":["GOC:rl","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primary heart field cardioblast proliferation","synonyms":[{"name":"regulation of FHF cardioblast proliferation","type":"exact"},{"name":"regulation of first heart field cardiac proliferation","type":"related"},{"name":"regulation of first heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003265"}


id: PBO:0017512
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis","termid":"PBO:0017512"}


id: PBO:0041789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 2","termid":"PBO:0041789"}


id: GO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyindolin-2-one + O2 + reduced [NADPH--hemoprotein reductase] = 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxyindolin-2-one monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07422","EC:1.14.14.109"],"synonyms":[{"name":"3-hydroxyindolin-2-one,NAD(P)H:oxygen oxidoreductase (2-hydroxy-2H-1,4-benzoxazin-3(4H)-one-forming)","type":"related"}],"termid":"GO:0036192"}


id: PBO:0088391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX/TREX2 complex subunit Pci2","termid":"PBO:0088391"}


id: GO:0009039
data:
  {"annotated_genes":["SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87597],"is_not":false,"summary":null,"term":"GO:0009039"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: urea + H2O = CO2 + 2 NH3.","definition_xrefs":["EC:3.5.1.5","RHEA:20557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"urease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r0120","MetaCyc:UREASE-RXN"],"synonyms":[{"name":"urea amidohydrolase activity","type":"related"}],"termid":"GO:0009039","terms_by_termid":{"GO:0009039":null}}


id: PBO:0013782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1 (predicted)","termid":"PBO:0013782"}


id: GO:0097572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.","definition_xrefs":["GOC:giardia","ISBN:0-444-81258-X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"right nucleus","termid":"GO:0097572"}


id: PBO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit, Fip1 homolog (predicted)","termid":"PBO:0000575"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: FYPO:0001414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sulfide (S2-). Cells stop growing (and may die) at a concentration of sulfide ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sulfide","synonyms":[{"name":"hypersensitive to sulfide","type":"exact"},{"name":"sensitive to sulfide during mitotic cell cycle","type":"related"},{"name":"sensitive to sulfide during vegetative growth","type":"exact"},{"name":"sensitive to sulfide ions","type":"exact"},{"name":"sensitive to sulphide","type":"exact"}],"termid":"FYPO:0001414"}


id: PBO:0067050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 70, pseudogene","termid":"PBO:0067050"}


id: PBO:0038450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0038450"}


id: GO:1900945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"negatively_regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isoprene metabolic process","synonyms":[{"name":"down regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"down regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"down regulation of hemiterpene metabolic process","type":"exact"},{"name":"down regulation of hemiterpene metabolism","type":"exact"},{"name":"down regulation of isoprene metabolic process","type":"exact"},{"name":"down regulation of isoprene metabolism","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"down-regulation of hemiterpene metabolic process","type":"exact"},{"name":"down-regulation of hemiterpene metabolism","type":"exact"},{"name":"down-regulation of isoprene metabolic process","type":"exact"},{"name":"down-regulation of isoprene metabolism","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"downregulation of hemiterpene metabolic process","type":"exact"},{"name":"downregulation of hemiterpene metabolism","type":"exact"},{"name":"downregulation of isoprene metabolic process","type":"exact"},{"name":"downregulation of isoprene metabolism","type":"exact"},{"name":"inhibition of 2-methyl-1,3-butadiene metabolic process","type":"narrow"},{"name":"inhibition of 2-methyl-1,3-butadiene metabolism","type":"narrow"},{"name":"inhibition of hemiterpene metabolic process","type":"narrow"},{"name":"inhibition of hemiterpene metabolism","type":"narrow"},{"name":"inhibition of isoprene metabolic process","type":"narrow"},{"name":"inhibition of isoprene metabolism","type":"narrow"},{"name":"negative regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"negative regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"negative regulation of hemiterpene metabolic process","type":"exact"},{"name":"negative regulation of hemiterpene metabolism","type":"exact"},{"name":"negative regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900945"}


id: PBO:0064257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A5","termid":"PBO:0064257"}


id: PBO:0076979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine hydroxylase","termid":"PBO:0076979"}


id: PBO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit beta 1","termid":"PBO:0052601"}


id: FYPO:0004920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a catalytic activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of molecular function","termid":"FYPO:0004919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal regulation of catalytic activity","synonyms":[{"name":"normal regulation of catalytic activity during mitotic cell cycle","type":"related"},{"name":"normal regulation of catalytic activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004920"}


id: GO:0050325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + tauropine = H+ + NADH + pyruvate + taurine.","definition_xrefs":["EC:1.5.1.23","RHEA:12580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tauropine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01683","MetaCyc:TAUROPINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"},{"name":"N2-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"}],"termid":"GO:0050325"}


id: GO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antifungal peptide.","definition_xrefs":["GOC:add","PMID:15638771","ISBN:0781735149","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"},{"relation_name":"part_of","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}


id: GO:0061663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 to a substrate protein via the reaction X-NEDD8 + S = X + S-NEDD8, where X is either an E2 or E3 enzyme, the X-NEDD8 linkage is a thioester bond, and the S-NEDD8 linkage is an isopeptide bond between the C-terminal amino acid of NEDD8 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NEDD8 transferase activity","termid":"GO:0019788"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0140096","GO:0016740","GO:0019787","GO:0003824"],"is_obsolete":false,"name":"NEDD8 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061663"}


id: PATO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting increased activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"behavioural active","termid":"PATO:0001707"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased behavioural activity","synonyms":[{"name":"hyperactive","type":"exact"}],"termid":"PATO:0000760"}


id: FYPO:0003570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"}


id: PBO:0064805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A pseudogene 2","termid":"PBO:0064805"}


id: FYPO:0002261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which N-glycan processing is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal N-glycan processing","synonyms":[{"name":"abnormal N-glycan catabolism","type":"related"},{"name":"abnormal N-glycan degradation","type":"related"},{"name":"abnormal N-glycan processing during mitotic cell cycle","type":"related"},{"name":"abnormal N-glycan processing during vegetative growth","type":"exact"},{"name":"abnormal N-linked glycoprotein maturation","type":"exact"}],"termid":"FYPO:0002261"}


id: GO:1905717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cornification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"positively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cornification","synonyms":[{"name":"activation of cornification","type":"narrow"},{"name":"up regulation of cornification","type":"exact"},{"name":"up-regulation of cornification","type":"exact"},{"name":"upregulation of cornification","type":"exact"}],"termid":"GO:1905717"}


id: GO:1903882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:krc","GOC:TermGenie","PMID:20054338","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"negatively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of IL-17-mediated signalling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"negative regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903882"}


id: GO:0015864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside transport","termid":"GO:0015864"}


id: GO:0043938
data:
  {"annotated_genes":["SJAG_04853","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86894],"is_not":false,"summary":null,"term":"GO:0043938"},{"annotations":[98417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043938","terms_by_termid":{"GO:0043938":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:0140107
data:
  {"annotated_genes":["SJAG_01353","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85685,93143],"is_not":false,"summary":null,"term":"GO:0140107"}]},"cv_name":"molecular_function","definition":"Enables the transfer of potassium ions from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10629185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity potassium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140107","terms_by_termid":{"GO:0140107":null}}


id: PR:O42941
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase cyp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.05c","synonyms":[{"name":"PPIase cyp7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cyp7","type":"exact"},{"name":"complexed with cdc5 protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cyclophilin 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase cyp7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42941"}


id: PBO:0058385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4757","termid":"PBO:0058385"}


id: PBO:0003323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metalloendopeptidase (predicted)","termid":"PBO:0003323"}


id: PBO:0072127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 4","termid":"PBO:0072127"}


id: PBO:0073389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETD4 antisense RNA 1","termid":"PBO:0073389"}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["EC:2.4.1.219","RHEA:19385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05882","MetaCyc:2.4.1.219-RXN"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: PBO:0063719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I","termid":"PBO:0063719"}


id: PBO:0029477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cerulenin","termid":"PBO:0029477"}


id: PBO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family protein Opt3","termid":"PBO:0018207"}


id: GO:1902753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["PMID:1526373","GOC:hjd","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal amino acid absorption","termid":"GO:1902752"},{"relation_name":"negatively_regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal amino acid absorption","synonyms":[{"name":"down regulation of renal amino acid absorption","type":"exact"},{"name":"down-regulation of renal amino acid absorption","type":"exact"},{"name":"downregulation of renal amino acid absorption","type":"exact"},{"name":"inhibition of renal amino acid absorption","type":"narrow"}],"termid":"GO:1902753"}


id: GO:0033305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"},{"relation_name":"is_a","term_name":"chlorophyll a metabolic process","termid":"GO:0033304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process","synonyms":[{"name":"chlorophyll a anabolism","type":"exact"},{"name":"chlorophyll a biosynthesis","type":"exact"},{"name":"chlorophyll a formation","type":"exact"},{"name":"chlorophyll a synthesis","type":"exact"}],"termid":"GO:0033305"}


id: PBO:0028679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_subtelomeric_heterochromatin","termid":"PBO:0028679"}


id: GO:0051255
data:
  {"annotated_genes":["SJAG_03073","SJAG_04841","SJAG_04745","SJAG_01215","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93436,95362,90918,104975,97563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051256"}]},"cv_name":"biological_process","definition":"The cell cycle process in which aggregation, arrangement and bonding together of a set of components to form the spindle midzone. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:ai","PMID:15296749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"spindle midzone assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle midzone biogenesis","type":"exact"},{"name":"spindle midzone biosynthesis","type":"exact"},{"name":"spindle midzone formation","type":"exact"}],"termid":"GO:0051255","terms_by_termid":{"GO:0051256":null}}


id: GO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cytokinin and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"cytokinin receptor activity","termid":"GO:0009884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled cytokinin receptor activity","synonyms":[{"name":"G protein coupled cytokinin receptor activity","type":"exact"},{"name":"G-protein coupled cytokinin receptor activity","type":"exact"},{"name":"cytokinin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0001647"}


id: GO:0043541
data:
  {"annotated_genes":["SJAG_04821","SJAG_00924","SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94484,94816,99700],"is_not":false,"summary":null,"term":"GO:0043541"}]},"cv_name":"cellular_component","definition":"A multienzyme, heterooligomeric complex involved in dolichyl-linked oligosaccharide synthesis. In yeast the complex is composed of Alg7p, which catalyzes the first step (GlcNAc1-PP-Dol from dolichol-phosphate and UDP-GlcNAc), and Alg13p plus Alg14p, the catalytic and anchoring subunits respectively, which together catalyze the second step (GlcNAc2-PP-dolichol from GlcNAc1-PP-Dol and UDP-GlcNAc) of dolichyl-linked oligosaccharide synthesis.","definition_xrefs":["GOC:rn","PMID:19129246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00924":null,"SJAG_03311":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005575","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043541","terms_by_termid":{"GO:0043541":null}}


id: GO:0098744
data:
  {"annotated_genes":["SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87370],"is_not":false,"summary":null,"term":"GO:0098744"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of 1-phosphatidylinositol 4-kinase.","definition_xrefs":["PMID:21288895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098744","terms_by_termid":{"GO:0098744":null}}


id: GO:0019079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved directly in viral genome replication, including viral nucleotide metabolism.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome replication","synonyms":[{"name":"sigma virus replication","type":"narrow"},{"name":"viral replication","type":"broad"}],"termid":"GO:0019079"}


id: PBO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 7","termid":"PBO:0071349"}


id: PBO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 5","termid":"PBO:0060761"}


id: PBO:0074716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 77","termid":"PBO:0074716"}


id: FYPO:0002856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000661","FYPO:0005447"],"is_obsolete":false,"name":"abnormal glutathione synthase activity","synonyms":[{"name":"abnormal GSH synthase activity","type":"exact"},{"name":"abnormal glutathione synthetase activity","type":"exact"}],"termid":"FYPO:0002856"}


id: GO:0010967
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107293],"is_not":false,"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010967","terms_by_termid":{"GO:0010967":null}}


id: GO:0090079
data:
  {"annotated_genes":["SJAG_02601","SJAG_05271","SJAG_03147","SJAG_04891","SJAG_02493","SJAG_00308","SJAG_01696","SJAG_03232","SJAG_03550","SJAG_02353","SJAG_03461","SJAG_03223","SJAG_02164","SJAG_03996","SJAG_00466","SJAG_02043","SJAG_02812","SJAG_02376","SJAG_02738","SJAG_02180","SJAG_04959","SJAG_01954","SJAG_02856","SJAG_05000","SJAG_04744","SJAG_05221","SJAG_01517","SJAG_02307","SJAG_03788","SJAG_01518","SJAG_02390","SJAG_01487","SJAG_02189","SJAG_05332","SJAG_03678","SJAG_04635","SJAG_02628","SJAG_01117","SJAG_00507","SJAG_04981","SJAG_01438","SJAG_03629","SJAG_00662","SJAG_01659","SJAG_01851","SJAG_01576","SJAG_03433","SJAG_05003","SJAG_04283","SJAG_00338","SJAG_04772","SJAG_03472","SJAG_04862","SJAG_04157","SJAG_02471","SJAG_02017","SJAG_02995","SJAG_00786","SJAG_01813","SJAG_04900","SJAG_03732","SJAG_01643"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000900"},{"annotations":[94841,108793,84765,98039,95582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008494"},{"annotations":[89749,94447,110846,115038,114571,108992,113068,115039,91271,94448,71678,99014,91272,107646,108270,105292,105291,108532,91489,108533,108534,114572,89750,89751,114573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003746"},{"annotations":[93878,95063,100873,86079,93383,101724,93938,96232,99349,106742,107460,93000,101432,94528,98758,92727,103430,101529,83717,92811,86117,90934,96630,101729,86534,106828,110108,103138,92017,101705,88912,100187,93958,111732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003743"},{"annotations":[103297,112156,94790,87252,98197,113599,92087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[94791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[87253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"},{"annotations":[100820,105294,91273,91274,105293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008079"}]},"cv_name":"molecular_function","definition":"Any selective and non-covalent interaction with a nucleic acid involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.","definition_xrefs":["GOC:dph","GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"},{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00786":null,"SJAG_01117":null,"SJAG_01438":null,"SJAG_01487":null,"SJAG_01517":null,"SJAG_01518":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01696":null,"SJAG_01813":null,"SJAG_01851":null,"SJAG_01954":null,"SJAG_02017":null,"SJAG_02043":null,"SJAG_02164":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02307":null,"SJAG_02353":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02493":null,"SJAG_02601":null,"SJAG_02628":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03232":null,"SJAG_03433":null,"SJAG_03461":null,"SJAG_03472":null,"SJAG_03550":null,"SJAG_03629":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03996":null,"SJAG_04157":null,"SJAG_04283":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04862":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04959":null,"SJAG_04981":null,"SJAG_05000":null,"SJAG_05003":null,"SJAG_05221":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0045182"],"is_obsolete":false,"name":"translation regulator activity, nucleic acid binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090079","terms_by_termid":{"GO:0000900":null,"GO:0003743":null,"GO:0003746":null,"GO:0003747":null,"GO:0008079":null,"GO:0008494":null,"GO:0016149":null,"GO:0016150":null}}


id: GO:1902012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(ribitol phosphate) teichoic acid.","definition_xrefs":["PMID:11882717","UniPathway:UPA00790","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"poly(ribitol phosphate) teichoic acid metabolic process","termid":"GO:1902011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0044281","GO:0071554"],"is_obsolete":false,"name":"poly(ribitol phosphate) teichoic acid biosynthetic process","synonyms":[{"name":"poly(ribitol phosphate) teichoic acid anabolism","type":"exact"},{"name":"poly(ribitol phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(ribitol phosphate) teichoic acid formation","type":"exact"},{"name":"poly(ribitol phosphate) teichoic acid synthesis","type":"exact"}],"termid":"GO:1902012"}


id: PBO:0049391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 4","termid":"PBO:0049391"}


id: FYPO:0007271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such regions containing transposons (Tf2 elements) are tethered to the centromere to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23084836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"increased Tf body tethering to centromere","synonyms":[{"name":"increased Tf body tethering to centromere during mitotic cell cycle","type":"related"},{"name":"increased Tf body tethering to centromere during vegetative growth","type":"exact"},{"name":"increased Tf2 body tethering to centromere","type":"exact"},{"name":"increased centromere tethering of Tf2 bodies","type":"exact"}],"termid":"FYPO:0007271"}


id: PBO:0071782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 10","termid":"PBO:0071782"}


id: PBO:0083383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CUP1-2","termid":"PBO:0083383"}


id: GO:0062210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regeneration process by which a damaged or lost shoot regrows or re-differentiates. This process may occur via de-differentiation and subsequent reprogramming of somatic cells or activation of existing undifferentiated (meristematic) cells to produce a new shoot meristem and subsequently a new shoot.","definition_xrefs":["PMID:27143753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot regeneration","synonyms":[{"name":"shoot system regeneration","type":"exact"}],"termid":"GO:0062210"}


id: GO:0034643
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98890],"is_not":false,"summary":null,"term":"GO:0034643"}]},"cv_name":"biological_process","definition":"The directed movement of the mitochondrion to a specific location, by a process involving microtubules.","definition_xrefs":["PMID:15979253","PMID:12972644","GOC:mah","PMID:16306220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of mitochondrion localization, microtubule-mediated","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of mitochondrion localisation, microtubule-mediated","type":"exact"},{"name":"microtubule-mediated mitochondrion localization","type":"exact"},{"name":"mitochondrial localization, microtubule-mediated","type":"exact"}],"termid":"GO:0034643","terms_by_termid":{"GO:0034643":null}}


id: GO:1990738
data:
  {"annotated_genes":["SJAG_04264","SJAG_05029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93884,109946],"is_not":false,"summary":null,"term":"GO:1990738"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pseudouridine 5'-phosphate + H2O = pseudouridine + phosphate.","definition_xrefs":["PMID:20722631","EC:3.1.3.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"pseudouridine 5'-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:10944"],"termid":"GO:1990738","terms_by_termid":{"GO:1990738":null}}


id: GO:0005949
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimeric enzyme composed of an alpha and beta subunit. Catalyzes the formation of L-2-aminoadipate from L-2-aminoadipate 6-semialdehyde.","definition_xrefs":["EC:1.2.1.31"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoadipate-semialdehyde dehydrogenase complex (obsolete GO:0005949)","synonyms":[{"name":"aminoadipate-semialdehyde dehydrogenase complex","type":"exact"}],"termid":"GO:0005949"}


id: PBO:0056608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 1","termid":"PBO:0056608"}


id: GO:0039541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of RIG-I (also known as DDX58) by binding to RIG-I itself.","definition_xrefs":["PMID:20007272","PMID:19193793","VZ:856"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I via RIG-I binding (obsolete GO:0039541)","synonyms":[{"name":"inhibition by virus of host DDX58:MAVS binding","type":"exact"}],"termid":"GO:0039541"}


id: GO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont involved in interaction with host (obsolete GO:0044148)","synonyms":[{"name":"positive regulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044148"}


id: GO:0008195
data:
  {"annotated_genes":["SJAG_02356","SJAG_00920","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87610,104119,106517],"is_not":false,"summary":null,"term":"GO:0008195"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate.","definition_xrefs":["RHEA:27429","GOC:pr","PMID:25814022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid phosphatase activity","termid":"GO:0042577"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00920":null,"SJAG_02356":null,"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6797630","Reactome:R-HSA-390329","Reactome:R-HSA-5221130","GO:0004606","Reactome:R-HSA-163688","Reactome:R-HSA-1483203","Reactome:R-HSA-75899","Reactome:R-HSA-2029468","EC:3.1.3.4","Reactome:R-HSA-164056","MetaCyc:PHOSPHATIDATE-PHOSPHATASE-RXN"],"synonyms":[{"name":"3-sn-phosphatidate phosphohydrolase activity","type":"related"},{"name":"acid phosphatidyl phosphatase activity","type":"related"},{"name":"phosphatic acid phosphatase activity","type":"related"},{"name":"phosphatic acid phosphohydrolase activity","type":"related"},{"name":"phosphatidate phosphohydrolase activity","type":"exact"},{"name":"phosphatidic acid phosphatase activity","type":"related"}],"termid":"GO:0008195","terms_by_termid":{"GO:0008195":null}}


id: PBO:0088814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF","termid":"PBO:0088814"}


id: PBO:0078203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-5","termid":"PBO:0078203"}


id: PBO:0089192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glutathione transmembrane transporter Pgt1","termid":"PBO:0089192"}


id: FYPO:0004838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane","synonyms":[{"name":"abnormal protein localisation to plasma membrane","type":"exact"},{"name":"abnormal protein localization in plasma membrane","type":"exact"},{"name":"abnormal protein localization to cell membrane","type":"exact"}],"termid":"FYPO:0004838"}


id: PBO:0013816
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TOP2","termid":"PBO:0013816"}


id: PBO:0068342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113B","termid":"PBO:0068342"}


id: GO:0097200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","Wikipedia:Caspase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0097153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"effector caspase activity","type":"narrow"},{"name":"executioner caspase activity","type":"narrow"}],"termid":"GO:0097200"}


id: GO:0034666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha2 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alpha2-beta1 complex","synonyms":[{"name":"ITGA2-ITGB1 complex","type":"narrow"},{"name":"VLA-2 complex","type":"exact"}],"termid":"GO:0034666"}


id: GO:0006362
data:
  {"annotated_genes":["SJAG_02653","SJAG_01128","SJAG_01562","SJAG_00139","SJAG_04106","SJAG_03144","SJAG_02070","SJAG_02871","SJAG_01948","SJAG_02101","SJAG_03956","SJAG_01313","SJAG_00731","SJAG_04261","SJAG_03578","SJAG_01698","SJAG_01765","SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83873,83874,85730,86551,88177,90053,91356,91891,98808,99472,100989,101903,105904,106807,109265,109639,109640,109928,110337,111639],"is_not":false,"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase I specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase I.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001183"],"synonyms":[{"name":"RNA elongation from Pol I promoter","type":"exact"},{"name":"RNA polymerase I transcription elongation factor activity","type":"related"},{"name":"transcription elongation from RNA polymerase I promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript","type":"related"}],"termid":"GO:0006362","terms_by_termid":{"GO:0006362":null}}


id: GO:1904866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ventral tegmental area (VTA) over time, from its formation to the mature structure.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:26548362","GOC:bf","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral tegmental area development","synonyms":[{"name":"VTA development","type":"broad"},{"name":"a10a development","type":"exact"},{"name":"area tegmentalis ventralis (Tsai) development","type":"related"},{"name":"area tegmentalis ventralis development","type":"related"},{"name":"tegmentum ventrale development","type":"related"},{"name":"ventral brain stem development","type":"related"},{"name":"ventral tegmental area (Tsai) development","type":"related"},{"name":"ventral tegmental area of tsai development","type":"exact"},{"name":"ventral tegmental nucleus (Rioch) development","type":"related"},{"name":"ventral tegmental nucleus (tsai) development","type":"exact"},{"name":"ventral tegmental nucleus of tsai development","type":"exact"},{"name":"ventral tegmentum development","type":"exact"},{"name":"ventromedial mesencephalic tegmentum development","type":"related"}],"termid":"GO:1904866"}


id: PBO:0079953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 6","termid":"PBO:0079953"}


id: PBO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 2","termid":"PBO:0080016"}


id: PBO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF in compositionally biased region","termid":"PBO:0000497"}


id: PBO:0057781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2861","termid":"PBO:0057781"}


id: PBO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151A pseudogene 1","termid":"PBO:0047099"}


id: GO:0102648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 6-phosphate + D-ribose 5-phosphate = D-glycero-D-altro-octulose 8-phosphate + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:2.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0016744","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-ribose 5-phosphate:D-fructose 6-phosphate transaldolase activity","secondary_identifiers":["MetaCyc:RXN-15790"],"termid":"GO:0102648"}


id: PBO:0068931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 174, pseudogene","termid":"PBO:0068931"}


id: GO:1902707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to ethanol.","definition_xrefs":["PMID:18727018","PMID:19539744","GOC:mengo_curators","GO_REF:0000093","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to ethanol (obsolete GO:1902707)","synonyms":[{"name":"hexose breakdown to ethanol","type":"exact"},{"name":"hexose catabolism to ethanol","type":"exact"},{"name":"hexose degradation to ethanol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902707"}


id: PBO:0004042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tor complex Tor2 interacting protein 1","termid":"PBO:0004042"}


id: PBO:0079824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 3","termid":"PBO:0079824"}


id: PBO:0038287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charge_at_ph7","termid":"PBO:0038287"}


id: GO:0008904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + hygromycin B = 7''-O-phosphohygromycin B + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.119","RHEA:23388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"hygromycin-B 7''-O-phosphotransferase activity","secondary_identifiers":["MetaCyc:HYGROMYCIN-B-KINASE-RXN","KEGG_REACTION:R03770"],"synonyms":[{"name":"APH(7'') activity","type":"related"},{"name":"ATP:hygromycin-B 7''-O-phosphotransferase activity","type":"related"},{"name":"destomic acid ring 7''-O-phosphotransferase activity","type":"exact"},{"name":"hygromycin B kinase activity","type":"broad"},{"name":"hygromycin B phosphotransferase activity","type":"broad"},{"name":"hygromycin-B kinase activity","type":"broad"}],"termid":"GO:0008904"}


id: PBO:0061519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 2","termid":"PBO:0061519"}


id: PBO:0029412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_checkpoint_signaling","termid":"PBO:0029412"}


id: PBO:0031435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation","termid":"PBO:0031435"}


id: PBO:0035897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_acetylation_during_vegetative_growth","termid":"PBO:0035897"}


id: PBO:0081364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 200","termid":"PBO:0081364"}


id: PBO:0030490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_succinate_import","termid":"PBO:0030490"}


id: GO:0072147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular parietal epithelial cell. Glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. These cells may also give rise to podocytes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular parietal epithelial cell fate commitment","synonyms":[{"name":"Bowman's capsule cell fate commitment","type":"exact"}],"termid":"GO:0072147"}


id: PR:O43083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip4 gene.","definition_xrefs":["UniProtKB:O43083","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone promoter control protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.08c","synonyms":[{"name":"Spom972h-hip4","type":"exact"}],"termid":"PR:O43083"}


id: GO:0046148
data:
  {"annotated_genes":["SJAG_01192","SJAG_02876","SJAG_01155","SJAG_00097","SJAG_01841","SJAG_03173","SJAG_03961","SJAG_05283","SJAG_02896","SJAG_04944","SJAG_01372","SJAG_04397","SJAG_03862","SJAG_04109","SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105655,89325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[101298,91921,110003,112758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[87130,88984,90580,91922,113093,92514,88484,66671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[93941,111546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pigment anabolism","type":"exact"},{"name":"pigment biosynthesis","type":"exact"},{"name":"pigment formation","type":"exact"},{"name":"pigment synthesis","type":"exact"}],"termid":"GO:0046148","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: PBO:0080819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xyloside xylosyltransferase 1","termid":"PBO:0080819"}


id: PBO:0089558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanosine 34-2'-O)-methyltransferase regulator Trm734","termid":"PBO:0089558"}


id: PBO:0085919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085919"}


id: PBO:0108548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin adaptor End4","termid":"PBO:0108548"}


id: PBO:0083560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene RNP1","termid":"PBO:0083560"}


id: PBO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (predicted)","termid":"PBO:0002198"}


id: GO:0035849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nephric duct grows along its axis. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","PMID:16216236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct elongation","termid":"GO:0035849"}


id: PBO:0067688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 5","termid":"PBO:0067688"}


id: PBO:0072819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD12 antisense RNA 1","termid":"PBO:0072819"}


id: GO:0032083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of type IV restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032073"},{"relation_name":"is_a","term_name":"regulation of type IV site-specific deoxyribonuclease activity","termid":"GO:0032087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV site-specific deoxyribonuclease activity","synonyms":[{"name":"down regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type IV restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type IV restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type IV restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032083"}


id: PBO:0046556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 10, envelope","termid":"PBO:0046556"}


id: GO:1990732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle found within the chloroplasts of algae and hornworts; responsible for carbon dioxide fixation.","definition_xrefs":["GOC:cjm","GOC:pr","Wikipedia:Pyrenoid","PMID:23345319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pyrenoid","termid":"GO:1990732"}


id: SO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV is a multiple nucleotide variant (substitution) in which the inserted sequence is the same length as the replaced sequence.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV","synonyms":[{"name":"multiple nucleotide substitution","type":"exact"},{"name":"multiple nucleotide variant","type":"exact"}],"termid":"SO:0002007"}


id: PR:O94724
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1393.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.12","synonyms":[{"name":"Spom972h-SPCC1393.12","type":"exact"}],"termid":"PR:O94724"}


id: PBO:0004391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1","termid":"PBO:0004391"}


id: GO:1990612
data:
  {"annotated_genes":["SJAG_01538","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92858,98944],"is_not":false,"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair.","definition_xrefs":["GOC:vw","PMID:24947240","PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane microtubule tethering complex","termid":"GO:0034993"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Sad1-Kms1 LINC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990612","terms_by_termid":{"GO:1990612":null}}


id: PBO:0075764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 3","termid":"PBO:0075764"}


id: FYPO:0003727
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115483],"is_not":false,"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein in the cell wall does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:9125114","PMID:11378902","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"},{"relation_name":"is_a","term_name":"galactose absent from glycoprotein glycan","termid":"FYPO:0003291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0003290","FYPO:0002494","FYPO:0002946"],"is_obsolete":false,"name":"galactose absent from cell wall glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abolished galactosylation of cell surface proteins","type":"related"},{"name":"alpha 1,2-linked galactose residues absent from cell wall glycoprotein","type":"exact"},{"name":"galactose absent from cell wall glycoprotein oligosaccharide","type":"related"},{"name":"galactose absent from glycoprotein glycan in cell wall","type":"exact"}],"termid":"FYPO:0003727","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:1904632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucoside stimulus.","definition_xrefs":["PMID:16842873","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glucoside","termid":"GO:1904631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucoside","synonyms":[{"name":"cellular response to glucosides","type":"exact"}],"termid":"GO:1904632"}


id: GO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009183"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dADP biosynthetic process","synonyms":[{"name":"dADP anabolism","type":"exact"},{"name":"dADP biosynthesis","type":"exact"},{"name":"dADP formation","type":"exact"},{"name":"dADP synthesis","type":"exact"}],"termid":"GO:0006173"}


id: PBO:0041230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 52","termid":"PBO:0041230"}


id: GO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of cysteine within a cell.","definition_xrefs":["PMID:19955263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular cysteine homeostasis","synonyms":[{"name":"cellular cysteine homeostasis","type":"exact"},{"name":"cysteine homeostasis","type":"exact"}],"termid":"GO:0080145"}


id: GO:0038062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with collagen and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["PMID:16626936","PMID:21568710","GOC:bf","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"},{"relation_name":"is_a","term_name":"collagen receptor activity","termid":"GO:0038064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0038023","GO:0003824","GO:0004672","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"protein tyrosine kinase collagen receptor activity","synonyms":[{"name":"collagen RTK activity","type":"exact"},{"name":"discoidin domain receptor","type":"related"}],"termid":"GO:0038062"}


id: PBO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11 (predicted)","termid":"PBO:0001187"}


id: FYPO:0004152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pyridoxal measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular pyridoxal level","synonyms":[{"name":"increased cellular pyridoxal level during mitotic cell cycle","type":"related"},{"name":"increased cellular pyridoxal level during vegetative growth","type":"exact"},{"name":"increased pyridoxal accumulation","type":"related"}],"termid":"FYPO:0004152"}


id: PBO:0028017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_farnesyltransferase_activity","termid":"PBO:0028017"}


id: PBO:0078869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 3","termid":"PBO:0078869"}


id: PBO:0025548
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarase deficiency","termid":"PBO:0025548"}


id: GO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"'de novo' NAD biosynthetic process","termid":"GO:0034627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process from aspartate","secondary_identifiers":["GO:0019355"],"synonyms":[{"name":"de novo NAD biosynthetic process from aspartate","type":"related"},{"name":"nicotinamide nucleotide anabolism from aspartate","type":"exact"},{"name":"nicotinamide nucleotide biosynthetic process from aspartate","type":"exact"},{"name":"nicotinamide nucleotide formation from aspartate","type":"exact"},{"name":"nicotinamide nucleotide synthesis from aspartate","type":"exact"}],"termid":"GO:0034628"}


id: PBO:0083445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ALA1/YOR335C","termid":"PBO:0083445"}


id: PBO:0074496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 25","termid":"PBO:0074496"}


id: PBO:0041338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 22","termid":"PBO:0041338"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: GO:0160066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SIN signaling complex associated with the old mitotic spindle pole body during interphase and early M-phase and characterised by the presence active ubiquitin ligase (Dma1 in fission yeast) and GTPase activator (Spg1 in fission yeast) to inactivate SIN signaling.","definition_xrefs":["PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SIN/MEN signaling complex","termid":"GO:0160065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interphase SIN signaling complex","synonyms":[{"name":"interphase SIN signalling complex","type":"exact"}],"termid":"GO:0160066"}


id: PBO:0064170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVF","termid":"PBO:0064170"}


id: GO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of inflorescences are generated and organized. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence morphogenesis","termid":"GO:0048281"}


id: PBO:0030474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glutamate_level","termid":"PBO:0030474"}


id: PATO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Auxotrophic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophic quality","termid":"PATO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxotrophic","termid":"PATO:0000422"}


id: MOD:00538
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115661,115658,115659,115412,115660,115413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Modified amino acid residues groups into isobaric sets at particular mass resolution cut-offs.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by isobaric sets","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"termid":"MOD:00538","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: FYPO:0005205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased DNA polymerase processivity factor activity","termid":"FYPO:0005205"}


id: FYPO:0008166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome does not occur during prometaphase of mitosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008166"}


id: PBO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin","termid":"PBO:0044226"}


id: GO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin D receptor activity","synonyms":[{"name":"PGD receptor activity","type":"related"},{"name":"PGD(2) receptor activity","type":"exact"}],"termid":"GO:0004956"}


id: PBO:0051333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-29","termid":"PBO:0051333"}


id: GO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of norepinephrine secretion","synonyms":[{"name":"regulation of noradrenaline secretion","type":"exact"}],"termid":"GO:0014061"}


id: PBO:0052400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 1","termid":"PBO:0052400"}


id: GO:0075064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation invasive hypha growth (obsolete GO:0075064)","synonyms":[{"name":"negative regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"negative regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075064"}


id: PBO:0070980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 4","termid":"PBO:0070980"}


id: PBO:0061991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily C member 1","termid":"PBO:0061991"}


id: GO:0061094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of turning behavior involved in mating. Turning behavior is the sharp ventral turn performed by the male as he approaches either the hermaphrodite head or tail, whilst trying to locate his partner's vulva. Turning occurs via a sharp ventral coil of the male's tail.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of male mating behavior","termid":"GO:1902435"},{"relation_name":"regulates","term_name":"turning behavior involved in mating","termid":"GO:0034607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of turning behavior involved in mating","termid":"GO:0061094"}


id: GO:0033381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the protease granzyme B to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protease localization to T cell secretory granule","termid":"GO:0033378"},{"relation_name":"part_of","term_name":"granzyme B localization to T cell secretory granule","termid":"GO:0033380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of granzyme B localization to T cell secretory granule","synonyms":[{"name":"T-lymphocyte secretory granule storage of granzyme B","type":"related"},{"name":"establishment of granzyme B localisation in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033381"}


id: PATO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of color.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of color","termid":"PATO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant color","termid":"PATO:0001614"}


id: GO:0031031
data:
  {"annotated_genes":["SJAG_00082","SJAG_03048","SJAG_03936","SJAG_01805","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83727,86174,89953,98515,106648],"is_not":false,"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of septation initiation signaling","termid":"GO:0031029"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of septation initiation signaling","type":"narrow"},{"name":"positive regulation of septation initiation network","type":"exact"},{"name":"positive regulation of septation initiation signaling cascade","type":"related"},{"name":"positive regulation of septation initiation signalling","type":"exact"},{"name":"stimulation of septation initiation signaling","type":"narrow"},{"name":"up regulation of septation initiation signaling","type":"exact"},{"name":"up-regulation of septation initiation signaling","type":"exact"},{"name":"upregulation of septation initiation signaling","type":"exact"}],"termid":"GO:0031031","terms_by_termid":{"GO:0031031":null}}


id: GO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + ATP = phosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["EC:2.7.7.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP:ADP adenylyltransferase activity","secondary_identifiers":["MetaCyc:ATP-ADENYLYLTRANSFERASE-RXN","RHEA:16577"],"synonyms":[{"name":"AP-4-A phosphorylase activity","type":"related"},{"name":"ATP adenylyltransferase activity","type":"broad"},{"name":"adenine triphosphate adenylyltransferase activity","type":"related"},{"name":"bis(5'-nucleosyl)-tetraphosphate phosphorylase (NDP-forming) activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate alphabeta-phosphorylase (ADP-forming)","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alpha-beta-phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alphabeta-phosphorylase activity","type":"related"},{"name":"dinucleoside oligophosphate alphabeta-phosphorylase activity","type":"related"}],"termid":"GO:0003877"}


id: PBO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF4-CCPG1 readthrough (NMD candidate)","termid":"PBO:0045136"}


id: PR:Q10335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02451","PANTHER:PTHR14145:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.07c","secondary_identifiers":["UniProtKB:Q10335"],"synonyms":[{"name":"Spom972h-PSMD6","type":"exact"}],"termid":"PR:Q10335"}


id: GO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the distal convoluted tubule cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DCT cell differentiation","synonyms":[{"name":"distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:0072069"}


id: GO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotene catabolic process","synonyms":[{"name":"carotene breakdown","type":"exact"},{"name":"carotene catabolism","type":"exact"},{"name":"carotene degradation","type":"exact"}],"termid":"GO:0016121"}


id: FYPO:0004143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of nitrite (NO2-) ions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular nitrite level","synonyms":[{"name":"increased cellular nitrite accumulation","type":"related"},{"name":"increased cellular nitrite ion level","type":"exact"},{"name":"increased cellular nitrite level during mitotic cell cycle","type":"related"},{"name":"increased cellular nitrite level during vegetative growth","type":"exact"}],"termid":"FYPO:0004143"}


id: GO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid -> 2-hexaprenyl-6-methoxyphenol + CO2.","definition_xrefs":["GOC:mw","PMID:620805","PMID:7028108","KEGG_REACTION:R06866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid decarboxylase activity","secondary_identifiers":["RHEA:44768"],"termid":"GO:0036163"}


id: GO:0007526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larval somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval somatic muscle development","termid":"GO:0007526"}


id: SO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_with_retained_intron","synonyms":[{"name":"lncRNA with retained intron","type":"exact"},{"name":"lncRNA_retained_intron","type":"exact"}],"termid":"SO:0002113"}


id: PBO:0043952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B3","termid":"PBO:0043952"}


id: PBO:0049109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 166 pseudogene","termid":"PBO:0049109"}


id: PBO:0067477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 608, pseudogene","termid":"PBO:0067477"}


id: PBO:0085549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14B has a paralog, RPS14A, that arose from the whole genome duplication","termid":"PBO:0085549"}


id: GO:0035273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phthalate, any ester or salt of phthalic acid.","definition_xrefs":["PMID:31116073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phthalate binding","termid":"GO:0035273"}


id: GO:0071406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methylmercury","termid":"GO:0051597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methylmercury","synonyms":[{"name":"cellular response to CH3-Hg+","type":"exact"},{"name":"cellular response to MeHg+","type":"exact"}],"termid":"GO:0071406"}


id: PR:Q10341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cys2 gene.","definition_xrefs":["UniProtKB:Q10341","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-O-acetyltransferase cys2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.17c","synonyms":[{"name":"Spom972h-cys2","type":"exact"}],"termid":"PR:Q10341"}


id: GO:0140635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a neutrophil away from the site of wound or infection following its initial migration to the site.","definition_xrefs":["PMID:31727891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil dispersal","termid":"GO:0140635"}


id: PBO:0082972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation","termid":"PBO:0082972"}


id: PBO:0071192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 33","termid":"PBO:0071192"}


id: PBO:0064755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 91","termid":"PBO:0064755"}


id: PBO:0030862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_medial_cortex_in_spores","termid":"PBO:0030862"}


id: PBO:0026804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026804"}


id: GO:0006027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan catabolic process","termid":"GO:0006026"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan catabolic process","synonyms":[{"name":"glycosaminoglycan breakdown","type":"exact"},{"name":"glycosaminoglycan catabolism","type":"exact"},{"name":"glycosaminoglycan degradation","type":"exact"}],"termid":"GO:0006027"}


id: PBO:0026650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0026650"}


id: PBO:0067468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 597, pseudogene","termid":"PBO:0067468"}


id: PBO:0039691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APCDD1L divergent transcript","termid":"PBO:0039691"}


id: PBO:0070269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 3","termid":"PBO:0070269"}


id: GO:1990901
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell pole distal from the most recent cell division.","definition_xrefs":["GOC:jh2","PMID:8226658","PMID:10231492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"old cell pole","termid":"GO:1990901"}


id: GO:0006407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rRNA from the nucleus to the cytoplasm; the rRNA is usually in the form of ribonucleoproteins.","definition_xrefs":["GOC:mah","GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete rRNA export from nucleus (obsolete GO:0006407)","synonyms":[{"name":"rRNA export from cell nucleus","type":"exact"},{"name":"rRNA export out of nucleus","type":"exact"},{"name":"rRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"rRNA-nucleus export","type":"exact"}],"termid":"GO:0006407"}


id: MOD:00306
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 113.084064 Da.","definition_xrefs":["RESID:AA0301","PubMed:10523135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.084064 Da","synonyms":[{"name":"L-isoleucine or L-leucine","type":"exact"},{"name":"Xle","type":"exact"}],"termid":"MOD:00306"}


id: GO:0043573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of two or more leucoplasts by division of one leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid fission","termid":"GO:0043572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast fission","termid":"GO:0043573"}


id: PBO:0004044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad60","termid":"PBO:0004044"}


id: GO:1901801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,5-anhydro-D-fructose.","definition_xrefs":["GOC:yaf","GOC:TermGenie","MetaCyc:PWY-6992","PMID:15716041","UniPathway:UPA00738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose metabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose metabolism","type":"exact"}],"termid":"GO:1901801"}


id: FYPO:0004460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of mitotic cell cycle RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Regulation of mitotic cell cycle RNAs are transcribed from genes whose products are involved in regulation of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of mitotic cell cycle regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased regulation of mitotic cell cycle gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004460"}


id: GO:0043292
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:go_curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"contractile muscle fiber","synonyms":[{"name":"contractile fibre","type":"exact"}],"termid":"GO:0043292"}


id: GO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microspike, a dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:19095735","PMID:12153987","PMID:11429692","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microspike assembly","synonyms":[{"name":"microspike biogenesis","type":"related"},{"name":"microspike biosynthesis","type":"exact"},{"name":"microspike formation","type":"exact"}],"termid":"GO:0030035"}


id: PBO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual serine/threonine and tyrosine protein kinase","termid":"PBO:0045514"}


id: PBO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gypsy retrotransposon integrase 1","termid":"PBO:0048618"}


id: PBO:0004861
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.15","termid":"PBO:0004861"}


id: PR:Q10137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo20 gene.","definition_xrefs":["UniProtKB:Q10137","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.10","synonyms":[{"name":"PI/PC TP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo20","type":"exact"},{"name":"phosphatidylinositol/phosphatidyl-choline transfer protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation-specific protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10137"}


id: GO:0039518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host cytokine activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cytokine activity (obsolete GO:0039518)","synonyms":[{"name":"down-regulation by virus of host cytokine activity","type":"exact"},{"name":"downregulation by virus of host cytokine activity","type":"exact"},{"name":"inhibition by virus of host cytokine activity","type":"narrow"},{"name":"negative regulation by virus of host cytokine activity","type":"exact"}],"termid":"GO:0039518"}


id: PBO:0067009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 16, pseudogene","termid":"PBO:0067009"}


id: PBO:0087994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase; required for de novo biosynthesis of NAD+ from tryptophan via kynurenine; up-regulated by telomere uncapping, and interacts genetically with capping gene CDC13; overexpression reduces lipid droplet accumulation by skewing glycolytic flux towards biosynthesis of shikimate, aromatic amino acids, and NAD+ during aging and extends lifespan; regulated by Hst1p and Aftp","termid":"PBO:0087994"}


id: GO:0016627
data:
  {"annotated_genes":["SJAG_00197","SJAG_04652","SJAG_01041","SJAG_02876","SJAG_01362","SJAG_03236","SJAG_02007","SJAG_00203","SJAG_03024","SJAG_02151","SJAG_04944","SJAG_01786","SJAG_04107","SJAG_04810","SJAG_00260","SJAG_02291","SJAG_01671","SJAG_04954","SJAG_02717","SJAG_00174","SJAG_03240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96136,96791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"},{"annotations":[88985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[100579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050613"},{"annotations":[88683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000246"},{"annotations":[94640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[94641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004152"},{"annotations":[96871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[91155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"},{"annotations":[86343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[114508,100805,105762,85633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106414"},{"annotations":[97709,97710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016628"},{"annotations":[88485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"},{"annotations":[60922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102389"},{"annotations":[93943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043115"},{"annotations":[110929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008977"},{"annotations":[110930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004665"},{"annotations":[85008,85366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"},{"annotations":[107443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019166"},{"annotations":[105763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[105764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[100806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[114509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[114510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00197":null,"SJAG_00203":null,"SJAG_00260":null,"SJAG_01041":null,"SJAG_01362":null,"SJAG_01671":null,"SJAG_01786":null,"SJAG_02007":null,"SJAG_02151":null,"SJAG_02291":null,"SJAG_02717":null,"SJAG_02876":null,"SJAG_03024":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_04107":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_04944":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9661710","Reactome:R-HSA-2995334"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016627","terms_by_termid":{"GO:0000246":null,"GO:0003865":null,"GO:0004109":null,"GO:0004152":null,"GO:0004318":null,"GO:0004665":null,"GO:0004729":null,"GO:0008177":null,"GO:0008977":null,"GO:0016156":null,"GO:0016628":null,"GO:0019166":null,"GO:0043115":null,"GO:0050613":null,"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0102389":null,"GO:0106414":null,"GO:0106430":null,"GO:0141148":null}}


id: PBO:0071189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 30","termid":"PBO:0071189"}


id: PATO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A perimeter which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased length","termid":"PATO:0000574"},{"relation_name":"is_a","term_name":"perimeter","termid":"PATO:0001711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased perimeter","termid":"PATO:0001713"}


id: PBO:0063747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 12","termid":"PBO:0063747"}


id: PBO:0066475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 2","termid":"PBO:0066475"}


id: GO:0004022
data:
  {"annotated_genes":["SJAG_03196","SJAG_03370","SJAG_01869","SJAG_03822","SJAG_00240","SJAG_01457","SJAG_01986","SJAG_01414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70236,94861,94862,101162,110734,110735],"is_not":false,"summary":null,"term":"GO:0004022"},{"annotations":[94863,99609,94864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004024"},{"annotations":[87958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+.","definition_xrefs":["EC:1.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_01457":null,"SJAG_01869":null,"SJAG_01986":null,"SJAG_03196":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alcohol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2162078","MetaCyc:ALCOHOL-DEHYDROG-GENERIC-RXN","RHEA:10740","UM-BBD_enzymeID:e0023"],"synonyms":[{"name":"ADH","type":"related"},{"name":"NAD-dependent alcohol dehydrogenase","type":"related"},{"name":"NAD-specific aromatic alcohol dehydrogenase","type":"related"},{"name":"NADH-alcohol dehydrogenase","type":"related"},{"name":"NADH-aldehyde dehydrogenase","type":"related"},{"name":"alcohol dehydrogenase activity","type":"broad"},{"name":"alcohol:NAD+ oxidoreductase","type":"related"},{"name":"aldehyde dehydrogenase (NAD) activity","type":"narrow"},{"name":"aldo-keto reductase (NAD) activity","type":"exact"},{"name":"aliphatic alcohol dehydrogenase","type":"narrow"},{"name":"ethanol dehydrogenase","type":"narrow"},{"name":"primary alcohol dehydrogenase","type":"broad"},{"name":"yeast alcohol dehydrogenase","type":"narrow"}],"termid":"GO:0004022","terms_by_termid":{"GO:0004022":null,"GO:0004024":null,"GO:0047018":null}}


id: GO:0032826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"regulation of NK cell differentiation during immune response","type":"related"},{"name":"regulation of natural killer cell development involved in immune response","type":"related"},{"name":"regulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032826"}


id: GO:0100046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates arginine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of arginine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100046)","termid":"GO:0100046"}


id: PBO:0003702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II large subunit Rpb1","termid":"PBO:0003702"}


id: PBO:0111441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein","termid":"PBO:0111441"}


id: GO:0006307
data:
  {"annotated_genes":["SJAG_03106","SJAG_01971","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73627,97698,99743],"is_not":false,"summary":null,"term":"GO:0006307"}]},"cv_name":"biological_process","definition":"The repair of alkylation damage in DNA, e.g. the removal of a non-physiological alkyl group from a nucleobase. This is usually mediated by DNA alkyltransferases.","definition_xrefs":["PMID:10946226","PMID:35543797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_03106":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"DNA alkylation repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA dealkylation involved in DNA repair","type":"related"}],"termid":"GO:0006307","terms_by_termid":{"GO:0006307":null}}


id: GO:0038076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in innate immune response (obsolete GO:0038076)","synonyms":[{"name":"MAP2K activity involved in innate immune response","type":"exact"},{"name":"MAPKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038076"}


id: PBO:0058653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6781","termid":"PBO:0058653"}


id: GO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of inclusion body assembly","termid":"GO:0090083"},{"relation_name":"positively_regulates","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inclusion body assembly","termid":"GO:0090261"}


id: GO:0043647
data:
  {"annotated_genes":["SJAG_01970","SJAG_01702","SJAG_00321","SJAG_01154","SJAG_02321","SJAG_04067","SJAG_03409","SJAG_01148","SJAG_04870","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67274,103023,103024,111164],"is_not":false,"summary":null,"term":"GO:0043647"},{"annotations":[101301,84905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[114902,113117,111162,89519,94930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[84906,111163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02321":null,"SJAG_03409":null,"SJAG_04067":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol phosphate metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"inositol phosphate metabolism","type":"exact"},{"name":"myo-inositol phosphate metabolic process","type":"narrow"},{"name":"myo-inositol phosphate metabolism","type":"narrow"}],"termid":"GO:0043647","terms_by_termid":{"GO:0032958":null,"GO:0043647":null,"GO:0071543":null,"GO:0071545":null}}


id: PBO:0027908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_telomere_during_meiosis","termid":"PBO:0027908"}


id: GO:1905598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of low-density lipoprotein receptor activity.","definition_xrefs":["GOC:nc","GOC:BHF","GO_REF:0000059","GOC:TermGenie","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"negative regulation of receptor-mediated endocytosis","termid":"GO:0048261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of low-density lipoprotein receptor activity","synonyms":[{"name":"down regulation of LDL receptor","type":"exact"},{"name":"down regulation of LDLR activity","type":"exact"},{"name":"down regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"down-regulation of LDL receptor","type":"exact"},{"name":"down-regulation of LDLR activity","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"downregulation of LDL receptor","type":"exact"},{"name":"downregulation of LDLR activity","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"inhibition of LDL receptor","type":"narrow"},{"name":"inhibition of LDLR activity","type":"narrow"},{"name":"inhibition of low-density lipoprotein receptor activity","type":"narrow"},{"name":"negative regulation of LDL receptor","type":"exact"},{"name":"negative regulation of LDLR activity","type":"exact"}],"termid":"GO:1905598"}


id: PBO:0068836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 74, pseudogene","termid":"PBO:0068836"}


id: GO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-methionine from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid secondary active transmembrane transporter activity","termid":"GO:0005294"},{"relation_name":"is_a","term_name":"L-methionine transmembrane transporter activity","termid":"GO:0015191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-methionine secondary active transmembrane transporter activity","synonyms":[{"name":"L-methionine porter activity","type":"related"}],"termid":"GO:0000102"}


id: GO:0060831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the dorsal/ventral pattern of the neural tube.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"dorsal/ventral neural tube patterning","termid":"GO:0021904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:0060831"}


id: PBO:0085489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proline oxidase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source","termid":"PBO:0085489"}


id: GO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell apoptotic process that occurs upon engagement of either the B cell receptor or CD40. Engagement of either receptor, but not both, leads to expression of fas or related receptors that make the B cell susceptible to fas-ligand mediated death.","definition_xrefs":["PMID:19300454","PMID:11032170","GOC:tfm","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation-induced B cell apoptotic process","synonyms":[{"name":"AICD","type":"broad"},{"name":"activated B cell apoptosis","type":"broad"},{"name":"activation-induced B cell apoptosis","type":"narrow"},{"name":"activation-induced B-cell apoptosis","type":"exact"},{"name":"activation-induced cell death of B cells","type":"exact"},{"name":"activation-induced cell death of B lymphocytes","type":"exact"},{"name":"activation-induced cell death of B-cells","type":"exact"},{"name":"activation-induced cell death of B-lymphocytes","type":"exact"},{"name":"antigen-driven apoptosis","type":"broad"}],"termid":"GO:0071948"}


id: PBO:0013044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl2","termid":"PBO:0013044"}


id: GO:2000893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellotriose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellotriose metabolic process","synonyms":[{"name":"cellotriose metabolism","type":"exact"}],"termid":"GO:2000893"}


id: PR:Q9P7W6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA mismatch repair protein Mlh1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.04","secondary_identifiers":["UniProtKB:Q9P7W6"],"synonyms":[{"name":"DNA mismatch repair protein MLH1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MLH1","type":"exact"}],"termid":"PR:Q9P7W6"}


id: PBO:0048380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 4","termid":"PBO:0048380"}


id: PBO:0061305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPEPPS pseudogene 2","termid":"PBO:0061305"}


id: PBO:0049057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 62","termid":"PBO:0049057"}


id: PBO:0059125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple PDZ domain crumbs cell polarity complex component","termid":"PBO:0059125"}


id: FYPO:0001911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein glycosylation during vegetative growth","synonyms":[{"name":"decreased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hypoglycosylation during vegetative growth","type":"exact"},{"name":"reduced protein glycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001911"}


id: PBO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 2","termid":"PBO:0005865"}


id: _global:during_which_starts
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_starts","secondary_identifiers":["RO:0002088"],"termid":"_global:during_which_starts"}


id: GO:0009832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellulose and pectin-containing cell wall. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"is_a","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"plant-type cell wall biogenesis","synonyms":[{"name":"cell wall anabolism","type":"broad"},{"name":"cell wall assembly","type":"broad"},{"name":"cell wall biosynthetic process","type":"broad"},{"name":"cell wall formation","type":"broad"},{"name":"cell wall synthesis","type":"broad"},{"name":"cellulose and pectin-containing cell wall biogenesis","type":"exact"}],"termid":"GO:0009832"}


id: PBO:0046451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-prolyl-tRNA synthetase 1","termid":"PBO:0046451"}


id: PBO:0069805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1091, pseudogene","termid":"PBO:0069805"}


id: GO:0150063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the visual system over time, from its formation to the mature structure, including the eye, parts of the central nervous system (CNS) involved in processing of visual inputs, and connecting nerve pathways.","definition_xrefs":["GOC:bc","PMID:20647017","PMID:22632727","GOC:aruk","GOC:krc","PMID:15004427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system development","termid":"GO:0048880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual system development","synonyms":[{"name":"optic pathway development","type":"related"},{"name":"visual pathway development","type":"related"}],"termid":"GO:0150063"}


id: PBO:0071477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 18","termid":"PBO:0071477"}


id: GO:0099182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intermediate filament cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic intermediate filament cytoskeleton","termid":"GO:0099182"}


id: PBO:0056325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K7 C-terminal like","termid":"PBO:0056325"}


id: PBO:0079984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 22","termid":"PBO:0079984"}


id: PBO:0089859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase Hem14","termid":"PBO:0089859"}


id: GO:1900175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900175)","synonyms":[{"name":"regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900175"}


id: SO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_tag","synonyms":[{"name":"engineered tag","type":"exact"}],"termid":"SO:0000807"}


id: GO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21781281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of voltage-gated sodium channel activity in another organism","termid":"GO:0044488"},{"relation_name":"is_a","term_name":"positive regulation of molecular function in another organism","termid":"GO:0044491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"positive regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044490"}


id: PBO:0016067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring myosin V regulator Rng8","termid":"PBO:0016067"}


id: SO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated by genomic contamination.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_genomic_contamination","termid":"SO:0000414"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_contaminated_cDNA_clone","synonyms":[{"name":"genomically contaminated cDNA clone","type":"exact"}],"termid":"SO:0000811"}


id: _global:results_in_developmental_progression_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p results in the developmental progression of s iff p is a developmental process and s is an anatomical structure and p causes s to undergo a change in state at some point along its natural developmental cycle (this cycle starts with its formation, through the mature structure, and ends with its loss).","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"},{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"_global:developmentally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_developmental_progression_of","secondary_identifiers":["RO:0002295"],"termid":"_global:results_in_developmental_progression_of"}


id: GO:2000889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellodextrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellodextrin metabolic process","synonyms":[{"name":"cellodextrin metabolism","type":"exact"}],"termid":"GO:2000889"}


id: PBO:0062090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 40 pseudogene","termid":"PBO:0062090"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: PBO:0013802
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MET17","termid":"PBO:0013802"}


id: PATO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the anterior-posterior axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior polarity","synonyms":[{"name":"rostral-caudal polarity ","type":"exact"},{"name":"superior-caudal polarity (human torso)","type":"exact"}],"termid":"PATO:0002024"}


id: GO:0042466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response by a motile cell to a soluble chemical that involves an increase or decrease in speed (positive or negative orthokinesis) or of frequency of movement or a change in the frequency or magnitude of turning behavior (klinokinesis).","definition_xrefs":["PMID:2073411","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesis","termid":"GO:0042465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemokinesis","secondary_identifiers":["Wikipedia:Chemokinesis"],"termid":"GO:0042466"}


id: PR:Q10340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC106.19 gene.","definition_xrefs":["UniProtKB:Q10340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C106.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.19","synonyms":[{"name":"Spom972h-SPBC106.19","type":"exact"}],"termid":"PR:Q10340"}


id: FYPO:0002376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"decreased phosphorylation during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002376"}


id: PBO:0091128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Smp3","termid":"PBO:0091128"}


id: PBO:0051189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-7 (pseudogene)","termid":"PBO:0051189"}


id: PBO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_chromosomal_homology_relationship_with","termid":"PBO:0034159"}


id: GO:0036001
data:
  {"annotated_genes":["SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88957],"is_not":false,"summary":null,"term":"GO:0036001"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal 5'-phosphate, the active form of vitamin B6, from simpler components.","definition_xrefs":["GOC:bf","MetaCyc:PYRIDOXSYN-PWY","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"'de novo' pyridoxal 5'-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' PLP biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate anabolism","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate formation","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate synthesis","type":"exact"},{"name":"'de novo' pyridoxal phosphate biosynthetic process","type":"broad"}],"termid":"GO:0036001","terms_by_termid":{"GO:0036001":null}}


id: GO:0060279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of ovulation","termid":"GO:0060278"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovulation","termid":"GO:0060279"}


id: GO:1902227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:16705167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"down regulation of M-CSF signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"down-regulation of M-CSF signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"downregulation of M-CSF signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"inhibition of M-CSF signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"negative regulation of M-CSF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902227"}


id: GO:0043892
data:
  {"annotated_genes":["SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101153],"is_not":false,"summary":null,"term":"GO:0043892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactaldehyde + NADP+ = methylglyoxal + NADPH + H+.","definition_xrefs":["EC:1.1.1.283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.1.1.283-RXN","RHEA:21748"],"synonyms":[{"name":"Gre2","type":"related"},{"name":"lactaldehyde dehydrogenase (NADP+)","type":"exact"},{"name":"lactaldehyde:NADP+ oxidoreductase activity","type":"related"},{"name":"methylglyoxal reductase (NADPH-dependent) activity","type":"exact"}],"termid":"GO:0043892","terms_by_termid":{"GO:0043892":null}}


id: PBO:0054762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2174","termid":"PBO:0054762"}


id: PBO:0050129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 39","termid":"PBO:0050129"}


id: PBO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.1","termid":"PBO:0000965"}


id: GO:1902995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["GOC:sjp","GO_REF:0000058","PMID:12042316","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid efflux","termid":"GO:1902994"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid efflux","synonyms":[{"name":"activation of phospholipid efflux","type":"narrow"},{"name":"activation of phospholipid export","type":"narrow"},{"name":"positive regulation of phospholipid export","type":"exact"},{"name":"up regulation of phospholipid efflux","type":"exact"},{"name":"up regulation of phospholipid export","type":"exact"},{"name":"up-regulation of phospholipid efflux","type":"exact"},{"name":"up-regulation of phospholipid export","type":"exact"},{"name":"upregulation of phospholipid efflux","type":"exact"},{"name":"upregulation of phospholipid export","type":"exact"}],"termid":"GO:1902995"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["RHEA:16481","EC:2.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["KEGG_REACTION:R00075","MetaCyc:2.5.1.43-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: PBO:0029679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation","termid":"PBO:0029679"}


id: SO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together regulatory regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_fusion","synonyms":[{"name":"regulatory region fusion","type":"exact"}],"termid":"SO:0001887"}


id: FYPO:0007483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic spindle pole body duplication is abnormal during the first meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle pole body duplication","termid":"FYPO:0007258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body duplication during meiosis I","synonyms":[{"name":"abnormal meiotic SPB duplication during meiosis I","type":"exact"},{"name":"abnormal meiotic spindle pole body duplication during first meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body duplication during meiosis I","type":"exact"}],"termid":"FYPO:0007483"}


id: GO:0032050
data:
  {"annotated_genes":["SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72632],"is_not":false,"summary":null,"term":"GO:0032050"}]},"cv_name":"molecular_function","definition":"Binding to a clathrin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin binding","termid":"GO:0030276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"clathrin heavy chain binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032050","terms_by_termid":{"GO:0032050":null}}


id: PBO:0039420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 4","termid":"PBO:0039420"}


id: PR:Q9HE11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00869","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.01","secondary_identifiers":["UniProtKB:Q9HE11"],"synonyms":[{"name":"Spom972h-WDR43","type":"exact"},{"name":"U3 protein 5 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE11"}


id: PBO:0063622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, platelet","termid":"PBO:0063622"}


id: PBO:0059098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 4","termid":"PBO:0059098"}


id: PBO:0079681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3B","termid":"PBO:0079681"}


id: PBO:0081109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A divergent transcript","termid":"PBO:0081109"}


id: FYPO:0002082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased protein ubiquitination during vegetative growth","synonyms":[{"name":"increased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"increased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"increased protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002082"}


id: PBO:0065201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 31","termid":"PBO:0065201"}


id: PBO:0040399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1","termid":"PBO:0040399"}


id: PBO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase Lcf1","termid":"PBO:0003767"}


id: GO:0102240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galactose + soyasapogenol B 3-O-beta-glucuronate = H+ + UDP + soyasaponin III.","definition_xrefs":["GOC:pz","EC:2.4.1.272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"soyasapogenol B glucuronide galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12319","RHEA:31487"],"termid":"GO:0102240"}


id: PBO:0038743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 2","termid":"PBO:0038743"}


id: GO:0052477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of callose deposition performed by the symbiont as part of its defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont callose deposition (obsolete GO:0052477)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont callose deposition","type":"exact"},{"name":"suppression by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052477"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: PBO:0004185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit Cdc6","termid":"PBO:0004185"}


id: GO:0006774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin B12 reduction (obsolete GO:0006774)","synonyms":[{"name":"vitamin B12 reduction","type":"exact"}],"termid":"GO:0006774"}


id: GO:0061975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20679519","PMID:20097540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"articular cartilage development","synonyms":[{"name":"articular cartilage of joint development","type":"exact"}],"termid":"GO:0061975"}


id: PBO:0077860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 1","termid":"PBO:0077860"}


id: PBO:0067924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 226","termid":"PBO:0067924"}


id: PBO:0058427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4797","termid":"PBO:0058427"}


id: FYPO:0001626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular glycine level","termid":"FYPO:0001637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar glycine level","synonyms":[{"name":"normal level of glycine in vacuole","type":"exact"},{"name":"normal vacuolar glycine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar glycine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001626"}


